Query 029136
Match_columns 198
No_of_seqs 120 out of 142
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 12:58:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2drp_A Protein (tramtrack DNA- 97.1 0.00049 1.7E-08 44.3 4.2 54 21-74 9-65 (66)
2 2ct1_A Transcriptional repress 97.1 0.00046 1.6E-08 46.0 4.1 53 22-74 15-70 (77)
3 3uk3_C Zinc finger protein 217 96.4 0.0035 1.2E-07 38.9 3.9 51 22-74 4-57 (57)
4 2yt9_A Zinc finger-containing 96.3 0.0052 1.8E-07 41.6 4.4 51 22-74 7-60 (95)
5 2eod_A TNF receptor-associated 96.0 0.005 1.7E-07 40.0 3.3 47 21-70 9-58 (66)
6 1x5w_A Zinc finger protein 64, 95.9 0.0096 3.3E-07 38.7 4.3 52 21-74 8-62 (70)
7 1x6h_A Transcriptional repress 95.8 0.0093 3.2E-07 39.5 4.0 53 22-74 15-72 (86)
8 2kmk_A Zinc finger protein GFI 95.6 0.011 3.9E-07 38.6 3.7 47 23-71 2-51 (82)
9 2gqj_A Zinc finger protein KIA 95.6 0.004 1.4E-07 43.7 1.6 53 21-74 23-79 (98)
10 1x6e_A Zinc finger protein 24; 95.6 0.016 5.3E-07 38.0 4.3 50 22-73 14-66 (72)
11 2ctd_A Zinc finger protein 512 95.5 0.016 5.4E-07 41.4 4.4 49 22-73 34-86 (96)
12 2d9k_A FLN29 gene product; zin 95.4 0.0054 1.9E-07 42.2 1.6 48 21-71 16-64 (75)
13 1bbo_A Human enhancer-binding 95.3 0.018 6.1E-07 35.6 3.7 49 23-73 2-53 (57)
14 2ee8_A Protein ODD-skipped-rel 95.2 0.025 8.7E-07 39.0 4.5 52 20-73 15-69 (106)
15 2dmd_A Zinc finger protein 64, 95.1 0.02 6.9E-07 38.7 3.8 50 22-73 8-60 (96)
16 2adr_A ADR1; transcription reg 95.1 0.024 8.3E-07 35.4 3.8 50 22-73 2-54 (60)
17 2lce_A B-cell lymphoma 6 prote 95.1 0.029 9.9E-07 36.7 4.3 52 20-73 15-69 (74)
18 2d9h_A Zinc finger protein 692 94.9 0.019 6.5E-07 37.9 3.2 54 22-75 7-64 (78)
19 2yt9_A Zinc finger-containing 94.9 0.02 6.9E-07 38.6 3.4 53 22-74 35-90 (95)
20 1llm_C Chimera of ZIF23-GCN4; 94.9 0.03 1E-06 37.9 4.1 54 22-77 3-59 (88)
21 2wbt_A B-129; zinc finger; 2.7 94.8 0.032 1.1E-06 40.1 4.2 49 22-74 74-125 (129)
22 2dmd_A Zinc finger protein 64, 94.7 0.026 8.8E-07 38.2 3.5 50 22-73 36-88 (96)
23 2dlq_A GLI-kruppel family memb 94.7 0.033 1.1E-06 39.0 4.0 53 22-74 35-91 (124)
24 2ee8_A Protein ODD-skipped-rel 94.6 0.039 1.3E-06 38.0 4.2 51 21-73 44-97 (106)
25 1a1h_A QGSR zinc finger peptid 94.6 0.037 1.3E-06 36.8 4.0 48 22-71 4-56 (90)
26 2rpc_A Zinc finger protein ZIC 94.5 0.042 1.4E-06 40.4 4.5 56 18-73 21-86 (155)
27 2kmk_A Zinc finger protein GFI 94.5 0.042 1.4E-06 35.8 4.0 50 22-73 29-81 (82)
28 2cot_A Zinc finger protein 435 94.5 0.037 1.3E-06 36.5 3.7 51 21-73 17-70 (77)
29 2dlq_A GLI-kruppel family memb 94.5 0.043 1.5E-06 38.4 4.2 51 21-73 6-59 (124)
30 2csh_A Zinc finger protein 297 94.4 0.066 2.2E-06 37.2 5.1 53 22-76 37-92 (110)
31 2lv2_A Insulinoma-associated p 94.1 0.049 1.7E-06 38.8 3.9 52 21-74 27-81 (85)
32 2ej4_A Zinc finger protein ZIC 93.9 0.084 2.9E-06 35.6 4.6 51 22-72 25-85 (95)
33 1llm_C Chimera of ZIF23-GCN4; 93.8 0.014 4.7E-07 39.6 0.5 51 22-75 31-84 (88)
34 1ubd_C Protein (YY1 zinc finge 93.6 0.07 2.4E-06 37.7 3.9 48 22-72 5-57 (124)
35 2eps_A POZ-, at HOOK-, and zin 93.2 0.077 2.6E-06 33.1 3.2 39 21-60 11-50 (54)
36 2gli_A Protein (five-finger GL 92.9 0.048 1.6E-06 39.9 2.2 51 22-74 67-124 (155)
37 1wjp_A Zinc finger protein 295 92.4 0.11 3.7E-06 36.1 3.5 45 22-70 16-63 (107)
38 2epx_A Zinc finger protein 28 92.3 0.12 4.1E-06 30.5 3.2 35 22-57 12-47 (47)
39 2dlk_A Novel protein; ZF-C2H2 91.7 0.24 8.2E-06 32.2 4.3 51 22-73 7-64 (79)
40 2ytn_A Zinc finger protein 347 91.7 0.17 5.9E-06 29.9 3.3 34 22-57 12-46 (46)
41 2ebt_A Krueppel-like factor 5; 91.6 0.23 7.9E-06 33.5 4.3 54 19-74 12-72 (100)
42 2j7j_A Transcription factor II 91.5 0.2 6.7E-06 32.6 3.7 50 23-74 2-58 (85)
43 2ema_A Zinc finger protein 347 91.5 0.17 5.7E-06 30.0 3.1 34 22-57 12-46 (46)
44 4gzn_C ZFP-57, zinc finger pro 91.5 0.17 5.7E-06 33.8 3.4 48 22-71 4-54 (60)
45 2eq0_A Zinc finger protein 347 91.5 0.15 5.3E-06 30.1 2.9 34 22-57 12-46 (46)
46 1wjp_A Zinc finger protein 295 91.5 0.15 5E-06 35.5 3.2 49 22-73 42-93 (107)
47 2em0_A Zinc finger protein 224 91.4 0.2 6.8E-06 29.6 3.4 34 22-57 12-46 (46)
48 2epq_A POZ-, at HOOK-, and zin 91.4 0.11 3.9E-06 30.7 2.3 35 22-58 10-45 (45)
49 2ghf_A ZHX1, zinc fingers and 91.3 0.35 1.2E-05 35.4 5.3 48 22-69 18-70 (102)
50 1a1h_A QGSR zinc finger peptid 91.2 0.22 7.5E-06 32.9 3.8 51 21-73 33-86 (90)
51 2j7j_A Transcription factor II 91.1 0.19 6.4E-06 32.7 3.3 47 22-73 31-85 (85)
52 1f2i_G Fusion of N-terminal 17 91.1 0.2 6.7E-06 32.3 3.4 48 21-70 18-70 (73)
53 2ytk_A Zinc finger protein 347 90.9 0.19 6.6E-06 29.7 3.0 34 22-57 12-46 (46)
54 2eop_A Zinc finger protein 268 90.9 0.21 7E-06 29.5 3.1 34 22-57 12-46 (46)
55 2emy_A Zinc finger protein 268 90.8 0.2 6.7E-06 29.6 2.9 34 22-57 12-46 (46)
56 2wbs_A Krueppel-like factor 4; 90.8 0.25 8.5E-06 32.6 3.8 51 21-73 4-61 (89)
57 2el4_A Zinc finger protein 268 90.8 0.21 7.2E-06 29.4 3.0 34 22-57 12-46 (46)
58 2i13_A AART; DNA binding, zinc 90.7 0.18 6.2E-06 38.3 3.4 51 22-74 105-158 (190)
59 2gli_A Protein (five-finger GL 90.7 0.3 1E-05 35.6 4.4 52 22-73 3-63 (155)
60 2ene_A Zinc finger protein 347 90.6 0.21 7.1E-06 29.5 2.9 34 22-57 12-46 (46)
61 2eov_A Zinc finger protein 484 90.6 0.22 7.6E-06 29.3 3.0 34 22-57 12-46 (46)
62 2eoe_A Zinc finger protein 347 90.6 0.16 5.5E-06 29.9 2.4 34 22-57 12-46 (46)
63 2ep2_A Zinc finger protein 484 90.5 0.23 7.8E-06 29.3 3.1 34 22-57 12-46 (46)
64 2ytj_A Zinc finger protein 484 90.5 0.22 7.5E-06 29.4 2.9 34 22-57 12-46 (46)
65 2em5_A ZFP-95, zinc finger pro 90.5 0.22 7.7E-06 29.5 3.0 34 22-57 12-46 (46)
66 2dmi_A Teashirt homolog 3; zin 90.5 0.081 2.8E-06 37.0 1.1 50 22-71 19-74 (115)
67 2lt7_A Transcriptional regulat 90.4 0.21 7.2E-06 37.6 3.5 49 21-71 21-72 (133)
68 2emh_A Zinc finger protein 484 90.2 0.23 7.9E-06 29.3 2.8 34 22-57 12-46 (46)
69 2emf_A Zinc finger protein 484 90.1 0.27 9.2E-06 29.1 3.1 34 22-57 12-46 (46)
70 2emk_A Zinc finger protein 28 90.0 0.27 9.1E-06 29.1 3.0 34 22-57 12-46 (46)
71 2em9_A Zinc finger protein 224 89.8 0.31 1.1E-05 28.6 3.2 34 22-57 12-46 (46)
72 2en6_A Zinc finger protein 268 89.8 0.22 7.6E-06 29.4 2.5 34 22-57 12-46 (46)
73 2eme_A Zinc finger protein 473 89.7 0.31 1.1E-05 28.6 3.2 34 22-57 12-46 (46)
74 2wbs_A Krueppel-like factor 4; 89.6 0.36 1.2E-05 31.8 3.7 48 21-70 34-86 (89)
75 2enc_A Zinc finger protein 224 89.6 0.3 1E-05 28.8 3.0 34 22-57 12-46 (46)
76 2ytq_A Zinc finger protein 268 89.5 0.31 1.1E-05 28.8 3.1 34 22-57 12-46 (46)
77 2epw_A Zinc finger protein 268 89.5 0.26 8.8E-06 29.0 2.7 34 22-57 12-46 (46)
78 2i13_A AART; DNA binding, zinc 89.4 0.33 1.1E-05 36.8 3.9 20 23-42 50-70 (190)
79 2eoq_A Zinc finger protein 224 89.4 0.31 1.1E-05 28.7 3.0 34 22-57 12-46 (46)
80 2elz_A Zinc finger protein 224 89.4 0.39 1.3E-05 28.4 3.5 34 22-57 12-46 (46)
81 2em7_A Zinc finger protein 224 89.4 0.34 1.2E-05 28.6 3.2 34 22-57 12-46 (46)
82 2jp9_A Wilms tumor 1; DNA bind 89.3 0.39 1.3E-05 33.2 3.9 48 22-71 6-60 (119)
83 2ysl_A Tripartite motif-contai 89.3 0.13 4.4E-06 34.2 1.3 49 15-63 13-69 (73)
84 2epr_A POZ-, at HOOK-, and zin 89.2 0.29 1E-05 29.4 2.8 36 21-58 11-47 (48)
85 2ytm_A Zinc finger protein 28 89.2 0.26 9E-06 29.3 2.6 34 22-57 12-46 (46)
86 1tf6_A Protein (transcription 89.0 0.37 1.3E-05 36.5 3.9 49 23-71 73-128 (190)
87 2epz_A Zinc finger protein 28 89.0 0.35 1.2E-05 28.5 3.0 34 22-57 12-46 (46)
88 2ytd_A Zinc finger protein 473 88.9 0.35 1.2E-05 28.5 3.0 34 22-57 12-46 (46)
89 2eq4_A Zinc finger protein 224 88.9 0.33 1.1E-05 28.5 2.9 34 22-57 12-46 (46)
90 1wge_A Hypothetical protein 26 88.9 0.23 8E-06 36.6 2.6 45 9-62 16-63 (83)
91 2ysp_A Zinc finger protein 224 88.8 0.27 9.1E-06 29.0 2.4 34 22-57 12-46 (46)
92 2ep0_A Zinc finger protein 28 88.8 0.34 1.2E-05 28.5 2.9 34 22-57 12-46 (46)
93 2ely_A Zinc finger protein 224 88.8 0.29 1E-05 29.0 2.5 34 22-57 12-46 (46)
94 2eoo_A ZFP-95, zinc finger pro 88.7 0.34 1.2E-05 28.6 2.9 34 22-57 12-46 (46)
95 2en1_A Zinc finger protein 224 88.7 0.29 1E-05 28.8 2.5 34 22-57 12-46 (46)
96 2emm_A ZFP-95, zinc finger pro 88.6 0.39 1.3E-05 28.2 3.1 34 22-57 12-46 (46)
97 2emp_A Zinc finger protein 347 88.6 0.35 1.2E-05 28.5 2.8 34 22-57 12-46 (46)
98 2ytg_A ZFP-95, zinc finger pro 88.6 0.3 1E-05 28.8 2.5 34 22-57 12-46 (46)
99 2ytr_A Zinc finger protein 347 88.5 0.36 1.2E-05 28.3 2.8 34 22-57 12-46 (46)
100 2eml_A Zinc finger protein 28 88.3 0.49 1.7E-05 27.8 3.3 34 22-57 12-46 (46)
101 2jr7_A DPH3 homolog; DESR1, CS 88.2 0.17 5.9E-06 37.9 1.5 47 8-63 8-57 (89)
102 2ytt_A Zinc finger protein 473 88.1 0.27 9.3E-06 29.1 2.1 34 22-57 12-46 (46)
103 2emx_A Zinc finger protein 268 88.0 0.45 1.5E-05 27.7 3.0 34 22-57 10-44 (44)
104 2el6_A Zinc finger protein 268 87.9 0.49 1.7E-05 27.9 3.2 34 22-57 12-46 (46)
105 1ubd_C Protein (YY1 zinc finge 87.9 0.6 2E-05 32.7 4.1 52 21-74 33-89 (124)
106 2csh_A Zinc finger protein 297 87.6 0.45 1.5E-05 32.9 3.3 50 22-74 10-62 (110)
107 2en8_A Zinc finger protein 224 87.5 0.47 1.6E-05 27.8 2.9 34 22-57 12-46 (46)
108 1t1h_A Gspef-atpub14, armadill 87.4 0.2 7E-06 33.8 1.4 47 15-62 1-54 (78)
109 2ep3_A Zinc finger protein 484 87.3 0.48 1.7E-05 27.9 2.9 34 22-57 12-46 (46)
110 2yso_A ZFP-95, zinc finger pro 87.3 0.53 1.8E-05 27.7 3.0 34 22-57 12-46 (46)
111 2em8_A Zinc finger protein 224 86.9 0.52 1.8E-05 27.8 2.9 34 22-57 12-46 (46)
112 2yu8_A Zinc finger protein 347 86.8 0.42 1.4E-05 28.1 2.4 34 22-57 12-46 (46)
113 2dmi_A Teashirt homolog 3; zin 86.7 0.21 7.3E-06 34.9 1.1 52 20-73 48-104 (115)
114 2em2_A Zinc finger protein 28 86.6 0.61 2.1E-05 27.5 3.1 34 22-57 12-46 (46)
115 2kr4_A Ubiquitin conjugation f 86.1 0.89 3E-05 32.0 4.2 40 17-63 9-60 (85)
116 1yop_A KTI11P; zinc finger, me 85.5 0.46 1.6E-05 35.0 2.5 46 8-62 8-56 (83)
117 2ecj_A Tripartite motif-contai 85.5 0.34 1.2E-05 30.6 1.6 43 15-57 8-58 (58)
118 1zw8_A Zinc-responsive transcr 85.4 0.91 3.1E-05 30.6 3.8 51 23-73 2-64 (64)
119 1vd4_A Transcription initiatio 84.6 0.53 1.8E-05 30.2 2.2 35 22-60 14-48 (62)
120 2egp_A Tripartite motif-contai 84.4 0.26 8.8E-06 33.1 0.6 48 16-63 6-65 (79)
121 2jp9_A Wilms tumor 1; DNA bind 83.2 1.3 4.4E-05 30.5 3.9 51 22-74 36-91 (119)
122 2csy_A Zinc finger protein 183 83.0 0.18 6.1E-06 34.5 -0.6 48 14-63 7-61 (81)
123 1paa_A Yeast transcription fac 82.9 0.69 2.4E-05 24.2 1.9 26 22-47 2-28 (30)
124 2ecw_A Tripartite motif-contai 82.8 0.18 6.1E-06 33.9 -0.7 48 16-63 13-71 (85)
125 2ysj_A Tripartite motif-contai 82.7 0.33 1.1E-05 31.5 0.6 20 14-33 12-31 (63)
126 3ztg_A E3 ubiquitin-protein li 82.5 0.11 3.7E-06 36.2 -1.9 47 15-61 6-60 (92)
127 2lt7_A Transcriptional regulat 81.4 1.4 4.9E-05 32.9 3.8 51 22-74 50-103 (133)
128 2ebt_A Krueppel-like factor 5; 81.3 2.4 8.1E-05 28.3 4.6 49 22-72 45-98 (100)
129 2ecv_A Tripartite motif-contai 81.0 0.24 8.3E-06 33.2 -0.6 48 16-63 13-71 (85)
130 1tf6_A Protein (transcription 81.0 1.2 4.1E-05 33.7 3.3 51 22-74 104-161 (190)
131 2kre_A Ubiquitin conjugation f 80.9 1.6 5.6E-05 31.8 3.9 40 17-63 24-75 (100)
132 2ecy_A TNF receptor-associated 80.9 0.51 1.7E-05 30.9 1.0 47 16-63 9-62 (66)
133 2ect_A Ring finger protein 126 80.6 0.32 1.1E-05 32.8 -0.0 48 15-62 8-63 (78)
134 1wgm_A Ubiquitin conjugation f 80.2 1.6 5.4E-05 31.8 3.6 40 17-63 17-69 (98)
135 2epa_A Krueppel-like factor 10 79.6 2 6.7E-05 27.4 3.6 49 20-70 15-70 (72)
136 2rpc_A Zinc finger protein ZIC 79.6 1.6 5.3E-05 31.8 3.4 50 23-74 63-117 (155)
137 2y43_A E3 ubiquitin-protein li 79.4 0.32 1.1E-05 34.5 -0.4 46 16-63 16-69 (99)
138 2lv2_A Insulinoma-associated p 79.3 1.1 3.9E-05 31.6 2.5 29 22-50 56-85 (85)
139 1e4u_A Transcriptional repress 79.2 0.7 2.4E-05 32.5 1.3 45 18-63 7-62 (78)
140 1klr_A Zinc finger Y-chromosom 78.3 1.4 4.7E-05 22.7 2.1 23 23-45 3-26 (30)
141 2em3_A Zinc finger protein 28 78.2 1.8 6.2E-05 25.2 2.8 33 22-56 12-45 (46)
142 3mjh_B Early endosome antigen 78.2 1.4 4.8E-05 27.6 2.4 27 22-48 5-32 (34)
143 2yti_A Zinc finger protein 347 77.5 1.6 5.6E-05 25.4 2.5 33 22-56 12-45 (46)
144 2ea6_A Ring finger protein 4; 77.4 0.62 2.1E-05 30.1 0.6 47 16-62 9-67 (69)
145 2enf_A Zinc finger protein 347 77.4 1.9 6.5E-05 25.1 2.8 33 22-56 12-45 (46)
146 2l6l_A DNAJ homolog subfamily 77.2 0.37 1.3E-05 37.4 -0.7 53 7-69 96-151 (155)
147 2ep1_A Zinc finger protein 484 77.1 2.5 8.5E-05 24.5 3.2 33 22-56 12-45 (46)
148 2ct2_A Tripartite motif protei 75.1 1.7 5.9E-05 29.4 2.4 49 16-64 9-69 (88)
149 2emi_A Zinc finger protein 484 74.8 3 0.0001 24.2 3.2 33 22-56 12-45 (46)
150 2djb_A Polycomb group ring fin 74.8 0.5 1.7E-05 31.6 -0.4 47 15-63 8-62 (72)
151 1wir_A Protein arginine N-meth 74.2 2.1 7.3E-05 33.3 3.0 31 21-51 14-45 (121)
152 1x6h_A Transcriptional repress 73.8 2.5 8.7E-05 27.4 2.9 38 21-60 46-84 (86)
153 6rxn_A Rubredoxin; electron tr 73.7 1 3.5E-05 29.7 0.9 35 21-60 3-39 (46)
154 2f42_A STIP1 homology and U-bo 73.4 2.7 9.1E-05 34.4 3.5 43 15-63 99-153 (179)
155 2yts_A Zinc finger protein 484 73.3 3.5 0.00012 23.8 3.2 33 22-56 12-45 (46)
156 2eq2_A Zinc finger protein 347 73.1 3.5 0.00012 23.9 3.2 33 22-56 12-45 (46)
157 2yur_A Retinoblastoma-binding 73.1 0.49 1.7E-05 32.0 -0.8 46 15-60 8-61 (74)
158 3hcs_A TNF receptor-associated 73.0 2.1 7.1E-05 33.0 2.6 45 22-69 82-129 (170)
159 2dlk_A Novel protein; ZF-C2H2 72.7 3.1 0.00011 26.6 3.1 37 22-60 38-77 (79)
160 2en9_A Zinc finger protein 28 72.4 2.8 9.7E-05 24.4 2.6 33 22-56 12-45 (46)
161 2eow_A Zinc finger protein 347 72.3 3.2 0.00011 24.0 2.8 33 22-56 12-45 (46)
162 2emj_A Zinc finger protein 28 72.2 3.2 0.00011 24.2 2.9 33 22-56 12-45 (46)
163 2ct1_A Transcriptional repress 72.2 2.4 8.1E-05 27.5 2.4 29 21-49 44-73 (77)
164 2yth_A Zinc finger protein 224 71.4 4.4 0.00015 23.6 3.3 33 22-56 12-45 (46)
165 2em4_A Zinc finger protein 28 71.3 3.5 0.00012 24.0 2.9 33 22-56 12-45 (46)
166 2eor_A Zinc finger protein 224 71.3 3.3 0.00011 23.9 2.8 33 22-56 12-45 (46)
167 2elp_A Zinc finger protein 406 71.3 1.7 5.9E-05 24.1 1.4 22 22-43 9-32 (37)
168 2emg_A Zinc finger protein 484 71.1 3.6 0.00012 23.9 2.9 33 22-56 12-45 (46)
169 3flo_B DNA polymerase alpha ca 71.1 0.85 2.9E-05 38.3 0.0 56 20-78 20-77 (206)
170 3fl2_A E3 ubiquitin-protein li 70.9 0.35 1.2E-05 35.7 -2.2 45 18-63 48-99 (124)
171 2adr_A ADR1; transcription reg 70.7 3 0.0001 25.5 2.6 28 22-49 30-58 (60)
172 2ytf_A Zinc finger protein 268 70.6 3.7 0.00013 23.7 2.8 33 22-56 12-45 (46)
173 2el5_A Zinc finger protein 268 70.6 3.5 0.00012 23.4 2.7 32 22-55 10-42 (42)
174 2yrj_A Zinc finger protein 473 70.4 3.7 0.00013 23.7 2.8 33 22-56 12-45 (46)
175 1twf_L ABC10-alpha, DNA-direct 69.9 1.5 5.1E-05 31.2 1.1 31 19-61 25-55 (70)
176 2ctu_A Zinc finger protein 483 69.8 0.13 4.4E-06 32.7 -4.2 42 22-71 18-61 (73)
177 2eon_A ZFP-95, zinc finger pro 69.5 4.1 0.00014 23.8 2.9 33 22-56 12-45 (46)
178 2ytp_A Zinc finger protein 484 69.5 3.9 0.00013 23.8 2.8 33 22-56 12-45 (46)
179 1znf_A 31ST zinc finger from X 69.3 2.8 9.7E-05 21.1 1.9 20 23-42 2-22 (27)
180 2eq1_A Zinc finger protein 347 69.1 4.3 0.00015 23.5 2.9 33 22-56 12-45 (46)
181 2kiz_A E3 ubiquitin-protein li 68.1 0.46 1.6E-05 31.2 -1.8 48 16-63 8-63 (69)
182 2lcq_A Putative toxin VAPC6; P 68.0 1.4 4.7E-05 34.4 0.6 29 20-61 130-158 (165)
183 2epu_A Zinc finger protein 32; 67.8 3.7 0.00013 23.8 2.4 33 22-56 12-45 (45)
184 2yrm_A B-cell lymphoma 6 prote 67.7 5 0.00017 23.1 3.0 33 22-56 10-43 (43)
185 2eoz_A Zinc finger protein 473 67.4 3.9 0.00013 23.8 2.5 33 22-56 12-45 (46)
186 3htk_C E3 SUMO-protein ligase 67.3 1.5 5.3E-05 38.4 0.9 39 19-62 178-231 (267)
187 2d8t_A Dactylidin, ring finger 66.1 2.4 8.1E-05 28.1 1.4 46 19-66 12-64 (71)
188 2eoy_A Zinc finger protein 473 65.7 4.7 0.00016 23.4 2.6 34 22-56 12-46 (46)
189 2ep4_A Ring finger protein 24; 64.8 1.2 4.1E-05 29.5 -0.2 46 17-62 10-63 (74)
190 2ct5_A Zinc finger BED domain 64.5 3.1 0.00011 29.6 1.9 30 50-79 28-62 (73)
191 2eom_A ZFP-95, zinc finger pro 64.1 5.1 0.00018 23.4 2.6 33 22-56 12-45 (46)
192 3uk3_C Zinc finger protein 217 63.9 3.8 0.00013 24.6 2.0 24 22-45 32-56 (57)
193 2elu_A Zinc finger protein 406 63.8 3.2 0.00011 26.4 1.6 25 23-47 10-35 (37)
194 2em6_A Zinc finger protein 224 63.5 6.8 0.00023 22.7 3.0 33 22-56 12-45 (46)
195 1wii_A Hypothetical UPF0222 pr 63.2 2 6.9E-05 31.6 0.7 35 19-60 20-56 (85)
196 2emz_A ZFP-95, zinc finger pro 62.7 4.7 0.00016 23.4 2.2 33 22-56 12-45 (46)
197 2xeu_A Ring finger protein 4; 62.4 1.6 5.4E-05 27.7 -0.0 42 22-63 3-56 (64)
198 1z6u_A NP95-like ring finger p 61.9 0.7 2.4E-05 35.9 -2.1 46 18-64 74-126 (150)
199 1iym_A EL5; ring-H2 finger, ub 61.9 0.53 1.8E-05 29.5 -2.4 39 23-61 6-53 (55)
200 2eof_A Zinc finger protein 268 61.7 6.8 0.00023 22.2 2.8 32 22-55 12-44 (44)
201 2k5c_A Uncharacterized protein 61.6 2.3 8E-05 32.1 0.8 13 21-33 50-62 (95)
202 2ent_A Krueppel-like factor 15 61.5 7.2 0.00025 22.5 2.9 34 22-57 12-48 (48)
203 2kvf_A Zinc finger and BTB dom 61.0 3.7 0.00013 20.9 1.3 21 22-42 3-24 (28)
204 2d9h_A Zinc finger protein 692 60.8 8.2 0.00028 24.8 3.3 29 21-49 37-66 (78)
205 2c2l_A CHIP, carboxy terminus 60.5 7 0.00024 31.4 3.5 41 17-63 203-255 (281)
206 1ard_A Yeast transcription fac 60.5 5.7 0.00019 20.1 2.1 21 23-43 3-24 (29)
207 2drp_A Protein (tramtrack DNA- 59.8 4.8 0.00016 25.0 1.9 26 21-46 39-65 (66)
208 2enh_A Zinc finger protein 28 59.3 6.7 0.00023 22.7 2.5 32 22-55 12-44 (46)
209 2m0f_A Zinc finger and BTB dom 59.2 5.5 0.00019 20.1 1.8 22 22-43 2-24 (29)
210 2lvu_A Zinc finger and BTB dom 62.7 2.1 7.2E-05 21.7 0.0 20 23-42 3-23 (26)
211 2lvt_A Zinc finger and BTB dom 62.7 2.1 7.2E-05 22.2 0.0 20 23-42 3-23 (29)
212 2eoh_A Zinc finger protein 28 58.0 8.4 0.00029 22.3 2.7 32 22-55 12-44 (46)
213 2els_A Zinc finger protein 406 58.0 5.9 0.0002 21.6 2.0 23 21-43 8-31 (36)
214 1jm7_A BRCA1, breast cancer ty 57.9 0.87 3E-05 32.4 -2.1 47 17-63 16-70 (112)
215 2en7_A Zinc finger protein 268 57.6 9.2 0.00031 21.6 2.8 32 22-55 12-44 (44)
216 3iuf_A Zinc finger protein UBI 57.4 6.2 0.00021 23.7 2.1 28 23-50 8-36 (48)
217 3lrq_A E3 ubiquitin-protein li 57.1 0.77 2.6E-05 32.9 -2.5 46 17-63 17-70 (100)
218 1x5w_A Zinc finger protein 64, 57.0 7.6 0.00026 24.5 2.6 27 22-48 37-64 (70)
219 1rik_A E6APC1 peptide; E6-bind 56.8 6.1 0.00021 20.0 1.8 21 23-43 3-24 (29)
220 3l11_A E3 ubiquitin-protein li 56.8 2.9 9.8E-05 30.2 0.5 46 17-63 10-62 (115)
221 2ckl_A Polycomb group ring fin 56.7 1.5 5.1E-05 31.5 -1.0 45 17-63 10-62 (108)
222 2yto_A Zinc finger protein 484 56.6 8.8 0.0003 22.2 2.7 32 22-55 12-44 (46)
223 2m0d_A Zinc finger and BTB dom 56.3 6.9 0.00024 19.7 1.9 22 22-43 3-25 (30)
224 2m0e_A Zinc finger and BTB dom 56.2 5.3 0.00018 20.0 1.4 20 23-42 3-23 (29)
225 2ecn_A Ring finger protein 141 56.1 2 6.7E-05 28.2 -0.4 44 17-62 10-59 (70)
226 2emb_A Zinc finger protein 473 55.3 11 0.00039 21.4 3.0 32 22-55 12-44 (44)
227 1p7a_A BF3, BKLF, kruppel-like 54.5 9 0.00031 20.8 2.3 22 22-43 11-33 (37)
228 2yte_A Zinc finger protein 473 54.4 12 0.00041 20.9 3.0 24 22-46 10-34 (42)
229 2kvh_A Zinc finger and BTB dom 54.2 7.7 0.00026 19.6 1.9 21 22-42 3-24 (27)
230 2elx_A Zinc finger protein 406 53.4 8 0.00027 20.6 2.0 22 22-43 7-29 (35)
231 2elm_A Zinc finger protein 406 53.4 8.8 0.0003 21.3 2.2 25 22-46 9-34 (37)
232 2djr_A Zinc finger BED domain- 53.3 3.4 0.00012 29.7 0.5 16 63-78 49-64 (76)
233 2eq3_A Zinc finger protein 347 53.3 9.3 0.00032 21.9 2.4 32 22-55 12-44 (46)
234 2elt_A Zinc finger protein 406 51.6 9 0.00031 20.6 2.0 22 22-43 9-31 (36)
235 2elo_A Zinc finger protein 406 51.4 7.1 0.00024 21.3 1.6 22 22-43 9-31 (37)
236 1srk_A Zinc finger protein ZFP 51.4 10 0.00035 20.3 2.2 22 22-43 7-29 (35)
237 2l0b_A E3 ubiquitin-protein li 51.3 1.1 3.8E-05 31.5 -2.4 44 19-62 37-88 (91)
238 1vq8_Z 50S ribosomal protein L 51.1 4.2 0.00014 29.7 0.6 30 19-61 24-55 (83)
239 1rmd_A RAG1; V(D)J recombinati 50.6 1.5 5.2E-05 31.7 -1.8 47 16-63 17-70 (116)
240 4ayb_P DNA-directed RNA polyme 50.3 6.3 0.00021 26.6 1.3 12 19-30 20-31 (48)
241 2eou_A Zinc finger protein 473 50.2 15 0.0005 21.0 2.9 22 22-43 12-34 (44)
242 2yuc_A TNF receptor-associated 50.2 10 0.00035 25.4 2.4 47 21-69 15-63 (76)
243 1e8j_A Rubredoxin; iron-sulfur 50.0 6.9 0.00023 26.1 1.5 7 53-59 38-44 (52)
244 2yu5_A Zinc finger protein 473 49.0 12 0.0004 21.3 2.3 22 22-43 12-34 (44)
245 2eoj_A Zinc finger protein 268 48.9 11 0.00038 21.3 2.2 32 22-55 12-44 (44)
246 2elq_A Zinc finger protein 406 48.8 9.9 0.00034 20.6 1.9 22 22-43 9-31 (36)
247 3jyw_9 60S ribosomal protein L 48.6 3.2 0.00011 29.9 -0.3 14 17-30 21-34 (72)
248 2kdx_A HYPA, hydrogenase/ureas 48.5 6.8 0.00023 29.2 1.5 30 18-60 69-99 (119)
249 3ng2_A RNF4, snurf, ring finge 48.4 1.7 5.9E-05 28.3 -1.7 40 22-63 10-63 (71)
250 1bor_A Transcription factor PM 48.2 4.7 0.00016 25.8 0.5 41 22-62 6-48 (56)
251 3j21_i 50S ribosomal protein L 48.2 3.3 0.00011 30.6 -0.3 14 17-30 30-43 (83)
252 3hct_A TNF receptor-associated 48.0 18 0.00062 26.1 3.7 47 16-63 12-65 (118)
253 1x4j_A Ring finger protein 38; 48.0 1.3 4.5E-05 29.6 -2.4 43 20-62 21-71 (75)
254 1wim_A KIAA0161 protein; ring 47.8 5.6 0.00019 27.8 0.9 48 22-69 5-72 (94)
255 1ffk_W Ribosomal protein L37AE 47.2 3.6 0.00012 29.6 -0.3 14 17-30 22-35 (73)
256 1v87_A Deltex protein 2; ring- 46.5 1.4 4.8E-05 31.6 -2.5 12 23-34 26-37 (114)
257 2lvr_A Zinc finger and BTB dom 51.2 4.5 0.00015 20.7 0.0 21 22-42 3-24 (30)
258 2en3_A ZFP-95, zinc finger pro 45.0 12 0.00042 21.4 2.0 22 22-43 12-34 (46)
259 2ytb_A Zinc finger protein 32; 44.4 20 0.00067 19.9 2.8 21 22-42 11-32 (42)
260 2kvg_A Zinc finger and BTB dom 44.4 10 0.00034 19.4 1.4 21 22-42 3-24 (27)
261 2czr_A TBP-interacting protein 44.3 8.1 0.00028 33.0 1.4 25 19-43 151-175 (226)
262 2elr_A Zinc finger protein 406 44.2 14 0.00048 19.7 2.1 22 22-43 9-31 (36)
263 2a25_A Ubiquitin ligase SIAH1; 43.6 8.6 0.00029 31.1 1.4 51 22-75 6-65 (193)
264 3iz5_m 60S ribosomal protein L 43.1 4.4 0.00015 30.5 -0.3 15 17-31 31-45 (92)
265 1rim_A E6APC2 peptide; E6-bind 42.8 14 0.00048 20.0 1.9 20 23-42 3-23 (33)
266 3izc_m 60S ribosomal protein R 42.7 4.4 0.00015 30.5 -0.4 14 17-30 31-44 (92)
267 2ckl_B Ubiquitin ligase protei 42.2 1.2 4.1E-05 34.3 -3.7 45 17-62 49-101 (165)
268 3knv_A TNF receptor-associated 41.7 3.3 0.00011 31.8 -1.3 44 17-61 26-76 (141)
269 2elv_A Zinc finger protein 406 40.8 15 0.00051 19.8 1.8 22 22-43 9-31 (36)
270 1g25_A CDK-activating kinase a 40.8 3.4 0.00012 26.8 -1.2 41 22-63 3-55 (65)
271 2i5o_A DNA polymerase ETA; zin 39.9 11 0.00039 23.9 1.3 22 21-42 8-29 (39)
272 2ept_A Zinc finger protein 32; 39.0 19 0.00064 20.1 2.1 24 22-46 10-34 (41)
273 4a17_Y RPL37A, 60S ribosomal p 38.7 8.5 0.00029 29.5 0.7 13 18-30 32-44 (103)
274 2l7x_A Envelope glycoprotein; 38.5 8.7 0.0003 28.1 0.6 20 22-41 30-49 (77)
275 1jm7_B BARD1, BRCA1-associated 38.1 2.6 9E-05 30.7 -2.2 46 17-62 17-66 (117)
276 2jvm_A Uncharacterized protein 37.8 9.7 0.00033 28.0 0.8 13 22-34 53-65 (80)
277 2e72_A POGO transposable eleme 37.5 16 0.00055 24.7 1.8 22 21-42 11-33 (49)
278 2epv_A Zinc finger protein 268 36.8 22 0.00075 20.3 2.2 22 22-43 12-34 (44)
279 1njq_A Superman protein; zinc- 36.8 20 0.00069 19.8 2.0 22 22-43 6-28 (39)
280 1yk4_A Rubredoxin, RD; electro 36.6 11 0.00036 25.2 0.8 10 19-28 32-41 (52)
281 2ghf_A ZHX1, zinc fingers and 36.6 14 0.00049 26.6 1.6 38 22-60 50-88 (102)
282 2kfq_A FP1; protein, de novo p 36.5 16 0.00055 19.5 1.4 19 23-41 3-22 (32)
283 3mv2_A Coatomer subunit alpha; 35.8 13 0.00046 33.2 1.6 33 21-66 286-319 (325)
284 2en2_A B-cell lymphoma 6 prote 35.5 20 0.00067 20.0 1.8 24 22-46 11-35 (42)
285 3cc2_Z 50S ribosomal protein L 35.3 10 0.00036 29.6 0.7 33 18-62 56-89 (116)
286 3mkr_B Coatomer subunit alpha; 35.0 13 0.00046 33.1 1.4 34 21-67 277-311 (320)
287 2eos_A B-cell lymphoma 6 prote 34.8 23 0.00077 19.8 2.0 22 22-43 11-33 (42)
288 2jrr_A Uncharacterized protein 34.3 10 0.00034 26.9 0.4 11 22-32 40-50 (67)
289 2kn9_A Rubredoxin; metalloprot 34.2 12 0.00043 27.3 0.9 40 21-60 26-69 (81)
290 2ea5_A Cell growth regulator w 34.2 4.3 0.00015 27.4 -1.5 41 21-62 14-57 (68)
291 4ayc_A E3 ubiquitin-protein li 34.0 1.9 6.7E-05 32.4 -3.6 42 19-62 50-98 (138)
292 2epc_A Zinc finger protein 32; 34.0 24 0.00083 19.5 2.0 22 22-43 11-33 (42)
293 4ic3_A E3 ubiquitin-protein li 33.5 4.3 0.00015 27.5 -1.6 40 17-62 19-66 (74)
294 2v3b_B Rubredoxin 2, rubredoxi 33.4 13 0.00043 25.1 0.7 7 53-59 38-44 (55)
295 2akl_A PHNA-like protein PA012 32.8 13 0.00044 29.9 0.8 28 21-60 26-53 (138)
296 1l8d_A DNA double-strand break 32.7 11 0.00037 27.3 0.4 10 24-33 49-58 (112)
297 1dx8_A Rubredoxin; electron tr 32.3 15 0.0005 25.9 1.0 40 21-60 6-49 (70)
298 3fz5_A Possible 2-hydroxychrom 32.0 4.8 0.00017 31.5 -1.8 33 159-193 152-184 (202)
299 1yui_A GAGA-factor; complex (D 31.6 26 0.00088 21.0 2.0 22 22-43 24-46 (54)
300 2epp_A POZ-, at HOOK-, and zin 31.2 37 0.0013 22.8 2.9 21 23-43 14-35 (66)
301 2hf1_A Tetraacyldisaccharide-1 31.1 13 0.00043 26.1 0.5 34 16-60 2-35 (68)
302 2imf_A HCCA isomerase, 2-hydro 31.0 5.1 0.00018 31.1 -1.8 33 161-195 148-180 (203)
303 3vhs_A ATPase wrnip1; zinc fin 30.6 21 0.00071 21.6 1.3 19 51-69 6-25 (29)
304 4a0k_B E3 ubiquitin-protein li 30.4 11 0.00037 28.7 0.0 37 24-60 50-109 (117)
305 2ecg_A Baculoviral IAP repeat- 30.3 3.1 0.00011 28.1 -2.7 46 17-63 20-68 (75)
306 2jr6_A UPF0434 protein NMA0874 30.2 13 0.00043 26.1 0.3 34 16-60 2-35 (68)
307 4dvc_A Thiol:disulfide interch 30.2 6.2 0.00021 29.1 -1.4 10 21-30 29-38 (184)
308 4ap4_A E3 ubiquitin ligase RNF 30.2 11 0.00036 26.9 -0.0 36 22-62 48-83 (133)
309 3a43_A HYPD, hydrogenase nicke 30.1 12 0.00043 28.9 0.3 18 18-35 66-83 (139)
310 2ecm_A Ring finger and CHY zin 30.1 29 0.00098 21.1 2.0 10 52-61 44-53 (55)
311 1r4w_A Glutathione S-transfera 30.0 5.5 0.00019 31.6 -1.8 30 158-189 160-189 (226)
312 1chc_A Equine herpes virus-1 r 29.9 6.6 0.00023 25.3 -1.1 40 23-62 6-51 (68)
313 2js4_A UPF0434 protein BB2007; 29.7 12 0.00042 26.3 0.2 34 16-60 2-35 (70)
314 1s24_A Rubredoxin 2; electron 29.2 16 0.00055 27.0 0.8 7 53-59 70-76 (87)
315 3gl5_A Putative DSBA oxidoredu 28.9 6.2 0.00021 32.2 -1.7 13 18-30 6-18 (239)
316 3rpp_A Glutathione S-transfera 27.8 6.5 0.00022 31.9 -1.8 29 158-188 160-188 (234)
317 2in3_A Hypothetical protein; D 26.1 7 0.00024 30.1 -1.8 12 19-30 12-23 (216)
318 3dpl_R Ring-box protein 1; ubi 26.1 5.7 0.0002 29.4 -2.2 23 38-60 73-98 (106)
319 2pk7_A Uncharacterized protein 25.9 14 0.00049 25.9 0.0 34 16-60 2-35 (69)
320 2eox_A Zinc finger protein 473 25.9 22 0.00077 20.1 0.9 22 22-43 12-34 (44)
321 4rxn_A Rubredoxin; electron tr 24.5 25 0.00084 23.7 1.0 12 22-33 3-14 (54)
322 2znm_A Thiol:disulfide interch 24.3 33 0.0011 25.8 1.8 18 159-176 168-185 (195)
323 3kzq_A Putative uncharacterize 24.3 8 0.00027 30.1 -1.8 23 18-40 6-29 (208)
324 2ecl_A Ring-box protein 2; RNF 24.2 5.4 0.00018 27.4 -2.5 11 51-61 64-74 (81)
325 2jny_A Uncharacterized BCR; st 24.0 19 0.00066 25.2 0.4 34 15-59 3-36 (67)
326 3bci_A Disulfide bond protein 23.2 9.1 0.00031 29.0 -1.6 12 19-30 17-28 (186)
327 2yu4_A E3 SUMO-protein ligase 23.2 75 0.0026 22.1 3.4 32 28-60 26-59 (94)
328 2bai_A Genome polyprotein; zin 23.1 11 0.00036 23.5 -1.0 9 52-60 17-25 (32)
329 1sp2_A SP1F2; zinc finger, tra 23.0 52 0.0018 16.8 2.0 21 23-43 3-26 (31)
330 3pih_A Uvrabc system protein A 22.0 32 0.0011 34.3 1.7 37 19-60 246-282 (916)
331 1rpq_W Peptide E131; receptor- 21.4 9.1 0.00031 22.6 -1.4 6 25-30 3-9 (26)
332 2jvx_A NF-kappa-B essential mo 21.3 55 0.0019 19.4 2.0 20 22-41 3-23 (28)
333 3gha_A Disulfide bond formatio 21.1 10 0.00035 30.0 -1.8 10 21-30 37-46 (202)
334 3mwm_A ZUR, putative metal upt 20.9 40 0.0014 25.3 1.6 41 21-61 86-137 (139)
335 2ab3_A ZNF29; zinc finger prot 20.7 58 0.002 15.9 1.8 20 23-42 3-25 (29)
336 3i1m_R 30S ribosomal protein S 20.7 23 0.00078 25.4 0.2 31 47-77 4-40 (75)
337 3mhs_C SAGA-associated factor 20.6 35 0.0012 25.9 1.2 26 18-43 66-91 (99)
338 3h0g_L DNA-directed RNA polyme 20.4 39 0.0013 23.5 1.3 29 21-61 20-48 (63)
339 3gn3_A Putative protein-disulf 20.3 13 0.00043 29.2 -1.4 20 173-192 145-164 (182)
No 1
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.13 E-value=0.00049 Score=44.26 Aligned_cols=54 Identities=20% Similarity=0.483 Sum_probs=44.4
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
..|.|+.|+..| ....|..|....|....++-.|++|...- ..++..|++..|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 359999999866 46789999998887677889999999864 4689999987775
No 2
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.13 E-value=0.00046 Score=45.99 Aligned_cols=53 Identities=21% Similarity=0.472 Sum_probs=43.8
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+...|..+.+.-.|++|...- ..++..|++..|+
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 70 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence 49999998855 56889999998898777888999999864 4689999977774
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=96.41 E-value=0.0035 Score=38.89 Aligned_cols=51 Identities=20% Similarity=0.308 Sum_probs=38.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccc--hhhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~--v~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|... -..++..|++..|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 59999999855 56779999875 433 456889999986 34689999987764
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.26 E-value=0.0052 Score=41.62 Aligned_cols=51 Identities=18% Similarity=0.335 Sum_probs=30.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...- ..++..|++..|+
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 47777777654 45567777664 322 3456677777653 3467777765544
No 5
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.03 E-value=0.005 Score=40.01 Aligned_cols=47 Identities=26% Similarity=0.492 Sum_probs=38.3
Q ss_pred eeecCCCCccchhHHHHHhhhhhhccCCccccccc-ccccc--hhhhHhhhHh
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCP-LCAAN--LGKDAAEHFM 70 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCP-VCa~~--v~~d~v~Hit 70 (198)
-.|.|++|+..|....|..|... ...++..|+ .|... ...++..|++
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~ 58 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLK 58 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHH
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHH
Confidence 46999999998888889999876 556788999 99885 3458888884
No 6
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.93 E-value=0.0096 Score=38.71 Aligned_cols=52 Identities=17% Similarity=0.319 Sum_probs=39.7
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++|...- ..++..|++..|+
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~ 62 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHG 62 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence 359999998855 46778999876 644 4568999999874 3689999876664
No 7
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.84 E-value=0.0093 Score=39.51 Aligned_cols=53 Identities=17% Similarity=0.327 Sum_probs=40.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCC--cccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFE--MKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e--~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+...|..+ .+.-.|++|...- ..++..|++..|+
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~ 72 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG 72 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccC
Confidence 49999998855 5667899998877654 3668999999864 3688888865443
No 8
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.61 E-value=0.011 Score=38.60 Aligned_cols=47 Identities=19% Similarity=0.520 Sum_probs=23.6
Q ss_pred ecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhh
Q 029136 23 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMV 71 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~ 71 (198)
|.|+.|+..| ....|..|+...+ ..+.-.|++|...- ..++..|++.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~ 51 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFI 51 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred ccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHH
Confidence 5566665533 3445556655422 12345566665542 2455555543
No 9
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.60 E-value=0.004 Score=43.73 Aligned_cols=53 Identities=17% Similarity=0.281 Sum_probs=40.5
Q ss_pred eeecCCCCccch--hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 21 ACFPCPFCYLEI--EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 21 ~~F~CPfC~e~f--D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
..|.|+.|+..| ....|..|+...|. ..+.-.|++|...- ..++..|++..|+
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~-~~~~~~C~~C~k~F~~~~~L~~H~~~h~~ 79 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQK-LQDALKCQHCRKQFKSKAGLNYHTMAEHS 79 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHHH-HHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHcC-CCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence 359999999877 57889999976543 24567999999864 3688999866664
No 10
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.58 E-value=0.016 Score=38.00 Aligned_cols=50 Identities=16% Similarity=0.301 Sum_probs=37.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
.|.|++|+..| ....|..|+.. |.. .++-.|++|...- ..++..|+++.+
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcC
Confidence 59999998855 56778899875 433 4668999999864 358888886543
No 11
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.50 E-value=0.016 Score=41.36 Aligned_cols=49 Identities=20% Similarity=0.384 Sum_probs=38.9
Q ss_pred eecCCCCccch--hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI--EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f--D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
.|.|+.|+..| ....|..|+.. | ..++-.|++|...- ..++..|+..-|
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H 86 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANH 86 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence 59999999988 78899999865 5 56788999999874 368888853344
No 12
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.38 E-value=0.0054 Score=42.17 Aligned_cols=48 Identities=27% Similarity=0.445 Sum_probs=39.4
Q ss_pred eeecCCCCccchhHHHHHhhhhhhccCCcccccccccccchh-hhHhhhHhh
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG-KDAAEHFMV 71 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~-~d~v~Hit~ 71 (198)
-.+.|+||+..|-...|-.|. .|+- .++..||.|...+. .+|..|+.+
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHH
T ss_pred cccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHH
Confidence 359999999999999999998 5765 57789999998644 688888853
No 13
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=95.31 E-value=0.018 Score=35.57 Aligned_cols=49 Identities=16% Similarity=0.444 Sum_probs=36.9
Q ss_pred ecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 23 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
|.|+.|+..| ....|..|+.. |.. .++-.|++|...- ..++..|++..|
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~ 53 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKA 53 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhc
Confidence 8899999865 56778999876 433 4667899999864 368888886544
No 14
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.19 E-value=0.025 Score=39.03 Aligned_cols=52 Identities=17% Similarity=0.376 Sum_probs=37.7
Q ss_pred ceeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 20 KACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 20 r~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
...|.|++|+..| ....|..|+...+. .+.-.|++|...- ..++..|++..+
T Consensus 15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~ 69 (106)
T 2ee8_A 15 KKEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHS 69 (106)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSC
T ss_pred CcCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhC
Confidence 3469999998866 56778889875442 3567899998864 358888886544
No 15
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.14 E-value=0.02 Score=38.71 Aligned_cols=50 Identities=14% Similarity=0.300 Sum_probs=35.8
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
.|.|+.|+..| ....|..|+...+. .+.-.|++|...- ..++..|++..+
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~ 60 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRIHS 60 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred CeECCCCCCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHHHHhC
Confidence 48999998865 56678889875432 3567899998864 358888886533
No 16
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=95.08 E-value=0.024 Score=35.42 Aligned_cols=50 Identities=22% Similarity=0.371 Sum_probs=37.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccchh--hhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~--~d~v~Hit~qH 73 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|...-. .++..|+...|
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H 54 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIH 54 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHc
Confidence 48999998865 56789999876 543 46678999998743 58888874444
No 17
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.07 E-value=0.029 Score=36.74 Aligned_cols=52 Identities=19% Similarity=0.330 Sum_probs=38.5
Q ss_pred ceeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 20 KACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 20 r~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
...|.|+.|+..| ....|..|+.. |.. .+.-.|++|...- ..++..|+++.+
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~ 69 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHS 69 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcC
Confidence 3569999999866 46778899865 443 3567899999864 468888986543
No 18
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.94 E-value=0.019 Score=37.90 Aligned_cols=54 Identities=15% Similarity=0.297 Sum_probs=40.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccC-Ccccccccccccch--hhhHhhhHhhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCF-EMKNAVCPLCAANL--GKDAAEHFMVQHAS 75 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~-e~k~vVCPVCa~~v--~~d~v~Hit~qH~~ 75 (198)
.|.|+.|+..| ....|..|+...+.. ..+.-.|++|...- ..++..|++..|..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~ 64 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 59999999865 467789998765432 24678999999874 36888898666654
No 19
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.93 E-value=0.02 Score=38.64 Aligned_cols=53 Identities=19% Similarity=0.423 Sum_probs=41.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+...|....+.-.|++|...- ..++..|+...|.
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 35 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence 59999998855 56789999987665545788999999864 3588999865554
No 20
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=94.88 E-value=0.03 Score=37.86 Aligned_cols=54 Identities=20% Similarity=0.507 Sum_probs=39.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHASSL 77 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~~~~ 77 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|...- ..++..|+...|+..+
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~ 59 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPI 59 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcc
Confidence 48899998855 56778888875 543 3557899998863 3688899988886444
No 21
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=94.76 E-value=0.032 Score=40.10 Aligned_cols=49 Identities=24% Similarity=0.648 Sum_probs=34.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+.. | .++-.|++|...- ..++..|++..|+
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 48888888755 44567788765 4 4556888888763 3578888876665
No 22
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.71 E-value=0.026 Score=38.17 Aligned_cols=50 Identities=16% Similarity=0.361 Sum_probs=37.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...- ..++..|+++.|
T Consensus 36 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~ 88 (96)
T 2dmd_A 36 PYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHT 88 (96)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred CEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhc
Confidence 59999998855 56788999876 433 4568899999863 468888886544
No 23
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.66 E-value=0.033 Score=39.01 Aligned_cols=53 Identities=15% Similarity=0.300 Sum_probs=37.9
Q ss_pred eecCCCCccch-hHHHHHhhhhhhcc-CCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHC-FEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~-~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+...|. ...+.-.|++|...- ..++..|++..++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 58999998744 67788899887543 234567899998863 3588888865443
No 24
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.61 E-value=0.039 Score=38.05 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=37.6
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++|...- ..++..|+++.+
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~ 97 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHM 97 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred CCcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhC
Confidence 359999998865 66789999765 433 4567899999864 358888885443
No 25
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=94.60 E-value=0.037 Score=36.84 Aligned_cols=48 Identities=19% Similarity=0.487 Sum_probs=25.7
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhh
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMV 71 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~ 71 (198)
.|.||+ |+..| ....|..|+...+. .+.-.|++|...- ..++..|+..
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~ 56 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRT 56 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHH
Confidence 366663 66644 34556666654322 2445677766642 2466666653
No 26
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=94.52 E-value=0.042 Score=40.40 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=42.1
Q ss_pred CcceeecCCCCccch-hHHHHHhhhhhhccCCccc-------ccccccccch--hhhHhhhHhhhh
Q 029136 18 DVKACFPCPFCYLEI-EAHMICSHLQEEHCFEMKN-------AVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 18 d~r~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~-------vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
+-...|+|+.|+..| ....|..|+...|..+... -.|++|...- ..++..|+.+.+
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 86 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHH
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcC
Confidence 344579999999866 5778999999989876432 4799998864 358888986543
No 27
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=94.49 E-value=0.042 Score=35.80 Aligned_cols=50 Identities=16% Similarity=0.359 Sum_probs=38.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
.|.|+.|+..| ....|..|+...+. .+.-.|++|...- ..++..|+++.+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 59999998855 67789999875443 3668899999864 368999986544
No 28
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.45 E-value=0.037 Score=36.46 Aligned_cols=51 Identities=18% Similarity=0.294 Sum_probs=38.0
Q ss_pred eeecCCCCccchh-HHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 21 ACFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 21 ~~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
..|.|+.|+..|. ...|..|+.. |.. .++-.|++|...- ..++..|+++.+
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~ 70 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHT 70 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhC
Confidence 4699999998664 6778999875 443 4668999999863 468888886543
No 29
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.45 E-value=0.043 Score=38.36 Aligned_cols=51 Identities=20% Similarity=0.331 Sum_probs=36.9
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
..|.||.|+..| ....|..|+...+. .++-.|++|...- ..++..|+...|
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~ 59 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNRKHTG--EKPFECPKCGKCYFRKENLLEHEARNC 59 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHHHHSS--CCSCBCTTTCCBCSSHHHHHHHHHHCC
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHhCCC--CCCeECCCCCchhcCHHHHHHHHhhhh
Confidence 358999998865 57788889875442 3567899998863 468888886543
No 30
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.41 E-value=0.066 Score=37.25 Aligned_cols=53 Identities=19% Similarity=0.347 Sum_probs=30.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHASS 76 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~~~ 76 (198)
.|.|++|+..| ....|..|+...+ . .+.-.|++|...- ..++..|++..|...
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~ 92 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKIHT-G-IKPYECNICAKRFMWRDSFHRHVTSCTKSY 92 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTTTC-C-CCCEECSSSCCEESCHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHcC-C-CCCeeCCCCcchhcCHHHHHHHHHHccccc
Confidence 37777776643 3456666765432 2 2445677777653 356777776655443
No 31
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.07 E-value=0.049 Score=38.83 Aligned_cols=52 Identities=23% Similarity=0.406 Sum_probs=40.1
Q ss_pred eeecCCCCccchh-HHHHHhhhhhhccCCcccccccccccc--hhhhHhhhHhhhhh
Q 029136 21 ACFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMVQHA 74 (198)
Q Consensus 21 ~~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVCa~~--v~~d~v~Hit~qH~ 74 (198)
..|.||.|+..|. ...|..|+...| ..++-.|++|... -..++..|+...|.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~~H~ 81 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLH--AAQVFPCKYCPATFYSSPGLTRHINKCHP 81 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTS--CSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhcc--CCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence 3599999999664 678999987644 3467899999987 44699999866564
No 32
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.87 E-value=0.084 Score=35.62 Aligned_cols=51 Identities=20% Similarity=0.290 Sum_probs=38.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccc-------ccccccccch--hhhHhhhHhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKN-------AVCPLCAANL--GKDAAEHFMVQ 72 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~-------vVCPVCa~~v--~~d~v~Hit~q 72 (198)
.|+|+.|+..| ....|..|+...|..+... -.|++|...- ..++..|+++.
T Consensus 25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H 85 (95)
T 2ej4_A 25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85 (95)
T ss_dssp SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc
Confidence 47899998865 5678999998777665321 5899999874 36888998653
No 33
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.81 E-value=0.014 Score=39.56 Aligned_cols=51 Identities=12% Similarity=0.084 Sum_probs=41.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccchh--hhHhhhHhhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHAS 75 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~--~d~v~Hit~qH~~ 75 (198)
.|.|+.|+..| ....|..|....|. ...+|+.|...-. .++..|+...|..
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~ 84 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKL 84 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 49999999865 56889999999884 6789999988643 5899999766654
No 34
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=93.58 E-value=0.07 Score=37.65 Aligned_cols=48 Identities=23% Similarity=0.508 Sum_probs=32.0
Q ss_pred eecCC--CCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhh
Q 029136 22 CFPCP--FCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQ 72 (198)
Q Consensus 22 ~F~CP--fC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~q 72 (198)
.|.|| .|+..| +...|..|+. .| ..+.-.|++|...- ..++..|+...
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~-~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h 57 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVH 57 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHG-GG--SCCCEECTTTCCEESSHHHHHHHGGGT
T ss_pred cccCCCCCCcCccCCHHHHHHHHH-Hc--CCCCeECCCCCchhCCHHHHHHHHHHc
Confidence 47788 787755 4567788875 45 45667788887753 35777777543
No 35
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.15 E-value=0.077 Score=33.08 Aligned_cols=39 Identities=13% Similarity=0.327 Sum_probs=30.5
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccc
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
..|.|+.|+..| ....|..|+...|.- .++-.|++|...
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~ 50 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSG 50 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCS
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCC
Confidence 359999999865 567788998877765 466789999764
No 36
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.91 E-value=0.048 Score=39.87 Aligned_cols=51 Identities=25% Similarity=0.459 Sum_probs=35.0
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCcccccccc--cccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--~~d~v~Hit~qH~ 74 (198)
.|.|++ |+..| ....|..|+.. |.. .++-.|++ |...- ..++..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 488987 88744 56678888875 433 35678888 88763 3588888854553
No 37
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.40 E-value=0.11 Score=36.14 Aligned_cols=45 Identities=24% Similarity=0.454 Sum_probs=34.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFM 70 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit 70 (198)
.|.|+.|+..| ....|..|+.. | .+.-.|++|...- ..++..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 49999998855 56678889876 4 3678899998864 358888883
No 38
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.34 E-value=0.12 Score=30.52 Aligned_cols=35 Identities=14% Similarity=0.028 Sum_probs=26.7
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|....|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence 499999988554 57788898756754 467889988
No 39
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.71 E-value=0.24 Score=32.17 Aligned_cols=51 Identities=25% Similarity=0.550 Sum_probs=38.9
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCcccccccc--cccch--hhhHhhhHhhhh
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--~~d~v~Hit~qH 73 (198)
.|.|++ |+..| ....|..|+...|.. .+.-.|++ |...- ..++..|+++.+
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 64 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHS 64 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence 488888 98865 567899999877765 46689998 98863 468889986543
No 40
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.67 E-value=0.17 Score=29.91 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=25.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRG-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGG-GTSC-CCCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhh-hcCC-CCCCCCCCC
Confidence 49999998855 4567888965 4654 367889998
No 41
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=91.62 E-value=0.23 Score=33.46 Aligned_cols=54 Identities=17% Similarity=0.350 Sum_probs=37.2
Q ss_pred cceeecCCC--Cccch-hHHHHHhhhhhhccCCccccccc--ccccch--hhhHhhhHhhhhh
Q 029136 19 VKACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 19 ~r~~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCP--VCa~~v--~~d~v~Hit~qH~ 74 (198)
-+..|.|++ |+..| ....|..|+.. |.. .+.-.|| +|...- ..++..|++..++
T Consensus 12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp SCCCEECCSSSCCCEESCHHHHHHHHHH-HSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred cCcceEcCCCCCCCcccCHHHHHHHHHH-hCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 345789998 98855 57788889875 432 3567897 598763 3588888865443
No 42
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=91.54 E-value=0.2 Score=32.60 Aligned_cols=50 Identities=18% Similarity=0.310 Sum_probs=35.2
Q ss_pred ecC--CCCccch-hHHHHHhhhhhhccCCcccccccc--cccch--hhhHhhhHhhhhh
Q 029136 23 FPC--PFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 23 F~C--PfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--~~d~v~Hit~qH~ 74 (198)
|.| +.|+..| ....|..|... |.. .++-.|++ |...- ..++..|+++.++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 788 7798865 46778888754 443 35678988 98753 3588888876665
No 43
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=91.50 E-value=0.17 Score=29.96 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=25.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGC-CCCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 49999999865 45678889765 544 367889998
No 44
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=91.48 E-value=0.17 Score=33.78 Aligned_cols=48 Identities=25% Similarity=0.453 Sum_probs=37.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccc--hhhhHhhhHhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMV 71 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~--v~~d~v~Hit~ 71 (198)
-|.|+.|+..| ....|..|.. .|.- .++-.|++|... -..++..|+++
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~-~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRR-AHLG-YRPRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHH-HHHT-CCCEECTTTCCEESSHHHHHHHGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHH-HhCC-CcCeECCCCCCCcCCHHHHHHHhCc
Confidence 39999999976 4567899986 4754 577899999996 44699999864
No 45
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.48 E-value=0.15 Score=30.12 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=25.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 49999998855 45678889754 6543 67889998
No 46
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.47 E-value=0.15 Score=35.49 Aligned_cols=49 Identities=22% Similarity=0.474 Sum_probs=37.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
.|.|+.|+..| ....|..|+. |.. .++-.|++|...- ..++..|++..|
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H 93 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVH 93 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTS
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHc
Confidence 59999998855 4677889983 754 4668999999864 368899985444
No 47
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=91.43 E-value=0.2 Score=29.61 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=25.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 49999998855 45778889765 644 467889998
No 48
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=91.42 E-value=0.11 Score=30.68 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=26.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCA 58 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa 58 (198)
.|.|+.|+..| ....|..|+.. |.- .+.-.||+|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCCC
Confidence 49999999865 56778889765 543 4677899983
No 49
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.33 E-value=0.35 Score=35.41 Aligned_cols=48 Identities=23% Similarity=0.437 Sum_probs=37.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhcc--CCcccccccccccch--hhhHhhhH
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHC--FEMKNAVCPLCAANL--GKDAAEHF 69 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~--~e~k~vVCPVCa~~v--~~d~v~Hi 69 (198)
.|.|+.|+..| ....|..|+...|. ...++-.|++|...- ..++..|+
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHN 70 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHH
Confidence 49999999866 46779999987785 345678999999863 46888883
No 50
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=91.19 E-value=0.22 Score=32.93 Aligned_cols=51 Identities=18% Similarity=0.488 Sum_probs=37.9
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
..|.|++|+..| ....|..|+.. |.. .++-.|++|...- ..++..|+.+.+
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 33 KPFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred CCccCCCCCcccCCHHHHHHHHHH-cCC-CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 359999998855 56778999875 433 3567899999864 368999986544
No 51
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=91.15 E-value=0.19 Score=32.71 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=36.5
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCcccccccc---cccc--hhhhHhhhHhhhh
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL---CAAN--LGKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV---Ca~~--v~~d~v~Hit~qH 73 (198)
.|.||+ |++.| ....|..|+...+. -.|++ |... -..++..|++..|
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 499999 98855 67889999977655 67999 9876 3468999987654
No 52
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=91.12 E-value=0.2 Score=32.32 Aligned_cols=48 Identities=21% Similarity=0.497 Sum_probs=35.0
Q ss_pred eeecCCC--Cccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHh
Q 029136 21 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFM 70 (198)
Q Consensus 21 ~~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit 70 (198)
..|.||+ |+..| ....|..|+.. |.. .++-.|++|...- ..++..|++
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHH
Confidence 3599996 98855 55778899764 543 3567899999864 358888874
No 53
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.91 E-value=0.19 Score=29.69 Aligned_cols=34 Identities=15% Similarity=0.114 Sum_probs=25.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSS-SSCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHH-HHCC-CCCCCCCCC
Confidence 49999999855 4567888876 4544 467889998
No 54
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.88 E-value=0.21 Score=29.45 Aligned_cols=34 Identities=12% Similarity=-0.024 Sum_probs=25.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45778889765 644 467789998
No 55
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.83 E-value=0.2 Score=29.65 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=25.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45778889765 544 467789998
No 56
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=90.83 E-value=0.25 Score=32.59 Aligned_cols=51 Identities=20% Similarity=0.404 Sum_probs=32.9
Q ss_pred eeecCCC--Cccch-hHHHHHhhhhhhccCCccccccc--ccccch--hhhHhhhHhhhh
Q 029136 21 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 21 ~~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCP--VCa~~v--~~d~v~Hit~qH 73 (198)
..|.|++ |+..| ....|..|+.. |.. .++-.|| +|...- ..++..|+...+
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~ 61 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHT 61 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcC
Confidence 4588888 87755 45677788765 322 3556786 587753 357777875433
No 57
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=90.77 E-value=0.21 Score=29.39 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=25.4
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|- ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999988554 5678889754 543 467889998
No 58
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=90.71 E-value=0.18 Score=38.30 Aligned_cols=51 Identities=18% Similarity=0.382 Sum_probs=36.0
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|+.|+..| ....|..|+...+. .++-.|++|...- ..++..|+++.++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 48899998755 45678888876443 3557899998863 3588888876443
No 59
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.71 E-value=0.3 Score=35.55 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=32.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccC-Ccccccccccc-----cc--hhhhHhhhHhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCF-EMKNAVCPLCA-----AN--LGKDAAEHFMVQH 73 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~-e~k~vVCPVCa-----~~--v~~d~v~Hit~qH 73 (198)
.|.|+.|+..| ....|..|+...|.. +.+.-+|++|. .. -..++..|++..+
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~ 63 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcC
Confidence 47888888755 467788888875533 34556777643 22 2347777775543
No 60
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.65 E-value=0.21 Score=29.53 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=25.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCC-CCCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCC-CCCCCCCCC
Confidence 49999999865 45678889765 644 467789988
No 61
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.56 E-value=0.22 Score=29.30 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=25.7
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|.. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK-CHTGE-RHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH-HHSCC-SSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 499999988554 577889975 56543 66789988
No 62
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.55 E-value=0.16 Score=29.93 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQR-IHTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHG-GGSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 49999998855 4567888875 46543 67889998
No 63
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.54 E-value=0.23 Score=29.34 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=25.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQ-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TTSS-CCSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 49999998855 4577888976 4544 367789988
No 64
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.49 E-value=0.22 Score=29.43 Aligned_cols=34 Identities=15% Similarity=0.076 Sum_probs=25.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|++|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45678889754 543 467889988
No 65
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.48 E-value=0.22 Score=29.49 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=25.8
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999999855 55778899754 643 466789998
No 66
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.46 E-value=0.081 Score=37.05 Aligned_cols=50 Identities=14% Similarity=0.095 Sum_probs=34.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhh-ccCCcccccccccccch----hhhHhhhHhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEE-HCFEMKNAVCPLCAANL----GKDAAEHFMV 71 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~ee-H~~e~k~vVCPVCa~~v----~~d~v~Hit~ 71 (198)
.|.|+.|+..| ....|..|+... |..+.....|++|...- ..++..|+++
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~ 74 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK 74 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCS
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhc
Confidence 49999998855 467889998851 33333344599998643 3577778754
No 67
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=90.41 E-value=0.21 Score=37.60 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=35.9
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccc--hhhhHhhhHhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMV 71 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~--v~~d~v~Hit~ 71 (198)
-.|.|+.|+..| ....|..|+. .|.. .++-.|++|... -..++..|+.+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFN-IHSW-EKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHH-HHHC-CSCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHH-HcCC-CCCeeCCccCeecccccchhhhccc
Confidence 459999998855 5677888976 4654 356789999876 34588888754
No 68
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.16 E-value=0.23 Score=29.32 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=25.4
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 499999988554 567888976 4544 367889998
No 69
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.08 E-value=0.27 Score=29.13 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=25.6
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TSC-SSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999998654 5678889764 543 467889998
No 70
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=89.96 E-value=0.27 Score=29.14 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45668888764 644 467889988
No 71
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=89.79 E-value=0.31 Score=28.62 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=25.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999999865 45778889754 644 467789988
No 72
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.76 E-value=0.22 Score=29.39 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=25.7
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSS-CCCSSSCCC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999988554 5678889765 654 367889988
No 73
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.73 E-value=0.31 Score=28.63 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=25.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 49999998855 4577889985 4644 466789988
No 74
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=89.65 E-value=0.36 Score=31.82 Aligned_cols=48 Identities=17% Similarity=0.411 Sum_probs=35.3
Q ss_pred eeecCCC--Cccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHh
Q 029136 21 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFM 70 (198)
Q Consensus 21 ~~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit 70 (198)
..|.||+ |+..| ....|..|+. .|.. .++-.|++|...- ..++..|++
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYR-KHTG-HRPFQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHH-HHHC-CCCEECSSSSCEESSHHHHHHHGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHH-HcCC-CCCccCCCCCcccCCHHHHHHHHH
Confidence 3599986 98865 5677889985 4544 3567899999863 358888874
No 75
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.65 E-value=0.3 Score=28.83 Aligned_cols=34 Identities=21% Similarity=0.132 Sum_probs=25.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999998855 55778899754 644 467789988
No 76
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.49 E-value=0.31 Score=28.83 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=25.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999998855 45778889765 544 466789988
No 77
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.48 E-value=0.26 Score=29.01 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=25.6
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|- ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999988554 5778889765 644 467789988
No 78
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=89.42 E-value=0.33 Score=36.82 Aligned_cols=20 Identities=20% Similarity=0.571 Sum_probs=8.2
Q ss_pred ecCCCCccch-hHHHHHhhhh
Q 029136 23 FPCPFCYLEI-EAHMICSHLQ 42 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~ 42 (198)
|.|+.|+..| ....|..|+.
T Consensus 50 ~~C~~C~~~f~~~~~l~~H~~ 70 (190)
T 2i13_A 50 YKCPECGKSFSDKKDLTRHQR 70 (190)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred ccCCCcCchhCCHHHHHHHHH
Confidence 4444444422 2234444443
No 79
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.42 E-value=0.31 Score=28.73 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=25.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSM-VHTA-EKPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HTTC-CCSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 49999998865 4567888865 4644 367789988
No 80
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.39 E-value=0.39 Score=28.39 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=25.5
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQR-VHMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGG-GGGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 499999988654 577888976 4543 466789988
No 81
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.37 E-value=0.34 Score=28.56 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=25.4
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999988554 5778889754 543 467789988
No 82
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=89.29 E-value=0.39 Score=33.25 Aligned_cols=48 Identities=17% Similarity=0.293 Sum_probs=25.7
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCccccccc--ccccch--hhhHhhhHhh
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMV 71 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCP--VCa~~v--~~d~v~Hit~ 71 (198)
.|.|++ |+..| ....|..|+...+ . .+.-.|+ +|...- ..++..|+..
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~~~C~~~f~~~~~l~~H~~~ 60 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRKHT-G-EKPYQCDFKDCERRFSRSDQLKRHQRR 60 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHHHH-T-TCCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHhhC-C-CCCccCCCCCCcCccCCHHHHHHHHHH
Confidence 366666 66533 4556666665332 2 2345666 566542 2466666654
No 83
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.26 E-value=0.13 Score=34.20 Aligned_cols=49 Identities=18% Similarity=0.407 Sum_probs=30.4
Q ss_pred cccCcceeecCCCCccchhHHH-------HHhhhhhhccCC-cccccccccccchhh
Q 029136 15 IDDDVKACFPCPFCYLEIEAHM-------ICSHLQEEHCFE-MKNAVCPLCAANLGK 63 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD~~~-------Lc~H~~eeH~~e-~k~vVCPVCa~~v~~ 63 (198)
..+++...+.||.|.+.+.... +|..|...+-.. ..+..||+|...+..
T Consensus 13 ~~~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 13 FVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred HHHhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 3456778899999977555321 223344444332 345789999987654
No 84
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=89.24 E-value=0.29 Score=29.42 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=27.4
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccc
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCA 58 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa 58 (198)
..|.|+.|+..| ....|..|+.. |.. .++-.|++|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~ 47 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSS 47 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCC
Confidence 459999999865 56778899764 543 4678899996
No 85
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.24 E-value=0.26 Score=29.27 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=25.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTG-QRPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHS-CCCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45678888765 544 366789988
No 86
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=88.99 E-value=0.37 Score=36.55 Aligned_cols=49 Identities=20% Similarity=0.339 Sum_probs=24.1
Q ss_pred ecCC--CCcc-chhHHHHHhhhhhhccCCcccccc--cccccch--hhhHhhhHhh
Q 029136 23 FPCP--FCYL-EIEAHMICSHLQEEHCFEMKNAVC--PLCAANL--GKDAAEHFMV 71 (198)
Q Consensus 23 F~CP--fC~e-~fD~~~Lc~H~~eeH~~e~k~vVC--PVCa~~v--~~d~v~Hit~ 71 (198)
|.|+ .|+. -.....|..|+...|....+.-.| ++|...- ..++..|+++
T Consensus 73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 128 (190)
T 1tf6_A 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS 128 (190)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH
Confidence 5555 5554 223445555555555444444555 5555432 2355555543
No 87
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.96 E-value=0.35 Score=28.47 Aligned_cols=34 Identities=18% Similarity=0.033 Sum_probs=25.2
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|- ...|..|+. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHT-TTTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 499999988554 567888976 4543 467789988
No 88
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.95 E-value=0.35 Score=28.53 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=25.3
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999988554 5678889654 644 467889998
No 89
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.93 E-value=0.33 Score=28.49 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=25.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 49999998855 45678889754 544 467789988
No 90
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=88.90 E-value=0.23 Score=36.60 Aligned_cols=45 Identities=24% Similarity=0.544 Sum_probs=29.6
Q ss_pred cccccccccC-cceeecCCCCcc--chhHHHHHhhhhhhccCCcccccccccccchh
Q 029136 9 IVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 9 ~~de~e~ddd-~r~~F~CPfC~e--~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
.++|++-|++ ...+|+|| |+. .+....|-.. .--+.||-|+-++.
T Consensus 16 ~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 16 EIEDFQYDEDSETYFYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLIIK 63 (83)
T ss_dssp EGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEEE
T ss_pred EHHHceEccCCCEEEEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEEE
Confidence 4566665433 45689999 976 5666666421 12578999998764
No 91
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.85 E-value=0.27 Score=29.05 Aligned_cols=34 Identities=12% Similarity=0.046 Sum_probs=25.6
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 499999988554 5678889765 543 466789988
No 92
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.83 E-value=0.34 Score=28.54 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence 49999998855 4577888975 4544 467889988
No 93
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=88.76 E-value=0.29 Score=28.96 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=25.5
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|- ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999988554 5778889765 543 467889988
No 94
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.75 E-value=0.34 Score=28.65 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=25.3
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 499999998554 5678889765 543 466789988
No 95
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.65 E-value=0.29 Score=28.85 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=25.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSC-CCCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45678888754 644 467789988
No 96
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.63 E-value=0.39 Score=28.18 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=25.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999998855 45678889754 644 467789988
No 97
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.61 E-value=0.35 Score=28.51 Aligned_cols=34 Identities=15% Similarity=0.028 Sum_probs=25.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45678888764 543 467789988
No 98
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.59 E-value=0.3 Score=28.80 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=25.4
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|++|+..|. ...|..|+. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQR-VHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGG-GGSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 499999988554 567888975 4544 467789988
No 99
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.46 E-value=0.36 Score=28.35 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 49999998855 45678889754 544 466789988
No 100
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.26 E-value=0.49 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=25.1
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 499999988554 5678889764 543 466789988
No 101
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=88.23 E-value=0.17 Score=37.85 Aligned_cols=47 Identities=23% Similarity=0.504 Sum_probs=30.7
Q ss_pred ccccccccccC-cceeecCCCCcc--chhHHHHHhhhhhhccCCcccccccccccchhh
Q 029136 8 SIVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 8 ~~~de~e~ddd-~r~~F~CPfC~e--~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
+.++|++-|++ ...+|+|| ||. .+....|-.. .--+.||-|+-.+..
T Consensus 8 V~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~IkV 57 (89)
T 2jr7_A 8 VEIEDFQYDEDSETYFYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIKV 57 (89)
T ss_dssp EETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEEE
T ss_pred EEHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEEE
Confidence 34566664333 35689999 976 6666666421 125789999998653
No 102
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.10 E-value=0.27 Score=29.10 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=24.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 48999998854 45678888765 443 356789888
No 103
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.98 E-value=0.45 Score=27.75 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=25.3
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999988554 5778889765 543 466789988
No 104
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=87.94 E-value=0.49 Score=27.94 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45678889654 554 466789988
No 105
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=87.86 E-value=0.6 Score=32.71 Aligned_cols=52 Identities=17% Similarity=0.296 Sum_probs=37.4
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccc--cccch--hhhHhhhHhhhhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--~~d~v~Hit~qH~ 74 (198)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++ |...- ..++..|++..++
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 33 RVHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 359999998855 56788899875 433 45678987 98863 3688889865443
No 106
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=87.59 E-value=0.45 Score=32.88 Aligned_cols=50 Identities=14% Similarity=0.382 Sum_probs=37.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.| .|+..| ....|..|+...+. .+.-.|++|...- ..++..|+...++
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 62 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTG 62 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred CEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 4999 898855 56789999886443 3567999999864 3689999865443
No 107
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.47 E-value=0.47 Score=27.82 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=25.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQR-VHMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHT-TTCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 49999998865 4567888975 4544 466789988
No 108
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=87.42 E-value=0.2 Score=33.79 Aligned_cols=47 Identities=13% Similarity=0.258 Sum_probs=28.4
Q ss_pred cccCcceeecCCCCccchhHHH--HHhh-----hhhhccCCcccccccccccchh
Q 029136 15 IDDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
|++++..+|.||.|.+.+.... -|-| |..++- +.....||+|...+.
T Consensus 1 g~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~-~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 1 GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLL 54 (78)
T ss_dssp CCCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHH-TTTCCBCTTTCCBCS
T ss_pred CCcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHH-HHCcCCCCCCcCCCC
Confidence 4567778899999976443221 1222 233322 223678999998865
No 109
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.30 E-value=0.48 Score=27.86 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=24.8
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999998855 45678889754 543 466789886
No 110
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.25 E-value=0.53 Score=27.69 Aligned_cols=34 Identities=18% Similarity=-0.008 Sum_probs=25.3
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999988554 5678889765 543 466789988
No 111
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.88 E-value=0.52 Score=27.82 Aligned_cols=34 Identities=15% Similarity=-0.026 Sum_probs=25.2
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 499999988554 5778889765 543 456789988
No 112
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.83 E-value=0.42 Score=28.14 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=25.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRR-VHTG-GKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTH-HHHS-CCCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 49999998854 4567888875 4544 367789988
No 113
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.67 E-value=0.21 Score=34.86 Aligned_cols=52 Identities=10% Similarity=0.004 Sum_probs=36.9
Q ss_pred ceeecCCCCccch---hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhh
Q 029136 20 KACFPCPFCYLEI---EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 73 (198)
Q Consensus 20 r~~F~CPfC~e~f---D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH 73 (198)
+..+.|+.|+..| ....|..|+.. |.. .++-.|++|...- ..++..|++..|
T Consensus 48 ~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh 104 (115)
T 2dmi_A 48 DNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTK 104 (115)
T ss_dssp SCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred CCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhC
Confidence 3456699998866 66778888755 543 3667899998864 368888885544
No 114
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.57 E-value=0.61 Score=27.50 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=24.8
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|++|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999998855 45678888764 543 466789886
No 115
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=86.14 E-value=0.89 Score=32.02 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=28.7
Q ss_pred cCcceeecCCCCc------------cchhHHHHHhhhhhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCY------------LEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~------------e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.++..+|.||-|. -.|+...+..|+.. +..||+|......
T Consensus 9 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 9 SDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLTE 60 (85)
T ss_dssp TTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCCG
T ss_pred hcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCCh
Confidence 4566789998864 34677777777763 4689999987653
No 116
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=85.54 E-value=0.46 Score=35.01 Aligned_cols=46 Identities=24% Similarity=0.524 Sum_probs=30.2
Q ss_pred ccccccccccC-cceeecCCCCcc--chhHHHHHhhhhhhccCCcccccccccccchh
Q 029136 8 SIVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 8 ~~~de~e~ddd-~r~~F~CPfC~e--~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
+.++|++-|++ -..+|+|| |+. .+....|-.. ---+.||-|+-++.
T Consensus 8 v~leDm~~de~~~~y~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 8 IEIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMID 56 (83)
T ss_dssp CBGGGSEEETTTTEEEEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEEE
T ss_pred EEHHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 44666654433 34689999 976 6666666321 22478999999765
No 117
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.47 E-value=0.34 Score=30.56 Aligned_cols=43 Identities=14% Similarity=0.421 Sum_probs=24.6
Q ss_pred cccCcceeecCCCCccchhHH-------HHHhhhhhhccCC-ccccccccc
Q 029136 15 IDDDVKACFPCPFCYLEIEAH-------MICSHLQEEHCFE-MKNAVCPLC 57 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD~~-------~Lc~H~~eeH~~e-~k~vVCPVC 57 (198)
..++++..+.||.|.+.+... ..|..|....-.. .++..||+|
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 8 ALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CSSCSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred HhhccccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 345677789999997755432 1223334433222 245678887
No 118
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=85.45 E-value=0.91 Score=30.62 Aligned_cols=51 Identities=20% Similarity=0.339 Sum_probs=35.4
Q ss_pred ecCCC--Cccchh-HHHHHhhhhhhccCCc-----cccccc--ccccc--hhhhHhhhHhhhh
Q 029136 23 FPCPF--CYLEIE-AHMICSHLQEEHCFEM-----KNAVCP--LCAAN--LGKDAAEHFMVQH 73 (198)
Q Consensus 23 F~CPf--C~e~fD-~~~Lc~H~~eeH~~e~-----k~vVCP--VCa~~--v~~d~v~Hit~qH 73 (198)
|.|-. |.+.|+ ...|+.|+.++|-... ++-+|. -|... ....|+.||++.|
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 34444 777554 5669999999996543 356776 77764 3358999998876
No 119
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=84.58 E-value=0.53 Score=30.23 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=25.1
Q ss_pred eecCCCCccchhHHHHHhhhhhhccCCcccccccccccc
Q 029136 22 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
.|.||.|+..|....-. ...|.. .++-.|++|...
T Consensus 14 ~~~C~~C~k~F~~~~~l---~~~H~~-~k~~~C~~C~k~ 48 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEAN---QLFDPM-TGTFRCTFCHTE 48 (62)
T ss_dssp EEECSSSCCEEEHHHHH---HHEETT-TTEEBCSSSCCB
T ss_pred CccCCCCCchhccHHHh---HhhcCC-CCCEECCCCCCc
Confidence 49999999877664422 255654 467899999875
No 120
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=84.40 E-value=0.26 Score=33.05 Aligned_cols=48 Identities=19% Similarity=0.443 Sum_probs=30.0
Q ss_pred ccCcceeecCCCCccchhHH-------HHHhhhhhhccCC-----cccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAH-------MICSHLQEEHCFE-----MKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~-------~Lc~H~~eeH~~e-----~k~vVCPVCa~~v~~ 63 (198)
.+++...+.||.|.+.+... .+|..|..++-.. .....||+|...+..
T Consensus 6 ~~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 6 SGNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp SCCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred HhhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 35677789999997755542 1233344444332 236789999988764
No 121
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=83.24 E-value=1.3 Score=30.53 Aligned_cols=51 Identities=16% Similarity=0.395 Sum_probs=38.0
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhhhh
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~qH~ 74 (198)
.|.|++ |+..| ....|..|+...+ ..++-.|++|...- ..++..|+++.++
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHT--GVKPFQCKTCQRKFSRSDHLKTHTRTHTG 91 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcC--CCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence 599995 98855 5678999988644 24567899999864 4689999875443
No 122
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.01 E-value=0.18 Score=34.50 Aligned_cols=48 Identities=21% Similarity=0.442 Sum_probs=28.9
Q ss_pred ccccCcceeecCCCCccchhHHH--HHhh-----hhhhccCCcccccccccccchhh
Q 029136 14 EIDDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 14 e~ddd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
+++++....+.||-|.+.+.... -|-| |....- .+...||+|...+..
T Consensus 7 ~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 7 GGSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHF--RATPRCYICDQPTGG 61 (81)
T ss_dssp CCSSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHH--HHCSBCSSSCCBCCS
T ss_pred CCcccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHH--HCCCcCCCcCccccc
Confidence 34556677899999977554321 1333 333222 125689999998763
No 123
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=82.89 E-value=0.69 Score=24.16 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=18.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccC
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCF 47 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~ 47 (198)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 37899998866 456788886656643
No 124
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=82.79 E-value=0.18 Score=33.91 Aligned_cols=48 Identities=19% Similarity=0.391 Sum_probs=28.7
Q ss_pred ccCcceeecCCCCccchhHHH--HHhh-----hhhhccCC----cccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFE----MKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e----~k~vVCPVCa~~v~~ 63 (198)
.+++...+.||-|.+.+.... -|-| |...+-.. .....||+|...+..
T Consensus 13 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 13 LEMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HHhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 355677899999977554321 1333 33332222 236789999887664
No 125
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.70 E-value=0.33 Score=31.52 Aligned_cols=20 Identities=15% Similarity=0.496 Sum_probs=14.9
Q ss_pred ccccCcceeecCCCCccchh
Q 029136 14 EIDDDVKACFPCPFCYLEIE 33 (198)
Q Consensus 14 e~ddd~r~~F~CPfC~e~fD 33 (198)
+..+++...+.||.|.+.+.
T Consensus 12 ~~~~~~~~~~~C~IC~~~~~ 31 (63)
T 2ysj_A 12 QFVNKLQEEVICPICLDILQ 31 (63)
T ss_dssp CCCCCCCCCCBCTTTCSBCS
T ss_pred HHHHhCccCCCCCcCCchhC
Confidence 34466788899999977554
No 126
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=82.55 E-value=0.11 Score=36.24 Aligned_cols=47 Identities=23% Similarity=0.456 Sum_probs=29.7
Q ss_pred cccCcceeecCCCCccchhH-HHH--Hhh-----hhhhccCCcccccccccccch
Q 029136 15 IDDDVKACFPCPFCYLEIEA-HMI--CSH-----LQEEHCFEMKNAVCPLCAANL 61 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD~-~~L--c~H-----~~eeH~~e~k~vVCPVCa~~v 61 (198)
+++++...|.||-|.+.|.. +.| |-| |..++-.......||+|...+
T Consensus 6 ~~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 6 EDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp SCCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred ccccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 34677788999999774432 222 334 444443334457899999875
No 127
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=81.40 E-value=1.4 Score=32.94 Aligned_cols=51 Identities=20% Similarity=0.322 Sum_probs=39.8
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccc--hhhhHhhhHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~--v~~d~v~Hit~qH~ 74 (198)
.|.|++|+..| ....|..|.. .|.- .++-.|++|... -..++..|+...|+
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~ 103 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEI-HHTG-ERRYQCLACGKSFINYQFMSSHIKSVHS 103 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHH-HHHT-CCCEEESSSCCEESSHHHHHHHHHHHTC
T ss_pred CeeCCccCeecccccchhhhcc-ccCC-CccccCCCCCCCcCCHHHHHHHhHHhcC
Confidence 49999999865 4668889975 4654 366899999986 34699999988775
No 128
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=81.28 E-value=2.4 Score=28.32 Aligned_cols=49 Identities=18% Similarity=0.444 Sum_probs=36.2
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCcccccccccccch--hhhHhhhHhhh
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQ 72 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--~~d~v~Hit~q 72 (198)
.|.||+ |+..| ....|..|+.. |.. .++-.|++|...- ..++..|+++.
T Consensus 45 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 45 PYKCTWEGCDWRFARSDELTRHYRK-HTG-AKPFQCGVCNRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHH-HTS-CCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred CeeCCCCCCCCccCCHHHHHHHHHH-hCC-CCCeECCCCcCccCCHHHHHHHHHHh
Confidence 599986 98855 56788899865 433 3668999999863 46888888643
No 129
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.99 E-value=0.24 Score=33.24 Aligned_cols=48 Identities=21% Similarity=0.465 Sum_probs=27.7
Q ss_pred ccCcceeecCCCCccchhHHH--HHhh-----hhhhccCC----cccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFE----MKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e----~k~vVCPVCa~~v~~ 63 (198)
.+++...+.||.|.+.+.... -|-| |...+-.. .....||+|...+..
T Consensus 13 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 13 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 356777899999987654321 1223 22222111 235789999887664
No 130
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=80.97 E-value=1.2 Score=33.65 Aligned_cols=51 Identities=18% Similarity=0.304 Sum_probs=37.7
Q ss_pred eecC--CCCccch-hHHHHHhhhhhhccCCcccccccc--cccch--hhhHhhhHhhhhh
Q 029136 22 CFPC--PFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 22 ~F~C--PfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--~~d~v~Hit~qH~ 74 (198)
.|.| +.|+..| ....|..|+.. |.. .++-.||+ |...- ..++..|+++.++
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 5899 7798844 56788999875 433 46678988 99874 3689999976555
No 131
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=80.90 E-value=1.6 Score=31.79 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=27.4
Q ss_pred cCcceeecCCCCcc------------chhHHHHHhhhhhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCYL------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e------------~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.++..+|.||-|.+ .|+...+..|+.. +..||+|......
T Consensus 24 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 75 (100)
T 2kre_A 24 SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTLTE 75 (100)
T ss_dssp SSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBCCT
T ss_pred ccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCCCh
Confidence 44667899998743 4556666666642 4689999987653
No 132
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.89 E-value=0.51 Score=30.95 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=28.4
Q ss_pred ccCcceeecCCCCccchhHHH--HHhh-----hhhhccCCcccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.+++...+.||.|.+.+.... -|-| |....-. ..+..||+|...+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 9 VKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLS-SSSPKCTACQESIVK 62 (66)
T ss_dssp CCSCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHT-TSSCCCTTTCCCCCT
T ss_pred hhcCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHH-hCcCCCCCCCcCCCh
Confidence 356677899999976544221 2333 3333321 345789999987654
No 133
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=80.58 E-value=0.32 Score=32.77 Aligned_cols=48 Identities=25% Similarity=0.668 Sum_probs=29.7
Q ss_pred cccCcceeecCCCCccchhHHH-----HHhhhhhhccCCc---ccccccccccchh
Q 029136 15 IDDDVKACFPCPFCYLEIEAHM-----ICSHLQEEHCFEM---KNAVCPLCAANLG 62 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD~~~-----Lc~H~~eeH~~e~---k~vVCPVCa~~v~ 62 (198)
.+++....+.||.|.+.|+... -|.|.-=.++... +...||+|...+.
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 8 TEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 63 (78)
T ss_dssp CCTTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCC
T ss_pred CcccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccC
Confidence 3455667899999987665321 2666433333321 3468999988754
No 134
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=80.21 E-value=1.6 Score=31.78 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=26.4
Q ss_pred cCcceeecCCCCcc-------------chhHHHHHhhhhhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCYL-------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e-------------~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.++..+|.||-|.+ .|+...+..|+.. +..||+|...+..
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPLTM 69 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBCCT
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCCCh
Confidence 45667899998743 3445555555542 4689999987653
No 135
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=79.57 E-value=2 Score=27.43 Aligned_cols=49 Identities=16% Similarity=0.313 Sum_probs=35.1
Q ss_pred ceeecCCC--Cccch-hHHHHHhhhhhhccCCcccccccc--cccch--hhhHhhhHh
Q 029136 20 KACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFM 70 (198)
Q Consensus 20 r~~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--~~d~v~Hit 70 (198)
...|.|++ |+..| ....|..|+.. |.. .++-.|++ |...- ..++..|++
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred cCceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 45699999 98855 46778899864 543 46688976 99864 357777763
No 136
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=79.57 E-value=1.6 Score=31.82 Aligned_cols=50 Identities=16% Similarity=0.267 Sum_probs=37.0
Q ss_pred ecCCCCccch-hHHHHHhhhhhhccCCcccccccc--cccch--hhhHhhhHhhhhh
Q 029136 23 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 74 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--~~d~v~Hit~qH~ 74 (198)
|.|+.|+..| ....|..|+...+. .+.-.|++ |...- ..++..|+++.++
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~ 117 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIRVHTG--EKPFPCPFPGCGKIFARSENLKIHKRTHTG 117 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTHHHHC--CCSEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred cCCCCcccccCCHHHHHHHHHhcCC--CCcccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence 8999998855 56778899886432 45678998 98864 4688899865443
No 137
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=79.39 E-value=0.32 Score=34.46 Aligned_cols=46 Identities=20% Similarity=0.528 Sum_probs=29.2
Q ss_pred ccCcceeecCCCCccchhHH-HH--Hhh-----hhhhccCCcccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAH-MI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~-~L--c~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
-+++...+.||.|.+.|... .+ |-| |...+-. +...||+|...+..
T Consensus 16 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 16 MKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS--YKTQCPTCCVTVTE 69 (99)
T ss_dssp GHHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT--TCCBCTTTCCBCCG
T ss_pred HHhCCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH--CCCCCCCCCCcCCh
Confidence 34566789999997755433 22 444 3333322 34689999998764
No 138
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=79.32 E-value=1.1 Score=31.60 Aligned_cols=29 Identities=24% Similarity=0.568 Sum_probs=24.8
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMK 50 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k 50 (198)
.|.|++|+..| ....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 49999999855 778899999999998754
No 139
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=79.19 E-value=0.7 Score=32.51 Aligned_cols=45 Identities=20% Similarity=0.492 Sum_probs=27.6
Q ss_pred CcceeecCCCCccchhHH---HH---Hhh-----hhhhccCCcccccccccccchhh
Q 029136 18 DVKACFPCPFCYLEIEAH---MI---CSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 18 d~r~~F~CPfC~e~fD~~---~L---c~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
+++.++.||-|.+.++.. .+ |-| |-.... +..+..||+|...+..
T Consensus 7 ~~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~-~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 7 AKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR-TDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHT-TSSCSBCTTTCCBCSS
T ss_pred ccccCCcCCccCccCccccccccccCCCCCcCHHHHHHHH-hcCCCCCCCCCCccCC
Confidence 345568999998877543 11 333 333332 2246789999987663
No 140
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=78.34 E-value=1.4 Score=22.65 Aligned_cols=23 Identities=17% Similarity=0.739 Sum_probs=15.1
Q ss_pred ecCCCCccch-hHHHHHhhhhhhc
Q 029136 23 FPCPFCYLEI-EAHMICSHLQEEH 45 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~eeH 45 (198)
|.|+.|+..| ....|..|....|
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~h~ 26 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKTKH 26 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred ccCCCCCCccCCHHHHHHHHHHHc
Confidence 7788887755 3466777765443
No 141
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.22 E-value=1.8 Score=25.24 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=22.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 49999998855 45667888754 544 35667775
No 142
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=78.20 E-value=1.4 Score=27.58 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=21.8
Q ss_pred eecCCCCccc-hhHHHHHhhhhhhccCC
Q 029136 22 CFPCPFCYLE-IEAHMICSHLQEEHCFE 48 (198)
Q Consensus 22 ~F~CPfC~e~-fD~~~Lc~H~~eeH~~e 48 (198)
-|.||.|-.+ -....|..|-+..|..+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 4999999764 35677899999999864
No 143
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.49 E-value=1.6 Score=25.43 Aligned_cols=33 Identities=15% Similarity=0.078 Sum_probs=21.8
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..|- ...|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRG-IHTG-EKPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT-TTSC-SCCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhH-hcCC-CCCCCCCC
Confidence 489999988554 466778864 4543 35567764
No 144
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.42 E-value=0.62 Score=30.12 Aligned_cols=47 Identities=19% Similarity=0.553 Sum_probs=27.2
Q ss_pred ccCcceeecCCCCccchhHHH---------HHhhhhhhccCC---cccccccccccchh
Q 029136 16 DDDVKACFPCPFCYLEIEAHM---------ICSHLQEEHCFE---MKNAVCPLCAANLG 62 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~---------Lc~H~~eeH~~e---~k~vVCPVCa~~v~ 62 (198)
.+.+...+.||-|.+.+.... -|-|.-=..+.+ .++..||+|...+.
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 9 GLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CCCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred ccCCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 345566799999988776541 244421111111 12458999987653
No 145
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.40 E-value=1.9 Score=25.15 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=22.0
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRG-IHTG-EKPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHT-TTTT-SSCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-hhCC-CCCCCCCC
Confidence 48999998855 4566778865 4543 35567764
No 146
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=77.25 E-value=0.37 Score=37.40 Aligned_cols=53 Identities=13% Similarity=0.231 Sum_probs=33.0
Q ss_pred cccccccccc-cCcceeecCCCCcc--chhHHHHHhhhhhhccCCcccccccccccchhhhHhhhH
Q 029136 7 HSIVDETEID-DDVKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHF 69 (198)
Q Consensus 7 ~~~~de~e~d-dd~r~~F~CPfC~e--~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~~d~v~Hi 69 (198)
.+.+++++.+ ++....++|| |+. .+....|-. ...+.|+-|+-.+-.-|..|-
T Consensus 96 ~~~~~~m~~~e~~~~f~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~~ 151 (155)
T 2l6l_A 96 QVYLEEMSWNEGDHSFYLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNHH 151 (155)
T ss_dssp EEETTTSEEETTTTEEEEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCCC
T ss_pred eeeHHHhccccCCcEEEEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEcccc
Confidence 3445666543 3344689999 975 445444432 157889999998765555543
No 147
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.11 E-value=2.5 Score=24.52 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=22.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999998855 45677888764 5443 5567765
No 148
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.14 E-value=1.7 Score=29.38 Aligned_cols=49 Identities=20% Similarity=0.562 Sum_probs=28.8
Q ss_pred ccCcceeecCCCCccchhH----H-HH-Hhh-----hhhhccCC-cccccccccccchhhh
Q 029136 16 DDDVKACFPCPFCYLEIEA----H-MI-CSH-----LQEEHCFE-MKNAVCPLCAANLGKD 64 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~----~-~L-c~H-----~~eeH~~e-~k~vVCPVCa~~v~~d 64 (198)
.+++...+.||.|.+.|+. . .| |-| |....-.. .....||+|...+..+
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 9 LDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CCCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred hhhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 3566778999999887665 1 11 222 22222111 1357899999876543
No 149
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.77 E-value=3 Score=24.21 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=22.5
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|++|+..|. ...|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCS-CCCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCC-CCCCCCCC
Confidence 499999988554 5678888654 543 35566764
No 150
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.76 E-value=0.5 Score=31.58 Aligned_cols=47 Identities=21% Similarity=0.441 Sum_probs=29.3
Q ss_pred cccCcceeecCCCCccchh-HHHH--Hhh-----hhhhccCCcccccccccccchhh
Q 029136 15 IDDDVKACFPCPFCYLEIE-AHMI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD-~~~L--c~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
..++++..+.||.|.+.+. ...| |-| |..++-. ....||+|...+..
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 8 NLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQ 62 (72)
T ss_dssp CCCCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHH--HCSSCTTTCCCCCS
T ss_pred hHhhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHH--cCCcCCCcCcccCc
Confidence 3466788899999977554 2222 444 3333321 24689999887653
No 151
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=74.18 E-value=2.1 Score=33.26 Aligned_cols=31 Identities=32% Similarity=0.494 Sum_probs=26.2
Q ss_pred eeecCCCCcc-chhHHHHHhhhhhhccCCccc
Q 029136 21 ACFPCPFCYL-EIEAHMICSHLQEEHCFEMKN 51 (198)
Q Consensus 21 ~~F~CPfC~e-~fD~~~Lc~H~~eeH~~e~k~ 51 (198)
..+.|=||.+ -=+...+..||.+.|-++-..
T Consensus 14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 4599999987 458899999999999998544
No 152
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=73.76 E-value=2.5 Score=27.36 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=28.7
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCcccccccccccc
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
..|.|+.|+..| ....|..|+...|.. +...|++|...
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~--~~~~~~~~~~~ 84 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAGP--DGVEGENSGPS 84 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCCC--CSCCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccCC--CCcccCCCCCC
Confidence 469999998855 667899999776653 45678888653
No 153
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=73.72 E-value=1 Score=29.75 Aligned_cols=35 Identities=20% Similarity=0.578 Sum_probs=21.7
Q ss_pred eeecCCCCccchhHHHHHhhhhhhccCCcccc--cccccccc
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNA--VCPLCAAN 60 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~v--VCPVCa~~ 60 (198)
..|.|+-|+--+|... -+..+++.-+. +||+|.+.
T Consensus 3 ~~y~C~vCGyvyd~~~-----Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAE-----HDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CCEEETTTCCEECGGG-----GTTCCGGGSCTTCBCTTTCCB
T ss_pred CEEECCCCCeEEeCCc-----CCCcchhhCCCCCcCcCCCCc
Confidence 3578999976555421 01156665544 89999874
No 154
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=73.43 E-value=2.7 Score=34.36 Aligned_cols=43 Identities=14% Similarity=0.209 Sum_probs=31.2
Q ss_pred cccCcceeecCCCCc------------cchhHHHHHhhhhhhccCCcccccccccccchhh
Q 029136 15 IDDDVKACFPCPFCY------------LEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~------------e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.+.++...|.||-|. -.|+...+..|+...+ ..||+|......
T Consensus 99 ~~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~------~tcP~t~~~l~~ 153 (179)
T 2f42_A 99 KKREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG------HFDPVTRSPLTQ 153 (179)
T ss_dssp GCCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC------SBCTTTCCBCCG
T ss_pred cccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC------CCCCCCcCCCCh
Confidence 345677889999864 4578888888887532 169999987653
No 155
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.27 E-value=3.5 Score=23.83 Aligned_cols=33 Identities=15% Similarity=0.098 Sum_probs=22.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSS-CCSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCC-CCCcCCCC
Confidence 49999998855 4567888865 4544 35567764
No 156
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.11 E-value=3.5 Score=23.92 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=22.2
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..|. ...|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG-GCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 489999988554 5667888754 5443 5566764
No 157
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=73.06 E-value=0.49 Score=31.96 Aligned_cols=46 Identities=24% Similarity=0.503 Sum_probs=26.8
Q ss_pred cccCcceeecCCCCccchhHHH-H--Hhh-----hhhhccCCcccccccccccc
Q 029136 15 IDDDVKACFPCPFCYLEIEAHM-I--CSH-----LQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD~~~-L--c~H-----~~eeH~~e~k~vVCPVCa~~ 60 (198)
..+++...+.||.|.+.|.... | |-| |...+-.......||+|...
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 8 EDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred ccccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 3467788899999977554321 2 333 22222222223579999885
No 158
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=72.98 E-value=2.1 Score=33.04 Aligned_cols=45 Identities=24% Similarity=0.524 Sum_probs=23.7
Q ss_pred eecCC--CCccchhHHHHHhhhhhhccCCcccccccccccch-hhhHhhhH
Q 029136 22 CFPCP--FCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL-GKDAAEHF 69 (198)
Q Consensus 22 ~F~CP--fC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v-~~d~v~Hi 69 (198)
...|| -|.+.+....|-.|.. + + +-+.+.||-|...+ -.++..|+
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~-~-C-~~~~v~C~~C~~~~~r~~l~~H~ 129 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQA-H-C-EFALMDCPQCQRPFQKFHINIHI 129 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHT-T-C-TTSEEECTTTCCEEEGGGHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHHh-c-C-CceeeECCCCChHHHHHHHHHHh
Confidence 35564 3666666666666642 1 1 12345666666643 34566665
No 159
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.70 E-value=3.1 Score=26.64 Aligned_cols=37 Identities=19% Similarity=0.484 Sum_probs=28.0
Q ss_pred eecCCC--Cccch-hHHHHHhhhhhhccCCcccccccccccc
Q 029136 22 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 22 ~F~CPf--C~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
.|.|+. |+..| ....|..|+.. |.. .++-.|++|...
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~ 77 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGPS 77 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSCC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCCC
Confidence 599999 98855 56788999875 543 366899999753
No 160
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.39 E-value=2.8 Score=24.44 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=21.8
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HTS-SCCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 489999987554 4667778654 543 35566765
No 161
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.34 E-value=3.2 Score=24.05 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=22.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSG-EKPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCC-CSCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 48999998855 45677888754 544 35567764
No 162
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=72.23 E-value=3.2 Score=24.17 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=22.0
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTT-SCSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 48999998755 44667788754 543 35566765
No 163
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.22 E-value=2.4 Score=27.49 Aligned_cols=29 Identities=31% Similarity=0.608 Sum_probs=24.1
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCc
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEM 49 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~ 49 (198)
..|.|++|+..| ....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 359999999865 57789999999998764
No 164
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.37 E-value=4.4 Score=23.56 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=21.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTG-EKPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTT-CCCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 48899998755 45667888654 543 35566664
No 165
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.34 E-value=3.5 Score=24.01 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=22.0
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..|. ...|..|... |.. .++-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 488999988554 4667788654 543 35667764
No 166
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.27 E-value=3.3 Score=23.94 Aligned_cols=33 Identities=15% Similarity=0.112 Sum_probs=21.9
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |.. .++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHS-CCCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 48999998855 45667788654 543 35567765
No 167
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.27 E-value=1.7 Score=24.06 Aligned_cols=22 Identities=18% Similarity=0.537 Sum_probs=17.2
Q ss_pred eecCCCCccchhH--HHHHhhhhh
Q 029136 22 CFPCPFCYLEIEA--HMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD~--~~Lc~H~~e 43 (198)
.|.|+.|+..|.. ..|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHHh
Confidence 4999999987766 578888753
No 168
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.13 E-value=3.6 Score=23.88 Aligned_cols=33 Identities=15% Similarity=0.078 Sum_probs=22.3
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTG-ERPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSC-CCCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 48999998855 45678888754 543 35567764
No 169
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=71.11 E-value=0.85 Score=38.25 Aligned_cols=56 Identities=13% Similarity=0.205 Sum_probs=35.8
Q ss_pred ceeecCCCCccchhHHHHHhhhhhhcc-CCcccccccccccchh-hhHhhhHhhhhhhhhh
Q 029136 20 KACFPCPFCYLEIEAHMICSHLQEEHC-FEMKNAVCPLCAANLG-KDAAEHFMVQHASSLK 78 (198)
Q Consensus 20 r~~F~CPfC~e~fD~~~Lc~H~~eeH~-~e~k~vVCPVCa~~v~-~d~v~Hit~qH~~~~K 78 (198)
+-+|.||.|+.++...++.. .... .++.-..||-|...++ .-++..++++-|...+
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~~~~i~nQl~l~iR~~i~ 77 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFTPLQLTSQIEHSIRAHIS 77 (206)
T ss_dssp CEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred eeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 45899999988777666653 1111 3455678999999765 3455555555554443
No 170
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=70.89 E-value=0.35 Score=35.70 Aligned_cols=45 Identities=22% Similarity=0.534 Sum_probs=27.0
Q ss_pred CcceeecCCCCccchhHHH-------HHhhhhhhccCCcccccccccccchhh
Q 029136 18 DVKACFPCPFCYLEIEAHM-------ICSHLQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 18 d~r~~F~CPfC~e~fD~~~-------Lc~H~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
++...+.||.|.+.|.... .|..|...+-. .+...||+|...+..
T Consensus 48 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 48 KVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR-AQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred hCccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh-HCcCCCCCCCccCCC
Confidence 4456789999977554321 22334433322 345689999987653
No 171
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=70.71 E-value=3 Score=25.47 Aligned_cols=28 Identities=21% Similarity=0.542 Sum_probs=22.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEM 49 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~ 49 (198)
.|.|+.|+..| ....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 59999999865 56789999988887653
No 172
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.57 E-value=3.7 Score=23.74 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=22.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|++|+..| ....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCS-SSSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 48999998855 45678888754 543 35566764
No 173
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=70.56 E-value=3.5 Score=23.35 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=19.7
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..|. ...|..|... |..+ ++-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 488888887554 4567778654 4433 444554
No 174
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.38 E-value=3.7 Score=23.72 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=22.0
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQR-IHTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSS-CCSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence 48999998855 4567788875 4543 35566764
No 175
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=69.88 E-value=1.5 Score=31.19 Aligned_cols=31 Identities=13% Similarity=0.390 Sum_probs=23.0
Q ss_pred cceeecCCCCccchhHHHHHhhhhhhccCCcccccccccccch
Q 029136 19 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 61 (198)
Q Consensus 19 ~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 61 (198)
...+|.|+-|+.+|++. +...+.||-|..++
T Consensus 25 ~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 45789999999887653 23456899998753
No 176
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.76 E-value=0.13 Score=32.67 Aligned_cols=42 Identities=14% Similarity=0.176 Sum_probs=26.7
Q ss_pred eecCCCCccchhHHHHHhhhhhhccCCcccccccccccchh--hhHhhhHhh
Q 029136 22 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMV 71 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~--~d~v~Hit~ 71 (198)
.|.|+.|+..|....-..- .+.-.|++|...-. .++..|+..
T Consensus 18 ~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~ 61 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGN 61 (73)
T ss_dssp EEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSC
T ss_pred CeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHh
Confidence 5999999876643321111 56678999987533 466666643
No 177
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.52 E-value=4.1 Score=23.78 Aligned_cols=33 Identities=12% Similarity=0.187 Sum_probs=21.6
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..|- ...|..|+.. |.. .++-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSG-ERPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTS-CCSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCC-CCCCCCCC
Confidence 488999987554 4667788754 543 35566764
No 178
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.46 E-value=3.9 Score=23.80 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=22.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |.. .++-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 49999998855 45678888764 543 35667764
No 179
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=69.28 E-value=2.8 Score=21.15 Aligned_cols=20 Identities=15% Similarity=0.494 Sum_probs=13.3
Q ss_pred ecCCCCccchh-HHHHHhhhh
Q 029136 23 FPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 23 F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
|.|+.|+..|. ...|..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 67888877554 356666764
No 180
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.07 E-value=4.3 Score=23.52 Aligned_cols=33 Identities=15% Similarity=0.092 Sum_probs=22.0
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|++|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQV-IHTG-EKPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHT-TTCC-SCCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence 48999998855 4567888875 4543 35566764
No 181
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=68.15 E-value=0.46 Score=31.24 Aligned_cols=48 Identities=23% Similarity=0.639 Sum_probs=25.5
Q ss_pred ccCcceeecCCCCccchhHH-----HHHhhhhhhccCC---cccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAH-----MICSHLQEEHCFE---MKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~-----~Lc~H~~eeH~~e---~k~vVCPVCa~~v~~ 63 (198)
+++......||-|.+.|+.. --|.|.-=.++.. .++..||+|...+..
T Consensus 8 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 8 GTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp CCSTTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred cCcCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 34556678999997766421 1144421111111 123469999877543
No 182
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=67.97 E-value=1.4 Score=34.38 Aligned_cols=29 Identities=24% Similarity=0.494 Sum_probs=22.0
Q ss_pred ceeecCCCCccchhHHHHHhhhhhhccCCcccccccccccch
Q 029136 20 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 61 (198)
Q Consensus 20 r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 61 (198)
...|.|+-|+..|+.. .....||.|...+
T Consensus 130 ~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 130 KWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred cEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 3589999999888643 3346999998763
No 183
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.77 E-value=3.7 Score=23.80 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=21.7
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|++|+..|. ...|..|.. .|.. .++-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQR-IHTG-EKSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHT-TTSS-CCCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHH-HhCC-CCCCCCCC
Confidence 488999988554 456778865 4543 35566764
No 184
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.74 E-value=5 Score=23.14 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=21.2
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|... |.. .++-.|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 48899998755 45667778654 433 34556664
No 185
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.36 E-value=3.9 Score=23.81 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=21.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|++|+..| ....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQ-ETLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSS-CCSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 48999998754 45677888654 543 34566764
No 186
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=67.26 E-value=1.5 Score=38.36 Aligned_cols=39 Identities=23% Similarity=0.409 Sum_probs=25.0
Q ss_pred cceeecCCCCccc-------------hhHHHHHhhhhhhccCCcccccccc--cccchh
Q 029136 19 VKACFPCPFCYLE-------------IEAHMICSHLQEEHCFEMKNAVCPL--CAANLG 62 (198)
Q Consensus 19 ~r~~F~CPfC~e~-------------fD~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v~ 62 (198)
.+.+|.||.|.+- |+...+..++. +.....||+ |...+.
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~-----~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQ-----GYTTRDCPQAACSQVVS 231 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHST-----TCSCEECSGGGCSCEEC
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHH-----hCCCCCCCcccccCcCc
Confidence 3678999999653 33444444443 224578999 998755
No 187
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.11 E-value=2.4 Score=28.11 Aligned_cols=46 Identities=17% Similarity=0.382 Sum_probs=27.7
Q ss_pred cceeecCCCCccchhHH-HH-Hhh-----hhhhccCCcccccccccccchhhhHh
Q 029136 19 VKACFPCPFCYLEIEAH-MI-CSH-----LQEEHCFEMKNAVCPLCAANLGKDAA 66 (198)
Q Consensus 19 ~r~~F~CPfC~e~fD~~-~L-c~H-----~~eeH~~e~k~vVCPVCa~~v~~d~v 66 (198)
....+.||-|.+.+... .| |-| |....- .+...||+|...+..+.+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGAS--WLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCT--TCSSBCSSSCCBCCHHHH
T ss_pred CCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHH--HCCCcCcCcCchhCHhhc
Confidence 34568899997754432 11 444 333222 234689999999876554
No 188
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.67 E-value=4.7 Score=23.42 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=22.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|.. .|....++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence 48999998755 4467788874 4543135566764
No 189
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.79 E-value=1.2 Score=29.55 Aligned_cols=46 Identities=22% Similarity=0.534 Sum_probs=24.4
Q ss_pred cCcceeecCCCCccchhHHH-----HHhhhhhhccCC---cccccccccccchh
Q 029136 17 DDVKACFPCPFCYLEIEAHM-----ICSHLQEEHCFE---MKNAVCPLCAANLG 62 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~~-----Lc~H~~eeH~~e---~k~vVCPVCa~~v~ 62 (198)
.++.....||.|.++|.... -|.|.-=.++.. .++..||+|...+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 10 KELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CCCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred ccCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 45556788999977664221 144421111111 12347999977653
No 190
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=64.50 E-value=3.1 Score=29.62 Aligned_cols=30 Identities=20% Similarity=0.484 Sum_probs=22.8
Q ss_pred ccccccccccchh-----hhHhhhHhhhhhhhhhh
Q 029136 50 KNAVCPLCAANLG-----KDAAEHFMVQHASSLKR 79 (198)
Q Consensus 50 k~vVCPVCa~~v~-----~d~v~Hit~qH~~~~Kr 79 (198)
+.++|.+|-..+. .||..||...|...|+.
T Consensus 28 ~~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 28 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp SCCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred CEEECCCCCccccCCCChHhHHHHHHHHCHHHHHH
Confidence 4567777766543 59999999999888864
No 191
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.08 E-value=5.1 Score=23.35 Aligned_cols=33 Identities=18% Similarity=0.007 Sum_probs=20.7
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSS-CCCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 488888887554 4667778654 543 34555653
No 192
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=63.93 E-value=3.8 Score=24.63 Aligned_cols=24 Identities=25% Similarity=0.614 Sum_probs=19.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEH 45 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH 45 (198)
.|.|+.|+..| ....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 49999998855 5678899988776
No 193
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=63.81 E-value=3.2 Score=26.42 Aligned_cols=25 Identities=20% Similarity=0.424 Sum_probs=21.3
Q ss_pred ecCCCCcc-chhHHHHHhhhhhhccC
Q 029136 23 FPCPFCYL-EIEAHMICSHLQEEHCF 47 (198)
Q Consensus 23 F~CPfC~e-~fD~~~Lc~H~~eeH~~ 47 (198)
--|-||-. .-|+-.|..|+.+.|-.
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35999965 88999999999999964
No 194
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.52 E-value=6.8 Score=22.70 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=22.1
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTG-EKPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSS-SCCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence 48999998865 4567788864 4543 35566764
No 195
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=63.25 E-value=2 Score=31.62 Aligned_cols=35 Identities=20% Similarity=0.605 Sum_probs=20.7
Q ss_pred cceeecCCCCcc--chhHHHHHhhhhhhccCCcccccccccccc
Q 029136 19 VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 19 ~r~~F~CPfC~e--~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
+-..|.||||+- .+.+. -......-.+.|-+|...
T Consensus 20 L~t~F~CPfCnh~~sV~vk-------idk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 20 LETQFTCPFCNHEKSCDVK-------MDRARNTGVISCTVCLEE 56 (85)
T ss_dssp CSSCCCCTTTCCSSCEEEE-------EETTTTEEEEEESSSCCE
T ss_pred CCCeEcCCCCCCCCeEEEE-------EEccCCEEEEEcccCCCe
Confidence 456899999953 23222 212222334679999876
No 196
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.74 E-value=4.7 Score=23.42 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=19.3
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCcccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 56 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCPV 56 (198)
.|.|+.|+..|. ...|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSR-EKSSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHH-TTCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 488888877544 4566777654 432 24455653
No 197
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=62.43 E-value=1.6 Score=27.73 Aligned_cols=42 Identities=21% Similarity=0.663 Sum_probs=24.1
Q ss_pred eecCCCCccchhHHH---------HHhhhhhhccCC---cccccccccccchhh
Q 029136 22 CFPCPFCYLEIEAHM---------ICSHLQEEHCFE---MKNAVCPLCAANLGK 63 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~---------Lc~H~~eeH~~e---~k~vVCPVCa~~v~~ 63 (198)
.+.||-|.+.+.... -|-|.-=..+.+ .++..||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 478999988776541 243421111111 125689999887664
No 198
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=61.93 E-value=0.7 Score=35.92 Aligned_cols=46 Identities=20% Similarity=0.518 Sum_probs=27.9
Q ss_pred CcceeecCCCCccchhHHH-------HHhhhhhhccCCcccccccccccchhhh
Q 029136 18 DVKACFPCPFCYLEIEAHM-------ICSHLQEEHCFEMKNAVCPLCAANLGKD 64 (198)
Q Consensus 18 d~r~~F~CPfC~e~fD~~~-------Lc~H~~eeH~~e~k~vVCPVCa~~v~~d 64 (198)
++...+.||.|.+.|.... .|..|...+-. .....||+|...+..+
T Consensus 74 ~l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 74 KLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFK-AQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCTT
T ss_pred hCccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHH-hCCCcCCCCCccCCCC
Confidence 4567799999976544321 23334444432 2345899999987753
No 199
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=61.88 E-value=0.53 Score=29.51 Aligned_cols=39 Identities=28% Similarity=0.824 Sum_probs=19.9
Q ss_pred ecCCCCccchhH----HHH--HhhhhhhccCC---cccccccccccch
Q 029136 23 FPCPFCYLEIEA----HMI--CSHLQEEHCFE---MKNAVCPLCAANL 61 (198)
Q Consensus 23 F~CPfC~e~fD~----~~L--c~H~~eeH~~e---~k~vVCPVCa~~v 61 (198)
..||-|.++++. ..| |.|.-=.++.. .++..||+|...+
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 567777665543 222 44432111211 2356799997654
No 200
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.73 E-value=6.8 Score=22.21 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=19.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..| ....|..|... |..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 48888888754 44667777654 4432 444553
No 201
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=61.62 E-value=2.3 Score=32.07 Aligned_cols=13 Identities=38% Similarity=0.766 Sum_probs=10.9
Q ss_pred eeecCCCCccchh
Q 029136 21 ACFPCPFCYLEIE 33 (198)
Q Consensus 21 ~~F~CPfC~e~fD 33 (198)
..|.||-|+|+|-
T Consensus 50 F~FkCP~CgEEFy 62 (95)
T 2k5c_A 50 FVFKCPVCGEEFY 62 (95)
T ss_dssp SEEECTTTCCEEE
T ss_pred HhhcCCCccHHHh
Confidence 4799999999773
No 202
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.51 E-value=7.2 Score=22.54 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=24.6
Q ss_pred eecCC--CCccch-hHHHHHhhhhhhccCCccccccccc
Q 029136 22 CFPCP--FCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 57 (198)
Q Consensus 22 ~F~CP--fC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVC 57 (198)
.|.|+ .|+..| ....|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 48997 798855 45778888765 543 466789888
No 203
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=60.97 E-value=3.7 Score=20.95 Aligned_cols=21 Identities=19% Similarity=0.548 Sum_probs=13.9
Q ss_pred eecCCCCccchh-HHHHHhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
.|.|+.|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 378888887554 356666654
No 204
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.77 E-value=8.2 Score=24.77 Aligned_cols=29 Identities=24% Similarity=0.543 Sum_probs=23.8
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhccCCc
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHCFEM 49 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~ 49 (198)
..|.|++|+..| ....|..|+...|..+.
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~ 66 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred cccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence 359999999865 56789999999998764
No 205
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=60.53 E-value=7 Score=31.36 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=25.9
Q ss_pred cCcceeecCCCCcc------------chhHHHHHhhhhhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCYL------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e------------~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.++-..|.||.|.+ .|+...+..|+... ...||+|...+..
T Consensus 203 ~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLTQ 255 (281)
T ss_dssp CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCCG
T ss_pred CCCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCch
Confidence 34556799998754 34455555665432 2249999988653
No 206
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=60.45 E-value=5.7 Score=20.09 Aligned_cols=21 Identities=19% Similarity=0.494 Sum_probs=14.3
Q ss_pred ecCCCCccchh-HHHHHhhhhh
Q 029136 23 FPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 23 F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
|.|+.|+..|. ...|..|...
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHHH
Confidence 78888887554 4566777654
No 207
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=59.78 E-value=4.8 Score=25.01 Aligned_cols=26 Identities=31% Similarity=0.844 Sum_probs=20.7
Q ss_pred eeecCCCCccch-hHHHHHhhhhhhcc
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQEEHC 46 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~eeH~ 46 (198)
..|.|++|+..| ....|..|+...|.
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 359999999866 55789999988774
No 208
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.32 E-value=6.7 Score=22.73 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=19.8
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..|. ...|..|... |.- .++-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSG-EKPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCC-SCCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 488888877554 4567777654 433 3445565
No 209
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=59.21 E-value=5.5 Score=20.07 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=14.4
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 37888888755 35566777643
No 210
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=62.71 E-value=2.1 Score=21.74 Aligned_cols=20 Identities=15% Similarity=0.486 Sum_probs=13.1
Q ss_pred ecCCCCccchhH-HHHHhhhh
Q 029136 23 FPCPFCYLEIEA-HMICSHLQ 42 (198)
Q Consensus 23 F~CPfC~e~fD~-~~Lc~H~~ 42 (198)
|.|+.|+..|.. ..|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 778888876543 55666653
No 211
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=62.70 E-value=2.1 Score=22.16 Aligned_cols=20 Identities=20% Similarity=0.493 Sum_probs=13.1
Q ss_pred ecCCCCccchh-HHHHHhhhh
Q 029136 23 FPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 23 F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
|.|+.|+..|. ...|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 77888877553 455666654
No 212
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.98 E-value=8.4 Score=22.29 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=20.1
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..|. ...|..|... |.. .++-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTG-ERSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSS-CCSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 488888887554 4667778654 533 3455565
No 213
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.98 E-value=5.9 Score=21.55 Aligned_cols=23 Identities=26% Similarity=0.572 Sum_probs=16.5
Q ss_pred eeecCCCCccch-hHHHHHhhhhh
Q 029136 21 ACFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 21 ~~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
..|.|++|+..| ....|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCEECCCCCceeCCHHHHHHHHHH
Confidence 359999998865 45667777653
No 214
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=57.93 E-value=0.87 Score=32.36 Aligned_cols=47 Identities=23% Similarity=0.574 Sum_probs=27.3
Q ss_pred cCcceeecCCCCccchhHHH--HHhh-----hhhhccCC-cccccccccccchhh
Q 029136 17 DDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFE-MKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e-~k~vVCPVCa~~v~~ 63 (198)
+++...+.||.|.+.+.... -|-| |...+-.. .....||+|...+..
T Consensus 16 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 16 NAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred HhccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 45667899999977554321 1333 33333222 123589999987664
No 215
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.61 E-value=9.2 Score=21.63 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=18.9
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..|. ...|..|.. .|..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR-THTGE-SGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT-TTCCS-SSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhh-hcCCC-CCCCCC
Confidence 488888877544 456777764 35332 344453
No 216
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=57.36 E-value=6.2 Score=23.70 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=15.0
Q ss_pred ecCCCCccch-hHHHHHhhhhhhccCCcc
Q 029136 23 FPCPFCYLEI-EAHMICSHLQEEHCFEMK 50 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k 50 (198)
|.|+.|+..| ....|..|+...|.-+..
T Consensus 8 ~~C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 8 YACDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp EECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred EECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 6777776644 345566666545554433
No 217
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=57.06 E-value=0.77 Score=32.89 Aligned_cols=46 Identities=26% Similarity=0.563 Sum_probs=28.0
Q ss_pred cCcceeecCCCCccchhHHHH---Hhh-----hhhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCYLEIEAHMI---CSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~~L---c~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
+.+...+.||.|.+.|..... |-| |...+-.. +...||+|...+..
T Consensus 17 ~~l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 17 ESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTE-QRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHH-TCSBCTTTCCBCCG
T ss_pred ccCCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHH-CcCCCCCCCCcCCH
Confidence 456778999999775553322 333 33332221 22689999998764
No 218
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.98 E-value=7.6 Score=24.50 Aligned_cols=27 Identities=19% Similarity=0.499 Sum_probs=21.5
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCC
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFE 48 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e 48 (198)
.|.|++|+..| ....|..|+...|.-.
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence 49999998855 5678999998877643
No 219
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=56.85 E-value=6.1 Score=20.05 Aligned_cols=21 Identities=24% Similarity=0.562 Sum_probs=14.0
Q ss_pred ecCCCCccch-hHHHHHhhhhh
Q 029136 23 FPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
|.|+.|+..| ....|..|...
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTG
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 7888887755 34566677643
No 220
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=56.76 E-value=2.9 Score=30.16 Aligned_cols=46 Identities=17% Similarity=0.410 Sum_probs=27.7
Q ss_pred cCcceeecCCCCccchhHHH--HHhh-----hhhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
......|.||.|.+.+.... -|-| |....- +.....||+|...+..
T Consensus 10 ~~~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 10 IPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp CCCHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred cCCCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 34556799999976544221 2444 333332 2235789999998763
No 221
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=56.73 E-value=1.5 Score=31.46 Aligned_cols=45 Identities=20% Similarity=0.422 Sum_probs=27.2
Q ss_pred cCcceeecCCCCccchhH-HHH--Hhh-----hhhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCYLEIEA-HMI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~-~~L--c~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
+++...+.||.|.+.+.. ..+ |-| |...+-.. ...||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 10 TELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET--SKYCPICDVQVHK 62 (108)
T ss_dssp HHHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS--CSBCTTTCCBSCS
T ss_pred hccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh--CCcCcCCCccccc
Confidence 355667999999764432 222 333 44433322 3789999988653
No 222
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.60 E-value=8.8 Score=22.19 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=20.0
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..| ....|..|... |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTG-ERHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTC-CCBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCC-CCCCCCC
Confidence 48888888755 45667778654 543 2445554
No 223
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=56.31 E-value=6.9 Score=19.74 Aligned_cols=22 Identities=18% Similarity=0.514 Sum_probs=15.9
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 48899998865 45667788653
No 224
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=56.22 E-value=5.3 Score=20.04 Aligned_cols=20 Identities=25% Similarity=0.632 Sum_probs=12.7
Q ss_pred ecCCCCccch-hHHHHHhhhh
Q 029136 23 FPCPFCYLEI-EAHMICSHLQ 42 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~ 42 (198)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHHH
Confidence 6788887755 3445666654
No 225
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.08 E-value=2 Score=28.18 Aligned_cols=44 Identities=16% Similarity=0.476 Sum_probs=25.9
Q ss_pred cCcceeecCCCCccchhHHHH-Hhh-----hhhhccCCcccccccccccchh
Q 029136 17 DDVKACFPCPFCYLEIEAHMI-CSH-----LQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~~L-c~H-----~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
+++...+.||-|.+.+....+ |-| |....- .+...||+|...+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 10 KQLTDEEECCICMDGRADLILPCAHSFCQKCIDKWS--DRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSS--CCCSSCHHHHHCTT
T ss_pred hcCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHH--HCcCcCCCcCCccc
Confidence 455667899999775433222 333 333221 25678999976654
No 226
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.29 E-value=11 Score=21.40 Aligned_cols=32 Identities=13% Similarity=0.302 Sum_probs=19.8
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..|. ...|..|.. .|.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~ 44 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQK-THAA-KSGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGG-GGCC-CCCTTCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCC-CCCcCCC
Confidence 488999987554 466777875 4543 2344453
No 227
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=54.47 E-value=9 Score=20.82 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=15.8
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 499999988554 4667777643
No 228
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.41 E-value=12 Score=20.87 Aligned_cols=24 Identities=17% Similarity=0.447 Sum_probs=15.4
Q ss_pred eecCCCCccch-hHHHHHhhhhhhcc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHC 46 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~ 46 (198)
.|.|+.|+..| ....|..|... |.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 34 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HT 34 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TS
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hC
Confidence 37888887754 34567777653 44
No 229
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=54.22 E-value=7.7 Score=19.63 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=14.6
Q ss_pred eecCCCCccchh-HHHHHhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
.|.|+.|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHH
Confidence 488999988654 456667754
No 230
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=53.42 E-value=8 Score=20.58 Aligned_cols=22 Identities=23% Similarity=0.587 Sum_probs=16.0
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 489999988554 4677778764
No 231
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.39 E-value=8.8 Score=21.28 Aligned_cols=25 Identities=16% Similarity=0.393 Sum_probs=18.0
Q ss_pred eecCCCCccchh-HHHHHhhhhhhcc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHC 46 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~ 46 (198)
.|.|+.|+..|. ...|..|....|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 499999988664 5678888545554
No 232
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.34 E-value=3.4 Score=29.71 Aligned_cols=16 Identities=19% Similarity=0.248 Sum_probs=12.3
Q ss_pred hhHhhhHhhhhhhhhh
Q 029136 63 KDAAEHFMVQHASSLK 78 (198)
Q Consensus 63 ~d~v~Hit~qH~~~~K 78 (198)
.+|..||..-|..-|+
T Consensus 49 S~L~rHL~~~H~~e~~ 64 (76)
T 2djr_A 49 TALWKHLKSMHREELE 64 (76)
T ss_dssp CHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHCHHHHH
Confidence 4788888887877775
No 233
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.33 E-value=9.3 Score=21.91 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=20.1
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..|- ...|..|+.. |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTG-KKPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCC-CCCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 488999987544 4667778653 433 3445565
No 234
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.58 E-value=9 Score=20.61 Aligned_cols=22 Identities=23% Similarity=0.531 Sum_probs=16.2
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|++|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 499999988665 4667788653
No 235
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.44 E-value=7.1 Score=21.26 Aligned_cols=22 Identities=27% Similarity=0.751 Sum_probs=16.3
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 499999988554 4667788764
No 236
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=51.37 E-value=10 Score=20.30 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=16.3
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 48999998866 45677778654
No 237
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=51.33 E-value=1.1 Score=31.53 Aligned_cols=44 Identities=27% Similarity=0.660 Sum_probs=24.6
Q ss_pred cceeecCCCCccchhHH-----HHHhhhhhhccCC---cccccccccccchh
Q 029136 19 VKACFPCPFCYLEIEAH-----MICSHLQEEHCFE---MKNAVCPLCAANLG 62 (198)
Q Consensus 19 ~r~~F~CPfC~e~fD~~-----~Lc~H~~eeH~~e---~k~vVCPVCa~~v~ 62 (198)
......||-|.++|... --|.|.-=.++.+ .++..||+|...+.
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred cCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 34567899997766431 1144432222221 13568999987654
No 238
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=51.08 E-value=4.2 Score=29.69 Aligned_cols=30 Identities=17% Similarity=0.356 Sum_probs=20.3
Q ss_pred cceeecCCCCccc--hhHHHHHhhhhhhccCCcccccccccccch
Q 029136 19 VKACFPCPFCYLE--IEAHMICSHLQEEHCFEMKNAVCPLCAANL 61 (198)
Q Consensus 19 ~r~~F~CPfC~e~--fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 61 (198)
....|+||||+.+ ++.. .....||-|-...
T Consensus 24 q~~~y~Cp~CG~~~v~r~a-------------tGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 24 MNEDHACPNCGEDRVDRQG-------------TGIWQCSYCDYKF 55 (83)
T ss_dssp HHSCEECSSSCCEEEEEEE-------------TTEEEETTTCCEE
T ss_pred ccccCcCCCCCCcceeccC-------------CCeEECCCCCCEe
Confidence 3468999999763 2322 3456799998863
No 239
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=50.59 E-value=1.5 Score=31.70 Aligned_cols=47 Identities=15% Similarity=0.288 Sum_probs=27.6
Q ss_pred ccCcceeecCCCCccchhHHH--HHhh-----hhhhccCCcccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.+++...|.||.|.+.+.... -|-| |....-. .....||+|...+..
T Consensus 17 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 17 PAHFVKSISCQICEHILADPVETSCKHLFCRICILRCLK-VMGSYCPSCRYPCFP 70 (116)
T ss_dssp CHHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH-HTCSBCTTTCCBCCG
T ss_pred HHhccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHh-HCcCcCCCCCCCCCH
Confidence 356778899999977554321 1222 2222211 124579999998764
No 240
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=50.27 E-value=6.3 Score=26.62 Aligned_cols=12 Identities=33% Similarity=0.847 Sum_probs=6.7
Q ss_pred cceeecCCCCcc
Q 029136 19 VKACFPCPFCYL 30 (198)
Q Consensus 19 ~r~~F~CPfC~e 30 (198)
.-++-.||||+.
T Consensus 20 ~lP~IrCpyCGy 31 (48)
T 4ayb_P 20 VLPGVRCPYCGY 31 (48)
T ss_dssp CCSSSCCTTTCC
T ss_pred hCCCcccCccCc
Confidence 345666666643
No 241
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.20 E-value=15 Score=20.96 Aligned_cols=22 Identities=14% Similarity=0.224 Sum_probs=14.7
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 488888877554 4567777654
No 242
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=50.16 E-value=10 Score=25.40 Aligned_cols=47 Identities=23% Similarity=0.667 Sum_probs=30.8
Q ss_pred eeecCC-CCccchhHHHHHhhhhhhccCCcccccccccccchh-hhHhhhH
Q 029136 21 ACFPCP-FCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG-KDAAEHF 69 (198)
Q Consensus 21 ~~F~CP-fC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~-~d~v~Hi 69 (198)
..-.|| .|++.+-...|-.|+..+ + ..+.+.|+-|...+. .++-.|.
T Consensus 15 ~~v~C~~~C~~~v~r~~l~~H~~~~-C-~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 15 NVIPCPNRCPMKLSRRDLPAHLQHD-C-PKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp SCCBCTTCCSCBCCSSSSTTTTTTS-C-TTSCCCCSSSCCCCCHHHHHHTT
T ss_pred cccCCCccccHHhhHhHHHhhCHhh-C-CCcceECCCCCCccCHHHHHHHH
Confidence 346675 688777777777777543 2 235678888887654 4666665
No 243
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=49.95 E-value=6.9 Score=26.12 Aligned_cols=7 Identities=57% Similarity=1.682 Sum_probs=3.4
Q ss_pred ccccccc
Q 029136 53 VCPLCAA 59 (198)
Q Consensus 53 VCPVCa~ 59 (198)
+||+|.+
T Consensus 38 ~CP~Cg~ 44 (52)
T 1e8j_A 38 ACPVCGA 44 (52)
T ss_dssp CCSSSCC
T ss_pred cCCCCCC
Confidence 4555544
No 244
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.02 E-value=12 Score=21.32 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=14.6
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT 34 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHhHh
Confidence 388888877544 4567777654
No 245
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.87 E-value=11 Score=21.33 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=19.0
Q ss_pred eecCCCCccchh-HHHHHhhhhhhccCCccccccc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 55 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~~e~k~vVCP 55 (198)
.|.|+.|+..|. ...|..|... |.. .++-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSG-QSGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSS-SCSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCC-CCCCCCC
Confidence 488888887554 4567777653 433 2344453
No 246
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.76 E-value=9.9 Score=20.60 Aligned_cols=22 Identities=18% Similarity=0.513 Sum_probs=16.1
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 49999998866 45667778643
No 247
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=48.56 E-value=3.2 Score=29.94 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=11.0
Q ss_pred cCcceeecCCCCcc
Q 029136 17 DDVKACFPCPFCYL 30 (198)
Q Consensus 17 dd~r~~F~CPfC~e 30 (198)
......|.||||+.
T Consensus 21 ~~q~~ky~C~fCgk 34 (72)
T 3jyw_9 21 IQQHARYDCSFCGK 34 (72)
T ss_dssp HHHHSCBCCSSCCS
T ss_pred HHhccCccCCCCCC
Confidence 34567899999976
No 248
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=48.51 E-value=6.8 Score=29.25 Aligned_cols=30 Identities=23% Similarity=0.474 Sum_probs=22.3
Q ss_pred CcceeecCCCCccchhHHHHHhhhhhhccCCcccc-cccccccc
Q 029136 18 DVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNA-VCPLCAAN 60 (198)
Q Consensus 18 d~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~v-VCPVCa~~ 60 (198)
+....|.|+-|+..|... .... .||.|...
T Consensus 69 ~~p~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp EECCEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred eccceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 445689999999877761 2346 89999875
No 249
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=48.38 E-value=1.7 Score=28.30 Aligned_cols=40 Identities=20% Similarity=0.574 Sum_probs=24.2
Q ss_pred eecCCCCccchhHHH---------HHhh-----hhhhccCCcccccccccccchhh
Q 029136 22 CFPCPFCYLEIEAHM---------ICSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~---------Lc~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
++.||-|.+.+.... -|-| |-...-. +...||+|...+..
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKINH 63 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCCBCCC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--cCCCCCCCCCccCh
Confidence 588999988776541 1333 3222211 23589999887653
No 250
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=48.22 E-value=4.7 Score=25.83 Aligned_cols=41 Identities=27% Similarity=0.589 Sum_probs=25.6
Q ss_pred eecCCCCccchhHHH--HHhhhhhhccCCcccccccccccchh
Q 029136 22 CFPCPFCYLEIEAHM--ICSHLQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~--Lc~H~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
.+.||.|.+.|.... =|-|.-=..+.......||+|...+.
T Consensus 6 ~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 6 FLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred CCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 477999977554321 14454334445446678999988754
No 251
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=48.18 E-value=3.3 Score=30.60 Aligned_cols=14 Identities=21% Similarity=0.619 Sum_probs=11.0
Q ss_pred cCcceeecCCCCcc
Q 029136 17 DDVKACFPCPFCYL 30 (198)
Q Consensus 17 dd~r~~F~CPfC~e 30 (198)
....+.|.||||+.
T Consensus 30 ~~q~~ky~CpfCGk 43 (83)
T 3j21_i 30 AKMRQKHTCPVCGR 43 (83)
T ss_dssp HHHHSCBCCSSSCS
T ss_pred HHhhcccCCCCCCC
Confidence 34567899999976
No 252
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=48.02 E-value=18 Score=26.14 Aligned_cols=47 Identities=19% Similarity=0.451 Sum_probs=27.5
Q ss_pred ccCcceeecCCCCccchhHHH--HHhh-----hhhhccCCcccccccccccchhh
Q 029136 16 DDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
.+.+...|.||.|.+.+.... -|-| |....-. .++..||+|...+..
T Consensus 12 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 12 DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR-DAGHKCPVDNEILLE 65 (118)
T ss_dssp SSCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH-HHCSBCTTTCCBCCG
T ss_pred ccCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHh-hCCCCCCCCCCCcCH
Confidence 456778899999977554321 1333 2222211 122389999988764
No 253
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.00 E-value=1.3 Score=29.62 Aligned_cols=43 Identities=28% Similarity=0.758 Sum_probs=24.4
Q ss_pred ceeecCCCCccchhHH----HH-HhhhhhhccCCc---ccccccccccchh
Q 029136 20 KACFPCPFCYLEIEAH----MI-CSHLQEEHCFEM---KNAVCPLCAANLG 62 (198)
Q Consensus 20 r~~F~CPfC~e~fD~~----~L-c~H~~eeH~~e~---k~vVCPVCa~~v~ 62 (198)
.....||-|.++|+.. .| |.|.-=.++... ++..||+|...+.
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 3456899998766532 12 555422222221 3458999987654
No 254
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.77 E-value=5.6 Score=27.79 Aligned_cols=48 Identities=21% Similarity=0.421 Sum_probs=29.2
Q ss_pred eecCCCCccchhHHHH-----Hhh-----hhhhccC----C--cccccccc--cccc--hhhhHhhhH
Q 029136 22 CFPCPFCYLEIEAHMI-----CSH-----LQEEHCF----E--MKNAVCPL--CAAN--LGKDAAEHF 69 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~L-----c~H-----~~eeH~~----e--~k~vVCPV--Ca~~--v~~d~v~Hi 69 (198)
.|.||-|.+++..... |-| |-..|-. + ..+..||. |... +..+.+..+
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 5789999776654322 444 3222221 1 13568999 9998 887776654
No 255
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=47.23 E-value=3.6 Score=29.65 Aligned_cols=14 Identities=29% Similarity=0.664 Sum_probs=11.0
Q ss_pred cCcceeecCCCCcc
Q 029136 17 DDVKACFPCPFCYL 30 (198)
Q Consensus 17 dd~r~~F~CPfC~e 30 (198)
......|.||||+.
T Consensus 22 ~~q~~ky~C~fCgk 35 (73)
T 1ffk_W 22 IKHKKKYKCPVCGF 35 (73)
T ss_pred HhcccCccCCCCCC
Confidence 44567899999976
No 256
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=46.51 E-value=1.4 Score=31.63 Aligned_cols=12 Identities=17% Similarity=0.498 Sum_probs=9.1
Q ss_pred ecCCCCccchhH
Q 029136 23 FPCPFCYLEIEA 34 (198)
Q Consensus 23 F~CPfC~e~fD~ 34 (198)
..||-|.++|..
T Consensus 26 ~~C~ICl~~~~~ 37 (114)
T 1v87_A 26 EDCIICMEKLAV 37 (114)
T ss_dssp CEETTTTEETTS
T ss_pred CcCccCChhhcC
Confidence 579999877744
No 257
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=51.16 E-value=4.5 Score=20.70 Aligned_cols=21 Identities=14% Similarity=0.429 Sum_probs=13.9
Q ss_pred eecCCCCccchh-HHHHHhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
.|.|+.|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 378999987654 345666654
No 258
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.98 E-value=12 Score=21.43 Aligned_cols=22 Identities=23% Similarity=0.468 Sum_probs=14.0
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHHHH
Confidence 37788887754 34566677643
No 259
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.45 E-value=20 Score=19.93 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=13.4
Q ss_pred eecCCCCccchh-HHHHHhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
.|.|+.|+..|. ...|..|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIR 32 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGG
T ss_pred CeeCCCccchhCCHHHHHHHHH
Confidence 377888876443 455666764
No 260
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=44.44 E-value=10 Score=19.39 Aligned_cols=21 Identities=19% Similarity=0.578 Sum_probs=14.2
Q ss_pred eecCCCCccchh-HHHHHhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
.|.|+.|+..|- ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 378999987554 455667754
No 261
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=44.26 E-value=8.1 Score=32.97 Aligned_cols=25 Identities=20% Similarity=0.389 Sum_probs=22.9
Q ss_pred cceeecCCCCccchhHHHHHhhhhh
Q 029136 19 VKACFPCPFCYLEIEAHMICSHLQE 43 (198)
Q Consensus 19 ~r~~F~CPfC~e~fD~~~Lc~H~~e 43 (198)
+|+-|.|-.|+..+|+..|..|+..
T Consensus 151 FWQFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 151 FWQFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EEEEEECTTTCCEEEGGGHHHHHHT
T ss_pred EEEEEehhhcCceecHHHHHHHHHH
Confidence 6899999999999999999999864
No 262
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.20 E-value=14 Score=19.74 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=16.3
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHHH
Confidence 489999988664 5667788643
No 263
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=43.60 E-value=8.6 Score=31.07 Aligned_cols=51 Identities=27% Similarity=0.543 Sum_probs=17.2
Q ss_pred eecCCC----CccchhHHHHHhhhhhhccCCcccccccc----cccc-hhhhHhhhHhhhhhh
Q 029136 22 CFPCPF----CYLEIEAHMICSHLQEEHCFEMKNAVCPL----CAAN-LGKDAAEHFMVQHAS 75 (198)
Q Consensus 22 ~F~CPf----C~e~fD~~~Lc~H~~eeH~~e~k~vVCPV----Ca~~-v~~d~v~Hit~qH~~ 75 (198)
.||||| |.+.+--.+...|-+. -.-++--||+ |.-. ...++..|++..|+.
T Consensus 6 ~~pC~~~~~GC~~~~~y~~~~~He~~---C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~~H~~ 65 (193)
T 2a25_A 6 LFPCKYASSGCEITLPHTEKADHEEL---CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 65 (193)
T ss_dssp ---------------------------------CEECCCC--CCCCEECSTTHHHHHHHHCTT
T ss_pred EecCCCCCCCCCcccccccccchhhc---CCCCCccCCCCCCCCcCCCCHHHHHHHHHHHCCC
Confidence 588888 7777766666666532 1124556776 7653 225889999888874
No 264
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=43.06 E-value=4.4 Score=30.47 Aligned_cols=15 Identities=20% Similarity=0.352 Sum_probs=11.2
Q ss_pred cCcceeecCCCCccc
Q 029136 17 DDVKACFPCPFCYLE 31 (198)
Q Consensus 17 dd~r~~F~CPfC~e~ 31 (198)
......|.||||+..
T Consensus 31 ~~q~~ky~CpfCgk~ 45 (92)
T 3iz5_m 31 VSQHSKYFCEFCGKF 45 (92)
T ss_dssp HHHHSCBCCTTTCSS
T ss_pred HHHhccccCcccCCC
Confidence 345678999999863
No 265
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=42.81 E-value=14 Score=19.97 Aligned_cols=20 Identities=25% Similarity=0.710 Sum_probs=13.1
Q ss_pred ecCCCCccch-hHHHHHhhhh
Q 029136 23 FPCPFCYLEI-EAHMICSHLQ 42 (198)
Q Consensus 23 F~CPfC~e~f-D~~~Lc~H~~ 42 (198)
|.|+.|+..| ....|..|+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 6788887754 4456666754
No 266
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=42.73 E-value=4.4 Score=30.51 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=10.9
Q ss_pred cCcceeecCCCCcc
Q 029136 17 DDVKACFPCPFCYL 30 (198)
Q Consensus 17 dd~r~~F~CPfC~e 30 (198)
....+.|.||||+.
T Consensus 31 ~~q~~ky~CpfCgk 44 (92)
T 3izc_m 31 IQQHARYDCSFCGK 44 (92)
T ss_dssp HHHHSCCCCSSSCS
T ss_pred HHHhcCCcCCCCCC
Confidence 34567899999976
No 267
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=42.19 E-value=1.2 Score=34.29 Aligned_cols=45 Identities=22% Similarity=0.450 Sum_probs=27.2
Q ss_pred cCcceeecCCCCccchhHH-HH--Hhh-----hhhhccCCcccccccccccchh
Q 029136 17 DDVKACFPCPFCYLEIEAH-MI--CSH-----LQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~-~L--c~H-----~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
+++...+.||.|.+.|... .+ |-| |....-. .....||+|...+.
T Consensus 49 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 49 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALR-SGNKECPTCRKKLV 101 (165)
T ss_dssp -CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH-TTCCBCTTTCCBCC
T ss_pred hhCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH-hCcCCCCCCCCcCC
Confidence 4566789999997755432 22 444 3333321 23678999998864
No 268
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=41.70 E-value=3.3 Score=31.82 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=26.5
Q ss_pred cCcceeecCCCCccchhHH--HHHhh-----hhhhccCCcccccccccccch
Q 029136 17 DDVKACFPCPFCYLEIEAH--MICSH-----LQEEHCFEMKNAVCPLCAANL 61 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~--~Lc~H-----~~eeH~~e~k~vVCPVCa~~v 61 (198)
+.+...|.||-|.+-|... --|-| |....- ..++..||+|...+
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~-~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASIL-SSGPQNCAACVHEG 76 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHG-GGSCEECHHHHHTT
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHH-hcCCCCCCCCCCcc
Confidence 5677889999997644322 12333 444332 23446899998753
No 269
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.77 E-value=15 Score=19.81 Aligned_cols=22 Identities=14% Similarity=0.288 Sum_probs=15.4
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 599999988554 4557777643
No 270
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=40.77 E-value=3.4 Score=26.78 Aligned_cols=41 Identities=24% Similarity=0.484 Sum_probs=23.1
Q ss_pred eecCCCCcc-chhHHH------HHhh-----hhhhccCCcccccccccccchhh
Q 029136 22 CFPCPFCYL-EIEAHM------ICSH-----LQEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 22 ~F~CPfC~e-~fD~~~------Lc~H-----~~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
++.||.|.+ .+.... =|-| |.+..-. .+...||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-RGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-TTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-cCCCcCCCCCCcccc
Confidence 367888866 443331 1333 4443322 235679999987664
No 271
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=39.89 E-value=11 Score=23.94 Aligned_cols=22 Identities=18% Similarity=0.357 Sum_probs=16.0
Q ss_pred eeecCCCCccchhHHHHHhhhh
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQ 42 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~ 42 (198)
..|.||-|++.|.+...-+|.+
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CCcccccccCcCCcccccchhh
Confidence 4578888888777776666654
No 272
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.96 E-value=19 Score=20.08 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=17.4
Q ss_pred eecCCCCccchh-HHHHHhhhhhhcc
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQEEHC 46 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~eeH~ 46 (198)
.|.|+.|+..|. ...|..|... |.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 34 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERI-HT 34 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGG-CC
T ss_pred CeECCCCCCCcCCHHHHHHHHHH-hC
Confidence 499999988664 4667888653 53
No 273
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=38.70 E-value=8.5 Score=29.53 Aligned_cols=13 Identities=38% Similarity=0.864 Sum_probs=10.5
Q ss_pred CcceeecCCCCcc
Q 029136 18 DVKACFPCPFCYL 30 (198)
Q Consensus 18 d~r~~F~CPfC~e 30 (198)
.....|.||||+.
T Consensus 32 ~q~aky~CpfCgk 44 (103)
T 4a17_Y 32 TQHAKYGCPFCGK 44 (103)
T ss_dssp HHHSCEECTTTCC
T ss_pred HhhcCCCCCCCCC
Confidence 4467899999976
No 274
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=38.52 E-value=8.7 Score=28.07 Aligned_cols=20 Identities=20% Similarity=0.620 Sum_probs=15.1
Q ss_pred eecCCCCccchhHHHHHhhh
Q 029136 22 CFPCPFCYLEIEAHMICSHL 41 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~Lc~H~ 41 (198)
.--||||+--+.-.||..|.
T Consensus 30 ~NiCPYC~nRls~eGl~RHV 49 (77)
T 2l7x_A 30 YNICPYCASRLTSDGLARHV 49 (77)
T ss_dssp TTCCTTTCCCCCTTTHHHHH
T ss_pred cccChhhhccCCccchhhhc
Confidence 34688887777777888886
No 275
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=38.10 E-value=2.6 Score=30.70 Aligned_cols=46 Identities=22% Similarity=0.488 Sum_probs=27.7
Q ss_pred cCcceeecCCCCccch-hHHHH--HhhhhhhccCCccc-ccccccccchh
Q 029136 17 DDVKACFPCPFCYLEI-EAHMI--CSHLQEEHCFEMKN-AVCPLCAANLG 62 (198)
Q Consensus 17 dd~r~~F~CPfC~e~f-D~~~L--c~H~~eeH~~e~k~-vVCPVCa~~v~ 62 (198)
+++...+.||.|.+.| +-+.| |-|.-=..+...-. ..||+|...+.
T Consensus 17 ~~l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 17 DRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred HhchhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 4456789999997744 33333 55533333332211 67999998865
No 276
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=37.76 E-value=9.7 Score=27.98 Aligned_cols=13 Identities=15% Similarity=0.424 Sum_probs=8.7
Q ss_pred eecCCCCccchhH
Q 029136 22 CFPCPFCYLEIEA 34 (198)
Q Consensus 22 ~F~CPfC~e~fD~ 34 (198)
.-.||||+.-|-.
T Consensus 53 ~~~CpYCg~~f~l 65 (80)
T 2jvm_A 53 FVECGYCDRRYIH 65 (80)
T ss_dssp EEECSSSSCEEEE
T ss_pred eEECCCCCCEEEe
Confidence 4679999765443
No 277
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.49 E-value=16 Score=24.70 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=19.1
Q ss_pred eeecCCCCccchh-HHHHHhhhh
Q 029136 21 ACFPCPFCYLEIE-AHMICSHLQ 42 (198)
Q Consensus 21 ~~F~CPfC~e~fD-~~~Lc~H~~ 42 (198)
..|+||=|...|. ...|..|..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 5799999998887 788999986
No 278
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.85 E-value=22 Score=20.25 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=16.9
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT 34 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG
T ss_pred CeECCCCCcccCchHHHHHHHhH
Confidence 49999998865 45778888764
No 279
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=36.83 E-value=20 Score=19.78 Aligned_cols=22 Identities=27% Similarity=0.726 Sum_probs=16.0
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT
T ss_pred ceECCCCCcccCCHHHHHHHHHH
Confidence 48999998865 44667788653
No 280
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=36.60 E-value=11 Score=25.17 Aligned_cols=10 Identities=30% Similarity=1.069 Sum_probs=4.5
Q ss_pred cceeecCCCC
Q 029136 19 VKACFPCPFC 28 (198)
Q Consensus 19 ~r~~F~CPfC 28 (198)
+...+.||-|
T Consensus 32 lP~dw~CP~C 41 (52)
T 1yk4_A 32 LPDDWVCPLC 41 (52)
T ss_dssp SCTTCBCTTT
T ss_pred CCCCCcCCCC
Confidence 3344444444
No 281
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.56 E-value=14 Score=26.63 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=28.7
Q ss_pred eecCCCCccch-hHHHHHhhhhhhccCCcccccccccccc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
.|.|+.|+..| ....|..|....|.-| ++-.|.+|...
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~~ 88 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKRN 88 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCCS
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccCC
Confidence 59999999865 5677889966678654 67889886543
No 282
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=36.46 E-value=16 Score=19.52 Aligned_cols=19 Identities=26% Similarity=0.703 Sum_probs=11.5
Q ss_pred ecCCCCccchhHH-HHHhhh
Q 029136 23 FPCPFCYLEIEAH-MICSHL 41 (198)
Q Consensus 23 F~CPfC~e~fD~~-~Lc~H~ 41 (198)
|.|+.|+..|... .|..|.
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~ 22 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHI 22 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSST
T ss_pred CCCCCCCcccCCHHHHHHHH
Confidence 6777777755543 345554
No 283
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=35.84 E-value=13 Score=33.21 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=22.1
Q ss_pred eeecCCCCccchhHHHHHhhhhhhccCCccccccccccc-chhhhHh
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA-NLGKDAA 66 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~-~v~~d~v 66 (198)
+.-.||||+--|.. +-+.-+||||-- .+|.+.+
T Consensus 286 ~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~a~ 319 (325)
T 3mv2_A 286 PSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAPAS 319 (325)
T ss_dssp CEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCCCC
T ss_pred CCccCCCCCCeech-------------hhCCCCCCCCcCcccCCCcc
Confidence 45689999765432 246779999976 4665543
No 284
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.53 E-value=20 Score=20.02 Aligned_cols=24 Identities=17% Similarity=0.394 Sum_probs=17.6
Q ss_pred eecCCCCccch-hHHHHHhhhhhhcc
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQEEHC 46 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~eeH~ 46 (198)
.|.|+.|+..| ....|..|.. .|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 35 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL-IHT 35 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH-HHH
T ss_pred CEeCCCcChhhCCHHHHHHHHH-HcC
Confidence 49999998865 4567888875 453
No 285
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=35.27 E-value=10 Score=29.55 Aligned_cols=33 Identities=15% Similarity=0.396 Sum_probs=21.0
Q ss_pred CcceeecCCCCcc-chhHHHHHhhhhhhccCCcccccccccccchh
Q 029136 18 DVKACFPCPFCYL-EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 18 d~r~~F~CPfC~e-~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
.....|.||||+. .+-..+ ..--.|+-|-..+.
T Consensus 56 ~q~akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 56 EMNEDHACPNCGEDRVDRQG------------TGIWQCSYCDYKFT 89 (116)
T ss_dssp HHHSCEECSSSCCEEEEEEE------------TTEEEETTTCCEEE
T ss_pred HhccCCcCCCCCCceeEecC------------ceeEECCCCCCEEE
Confidence 3467899999986 443221 22345888888743
No 286
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=34.96 E-value=13 Score=33.07 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=23.1
Q ss_pred eeecCCCCccchhHHHHHhhhhhhccCCccccccccccc-chhhhHhh
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA-NLGKDAAE 67 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~-~v~~d~v~ 67 (198)
+.-.||||+-.+.. +-+.-+||||-- .+|.+-+|
T Consensus 277 ~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~G 311 (320)
T 3mkr_B 277 PVEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVIG 311 (320)
T ss_dssp CCEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCCC
T ss_pred CCccCCCCCCeech-------------hhCCCCCCCCcCcccCCcccC
Confidence 35589999765422 346789999986 57766544
No 287
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.76 E-value=23 Score=19.82 Aligned_cols=22 Identities=27% Similarity=0.606 Sum_probs=16.7
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|+..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRI 33 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTT
T ss_pred CEECCCCCCccCCHHHHHHHHHh
Confidence 599999988665 4667888753
No 288
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=34.31 E-value=10 Score=26.94 Aligned_cols=11 Identities=27% Similarity=0.923 Sum_probs=7.5
Q ss_pred eecCCCCccch
Q 029136 22 CFPCPFCYLEI 32 (198)
Q Consensus 22 ~F~CPfC~e~f 32 (198)
...||||+.-|
T Consensus 40 ~~~CpYCg~~f 50 (67)
T 2jrr_A 40 WVECPYCDCKY 50 (67)
T ss_dssp EEEETTTTEEE
T ss_pred eEECCCCCCEE
Confidence 46788887644
No 289
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=34.23 E-value=12 Score=27.27 Aligned_cols=40 Identities=20% Similarity=0.406 Sum_probs=22.8
Q ss_pred eeecCCCCccchhHHH--HHhhhhhhccCCcccc--cccccccc
Q 029136 21 ACFPCPFCYLEIEAHM--ICSHLQEEHCFEMKNA--VCPLCAAN 60 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~--Lc~H~~eeH~~e~k~v--VCPVCa~~ 60 (198)
..|.|+.|+--+|-.. --.=+..--+|+.-+. +||+|.+.
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred ceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 5799999977666421 0111112223444343 89999984
No 290
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.17 E-value=4.3 Score=27.44 Aligned_cols=41 Identities=20% Similarity=0.531 Sum_probs=22.8
Q ss_pred eeecCCCCcc-chhHHHH-Hhhh-hhhccCCcccccccccccchh
Q 029136 21 ACFPCPFCYL-EIEAHMI-CSHL-QEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 21 ~~F~CPfC~e-~fD~~~L-c~H~-~eeH~~e~k~vVCPVCa~~v~ 62 (198)
....|+.|.+ .-|.+.| |-|. -=..+.. +...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~ 57 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQ 57 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCC
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchh
Confidence 3578999966 4444332 3343 1111221 3468999998765
No 291
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=34.04 E-value=1.9 Score=32.39 Aligned_cols=42 Identities=19% Similarity=0.538 Sum_probs=24.3
Q ss_pred cceeecCCCCccchhH-HHH-Hhh-----hhhhccCCcccccccccccchh
Q 029136 19 VKACFPCPFCYLEIEA-HMI-CSH-----LQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 19 ~r~~F~CPfC~e~fD~-~~L-c~H-----~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
+..++.||-|.+.|.. +.| |-| |-...- .+...||+|...+.
T Consensus 50 ~~~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 50 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKDIK 98 (138)
T ss_dssp HHHHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHT--TTCSBCTTTCCBCC
T ss_pred ccccCCCcccCcccCCceECCCCCCccHHHHHHHH--HcCCcCCCCCCcCC
Confidence 4456889999774432 222 444 333322 23467999988754
No 292
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=33.95 E-value=24 Score=19.53 Aligned_cols=22 Identities=14% Similarity=0.309 Sum_probs=16.7
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHhhh
Confidence 49999998865 55678888653
No 293
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=33.46 E-value=4.3 Score=27.48 Aligned_cols=40 Identities=18% Similarity=0.404 Sum_probs=24.7
Q ss_pred cCcceeecCCCCccchh-HHH-------HHhhhhhhccCCcccccccccccchh
Q 029136 17 DDVKACFPCPFCYLEIE-AHM-------ICSHLQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD-~~~-------Lc~H~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
+++...+.||-|.+.+. ... +|..|.... ..||+|...+.
T Consensus 19 ~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~------~~CP~Cr~~i~ 66 (74)
T 4ic3_A 19 RRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV------DKCPMCYTVIT 66 (74)
T ss_dssp HHHHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC------SBCTTTCCBCS
T ss_pred hcCccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC------ccCCCcCcCcc
Confidence 34566789999976433 322 233333322 78999998765
No 294
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=33.35 E-value=13 Score=25.09 Aligned_cols=7 Identities=57% Similarity=1.455 Sum_probs=3.7
Q ss_pred ccccccc
Q 029136 53 VCPLCAA 59 (198)
Q Consensus 53 VCPVCa~ 59 (198)
+||+|.+
T Consensus 38 ~CP~Cga 44 (55)
T 2v3b_B 38 VCPDCGV 44 (55)
T ss_dssp CCTTTCC
T ss_pred cCCCCCC
Confidence 4555554
No 295
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=32.78 E-value=13 Score=29.90 Aligned_cols=28 Identities=36% Similarity=0.644 Sum_probs=18.6
Q ss_pred eeecCCCCccchhHHHHHhhhhhhccCCcccccccccccc
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
..-+||-|..++- .-+....|||-|+--
T Consensus 26 ~lP~CP~C~seyt------------YeDg~l~vCPeC~hE 53 (138)
T 2akl_A 26 TLPPCPQCNSEYT------------YEDGALLVCPECAHE 53 (138)
T ss_dssp CSCCCTTTCCCCC------------EECSSSEEETTTTEE
T ss_pred cCCCCCCCCCcce------------EecCCeEECCccccc
Confidence 3468999965543 124456899999863
No 296
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=32.70 E-value=11 Score=27.31 Aligned_cols=10 Identities=40% Similarity=1.006 Sum_probs=7.3
Q ss_pred cCCCCccchh
Q 029136 24 PCPFCYLEIE 33 (198)
Q Consensus 24 ~CPfC~e~fD 33 (198)
+||.|+..++
T Consensus 49 ~CPvCgs~l~ 58 (112)
T 1l8d_A 49 KCPVCGRELT 58 (112)
T ss_dssp ECTTTCCEEC
T ss_pred CCCCCCCcCC
Confidence 6888877665
No 297
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=32.29 E-value=15 Score=25.92 Aligned_cols=40 Identities=18% Similarity=0.367 Sum_probs=20.6
Q ss_pred eeecCCCCccchhHHH--HHhhhhhhccCCcccc--cccccccc
Q 029136 21 ACFPCPFCYLEIEAHM--ICSHLQEEHCFEMKNA--VCPLCAAN 60 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~--Lc~H~~eeH~~e~k~v--VCPVCa~~ 60 (198)
..|.|+.|+--+|-.. --.-+..--+++.-+. +||+|.+.
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCC
Confidence 3688999976555321 0011111123333333 89999884
No 298
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=32.00 E-value=4.8 Score=31.53 Aligned_cols=33 Identities=12% Similarity=-0.032 Sum_probs=19.2
Q ss_pred chhhHHhhhHHHHHHHhcccccccchhhhhhhhee
Q 029136 159 SSEYKLLWSQLLFKKLANKISVSSTMHFKIDVLLV 193 (198)
Q Consensus 159 ~~~~k~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 193 (198)
+..++....+.. +++.+.-|..|=.|++|==.+
T Consensus 152 s~~~~~~v~~~~--~~a~~~Gv~GvPtfvv~g~~~ 184 (202)
T 3fz5_A 152 DPALKETVRKIG--EDAVARGIFGSPFFLVDDEPF 184 (202)
T ss_dssp CHHHHHHHHHHH--HHHHHTTCCSSSEEEETTEEE
T ss_pred CHHHHHHHHHHH--HHHHHCCCCcCCEEEECCEEE
Confidence 455666655543 344556777777777664333
No 299
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=31.62 E-value=26 Score=21.02 Aligned_cols=22 Identities=32% Similarity=0.670 Sum_probs=16.4
Q ss_pred eecCCCCccchh-HHHHHhhhhh
Q 029136 22 CFPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
.|.|+.|+..|. ...|..|+..
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 499999988654 5667788753
No 300
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=31.22 E-value=37 Score=22.80 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=11.3
Q ss_pred ecCCCCccchh-HHHHHhhhhh
Q 029136 23 FPCPFCYLEIE-AHMICSHLQE 43 (198)
Q Consensus 23 F~CPfC~e~fD-~~~Lc~H~~e 43 (198)
|.|+.|++.|. ...|..|...
T Consensus 14 y~C~~CgK~F~~~s~L~~H~r~ 35 (66)
T 2epp_A 14 LPCGLCGKVFTDANRLRQHEAQ 35 (66)
T ss_dssp CCCTTTCCCCSCHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHhhhhh
Confidence 66666665443 3445555543
No 301
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=31.07 E-value=13 Score=26.11 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=21.8
Q ss_pred ccCcceeecCCCCccchhHHHHHhhhhhhccCCcccccccccccc
Q 029136 16 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
|..+.....||.|.-.+.... +....+||-|...
T Consensus 2 d~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2hf1_A 2 DAKFLEILVCPLCKGPLVFDK-----------SKDELICKGDRLA 35 (68)
T ss_dssp CCCCEEECBCTTTCCBCEEET-----------TTTEEEETTTTEE
T ss_pred ChHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 456778899999965443221 2355789988653
No 302
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=31.00 E-value=5.1 Score=31.07 Aligned_cols=33 Identities=9% Similarity=-0.054 Sum_probs=18.0
Q ss_pred hhHHhhhHHHHHHHhcccccccchhhhhhhheeee
Q 029136 161 EYKLLWSQLLFKKLANKISVSSTMHFKIDVLLVIG 195 (198)
Q Consensus 161 ~~k~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (198)
.++....+. .+++.+.-|.+|-.|+++=-++.|
T Consensus 148 ~~~~~v~~~--~~~a~~~Gv~G~Ptfvi~g~~~~G 180 (203)
T 2imf_A 148 AATERYDEQ--THAAIERKVFGVPTMFLGDEMWWG 180 (203)
T ss_dssp HHHHHHHHH--HHHHHHTTCCSSSEEEETTEEEES
T ss_pred HHHHHHHHH--HHHHHHCCCCcCCEEEECCEEEEC
Confidence 444444332 234566777877777766433333
No 303
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=30.64 E-value=21 Score=21.56 Aligned_cols=19 Identities=21% Similarity=0.604 Sum_probs=12.2
Q ss_pred cccccccccc-hhhhHhhhH
Q 029136 51 NAVCPLCAAN-LGKDAAEHF 69 (198)
Q Consensus 51 ~vVCPVCa~~-v~~d~v~Hi 69 (198)
.+-||||-.+ +...+-.|+
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 3679999875 544444444
No 304
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=30.36 E-value=11 Score=28.69 Aligned_cols=37 Identities=30% Similarity=0.631 Sum_probs=0.0
Q ss_pred cCCCCccchhHH--------------------HHHhhhhhhccCCc---ccccccccccc
Q 029136 24 PCPFCYLEIEAH--------------------MICSHLQEEHCFEM---KNAVCPLCAAN 60 (198)
Q Consensus 24 ~CPfC~e~fD~~--------------------~Lc~H~~eeH~~e~---k~vVCPVCa~~ 60 (198)
.|+-|-++|+.. .-|.|.--.|+.+. .+.+||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 688887776542 14778877777765 45789999765
No 305
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.31 E-value=3.1 Score=28.08 Aligned_cols=46 Identities=22% Similarity=0.457 Sum_probs=25.5
Q ss_pred cCcceeecCCCCccchhHHHH--Hhhh-hhhccCCcccccccccccchhh
Q 029136 17 DDVKACFPCPFCYLEIEAHMI--CSHL-QEEHCFEMKNAVCPLCAANLGK 63 (198)
Q Consensus 17 dd~r~~F~CPfC~e~fD~~~L--c~H~-~eeH~~e~k~vVCPVCa~~v~~ 63 (198)
++++..+.||-|.+.+....+ |-|. -=..+. .+...||+|...+..
T Consensus 20 ~~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~-~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 20 RRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA-EAVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHH-HHCSBCTTTCCBCCC
T ss_pred HcCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHh-hCCCCCccCCceecC
Confidence 445678899999764433221 3332 111111 133689999887653
No 306
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=30.25 E-value=13 Score=26.11 Aligned_cols=34 Identities=12% Similarity=0.182 Sum_probs=21.4
Q ss_pred ccCcceeecCCCCccchhHHHHHhhhhhhccCCcccccccccccc
Q 029136 16 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
|..+.....||.|.-.+.... +....+||-|...
T Consensus 2 d~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2jr6_A 2 EKKFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKLA 35 (68)
T ss_dssp CCSSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTEE
T ss_pred ChHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 445677889999965443221 2355789988653
No 307
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=30.19 E-value=6.2 Score=29.12 Aligned_cols=10 Identities=40% Similarity=0.982 Sum_probs=8.0
Q ss_pred eeecCCCCcc
Q 029136 21 ACFPCPFCYL 30 (198)
Q Consensus 21 ~~F~CPfC~e 30 (198)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 4799999954
No 308
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=30.17 E-value=11 Score=26.87 Aligned_cols=36 Identities=19% Similarity=0.486 Sum_probs=23.1
Q ss_pred eecCCCCccchhHHHHHhhhhhhccCCcccccccccccchh
Q 029136 22 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 62 (198)
Q Consensus 22 ~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v~ 62 (198)
...||.|...++...+.. -..+.....||||-....
T Consensus 48 ~~~CP~Cr~~~~~~~l~~-----l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 48 ANTCPTCRKKINHKRYHP-----IYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp CSBCTTTCCBCTTTCEEE-----CBCSSSSCBCTTTCCBHH
T ss_pred CCCCCCCCCcCccccccc-----cccCCCCCCCCCCCCccc
Confidence 358999987776543322 123455678999987654
No 309
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=30.11 E-value=12 Score=28.91 Aligned_cols=18 Identities=28% Similarity=0.571 Sum_probs=13.9
Q ss_pred CcceeecCCCCccchhHH
Q 029136 18 DVKACFPCPFCYLEIEAH 35 (198)
Q Consensus 18 d~r~~F~CPfC~e~fD~~ 35 (198)
+....+.|+-|+..+...
T Consensus 66 ~~p~~~~C~~CG~~~~~~ 83 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLK 83 (139)
T ss_dssp EECCEEEETTTCCEEEGG
T ss_pred ecCCcEECCCCCCEEecc
Confidence 456789999998876654
No 310
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=30.06 E-value=29 Score=21.11 Aligned_cols=10 Identities=40% Similarity=0.966 Sum_probs=7.8
Q ss_pred ccccccccch
Q 029136 52 AVCPLCAANL 61 (198)
Q Consensus 52 vVCPVCa~~v 61 (198)
..||+|...+
T Consensus 44 ~~CP~Cr~~~ 53 (55)
T 2ecm_A 44 YRCPLCSGPS 53 (55)
T ss_dssp CCCTTSCCSS
T ss_pred CcCCCCCCcC
Confidence 6799998764
No 311
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=29.97 E-value=5.5 Score=31.58 Aligned_cols=30 Identities=10% Similarity=-0.152 Sum_probs=19.9
Q ss_pred CchhhHHhhhHHHHHHHhcccccccchhhhhh
Q 029136 158 PSSEYKLLWSQLLFKKLANKISVSSTMHFKID 189 (198)
Q Consensus 158 ~~~~~k~~~~~~l~~~~~~~~~~~~~~~~~~~ 189 (198)
.+..++....+.. +++.+.-|.+|=.|+++
T Consensus 160 ~s~~~~~~v~~~~--~~a~~~gv~G~Ptfvv~ 189 (226)
T 1r4w_A 160 STELVKSKLRETT--GAACKYGAFGLPTTVAH 189 (226)
T ss_dssp TSHHHHHHHHHHH--HHHHHTTCCSSCEEEEE
T ss_pred CCHHHHHHHHHHH--HHHHHCCCCCCCEEEEe
Confidence 3456666665543 44566788888888877
No 312
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=29.94 E-value=6.6 Score=25.33 Aligned_cols=40 Identities=28% Similarity=0.639 Sum_probs=19.9
Q ss_pred ecCCCCccchhHH---HHHhhhhhhccCC---cccccccccccchh
Q 029136 23 FPCPFCYLEIEAH---MICSHLQEEHCFE---MKNAVCPLCAANLG 62 (198)
Q Consensus 23 F~CPfC~e~fD~~---~Lc~H~~eeH~~e---~k~vVCPVCa~~v~ 62 (198)
..||-|.+.+... .-|-|.-=..+.. .++..||+|...+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 5688886655321 1233321111111 12357999987664
No 313
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=29.74 E-value=12 Score=26.28 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=21.3
Q ss_pred ccCcceeecCCCCccchhHHHHHhhhhhhccCCcccccccccccc
Q 029136 16 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
|..+.....||.|.-.+.... +....+||-|...
T Consensus 2 d~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (70)
T 2js4_A 2 ESRLLDILVCPVCKGRLEFQR-----------AQAELVCNADRLA 35 (70)
T ss_dssp CCCCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTEE
T ss_pred ChHHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCce
Confidence 445677889999965443321 1345789988543
No 314
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=29.20 E-value=16 Score=26.99 Aligned_cols=7 Identities=57% Similarity=1.402 Sum_probs=4.8
Q ss_pred ccccccc
Q 029136 53 VCPLCAA 59 (198)
Q Consensus 53 VCPVCa~ 59 (198)
+||+|.+
T Consensus 70 ~CPvCga 76 (87)
T 1s24_A 70 CCPDCGA 76 (87)
T ss_dssp CCSSSCC
T ss_pred CCCCCCC
Confidence 6777765
No 315
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=28.95 E-value=6.2 Score=32.17 Aligned_cols=13 Identities=31% Similarity=1.160 Sum_probs=11.1
Q ss_pred CcceeecCCCCcc
Q 029136 18 DVKACFPCPFCYL 30 (198)
Q Consensus 18 d~r~~F~CPfC~e 30 (198)
|+..+|.|||||-
T Consensus 6 ~~~~D~~cPwcyi 18 (239)
T 3gl5_A 6 EIWSDIACPWCYV 18 (239)
T ss_dssp EEEECSSCHHHHH
T ss_pred EEEEeCcCHhHHH
Confidence 5678899999986
No 316
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=27.75 E-value=6.5 Score=31.90 Aligned_cols=29 Identities=7% Similarity=-0.118 Sum_probs=17.7
Q ss_pred CchhhHHhhhHHHHHHHhcccccccchhhhh
Q 029136 158 PSSEYKLLWSQLLFKKLANKISVSSTMHFKI 188 (198)
Q Consensus 158 ~~~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 188 (198)
.+..++....+.. +++.+.-|..+=.|++
T Consensus 160 ~s~~~~~~l~~~~--~~a~~~Gv~GvPtfvv 188 (234)
T 3rpp_A 160 ATPKVKNQLKETT--EAACRYGAFGLPITVA 188 (234)
T ss_dssp TSHHHHHHHHHHH--HHHHHTTCSSSCEEEE
T ss_pred cCHHHHHHHHHHH--HHHHHcCCCCCCEEEE
Confidence 4566776665544 3344556777777776
No 317
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=26.09 E-value=7 Score=30.06 Aligned_cols=12 Identities=25% Similarity=0.459 Sum_probs=9.4
Q ss_pred cceeecCCCCcc
Q 029136 19 VKACFPCPFCYL 30 (198)
Q Consensus 19 ~r~~F~CPfC~e 30 (198)
+-..|.||||+.
T Consensus 12 ~f~D~~CP~C~~ 23 (216)
T 2in3_A 12 YIADPMCSWCWG 23 (216)
T ss_dssp EEECTTCHHHHH
T ss_pred EEECCCCchhhc
Confidence 456799999973
No 318
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=26.07 E-value=5.7 Score=29.39 Aligned_cols=23 Identities=35% Similarity=0.748 Sum_probs=13.5
Q ss_pred HhhhhhhccCCc---ccccccccccc
Q 029136 38 CSHLQEEHCFEM---KNAVCPLCAAN 60 (198)
Q Consensus 38 c~H~~eeH~~e~---k~vVCPVCa~~ 60 (198)
|.|.--.|+.+. .+..||+|...
T Consensus 73 C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 73 CNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp TSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred cCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 455444444433 35689999775
No 319
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=25.94 E-value=14 Score=25.88 Aligned_cols=34 Identities=12% Similarity=0.306 Sum_probs=21.1
Q ss_pred ccCcceeecCCCCccchhHHHHHhhhhhhccCCcccccccccccc
Q 029136 16 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 16 ddd~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
|..+.....||.|.-.+.... +....+||-|...
T Consensus 2 d~~LLeiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (69)
T 2pk7_A 2 DTKLLDILACPICKGPLKLSA-----------DKTELISKGAGLA 35 (69)
T ss_dssp -CCGGGTCCCTTTCCCCEECT-----------TSSEEEETTTTEE
T ss_pred ChHHHhheeCCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 445677889999965443211 1345789988653
No 320
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.85 E-value=22 Score=20.05 Aligned_cols=22 Identities=14% Similarity=0.318 Sum_probs=16.5
Q ss_pred eecCCCCccch-hHHHHHhhhhh
Q 029136 22 CFPCPFCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 22 ~F~CPfC~e~f-D~~~Lc~H~~e 43 (198)
.|.|+.|+..| ....|..|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH
T ss_pred CeECcccCcccCCHHHHHHHHHH
Confidence 49999998855 45677888754
No 321
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=24.52 E-value=25 Score=23.73 Aligned_cols=12 Identities=17% Similarity=0.581 Sum_probs=6.2
Q ss_pred eecCCCCccchh
Q 029136 22 CFPCPFCYLEIE 33 (198)
Q Consensus 22 ~F~CPfC~e~fD 33 (198)
.|.|+-|+--+|
T Consensus 3 ~y~C~vCGyvYd 14 (54)
T 4rxn_A 3 KYTCTVCGYIYD 14 (54)
T ss_dssp CEEETTTCCEEC
T ss_pred ceECCCCCeEEC
Confidence 355666654443
No 322
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=24.32 E-value=33 Score=25.76 Aligned_cols=18 Identities=11% Similarity=-0.151 Sum_probs=11.4
Q ss_pred chhhHHhhhHHHHHHHhc
Q 029136 159 SSEYKLLWSQLLFKKLAN 176 (198)
Q Consensus 159 ~~~~k~~~~~~l~~~~~~ 176 (198)
...|+..+++.|-+..++
T Consensus 168 ~~~l~~~i~~~l~~~~~~ 185 (195)
T 2znm_A 168 FDGGVHTIKELVAKVREE 185 (195)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 346777777777655444
No 323
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=24.28 E-value=8 Score=30.07 Aligned_cols=23 Identities=9% Similarity=0.132 Sum_probs=14.8
Q ss_pred CcceeecCCCCcc-chhHHHHHhh
Q 029136 18 DVKACFPCPFCYL-EIEAHMICSH 40 (198)
Q Consensus 18 d~r~~F~CPfC~e-~fD~~~Lc~H 40 (198)
++...|.||||+. .--+..|...
T Consensus 6 ~~~~D~~CP~cy~~~~~l~~l~~~ 29 (208)
T 3kzq_A 6 YYVHDPMCSWCWGYKPTIEKLKQQ 29 (208)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCchhhhhhHHHHHHHHh
Confidence 3557799999975 3344455544
No 324
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.25 E-value=5.4 Score=27.43 Aligned_cols=11 Identities=45% Similarity=1.126 Sum_probs=7.9
Q ss_pred cccccccccch
Q 029136 51 NAVCPLCAANL 61 (198)
Q Consensus 51 ~vVCPVCa~~v 61 (198)
+..||+|...+
T Consensus 64 ~~~CP~CR~~~ 74 (81)
T 2ecl_A 64 NNRCPLCQQDW 74 (81)
T ss_dssp CCBCTTTCCBC
T ss_pred CCCCCCcCCCc
Confidence 35899988764
No 325
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=23.95 E-value=19 Score=25.16 Aligned_cols=34 Identities=12% Similarity=0.040 Sum_probs=21.2
Q ss_pred cccCcceeecCCCCccchhHHHHHhhhhhhccCCccccccccccc
Q 029136 15 IDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 59 (198)
Q Consensus 15 ~ddd~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~ 59 (198)
.|..+.....||.|.-.+.... +....+||-|..
T Consensus 3 md~~LLeiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 3 LDPQLLEVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp SCGGGTCCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred CCHHHHHHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 3556777889999954333211 234578888854
No 326
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=23.25 E-value=9.1 Score=28.96 Aligned_cols=12 Identities=33% Similarity=0.941 Sum_probs=9.4
Q ss_pred cceeecCCCCcc
Q 029136 19 VKACFPCPFCYL 30 (198)
Q Consensus 19 ~r~~F~CPfC~e 30 (198)
.-..|.||||+.
T Consensus 17 ~f~D~~Cp~C~~ 28 (186)
T 3bci_A 17 VYGDYKCPYCKE 28 (186)
T ss_dssp EEECTTCHHHHH
T ss_pred EEECCCChhHHH
Confidence 345799999976
No 327
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.24 E-value=75 Score=22.14 Aligned_cols=32 Identities=25% Similarity=0.503 Sum_probs=19.9
Q ss_pred CccchhHHHHHhhhhhhccCCcccccccc--cccc
Q 029136 28 CYLEIEAHMICSHLQEEHCFEMKNAVCPL--CAAN 60 (198)
Q Consensus 28 C~e~fD~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~ 60 (198)
|+-.|+...+..++...+. ..+...||+ |...
T Consensus 26 cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 26 CGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCC
T ss_pred CCCeecHHHHHHHHHHccC-cCCCCCCCcCcCccc
Confidence 4445666777777765431 123568999 9854
No 328
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=23.06 E-value=11 Score=23.49 Aligned_cols=9 Identities=44% Similarity=1.003 Sum_probs=7.5
Q ss_pred ccccccccc
Q 029136 52 AVCPLCAAN 60 (198)
Q Consensus 52 vVCPVCa~~ 60 (198)
-+||+|.+.
T Consensus 17 ~~CP~CtA~ 25 (32)
T 2bai_A 17 EECPKCSAL 25 (32)
T ss_dssp GGHHHHHCS
T ss_pred cccccccee
Confidence 689999875
No 329
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=23.05 E-value=52 Score=16.80 Aligned_cols=21 Identities=19% Similarity=0.532 Sum_probs=13.9
Q ss_pred ecCC--CCccch-hHHHHHhhhhh
Q 029136 23 FPCP--FCYLEI-EAHMICSHLQE 43 (198)
Q Consensus 23 F~CP--fC~e~f-D~~~Lc~H~~e 43 (198)
|.|+ .|+..| ....|..|...
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 7787 788755 44567777643
No 330
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=22.05 E-value=32 Score=34.29 Aligned_cols=37 Identities=19% Similarity=0.448 Sum_probs=22.9
Q ss_pred cceeecCCCCccchhHHHHHhhhhhhccCCcccccccccccc
Q 029136 19 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 60 (198)
Q Consensus 19 ~r~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 60 (198)
.-..|.||.|+..|...+= ..-.|....+.||.|.-.
T Consensus 246 ~s~~~~c~~~~~~~~~~~~-----~~fsfn~p~g~C~~C~G~ 282 (916)
T 3pih_A 246 FSENLMCPVCGIGFPEITP-----KLFSFNSPYGACPNCHGL 282 (916)
T ss_dssp EESSCBCTTTCCCCCCCSG-----GGGCTTSTTTBCTTTTTS
T ss_pred ecccccCcccCCccCCCCH-----hhcCCCCCCCcCCeeecc
Confidence 3467999999865543211 112344456999999753
No 331
>1rpq_W Peptide E131; receptor-peptide complex, membrane protein; HET: NAG BMA NDG CIT; 3.00A {Homo sapiens} PDB: 1kco_A
Probab=21.43 E-value=9.1 Score=22.57 Aligned_cols=6 Identities=83% Similarity=2.361 Sum_probs=2.7
Q ss_pred CC-CCcc
Q 029136 25 CP-FCYL 30 (198)
Q Consensus 25 CP-fC~e 30 (198)
|| ||+|
T Consensus 3 cphfcye 9 (26)
T 1rpq_W 3 CPHFCYE 9 (26)
T ss_dssp CCTHHHH
T ss_pred CCeeeee
Confidence 44 4544
No 332
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=21.32 E-value=55 Score=19.44 Aligned_cols=20 Identities=25% Similarity=0.532 Sum_probs=8.5
Q ss_pred eecCCCCcc-chhHHHHHhhh
Q 029136 22 CFPCPFCYL-EIEAHMICSHL 41 (198)
Q Consensus 22 ~F~CPfC~e-~fD~~~Lc~H~ 41 (198)
.|.||-|.. -=|...+-.|.
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~ 23 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHV 23 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHH
Confidence 345555522 33444444443
No 333
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=21.14 E-value=10 Score=29.96 Aligned_cols=10 Identities=30% Similarity=0.976 Sum_probs=8.2
Q ss_pred eeecCCCCcc
Q 029136 21 ACFPCPFCYL 30 (198)
Q Consensus 21 ~~F~CPfC~e 30 (198)
..|.||||..
T Consensus 37 ~D~~CP~C~~ 46 (202)
T 3gha_A 37 GDYKCPSCKV 46 (202)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCChhHHH
Confidence 4799999964
No 334
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=20.86 E-value=40 Score=25.32 Aligned_cols=41 Identities=22% Similarity=0.401 Sum_probs=27.8
Q ss_pred eeecCCCCcc--chhH---HHHHhhhhhhccCCccc------ccccccccch
Q 029136 21 ACFPCPFCYL--EIEA---HMICSHLQEEHCFEMKN------AVCPLCAANL 61 (198)
Q Consensus 21 ~~F~CPfC~e--~fD~---~~Lc~H~~eeH~~e~k~------vVCPVCa~~v 61 (198)
.-|.|--|++ +++. ..+...+...+-|+... |+||-|..+-
T Consensus 86 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~~ 137 (139)
T 3mwm_A 86 HHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGAS 137 (139)
T ss_dssp EEEEETTTCCEEEECCHHHHHHHHHHHHHTTCCSCCCCCEEEECCHHHHCC-
T ss_pred cEEEECCCCCEeecccccHHHHHHHHHHhCCCEEEeeEEEEEEEChHHhCcc
Confidence 4588999986 6653 34556666677665543 7899998754
No 335
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=20.69 E-value=58 Score=15.94 Aligned_cols=20 Identities=15% Similarity=0.411 Sum_probs=13.4
Q ss_pred ecCC--CCccch-hHHHHHhhhh
Q 029136 23 FPCP--FCYLEI-EAHMICSHLQ 42 (198)
Q Consensus 23 F~CP--fC~e~f-D~~~Lc~H~~ 42 (198)
|.|+ .|+..| ....|..|..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCcCCcCcCccCCHHHHHHHHH
Confidence 6788 887755 4456677754
No 336
>3i1m_R 30S ribosomal protein S18; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_R* 1vs5_R 3i1o_R 3i1q_R 3i1s_R 3i1z_R 3i21_R 3izv_V* 3izw_V* 3kc4_R 3or9_R 3ora_R 3sfs_R* 3uoq_R* 4gaq_R* 4gas_R* 2qal_R* 1p6g_R 1p87_R 2aw7_R ...
Probab=20.65 E-value=23 Score=25.41 Aligned_cols=31 Identities=6% Similarity=0.292 Sum_probs=7.0
Q ss_pred CCcccccccccccchh------hhHhhhHhhhhhhhh
Q 029136 47 FEMKNAVCPLCAANLG------KDAAEHFMVQHASSL 77 (198)
Q Consensus 47 ~e~k~vVCPVCa~~v~------~d~v~Hit~qH~~~~ 77 (198)
+..+.-+||+|+..+. .+++.++....|.++
T Consensus 4 ~~~r~k~C~fc~~~~~~iDYknv~lL~~Fis~~GkIl 40 (75)
T 3i1m_R 4 YFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIV 40 (75)
T ss_dssp ----------------CCSTTCHHHHGGGBCTTCCBC
T ss_pred cCCCCCCCCcccCCCCcCCcCCHHHHHHHcCcCCCCc
Confidence 3345567888877653 245555444444444
No 337
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=20.59 E-value=35 Score=25.94 Aligned_cols=26 Identities=23% Similarity=0.509 Sum_probs=20.1
Q ss_pred CcceeecCCCCccchhHHHHHhhhhh
Q 029136 18 DVKACFPCPFCYLEIEAHMICSHLQE 43 (198)
Q Consensus 18 d~r~~F~CPfC~e~fD~~~Lc~H~~e 43 (198)
+-..+|.||-|+..+--.-..-|++.
T Consensus 66 ~~s~~~~C~nC~R~vaa~RFApHLeK 91 (99)
T 3mhs_C 66 ESSQYIHCENCGRDVSANRLAAHLQR 91 (99)
T ss_dssp TTSCEEECTTTCCEEEGGGHHHHHHH
T ss_pred cCCCeEECCCCCCCchhhhhHHHHHH
Confidence 34568999999888888777777753
No 338
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=20.38 E-value=39 Score=23.55 Aligned_cols=29 Identities=14% Similarity=0.328 Sum_probs=21.4
Q ss_pred eeecCCCCccchhHHHHHhhhhhhccCCcccccccccccch
Q 029136 21 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 61 (198)
Q Consensus 21 ~~F~CPfC~e~fD~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 61 (198)
..|.|.-|+.++++. ....+-||-|..++
T Consensus 20 v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 20 MIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred eEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 579999998877743 12457899997664
No 339
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=20.32 E-value=13 Score=29.20 Aligned_cols=20 Identities=25% Similarity=0.335 Sum_probs=12.7
Q ss_pred HHhcccccccchhhhhhhhe
Q 029136 173 KLANKISVSSTMHFKIDVLL 192 (198)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~ 192 (198)
+++.+.-|++|=.|+++=-.
T Consensus 145 ~~a~~~GV~gtPtf~ing~~ 164 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMINGLV 164 (182)
T ss_dssp HHHHHHTCCSSSEEEETTEE
T ss_pred HHHHHCCCCccCEEEECCEE
Confidence 45566677777777766433
Done!