Query 029139
Match_columns 198
No_of_seqs 206 out of 556
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 13:03:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3by4_A OTU1, ubiquitin thioest 100.0 1.9E-31 6.5E-36 224.8 10.7 119 65-198 46-164 (212)
2 3pfy_A OTU domain-containing p 99.9 5.4E-23 1.8E-27 170.3 6.9 94 65-164 86-181 (185)
3 3phx_A RNA-directed RNA polyme 99.9 2.1E-22 7.1E-27 166.6 8.5 95 65-168 64-163 (185)
4 3phu_A RNA-directed RNA polyme 99.9 2.5E-22 8.4E-27 170.3 7.9 98 65-171 64-166 (219)
5 3by4_A OTU1, ubiquitin thioest 99.7 7.3E-19 2.5E-23 147.9 4.1 75 1-84 126-207 (212)
6 1tff_A Ubiquitin thiolesterase 99.7 6.1E-17 2.1E-21 138.0 8.2 92 66-165 133-231 (234)
7 2zfy_A Ubiquitin thioesterase 99.7 1.7E-16 5.8E-21 135.1 8.8 90 66-163 136-233 (234)
8 4dhi_B Ubiquitin thioesterase 99.6 1.1E-15 3.7E-20 133.8 8.7 96 66-166 171-275 (284)
9 4ddg_A Ubiquitin-conjugating e 99.3 1.7E-12 5.9E-17 117.8 8.2 90 66-163 301-398 (399)
10 3phu_A RNA-directed RNA polyme 84.5 0.39 1.3E-05 40.1 1.9 19 1-19 145-164 (219)
11 3dkb_A Tumor necrosis factor, 74.3 5.4 0.00018 36.0 6.0 56 108-165 213-283 (390)
12 3zrh_A Ubiquitin thioesterase 64.0 9.3 0.00032 35.0 5.3 56 108-165 280-349 (454)
13 1znf_A 31ST zinc finger from X 41.1 14 0.00047 18.1 1.6 22 58-79 3-24 (27)
14 1ard_A Yeast transcription fac 34.9 20 0.00069 17.6 1.7 24 57-80 3-26 (29)
15 2e9h_A EIF-5, eukaryotic trans 34.5 12 0.0004 29.7 0.8 31 52-82 122-154 (157)
16 1rik_A E6APC1 peptide; E6-bind 34.0 22 0.00074 17.6 1.7 24 57-80 3-26 (29)
17 2g2k_A EIF-5, eukaryotic trans 33.8 13 0.00045 29.8 1.1 32 52-83 115-148 (170)
18 2kvf_A Zinc finger and BTB dom 32.9 24 0.0008 17.4 1.7 21 57-77 4-24 (28)
19 2m0d_A Zinc finger and BTB dom 31.8 26 0.0009 17.2 1.8 24 57-80 4-27 (30)
20 2m0f_A Zinc finger and BTB dom 30.3 23 0.00078 17.3 1.4 23 57-79 3-25 (29)
21 4fuu_A Leucine aminopeptidase; 30.1 27 0.00093 29.3 2.5 41 6-47 100-146 (309)
22 2elt_A Zinc finger protein 406 29.0 30 0.001 18.1 1.8 25 56-80 9-33 (36)
23 2epv_A Zinc finger protein 268 28.0 50 0.0017 18.4 2.8 34 48-81 4-37 (44)
24 1p7a_A BF3, BKLF, kruppel-like 27.7 47 0.0016 17.5 2.5 28 52-79 7-34 (37)
25 2kvh_A Zinc finger and BTB dom 27.2 37 0.0013 16.5 1.9 19 57-75 4-22 (27)
26 2elr_A Zinc finger protein 406 26.9 32 0.0011 18.0 1.7 25 56-80 9-33 (36)
27 1srk_A Zinc finger protein ZFP 26.8 53 0.0018 17.0 2.6 26 56-81 7-32 (35)
28 2elq_A Zinc finger protein 406 26.6 38 0.0013 17.8 2.0 25 56-80 9-33 (36)
29 1klr_A Zinc finger Y-chromosom 26.5 30 0.001 16.9 1.4 23 57-79 3-25 (30)
30 2elv_A Zinc finger protein 406 26.5 35 0.0012 18.0 1.8 25 56-80 9-33 (36)
31 3hl5_A Baculoviral IAP repeat- 26.1 9.6 0.00033 27.4 -0.9 61 42-102 32-94 (95)
32 2els_A Zinc finger protein 406 26.1 33 0.0011 18.1 1.6 25 56-80 9-33 (36)
33 2ytj_A Zinc finger protein 484 25.9 55 0.0019 18.3 2.7 35 47-81 3-37 (46)
34 2em3_A Zinc finger protein 28 25.0 53 0.0018 18.3 2.5 35 48-82 4-38 (46)
35 2ep1_A Zinc finger protein 484 24.7 51 0.0018 18.4 2.4 35 47-81 3-37 (46)
36 2yrj_A Zinc finger protein 473 24.7 56 0.0019 18.2 2.6 34 48-81 4-37 (46)
37 2jn4_A Hypothetical protein FI 24.6 3.1 0.00011 30.0 -3.7 23 89-111 39-61 (87)
38 2m0e_A Zinc finger and BTB dom 24.6 29 0.001 16.8 1.1 20 58-77 4-23 (29)
39 1rim_A E6APC2 peptide; E6-bind 24.6 38 0.0013 17.8 1.7 24 58-81 4-27 (33)
40 2em5_A ZFP-95, zinc finger pro 24.5 54 0.0019 18.4 2.5 34 48-81 4-37 (46)
41 1njq_A Superman protein; zinc- 24.4 41 0.0014 18.2 1.8 26 57-82 7-32 (39)
42 2elx_A Zinc finger protein 406 24.4 59 0.002 16.6 2.5 26 56-81 7-32 (35)
43 2ep3_A Zinc finger protein 484 24.1 55 0.0019 18.3 2.5 35 47-81 3-37 (46)
44 2eme_A Zinc finger protein 473 24.0 65 0.0022 17.9 2.8 34 48-81 4-37 (46)
45 1lg4_A Doppel protein, prion-l 23.9 20 0.00068 27.1 0.5 12 4-15 63-74 (129)
46 2eoz_A Zinc finger protein 473 23.9 54 0.0019 18.4 2.4 34 48-81 4-37 (46)
47 2en7_A Zinc finger protein 268 23.8 44 0.0015 18.4 1.9 33 49-81 5-37 (44)
48 2eow_A Zinc finger protein 347 23.8 55 0.0019 18.2 2.4 33 49-81 5-37 (46)
49 2el4_A Zinc finger protein 268 23.2 55 0.0019 18.2 2.3 34 48-81 4-37 (46)
50 2emj_A Zinc finger protein 28 23.2 60 0.0021 18.2 2.5 35 47-81 3-37 (46)
51 2kvg_A Zinc finger and BTB dom 23.1 40 0.0014 16.6 1.5 17 57-73 4-20 (27)
52 2elo_A Zinc finger protein 406 23.0 42 0.0015 17.7 1.7 26 56-81 9-34 (37)
53 1wii_A Hypothetical UPF0222 pr 22.7 31 0.001 24.5 1.2 32 53-99 44-75 (85)
54 1i17_A Mouse doppel, prion-lik 22.7 18 0.00063 26.5 0.0 12 4-15 37-48 (107)
55 2eop_A Zinc finger protein 268 22.7 52 0.0018 18.3 2.1 35 47-81 3-37 (46)
56 2ema_A Zinc finger protein 347 22.2 72 0.0025 17.7 2.7 34 48-81 4-37 (46)
57 2yu5_A Zinc finger protein 473 22.1 65 0.0022 17.7 2.5 34 48-81 4-37 (44)
58 2eof_A Zinc finger protein 268 22.1 65 0.0022 17.6 2.5 32 50-81 6-37 (44)
59 2emm_A ZFP-95, zinc finger pro 21.9 67 0.0023 17.8 2.5 34 48-81 4-37 (46)
60 2em4_A Zinc finger protein 28 21.9 67 0.0023 18.0 2.5 33 49-81 5-37 (46)
61 2ytk_A Zinc finger protein 347 21.8 67 0.0023 17.9 2.5 34 48-81 4-37 (46)
62 2yts_A Zinc finger protein 484 21.8 61 0.0021 18.0 2.3 32 50-81 6-37 (46)
63 2ytf_A Zinc finger protein 268 21.4 76 0.0026 17.6 2.7 32 50-81 6-37 (46)
64 2emy_A Zinc finger protein 268 21.3 72 0.0025 17.7 2.6 34 48-81 4-37 (46)
65 2eoe_A Zinc finger protein 347 21.3 66 0.0022 17.9 2.4 33 50-82 6-38 (46)
66 2ytp_A Zinc finger protein 484 21.2 72 0.0025 17.8 2.6 33 49-81 5-37 (46)
67 2emi_A Zinc finger protein 484 21.2 83 0.0029 17.4 2.9 32 50-81 6-37 (46)
68 2eml_A Zinc finger protein 28 21.0 81 0.0028 17.5 2.8 32 50-81 6-37 (46)
69 2ep2_A Zinc finger protein 484 21.0 79 0.0027 17.6 2.7 33 50-82 6-38 (46)
70 2yto_A Zinc finger protein 484 20.9 75 0.0026 17.7 2.6 34 48-81 4-37 (46)
71 1paa_A Yeast transcription fac 20.8 34 0.0012 16.9 0.9 19 57-75 3-21 (30)
72 2eq4_A Zinc finger protein 224 20.7 68 0.0023 17.8 2.4 34 48-81 4-37 (46)
73 2em0_A Zinc finger protein 224 20.7 61 0.0021 18.1 2.2 35 47-81 3-37 (46)
74 2emg_A Zinc finger protein 484 20.5 62 0.0021 18.0 2.2 33 49-81 5-37 (46)
75 2eoq_A Zinc finger protein 224 20.2 72 0.0025 17.7 2.4 33 50-82 6-38 (46)
76 2em6_A Zinc finger protein 224 20.2 72 0.0025 17.8 2.4 32 50-81 6-37 (46)
77 2lvt_A Zinc finger and BTB dom 25.5 22 0.00075 17.7 0.0 14 57-70 3-16 (29)
No 1
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.97 E-value=1.9e-31 Score=224.79 Aligned_cols=119 Identities=23% Similarity=0.497 Sum_probs=107.6
Q ss_pred cchhhHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCCeeeeCCCcccccc
Q 029139 65 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTTRCDLYGQCSHFQEK 144 (198)
Q Consensus 65 ~l~lR~~vA~~I~~n~~~y~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~~~~~~ge~~~~~~~ 144 (198)
...+|+.+|++|++|++.|.|+|+++++++||+||+++..|||+|||+|||++|+++|.|++.+++++..||+ +.
T Consensus 46 ~~~lR~~vv~yi~~n~d~f~e~~~~~~~e~Y~~~m~~~~~WGg~iEL~Als~~~~~~I~V~~~~~~~~~~~~~-----~~ 120 (212)
T 3by4_A 46 VRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWILKMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNE-----DK 120 (212)
T ss_dssp SHHHHHHHHHHHHHCTTTTCHHHHTSCHHHHHHHTTSTTSCCCHHHHHHHHHHHTCEEEEEETTTTEEEEEST-----TT
T ss_pred HHHHHHHHHHHHHHCHHHHhhhhcCCCHHHHHHHhcCCCEEccHHHHHHHHHHHCCCEEEEECCCCCeEEeCC-----CC
Confidence 4589999999999999999988999999999999999999999999999999999999999998888999998 43
Q ss_pred cCCCeEEEEecCcccccccccccCCCCCCCCeeeeeCCCCCChhHHHHHHhhhC
Q 029139 145 KYSERVMLIYDELHYDAVAISAFEGAPVEFDQSSVPVRKDRTIGPAEELAFETC 198 (198)
Q Consensus 145 ~~~~~i~L~Y~G~HYdsl~~~~~~~~~~~~d~t~f~~~~~~~~~~~~~~a~~l~ 198 (198)
.+++|+|+|+|+|||||++ ++|+|+||++|++. +.++++|++||
T Consensus 121 -~~~~I~L~Y~g~HYdsl~~--------~~d~~~f~~~~~~~-~~~~~~a~~l~ 164 (212)
T 3by4_A 121 -FDNYILILFNGIHYDSLTM--------NEFKTVFNKNQPES-DDVLTAALQLA 164 (212)
T ss_dssp -CSEEEEEEECSSCEEEEEE--------TTTBCCEETTSTTH-HHHHHHHHHHH
T ss_pred -CCCeEEEEEcCCcceEEec--------CCCcccCCccccch-HHHHHHHHHHH
Confidence 4678999999999999996 78999999998555 56777777764
No 2
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=99.87 E-value=5.4e-23 Score=170.31 Aligned_cols=94 Identities=17% Similarity=0.336 Sum_probs=65.6
Q ss_pred cchhhHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCCeeee-CCCccccc
Q 029139 65 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTTRCDLY-GQCSHFQE 143 (198)
Q Consensus 65 ~l~lR~~vA~~I~~n~~~y~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~~~~~~-ge~~~~~~ 143 (198)
...+|+.++++|++|++.|.+ |+++++++||+||+++..|||+|||+|||++|+++|.|++..+.++..| |+ +
T Consensus 86 h~~LR~~vv~yi~~n~d~f~~-Fv~~~~e~Y~~~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~~~~~i~i~~g~-----~ 159 (185)
T 3pfy_A 86 HEVVRKHCMDYLMKNADYFSN-YVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGI-----H 159 (185)
T ss_dssp HHHHHHHHHHHHHHTHHHHTT-CC-----------------CCHHHHHHHHHHHTSCEEEESSCSSCSEEECTT-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHhhCCCccchHHHHHHHHHhhCCcEEEEECCCCCeEEecCc-----c
Confidence 357999999999999999988 8889999999999999999999999999999999999999876555545 54 3
Q ss_pred ccCCCeEEEEec-Ccccccccc
Q 029139 144 KKYSERVMLIYD-ELHYDAVAI 164 (198)
Q Consensus 144 ~~~~~~i~L~Y~-G~HYdsl~~ 164 (198)
....++|+|+|+ |+|||||+-
T Consensus 160 ~~~~~~I~L~Y~~~~HYnSv~~ 181 (185)
T 3pfy_A 160 QNEDEPIRVSYHRNIHYNSVVN 181 (185)
T ss_dssp CCTTSCEEEEEETTTEEEEEEC
T ss_pred CCCCCEEEEEECCCCCcccccC
Confidence 335678999995 799999974
No 3
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.87 E-value=2.1e-22 Score=166.58 Aligned_cols=95 Identities=21% Similarity=0.322 Sum_probs=82.2
Q ss_pred cchhhHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC----eeeeCCCcc
Q 029139 65 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTTR----CDLYGQCSH 140 (198)
Q Consensus 65 ~l~lR~~vA~~I~~n~~~y~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~~----~~~~ge~~~ 140 (198)
...+|+.+|+++++|++. +++++++++||+||+++..|||++||+|||++|+++|.|+++++.. +.+||+
T Consensus 64 ~~~LR~~~~~yi~~~~~~---~~~~~~~~~Y~~~m~~~~~WGg~iEL~Als~~~~v~I~V~~~d~~~~~~~i~~f~~--- 137 (185)
T 3phx_A 64 KRLTESAARKYYQEEPEA---RLVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGD--- 137 (185)
T ss_dssp HHHHHHHHHHHGGGCTTH---HHHCCCHHHHHHHHTSTTCCCBHHHHHHHHHHHCCCEEEEEC--CCBCCEEEEESS---
T ss_pred HHHHHHHHHHHHHhChHh---hhcCCCHHHHHHHhhCCCccCcHHHHHHHHHHHCCcEEEEEecCCCCceEEEEcCC---
Confidence 458999999999999999 4789999999999999999999999999999999999999876543 688998
Q ss_pred cccccCCCeEEEEecC-cccccccccccC
Q 029139 141 FQEKKYSERVMLIYDE-LHYDAVAISAFE 168 (198)
Q Consensus 141 ~~~~~~~~~i~L~Y~G-~HYdsl~~~~~~ 168 (198)
++ ..++|+|+|+| +|||||+..+..
T Consensus 138 --~~-~~~~I~L~Y~g~~HYdsl~~~~~~ 163 (185)
T 3phx_A 138 --GD-VFTAVNLLHSGQTHFDALRILPQF 163 (185)
T ss_dssp --CC-TTTSEEEEEETTTEEEEEEECGGG
T ss_pred --CC-CCCEEEEEECCCcCchhceECCCC
Confidence 32 25789999999 999999986543
No 4
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.86 E-value=2.5e-22 Score=170.27 Aligned_cols=98 Identities=20% Similarity=0.308 Sum_probs=85.1
Q ss_pred cchhhHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCC----CeeeeCCCcc
Q 029139 65 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTT----RCDLYGQCSH 140 (198)
Q Consensus 65 ~l~lR~~vA~~I~~n~~~y~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~----~~~~~ge~~~ 140 (198)
...+|+.+|++|++|++. +++++++++||+||+++..|||++||+|||++|+++|.|+++++. ++.+||+
T Consensus 64 h~~LR~~va~yi~~n~d~---~~~~~~feeY~~~m~~~g~WGG~iEL~AlS~~~~v~I~V~~~d~~g~~~~i~~fge--- 137 (219)
T 3phu_A 64 KRLTESAARKYYQEEPEA---RLVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGD--- 137 (219)
T ss_dssp HHHHHHHHHHHGGGCHHH---HHHCCCHHHHHHHHHSTTCCCCHHHHHHHHHHTTCCEEEEEESSSSBEEEEEEESS---
T ss_pred HHHHHHHHHHHHHhChhh---hhcCCCHHHHHHHhcCCCccCCHHHHHHHHHHhCCCEEEEEecCCCCceeEEEecC---
Confidence 458999999999999999 478999999999999999999999999999999999999987754 4788998
Q ss_pred cccccCCCeEEEEecC-cccccccccccCCCC
Q 029139 141 FQEKKYSERVMLIYDE-LHYDAVAISAFEGAP 171 (198)
Q Consensus 141 ~~~~~~~~~i~L~Y~G-~HYdsl~~~~~~~~~ 171 (198)
++ ..++|+|+|+| +|||||+..+....+
T Consensus 138 --~~-~~~~I~L~Y~g~~HYdSL~~~~d~~~~ 166 (219)
T 3phu_A 138 --GD-VFTAVNLLHSGQTHFDALRILPQFETD 166 (219)
T ss_dssp --CC-TTTSEEEEEETTTEEEEEEECTTTCCS
T ss_pred --CC-CCCeEEEEECCCcCchhheECCCCCCC
Confidence 32 25789999998 999999987554333
No 5
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.74 E-value=7.3e-19 Score=147.94 Aligned_cols=75 Identities=24% Similarity=0.457 Sum_probs=38.1
Q ss_pred CeeecccccceeeccCCCCCCCCCCeeeeeCCh---H----HHHHHHHHHhhcCcccccccceeeeeeccccchhhHHHH
Q 029139 1 MLIYDGLHYDALAISPFEGAPEEFDQTIFPVQK---D----LALKLVKEQQRKKTYTDTANFTLCYGVCQIGVIGQKAIA 73 (198)
Q Consensus 1 ~liYsGIHYD~l~~~~~~~~~~~~d~tif~~~~---~----~a~~l~~~l~~~~~~Tdt~~f~lrC~~C~~~l~lR~~vA 73 (198)
+|+|+|.|||+|.+ ++|+|+|++++ + +|++||++||++||||||++|+|||++|++.+.+++. |
T Consensus 126 ~L~Y~g~HYdsl~~--------~~d~~~f~~~~~~~~~~~~~a~~l~~~~~~~~~~t~~~~~~l~C~~C~~~~~g~~~-a 196 (212)
T 3by4_A 126 LILFNGIHYDSLTM--------NEFKTVFNKNQPESDDVLTAALQLASNLKQTGYSFNTHKAQIKCNTCQMTFVGERE-V 196 (212)
T ss_dssp EEEECSSCEEEEEE--------TTTBCCEETTSTTHHHHHHHHHHHHHHHHHTTCCC-----------------------
T ss_pred EEEEcCCcceEEec--------CCCcccCCccccchHHHHHHHHHHHHHHHHcCCcccccCeEEEcccCCCcccCHHH-H
Confidence 47899999999988 57899999887 3 5999999999999999999999999999999999985 7
Q ss_pred HHHHhcccccc
Q 029139 74 ATVASDTVKHS 84 (198)
Q Consensus 74 ~~I~~n~~~y~ 84 (198)
..|++.++|.+
T Consensus 197 ~~ha~~tgH~~ 207 (212)
T 3by4_A 197 ARHAESTGHVD 207 (212)
T ss_dssp -----------
T ss_pred HHHHHHhCCCC
Confidence 79999999975
No 6
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.68 E-value=6.1e-17 Score=138.03 Aligned_cols=92 Identities=13% Similarity=0.224 Sum_probs=76.3
Q ss_pred chhhHHHHHHHHhccccccccccC--CChHHHhh-hcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC--e--eeeCCC
Q 029139 66 VIGQKAIAATVASDTVKHSEAFIG--KSNQDYCS-WIQDPEKWGGAIELSILADYYGSEIAAYDIQTTR--C--DLYGQC 138 (198)
Q Consensus 66 l~lR~~vA~~I~~n~~~y~~~~L~--~~~~eYc~-~I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~~--~--~~~ge~ 138 (198)
..+|..+|.+|++|++.|.| ||+ .++++||+ .|+.+..|||+|||.|||+.|+++|.|++++.+. + ..|.+
T Consensus 133 ~~lR~lta~~i~~~~d~f~p-Fi~~~~~~~~yC~~~ve~~~~~~~~iei~ALa~aL~v~I~V~~~d~~~~~~~~~~~~~- 210 (234)
T 1tff_A 133 QFLRLLTSAFIRNRADFFRH-FIDEEMDIKDFCTHEVEPMATECDHIQITALSQALSIALQVEYVDEMDTALNHHVFPE- 210 (234)
T ss_dssp HHHHHHHHHHHHHTHHHHGG-GSCTTSCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-------CCCCCC-
T ss_pred HHHHHHHHHHHHHCHHHHhh-hhcCCCCHHHHHHHHhhhhhcccccHHHHHHHHHhCCCEEEEEcCCCCCccccccCCC-
Confidence 46999999999999999998 774 48999999 8999999999999999999999999999987543 1 23443
Q ss_pred cccccccCCCeEEEEecCccccccccc
Q 029139 139 SHFQEKKYSERVMLIYDELHYDAVAIS 165 (198)
Q Consensus 139 ~~~~~~~~~~~i~L~Y~G~HYdsl~~~ 165 (198)
+ ...+|+|+|.|.|||+|+..
T Consensus 211 ----~--~~~~I~LlY~pgHYdily~~ 231 (234)
T 1tff_A 211 ----A--ATPSVYLLYKTSHYNILYAA 231 (234)
T ss_dssp ----C--SSCSEEEEEETTEEEEEEEC
T ss_pred ----C--CCCeEEEEECCCCceecccC
Confidence 1 24579999999999999854
No 7
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.66 E-value=1.7e-16 Score=135.12 Aligned_cols=90 Identities=17% Similarity=0.259 Sum_probs=76.0
Q ss_pred chhhHHHHHHHHhccccccccccC--CChHHHhhh-cCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC-----eeeeCC
Q 029139 66 VIGQKAIAATVASDTVKHSEAFIG--KSNQDYCSW-IQDPEKWGGAIELSILADYYGSEIAAYDIQTTR-----CDLYGQ 137 (198)
Q Consensus 66 l~lR~~vA~~I~~n~~~y~~~~L~--~~~~eYc~~-I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~~-----~~~~ge 137 (198)
..+|..+|.+|++|++.|.| |++ .++++||++ |+.+..|||+|||.|||+.|+++|.|++++... ...|++
T Consensus 136 ~~lR~lta~yi~~~~d~f~p-Fi~~~~~~e~yc~~~ve~~~~~~~~i~i~ALa~al~v~I~V~~~d~~~~~~v~~~~f~~ 214 (234)
T 2zfy_A 136 VYLRLLTSGYLQRESKFFEH-FIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPE 214 (234)
T ss_dssp HHHHHHHHHHHHHTHHHHGG-GCCSSCCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-CCSSCCEEEEEST
T ss_pred HHHHHHHHHHHHHCHHHHhc-ccCCCCCHHHHHHHHhhhHhhcCCHHHHHHHHHHhCCCEEEEEcCCCCCCcccceeCCC
Confidence 46999999999999999998 774 489999985 899999999999999999999999999987543 134555
Q ss_pred CcccccccCCCeEEEEecCccccccc
Q 029139 138 CSHFQEKKYSERVMLIYDELHYDAVA 163 (198)
Q Consensus 138 ~~~~~~~~~~~~i~L~Y~G~HYdsl~ 163 (198)
+ ...+|+|+|.+.|||+|+
T Consensus 215 -----~--~~p~I~LlY~pgHYdiLy 233 (234)
T 2zfy_A 215 -----G--SEPKVYLLYRPGHYDILY 233 (234)
T ss_dssp -----T--CCCSEEEEEETTEEEEEE
T ss_pred -----C--CCCeEEEEECCCCcccCC
Confidence 2 245799999988999986
No 8
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.61 E-value=1.1e-15 Score=133.84 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=78.6
Q ss_pred chhhHHHHHHHHhccccccccccC-CChHHHhh-hcCCCCccchHHHHHHHHHHhCCeeEEEEcCCC--C---eee-eCC
Q 029139 66 VIGQKAIAATVASDTVKHSEAFIG-KSNQDYCS-WIQDPEKWGGAIELSILADYYGSEIAAYDIQTT--R---CDL-YGQ 137 (198)
Q Consensus 66 l~lR~~vA~~I~~n~~~y~~~~L~-~~~~eYc~-~I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~--~---~~~-~ge 137 (198)
..+|..+|.+|+.|++.|.|.+.| +++++||+ +|+.+..|||+|||.|||+.|+++|.|..++.+ . ... |-+
T Consensus 171 ~~LRllts~yi~~~~d~f~pFi~~~~~v~~yC~~eVe~~~~e~d~leI~ALa~aL~v~I~V~ylDrs~g~~v~~h~~fp~ 250 (284)
T 4dhi_B 171 MFFRLITSAFLKQNSEEYAPFIDEGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMDRTAAPNGGWHYDIPS 250 (284)
T ss_dssp HHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHHHHTSSTTCCCCHHHHHHHHHHTTCCEEEEESSGGGCTTSSSEEEESC
T ss_pred HHHHHHHHHHHHHCHHHHHhhcCCCCCHHHHHHHhceehhhcccHHHHHHHHHHhCCcEEEEEecCCCCCCCcccccCCC
Confidence 469999999999999999994444 68999999 999999999999999999999999999987642 1 234 633
Q ss_pred Cccccccc-CCCeEEEEecCcccccccccc
Q 029139 138 CSHFQEKK-YSERVMLIYDELHYDAVAISA 166 (198)
Q Consensus 138 ~~~~~~~~-~~~~i~L~Y~G~HYdsl~~~~ 166 (198)
+.. ....|.|+|.+.|||.|+..+
T Consensus 251 -----~~~~~~p~I~LLYrpgHYDILY~~~ 275 (284)
T 4dhi_B 251 -----DDQQIAPEITLLYRPGHYDVIYKKD 275 (284)
T ss_dssp -----CCSCCCCSEEEEEETTEEEEEEECC
T ss_pred -----CCCCCCCEEEEeecCCCccccccCC
Confidence 211 125699999999999999764
No 9
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.34 E-value=1.7e-12 Score=117.80 Aligned_cols=90 Identities=17% Similarity=0.254 Sum_probs=76.0
Q ss_pred chhhHHHHHHHHhccccccccccC--CChHHHhh-hcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC-----eeeeCC
Q 029139 66 VIGQKAIAATVASDTVKHSEAFIG--KSNQDYCS-WIQDPEKWGGAIELSILADYYGSEIAAYDIQTTR-----CDLYGQ 137 (198)
Q Consensus 66 l~lR~~vA~~I~~n~~~y~~~~L~--~~~~eYc~-~I~~~~~WGG~iEL~aLS~~~~~~I~v~~~~~~~-----~~~~ge 137 (198)
..+|..+|.+|+.|++.|.| |+. .++++||+ .|+.+..|||+|||.|||+.|+++|.|+..+.+. ...|++
T Consensus 301 ~~lRllts~~i~~~~d~f~p-Fi~~~~~v~~yc~~~ve~~~~e~d~l~I~ALa~al~v~I~V~yld~~~~~~v~~~~~~~ 379 (399)
T 4ddg_A 301 VYLRLLTSGYLQRESKFFEH-FIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPE 379 (399)
T ss_dssp HHHHHHHHHHHHHTHHHHGG-GSSSSCCHHHHHHHHTSSTTCCBCHHHHHHHHHHHTCCCEEEECSCCSSSCCCEEETTT
T ss_pred HHHHHHHHHHHHHCHHHHhc-ccCCCCCHHHHHHHhceeHHhhCcHHHHHHHHHHcCCcEEEEEcCCCCCCccceeeCCC
Confidence 36999999999999999998 663 58999999 9999999999999999999999999999766422 234544
Q ss_pred CcccccccCCCeEEEEecCccccccc
Q 029139 138 CSHFQEKKYSERVMLIYDELHYDAVA 163 (198)
Q Consensus 138 ~~~~~~~~~~~~i~L~Y~G~HYdsl~ 163 (198)
+ ....|+|+|..-|||.|+
T Consensus 380 -----~--~~~~I~LLYrPgHYDiLY 398 (399)
T 4ddg_A 380 -----G--SEPKVYLLYRPGHYDILY 398 (399)
T ss_dssp -----T--CCCCCEEEEETBEEEEEE
T ss_pred -----C--CCCEEEEEEcCCccccCC
Confidence 2 246799999988999986
No 10
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=84.47 E-value=0.39 Score=40.14 Aligned_cols=19 Identities=42% Similarity=0.562 Sum_probs=15.2
Q ss_pred Ceeecc-cccceeeccCCCC
Q 029139 1 MLIYDG-LHYDALAISPFEG 19 (198)
Q Consensus 1 ~liYsG-IHYD~l~~~~~~~ 19 (198)
+|+|+| +|||+|...+...
T Consensus 145 ~L~Y~g~~HYdSL~~~~d~~ 164 (219)
T 3phu_A 145 NLLHSGQTHFDALRILPQFE 164 (219)
T ss_dssp EEEEETTTEEEEEEECTTTC
T ss_pred EEEECCCcCchhheECCCCC
Confidence 378999 9999998875543
No 11
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=74.28 E-value=5.4 Score=35.97 Aligned_cols=56 Identities=18% Similarity=0.260 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhCCeeEEEEcCCCCe---------eeeCCCccc------ccccCCCeEEEEecCccccccccc
Q 029139 108 AIELSILADYYGSEIAAYDIQTTRC---------DLYGQCSHF------QEKKYSERVMLIYDELHYDAVAIS 165 (198)
Q Consensus 108 ~iEL~aLS~~~~~~I~v~~~~~~~~---------~~~ge~~~~------~~~~~~~~i~L~Y~G~HYdsl~~~ 165 (198)
+|=+.+||++++.||.|+...-.+. ..||. -| .+.=+..+|.|.|+-.||=+|+--
T Consensus 213 eiHIFvLAhVLRRPIIV~~d~~lr~~~~Ge~~~Pi~f~G--IYLPLlwpp~~C~rsPI~LgY~s~HFsaLV~m 283 (390)
T 3dkb_A 213 EIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGG--IYLPLHWPAQECYRYPIVLGYDSHHFVPLVTL 283 (390)
T ss_dssp HHHHHHHHHHTTSCEEEEECCCCTTCCCC----CCCCCE--EECCTTSCTTSSCSSCEEEEECSSCEEEEEEB
T ss_pred HHHHHHHHHHhcCCEEEEechhhccccCCCccCcCccCc--eecCCcCCHHHccCCceEEEeccCceeeeeec
Confidence 6778999999999999995331111 12221 00 011234689999999999999853
No 12
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=63.99 E-value=9.3 Score=35.03 Aligned_cols=56 Identities=16% Similarity=0.273 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhCCeeEEEEcCCCCe--------eeeCCCccc------ccccCCCeEEEEecCccccccccc
Q 029139 108 AIELSILADYYGSEIAAYDIQTTRC--------DLYGQCSHF------QEKKYSERVMLIYDELHYDAVAIS 165 (198)
Q Consensus 108 ~iEL~aLS~~~~~~I~v~~~~~~~~--------~~~ge~~~~------~~~~~~~~i~L~Y~G~HYdsl~~~ 165 (198)
+|=+.+||++++.||.||.....+. ..||. -| .+.=+..||.|.|+-.||=+|+--
T Consensus 280 eiHIFvLAhVLRRPIIV~~d~~lrs~~Ge~l~pi~f~G--IYLPLlwpp~~C~rsPIvLgY~~gHFsaLV~~ 349 (454)
T 3zrh_A 280 QTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQG--VYLPLLWEQSFCWKSPIALGYTRGHFSALVAM 349 (454)
T ss_dssp HHHHHHHHHHTTSCEEEEECSSCC-----CCCCCCCCE--EECCTTSCGGGSCSCCEEEEEETTEEEEEEEB
T ss_pred HHHHHHHHHHhcCCeEEeccccccccCCCcCCCcccce--eeccCcCCHHHhcCCceEEEecccceeeeeec
Confidence 4668899999999999998765432 12221 00 011134689999998899999864
No 13
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=41.13 E-value=14 Score=18.10 Aligned_cols=22 Identities=14% Similarity=0.350 Sum_probs=13.9
Q ss_pred eeeeccccchhhHHHHHHHHhc
Q 029139 58 CYGVCQIGVIGQKAIAATVASD 79 (198)
Q Consensus 58 rC~~C~~~l~lR~~vA~~I~~n 79 (198)
+|..|+..+.-+......++.+
T Consensus 3 ~C~~C~k~f~~~~~l~~H~~~h 24 (27)
T 1znf_A 3 KCGLCERSFVEKSALSRHQRVH 24 (27)
T ss_dssp BCSSSCCBCSSHHHHHHHGGGT
T ss_pred cCCCCCCcCCCHHHHHHHHHHc
Confidence 6899998876555444444443
No 14
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=34.92 E-value=20 Score=17.60 Aligned_cols=24 Identities=21% Similarity=0.279 Sum_probs=15.3
Q ss_pred eeeeeccccchhhHHHHHHHHhcc
Q 029139 57 LCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
.+|..|+..+.-+......++.++
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~h~ 26 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRSHT 26 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred eECCCCCcccCCHHHHHHHHHHhc
Confidence 369999988766555554444443
No 15
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.47 E-value=12 Score=29.74 Aligned_cols=31 Identities=3% Similarity=0.066 Sum_probs=25.0
Q ss_pred cccceeeeeeccc--cchhhHHHHHHHHhcccc
Q 029139 52 TANFTLCYGVCQI--GVIGQKAIAATVASDTVK 82 (198)
Q Consensus 52 t~~f~lrC~~C~~--~l~lR~~vA~~I~~n~~~ 82 (198)
...+.|+|..||. .+..|...+.+|.+||-.
T Consensus 122 ~r~~~l~C~ACGa~~~V~~~~Kl~~~i~knpp~ 154 (157)
T 2e9h_A 122 KQTIGNSCKACGYRGMLDTHHKLCTFILKNPPE 154 (157)
T ss_dssp TTEEEEECSSSCCEEECCCCSSHHHHHHHSCCC
T ss_pred CCEEEEEccCCCCCCcccchhhhhhhhhcCCCC
Confidence 4569999999995 466777889999998853
No 16
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=34.04 E-value=22 Score=17.56 Aligned_cols=24 Identities=4% Similarity=0.144 Sum_probs=15.5
Q ss_pred eeeeeccccchhhHHHHHHHHhcc
Q 029139 57 LCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
.+|..|+..+.-+......++.+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILLHE 26 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTGGG
T ss_pred ccCCCCCchhCCHHHHHHHHHHhc
Confidence 479999988766555554454443
No 17
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=33.84 E-value=13 Score=29.80 Aligned_cols=32 Identities=3% Similarity=0.076 Sum_probs=25.9
Q ss_pred cccceeeeeeccc--cchhhHHHHHHHHhccccc
Q 029139 52 TANFTLCYGVCQI--GVIGQKAIAATVASDTVKH 83 (198)
Q Consensus 52 t~~f~lrC~~C~~--~l~lR~~vA~~I~~n~~~y 83 (198)
...+.|+|..||. .+..|...+.+|.+||-.-
T Consensus 115 ~r~~~l~C~ACGa~~~V~~~~kl~t~i~knpp~~ 148 (170)
T 2g2k_A 115 KQTIGNSCKACGYRGMLDTHHKLCTFILKNPPEN 148 (170)
T ss_dssp TTEEEEEETTTCCCCCSCSSSSHHHHHHTSCCCC
T ss_pred CCEEEEEccccCCccccccccceeeeeeecCCCC
Confidence 4668899999995 4667767899999999764
No 18
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=32.94 E-value=24 Score=17.37 Aligned_cols=21 Identities=10% Similarity=0.124 Sum_probs=13.3
Q ss_pred eeeeeccccchhhHHHHHHHH
Q 029139 57 LCYGVCQIGVIGQKAIAATVA 77 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~I~ 77 (198)
-+|..|+..+.-+......++
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 4 YSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp EECSSSCCEESCHHHHHHHHT
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 469999988765554443333
No 19
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=31.79 E-value=26 Score=17.15 Aligned_cols=24 Identities=4% Similarity=0.058 Sum_probs=15.0
Q ss_pred eeeeeccccchhhHHHHHHHHhcc
Q 029139 57 LCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
.+|..|+..+.-.......++.+.
T Consensus 4 ~~C~~C~~~f~~~~~l~~H~~~h~ 27 (30)
T 2m0d_A 4 YQCDYCGRSFSDPTSKMRHLETHD 27 (30)
T ss_dssp EECTTTCCEESCHHHHHHHHHTTC
T ss_pred ccCCCCCcccCCHHHHHHHHHHhc
Confidence 479999988765554444444443
No 20
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=30.31 E-value=23 Score=17.31 Aligned_cols=23 Identities=9% Similarity=0.056 Sum_probs=13.9
Q ss_pred eeeeeccccchhhHHHHHHHHhc
Q 029139 57 LCYGVCQIGVIGQKAIAATVASD 79 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~I~~n 79 (198)
.+|..|+..+.-+......++.+
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 3 LKCRECGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp EECTTTSCEESCHHHHHHHHHHH
T ss_pred ccCCCCCCccCChhHHHHHHHHh
Confidence 36899998775554444444443
No 21
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=30.12 E-value=27 Score=29.31 Aligned_cols=41 Identities=10% Similarity=0.116 Sum_probs=24.1
Q ss_pred ccccceeeccCCCCCCCCCCeeeee-CCh-----HHHHHHHHHHhhcC
Q 029139 6 GLHYDALAISPFEGAPEEFDQTIFP-VQK-----DLALKLVKEQQRKK 47 (198)
Q Consensus 6 GIHYD~l~~~~~~~~~~~~d~tif~-~~~-----~~a~~l~~~l~~~~ 47 (198)
|-|||++...+....+. ...+.|+ .+| ...+++|+.|++.+
T Consensus 100 ~aH~Ds~~~~~~~~~~~-~~~~~~~GA~D~aSG~a~lLE~ar~l~~~~ 146 (309)
T 4fuu_A 100 FAHWDTRPWADNDADEK-NHHTPILGANDGASGVGALLEIARLVNQQQ 146 (309)
T ss_dssp EEECCCCSCCTTCSSGG-GTTSCCCCTTTTHHHHHHHHHHHHHHHHSC
T ss_pred EeecCCCCCCCCccccc-cccCCcCCcccCchhHHHHHHHHHHHhhcC
Confidence 67999997764332111 1123333 344 23889999998754
No 22
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.02 E-value=30 Score=18.11 Aligned_cols=25 Identities=8% Similarity=0.085 Sum_probs=16.5
Q ss_pred eeeeeeccccchhhHHHHHHHHhcc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
..+|..|+..+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRKHT 33 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHT
T ss_pred CCCCCCCCcccCCHHHHHHHHHHcc
Confidence 4589999988766655554554443
No 23
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.05 E-value=50 Score=18.41 Aligned_cols=34 Identities=6% Similarity=0.014 Sum_probs=22.1
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~ 37 (44)
T 2epv_A 4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37 (44)
T ss_dssp CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS
T ss_pred CcccCCCcCeECCCCCcccCchHHHHHHHhHhcC
Confidence 3344445556899999988766665655555544
No 24
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=27.69 E-value=47 Score=17.45 Aligned_cols=28 Identities=11% Similarity=0.011 Sum_probs=17.5
Q ss_pred cccceeeeeeccccchhhHHHHHHHHhc
Q 029139 52 TANFTLCYGVCQIGVIGQKAIAATVASD 79 (198)
Q Consensus 52 t~~f~lrC~~C~~~l~lR~~vA~~I~~n 79 (198)
+..-.-+|..|+..+.-+......++.+
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 7 TGIKPFQCPDCDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp CCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred CCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence 3344468999998876655545444444
No 25
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=27.19 E-value=37 Score=16.48 Aligned_cols=19 Identities=11% Similarity=0.198 Sum_probs=12.3
Q ss_pred eeeeeccccchhhHHHHHH
Q 029139 57 LCYGVCQIGVIGQKAIAAT 75 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~ 75 (198)
.+|..|+..+.-+......
T Consensus 4 ~~C~~C~k~f~~~~~l~~H 22 (27)
T 2kvh_A 4 FSCSLCPQRSRDFSAMTKH 22 (27)
T ss_dssp EECSSSSCEESSHHHHHHH
T ss_pred ccCCCcChhhCCHHHHHHH
Confidence 4799999887655443333
No 26
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.93 E-value=32 Score=18.01 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=15.8
Q ss_pred eeeeeeccccchhhHHHHHHHHhcc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
..+|..|+..+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLLHT 33 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred CeecCcCCCCcCchHHHHHHHHHhc
Confidence 4579999988765554444444443
No 27
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=26.78 E-value=53 Score=16.96 Aligned_cols=26 Identities=12% Similarity=0.160 Sum_probs=17.7
Q ss_pred eeeeeeccccchhhHHHHHHHHhccc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+|..|+..+.-+......++.+.+
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~H~~ 32 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKVHTD 32 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred CeeCCCCCcccCCHHHHHHHHHHcCC
Confidence 35899999988766655555555543
No 28
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.59 E-value=38 Score=17.79 Aligned_cols=25 Identities=8% Similarity=0.279 Sum_probs=16.5
Q ss_pred eeeeeeccccchhhHHHHHHHHhcc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
..+|..|+..+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHHSS
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 3589999988765555554555444
No 29
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=26.47 E-value=30 Score=16.88 Aligned_cols=23 Identities=4% Similarity=0.203 Sum_probs=14.0
Q ss_pred eeeeeccccchhhHHHHHHHHhc
Q 029139 57 LCYGVCQIGVIGQKAIAATVASD 79 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~I~~n 79 (198)
.+|..|+..+.-+......++.+
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~h 25 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKTK 25 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHHH
Confidence 36899998776555444444443
No 30
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.46 E-value=35 Score=17.97 Aligned_cols=25 Identities=4% Similarity=-0.008 Sum_probs=16.7
Q ss_pred eeeeeeccccchhhHHHHHHHHhcc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
..+|..|+..+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLVHG 33 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHhc
Confidence 4589999988766665554555443
No 31
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=26.10 E-value=9.6 Score=27.41 Aligned_cols=61 Identities=13% Similarity=0.064 Sum_probs=33.2
Q ss_pred HHhhcCcccccccceeeeeeccccchhhHHHHHHHHhccccc--cccccCCChHHHhhhcCCC
Q 029139 42 EQQRKKTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTVKH--SEAFIGKSNQDYCSWIQDP 102 (198)
Q Consensus 42 ~l~~~~~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~~y--~~~~L~~~~~eYc~~I~~~ 102 (198)
+|-+++-|..-.+..++|-.|+..|..-+.--+...+|...+ -+.++...-.+|++.|+..
T Consensus 32 ~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~f~~~~kg~~fv~~i~~~ 94 (95)
T 3hl5_A 32 QLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLT 94 (95)
T ss_dssp HHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHTCHHHHHHHTTT
T ss_pred HHHhCCCeEcCCCCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCcchHhhccHHHHHHHHcc
Confidence 344445544446789999999987753332222333333333 1222334456888877643
No 32
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.10 E-value=33 Score=18.06 Aligned_cols=25 Identities=12% Similarity=0.113 Sum_probs=16.1
Q ss_pred eeeeeeccccchhhHHHHHHHHhcc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDT 80 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~ 80 (198)
..+|..|+..+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRIHT 33 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHC
T ss_pred CEECCCCCceeCCHHHHHHHHHHhC
Confidence 3579999988765555554444443
No 33
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.94 E-value=55 Score=18.28 Aligned_cols=35 Identities=9% Similarity=0.006 Sum_probs=22.7
Q ss_pred CcccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 47 KTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 47 ~~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytj_A 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37 (46)
T ss_dssp SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC
Confidence 33444555557899999988766655555555554
No 34
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.99 E-value=53 Score=18.34 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=22.3
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhcccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTVK 82 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~~ 82 (198)
.-+-+..-..+|..|+..+.-+......++.+.+.
T Consensus 4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2em3_A 4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE 38 (46)
T ss_dssp CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCC
T ss_pred CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCC
Confidence 33444445568999999886666555555555543
No 35
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.72 E-value=51 Score=18.36 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=22.3
Q ss_pred CcccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 47 KTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 47 ~~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ep1_A 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37 (46)
T ss_dssp CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS
T ss_pred cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC
Confidence 33344445556899999988766665555555544
No 36
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.66 E-value=56 Score=18.17 Aligned_cols=34 Identities=12% Similarity=0.080 Sum_probs=22.0
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2yrj_A 4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37 (46)
T ss_dssp CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS
T ss_pred ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 3344555557899999988766655555555544
No 37
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=24.63 E-value=3.1 Score=30.04 Aligned_cols=23 Identities=26% Similarity=0.631 Sum_probs=18.1
Q ss_pred CCChHHHhhhcCCCCccchHHHH
Q 029139 89 GKSNQDYCSWIQDPEKWGGAIEL 111 (198)
Q Consensus 89 ~~~~~eYc~~I~~~~~WGG~iEL 111 (198)
=++++|=+-.|+++..|||.+.|
T Consensus 39 KKDLEE~VVs~E~~~~WGG~vtL 61 (87)
T 2jn4_A 39 KKDLEELIVEMENPALWGGKVTL 61 (87)
T ss_dssp TTTEEEEEEEESSSSSCSSEEEE
T ss_pred CCcchhheeeeecccccCcEEEE
Confidence 46777777788899999997644
No 38
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=24.57 E-value=29 Score=16.80 Aligned_cols=20 Identities=10% Similarity=0.029 Sum_probs=11.6
Q ss_pred eeeeccccchhhHHHHHHHH
Q 029139 58 CYGVCQIGVIGQKAIAATVA 77 (198)
Q Consensus 58 rC~~C~~~l~lR~~vA~~I~ 77 (198)
+|..|+..+.-.......++
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 4 KCPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CCSSCCCCCCTTTHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHH
Confidence 68889887654443333333
No 39
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=24.56 E-value=38 Score=17.77 Aligned_cols=24 Identities=4% Similarity=0.184 Sum_probs=15.7
Q ss_pred eeeeccccchhhHHHHHHHHhccc
Q 029139 58 CYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 58 rC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.|..|+..+.-.......++.+.+
T Consensus 4 ~C~~C~k~F~~~~~L~~H~~~H~~ 27 (33)
T 1rim_A 4 ACPECPKRFMRSDHLSKHITLHEL 27 (33)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred cCCCCCchhCCHHHHHHHHHHhCC
Confidence 699999887655555555555544
No 40
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.51 E-value=54 Score=18.37 Aligned_cols=34 Identities=9% Similarity=0.004 Sum_probs=22.1
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2em5_A 4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37 (46)
T ss_dssp CCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred cCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCC
Confidence 3344455557899999988766665655555544
No 41
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=24.42 E-value=41 Score=18.19 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=18.2
Q ss_pred eeeeeccccchhhHHHHHHHHhcccc
Q 029139 57 LCYGVCQIGVIGQKAIAATVASDTVK 82 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~I~~n~~~ 82 (198)
.+|..|+..+.-+......++.+.+.
T Consensus 7 ~~C~~C~k~f~~~~~L~~H~~~H~~~ 32 (39)
T 1njq_A 7 YTCSFCKREFRSAQALGGHMNVHRRD 32 (39)
T ss_dssp EECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred eECCCCCcccCCHHHHHHHHHHcCCC
Confidence 58999999887666655556655543
No 42
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=24.36 E-value=59 Score=16.64 Aligned_cols=26 Identities=4% Similarity=0.101 Sum_probs=17.0
Q ss_pred eeeeeeccccchhhHHHHHHHHhccc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
..+|..|+..+.-+......++.+.+
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~ 32 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIREVHG 32 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred CeECCCCcchhCCHHHHHHHHHHHcC
Confidence 35899999887665555555555443
No 43
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.11 E-value=55 Score=18.27 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=22.4
Q ss_pred CcccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 47 KTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 47 ~~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ep3_A 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37 (46)
T ss_dssp CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT
T ss_pred CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 33444555567899999988766655555555544
No 44
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.03 E-value=65 Score=17.89 Aligned_cols=34 Identities=6% Similarity=-0.052 Sum_probs=22.0
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eme_A 4 GSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37 (46)
T ss_dssp CCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC
T ss_pred CCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC
Confidence 3344445557899999988766665555555544
No 45
>1lg4_A Doppel protein, prion-like protein; scrapie, prion protein; NMR {Homo sapiens} SCOP: d.6.1.1
Probab=23.90 E-value=20 Score=27.10 Aligned_cols=12 Identities=33% Similarity=0.708 Sum_probs=9.0
Q ss_pred ecccccceeecc
Q 029139 4 YDGLHYDALAIS 15 (198)
Q Consensus 4 YsGIHYD~l~~~ 15 (198)
=||||||.-+-+
T Consensus 63 PDgIhY~gCsea 74 (129)
T 1lg4_A 63 PDGIHYNGCSEA 74 (129)
T ss_dssp CSCCCSCSCCCS
T ss_pred CCcccccccccc
Confidence 389999987443
No 46
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.88 E-value=54 Score=18.37 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=21.9
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eoz_A 4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37 (46)
T ss_dssp CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS
T ss_pred cccCCCCCCeECcccChhhCCHHHHHHHHHHhCC
Confidence 3344455556899999988766655555555544
No 47
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.85 E-value=44 Score=18.41 Aligned_cols=33 Identities=9% Similarity=0.034 Sum_probs=21.2
Q ss_pred ccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 49 YTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 49 ~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (44)
T 2en7_A 5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37 (44)
T ss_dssp CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC
T ss_pred cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC
Confidence 344444456899999988766655555555544
No 48
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.83 E-value=55 Score=18.21 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=21.5
Q ss_pred ccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 49 YTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 49 ~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eow_A 5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37 (46)
T ss_dssp CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC
T ss_pred CCCCCCCCeeccccCChhcCHHHHHHHHHHcCC
Confidence 344445557899999988666655555555554
No 49
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=23.20 E-value=55 Score=18.21 Aligned_cols=34 Identities=12% Similarity=-0.022 Sum_probs=22.0
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2el4_A 4 GSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37 (46)
T ss_dssp CCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS
T ss_pred ccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC
Confidence 3344455556899999988766665555555544
No 50
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=23.18 E-value=60 Score=18.17 Aligned_cols=35 Identities=11% Similarity=0.006 Sum_probs=21.8
Q ss_pred CcccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 47 KTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 47 ~~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2emj_A 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37 (46)
T ss_dssp CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC
Confidence 33344445556899999987666655555555544
No 51
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=23.08 E-value=40 Score=16.57 Aligned_cols=17 Identities=12% Similarity=0.305 Sum_probs=11.2
Q ss_pred eeeeeccccchhhHHHH
Q 029139 57 LCYGVCQIGVIGQKAIA 73 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA 73 (198)
.+|..|+..+.-+....
T Consensus 4 ~~C~~C~k~f~~~~~l~ 20 (27)
T 2kvg_A 4 YRCPLCRAGCPSLASMQ 20 (27)
T ss_dssp EEETTTTEEESCHHHHH
T ss_pred cCCCCCCcccCCHHHHH
Confidence 37999998775544333
No 52
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.96 E-value=42 Score=17.66 Aligned_cols=26 Identities=12% Similarity=0.296 Sum_probs=16.6
Q ss_pred eeeeeeccccchhhHHHHHHHHhccc
Q 029139 56 TLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 56 ~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
..+|..|+..+.-+......++.+++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~h~~ 34 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKTNHP 34 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred CcCCCCCCCccCCHHHHHHHHHHHcC
Confidence 35799999887655554544454443
No 53
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=22.74 E-value=31 Score=24.52 Aligned_cols=32 Identities=16% Similarity=0.347 Sum_probs=22.7
Q ss_pred ccceeeeeeccccchhhHHHHHHHHhccccccccccCCChHHHhhhc
Q 029139 53 ANFTLCYGVCQIGVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWI 99 (198)
Q Consensus 53 ~~f~lrC~~C~~~l~lR~~vA~~I~~n~~~y~~~~L~~~~~eYc~~I 99 (198)
....|.|.+|+..++.+ -..|.+|++-|-+||
T Consensus 44 ~~g~l~C~~Cg~~~~~~---------------i~~L~epiDVYs~Wi 75 (85)
T 1wii_A 44 NTGVISCTVCLEEFQTP---------------ITYLSEPVDVYSDWI 75 (85)
T ss_dssp TEEEEEESSSCCEEEEE---------------CCSSCCTTHHHHHHH
T ss_pred CEEEEEcccCCCeEEec---------------cCccCcchhhHHHHH
Confidence 46789999997543221 124778999999997
No 54
>1i17_A Mouse doppel, prion-like protein; DPL, unknown function; NMR {Mus musculus} SCOP: d.6.1.1
Probab=22.70 E-value=18 Score=26.50 Aligned_cols=12 Identities=25% Similarity=0.495 Sum_probs=8.9
Q ss_pred ecccccceeecc
Q 029139 4 YDGLHYDALAIS 15 (198)
Q Consensus 4 YsGIHYD~l~~~ 15 (198)
=||||||.-+-+
T Consensus 37 PDgIhY~gCsea 48 (107)
T 1i17_A 37 PDGIYYEGCSEA 48 (107)
T ss_dssp CSEEECCCCSST
T ss_pred CCcccccccccc
Confidence 389999987443
No 55
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.66 E-value=52 Score=18.32 Aligned_cols=35 Identities=9% Similarity=-0.082 Sum_probs=22.0
Q ss_pred CcccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 47 KTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 47 ~~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eop_A 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37 (46)
T ss_dssp CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT
T ss_pred CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC
Confidence 33344555557899999988666655555555543
No 56
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=22.21 E-value=72 Score=17.73 Aligned_cols=34 Identities=9% Similarity=-0.032 Sum_probs=21.9
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ema_A 4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37 (46)
T ss_dssp CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC
T ss_pred ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC
Confidence 3344455557899999988666655555555544
No 57
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.09 E-value=65 Score=17.73 Aligned_cols=34 Identities=3% Similarity=0.009 Sum_probs=21.7
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (44)
T 2yu5_A 4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37 (44)
T ss_dssp SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC
T ss_pred ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC
Confidence 3344444556899999988666655555555544
No 58
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.08 E-value=65 Score=17.61 Aligned_cols=32 Identities=13% Similarity=0.089 Sum_probs=21.0
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+.+..-..+|..|+..+.-+......++.+.+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (44)
T 2eof_A 6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37 (44)
T ss_dssp CCSCCCSEECTTTCCEESCHHHHHHHHHHTTT
T ss_pred CCCCCCCeECCCCCcccCCHhHHHHHHHHhCC
Confidence 44445556899999988666655555555544
No 59
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.91 E-value=67 Score=17.83 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=21.9
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2emm_A 4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37 (46)
T ss_dssp CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC
T ss_pred cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC
Confidence 3344555557899999988666655555555544
No 60
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.88 E-value=67 Score=17.95 Aligned_cols=33 Identities=12% Similarity=0.005 Sum_probs=21.1
Q ss_pred ccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 49 YTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 49 ~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2em4_A 5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37 (46)
T ss_dssp CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC
Confidence 344444456899999988666655555555544
No 61
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.80 E-value=67 Score=17.89 Aligned_cols=34 Identities=6% Similarity=-0.051 Sum_probs=21.7
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytk_A 4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37 (46)
T ss_dssp CCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred cccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC
Confidence 3344445556899999987666655555555544
No 62
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.77 E-value=61 Score=18.00 Aligned_cols=32 Identities=13% Similarity=0.093 Sum_probs=20.9
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+-+..-..+|..|+..+.-+......++.+++
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2yts_A 6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37 (46)
T ss_dssp CCCSCCSEECSSSCCEESSHHHHHHHGGGTSS
T ss_pred CCCCCcCEECCCCChhhCChHHHHHHHHhcCC
Confidence 44445556899999988766655555555544
No 63
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.42 E-value=76 Score=17.56 Aligned_cols=32 Identities=13% Similarity=0.108 Sum_probs=21.2
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+-+..-..+|..|+..+.-+......++.+.+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytf_A 6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37 (46)
T ss_dssp SSCCCCSEECSSSCCEESSHHHHHHHHHTSCS
T ss_pred CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC
Confidence 34444456899999988766665555555554
No 64
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.30 E-value=72 Score=17.73 Aligned_cols=34 Identities=6% Similarity=-0.017 Sum_probs=21.5
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2emy_A 4 GSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37 (46)
T ss_dssp CCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT
T ss_pred CCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC
Confidence 3344455557899999987666555555555544
No 65
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.27 E-value=66 Score=17.87 Aligned_cols=33 Identities=12% Similarity=-0.000 Sum_probs=21.5
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhcccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTVK 82 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~~ 82 (198)
+.+..-..+|..|+..+.-+......++.+.+.
T Consensus 6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2eoe_A 6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGV 38 (46)
T ss_dssp CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCC
T ss_pred CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCC
Confidence 344444568999999887666655555555543
No 66
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.24 E-value=72 Score=17.80 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=21.4
Q ss_pred ccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 49 YTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 49 ~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2ytp_A 5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37 (46)
T ss_dssp CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC
Confidence 344445556899999988766655555555544
No 67
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.21 E-value=83 Score=17.44 Aligned_cols=32 Identities=9% Similarity=0.076 Sum_probs=21.0
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+-+..-..+|..|+..+.-+......++.+.+
T Consensus 6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2emi_A 6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37 (46)
T ss_dssp SCSSCCCEECSSSCCEESSHHHHHHHHGGGCS
T ss_pred ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC
Confidence 34444456899999988766655555555544
No 68
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.04 E-value=81 Score=17.50 Aligned_cols=32 Identities=9% Similarity=0.116 Sum_probs=21.2
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+-+..-..+|..|+..+.-+......++.+.+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eml_A 6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37 (46)
T ss_dssp CCSSCCSEECSSSCCEESSHHHHHHHHGGGSS
T ss_pred CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC
Confidence 44444556899999988766665555555544
No 69
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.02 E-value=79 Score=17.56 Aligned_cols=33 Identities=9% Similarity=0.103 Sum_probs=22.0
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhcccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTVK 82 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~~ 82 (198)
+.+..-..+|..|+..+.-+......++.+.+.
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ep2_A 6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGE 38 (46)
T ss_dssp CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSC
T ss_pred CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCC
Confidence 344445568999999887766666566665543
No 70
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.94 E-value=75 Score=17.73 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=21.4
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+-+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2yto_A 4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37 (46)
T ss_dssp CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC
T ss_pred ccccCCCCCEECcccCCccCCHhHHHHHHHHcCC
Confidence 3344455567899999887665555555555544
No 71
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=20.79 E-value=34 Score=16.90 Aligned_cols=19 Identities=11% Similarity=0.336 Sum_probs=12.3
Q ss_pred eeeeeccccchhhHHHHHH
Q 029139 57 LCYGVCQIGVIGQKAIAAT 75 (198)
Q Consensus 57 lrC~~C~~~l~lR~~vA~~ 75 (198)
.+|..|+..+.-+......
T Consensus 3 ~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHH
T ss_pred cCCcccCcccCChHHHHHH
Confidence 3689999887655544433
No 72
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.75 E-value=68 Score=17.80 Aligned_cols=34 Identities=6% Similarity=-0.063 Sum_probs=21.5
Q ss_pred cccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 48 TYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 48 ~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eq4_A 4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37 (46)
T ss_dssp CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS
T ss_pred cccCCCCCCeECCCCCCccCchHHHHHHHHhcCC
Confidence 3344455556899999887666655555555544
No 73
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=20.69 E-value=61 Score=18.07 Aligned_cols=35 Identities=6% Similarity=-0.016 Sum_probs=21.5
Q ss_pred CcccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 47 KTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 47 ~~~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+.-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2em0_A 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37 (46)
T ss_dssp CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS
T ss_pred CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC
Confidence 33344445556899999988666655544455443
No 74
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.51 E-value=62 Score=18.04 Aligned_cols=33 Identities=9% Similarity=0.011 Sum_probs=21.2
Q ss_pred ccccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 49 YTDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 49 ~Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
-+.+..-..+|..|+..+.-+......++.+.+
T Consensus 5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2emg_A 5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37 (46)
T ss_dssp CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC
T ss_pred CCCCCCCCEECCccCcccCCHHHHHHHHHHhCC
Confidence 334444456899999988766665555555544
No 75
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.24 E-value=72 Score=17.75 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=21.1
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhcccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTVK 82 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~~ 82 (198)
+-+..-..+|..|+..+.-+......++.+++.
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2eoq_A 6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAE 38 (46)
T ss_dssp CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCC
T ss_pred CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCC
Confidence 344444568999999886666555555555443
No 76
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.21 E-value=72 Score=17.80 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=20.3
Q ss_pred cccccceeeeeeccccchhhHHHHHHHHhccc
Q 029139 50 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 81 (198)
Q Consensus 50 Tdt~~f~lrC~~C~~~l~lR~~vA~~I~~n~~ 81 (198)
+-+..-..+|..|+..+.-+......++.+++
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2em6_A 6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37 (46)
T ss_dssp CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS
T ss_pred ccCCCCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence 34444456899999987666655545555544
No 77
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=25.52 E-value=22 Score=17.68 Aligned_cols=14 Identities=7% Similarity=0.031 Sum_probs=9.2
Q ss_pred eeeeeccccchhhH
Q 029139 57 LCYGVCQIGVIGQK 70 (198)
Q Consensus 57 lrC~~C~~~l~lR~ 70 (198)
.+|..|+..+.-+.
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 3 CQCVMCGKAFTQAS 16 (29)
Confidence 36888987764443
Done!