Query 029141
Match_columns 198
No_of_seqs 133 out of 1347
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 13:07:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dy0_A APRT, adenine phosphori 100.0 5.9E-33 2E-37 222.2 19.0 178 8-186 10-187 (190)
2 1g2q_A Adenine phosphoribosylt 100.0 3.1E-32 1.1E-36 217.5 17.4 175 10-188 4-182 (187)
3 1qb7_A APRT, adenine phosphori 100.0 6.6E-32 2.3E-36 223.3 17.2 182 8-189 14-208 (236)
4 1zn8_A APRT, adenine phosphori 100.0 9.7E-32 3.3E-36 213.1 17.3 174 10-186 3-179 (180)
5 1l1q_A Adenine phosphoribosylt 100.0 4.1E-31 1.4E-35 210.9 18.5 173 10-183 2-177 (186)
6 3m3h_A OPRT, oprtase, orotate 99.9 7.3E-26 2.5E-30 186.8 15.6 152 26-192 47-204 (234)
7 1y0b_A Xanthine phosphoribosyl 99.9 3E-25 1E-29 178.0 16.7 172 12-188 7-183 (197)
8 3dez_A OPRT, oprtase, orotate 99.9 2.9E-25 9.9E-30 184.1 15.2 147 32-193 69-217 (243)
9 2wns_A Orotate phosphoribosylt 99.9 2.4E-24 8.3E-29 174.3 15.5 146 32-193 31-178 (205)
10 1vch_A Phosphoribosyltransfera 99.9 4.4E-25 1.5E-29 173.8 10.8 159 15-185 7-171 (175)
11 2p1z_A Phosphoribosyltransfera 99.9 1.1E-24 3.8E-29 172.9 13.0 142 32-189 34-177 (180)
12 2yzk_A OPRT, oprtase, orotate 99.9 2.6E-24 8.8E-29 170.5 14.7 144 32-192 27-172 (178)
13 1o57_A PUR operon repressor; p 99.9 3.6E-24 1.2E-28 181.9 16.5 164 12-187 87-253 (291)
14 3mjd_A Orotate phosphoribosylt 99.9 7.4E-24 2.5E-28 174.6 15.2 143 32-191 51-209 (232)
15 3qw4_B UMP synthase; N-termina 99.9 1.2E-23 4.2E-28 188.2 17.7 166 11-192 261-431 (453)
16 2aee_A OPRT, oprtase, orotate 99.9 5.1E-23 1.7E-27 167.0 15.2 144 32-190 37-182 (211)
17 3n2l_A OPRT, oprtase, orotate 99.9 9.5E-23 3.3E-27 168.4 14.7 144 32-191 58-214 (238)
18 1lh0_A OMP synthase; loop clos 99.9 5.5E-23 1.9E-27 167.3 12.1 143 32-191 33-189 (213)
19 2ps1_A Orotate phosphoribosylt 99.9 2.5E-22 8.6E-27 164.7 14.7 144 32-191 37-201 (226)
20 3hvu_A Hypoxanthine phosphorib 99.8 2.2E-19 7.4E-24 145.3 12.0 134 23-165 17-157 (204)
21 1vdm_A Purine phosphoribosyltr 99.8 7.6E-19 2.6E-23 135.0 11.5 120 39-165 4-124 (153)
22 1fsg_A HGPRTASE, hypoxanthine- 99.8 9.9E-19 3.4E-23 144.0 10.2 143 23-165 32-183 (233)
23 1hgx_A HGXPRTASE, hypoxanthine 99.8 1.5E-18 5.3E-23 137.5 9.8 124 32-165 6-136 (183)
24 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 1.2E-18 4.2E-23 142.0 7.5 133 23-165 18-167 (217)
25 3ozf_A Hypoxanthine-guanine-xa 99.7 2.7E-18 9.2E-23 142.6 7.3 140 26-165 49-197 (250)
26 2jbh_A Phosphoribosyltransfera 99.7 1.1E-17 3.7E-22 137.0 9.7 131 25-165 28-175 (225)
27 2geb_A Hypoxanthine-guanine ph 99.7 1.7E-17 5.9E-22 131.8 10.0 121 36-165 12-139 (185)
28 3o7m_A Hypoxanthine phosphorib 99.7 2.7E-17 9.1E-22 131.2 11.1 123 34-165 6-135 (186)
29 1pzm_A HGPRT, hypoxanthine-gua 99.7 2.5E-17 8.6E-22 133.7 10.1 124 33-165 20-159 (211)
30 1tc1_A Protein (hypoxanthine p 99.7 7.5E-17 2.6E-21 131.7 11.9 123 34-165 5-144 (220)
31 1a3c_A PYRR, pyrimidine operon 99.7 3.1E-17 1.1E-21 129.5 9.2 125 36-164 3-139 (181)
32 3lrt_A Ribose-phosphate pyroph 99.7 2.2E-16 7.5E-21 133.6 14.2 103 56-172 148-251 (286)
33 1yfz_A Hypoxanthine-guanine ph 99.7 5.6E-17 1.9E-21 130.8 10.0 122 35-165 31-159 (205)
34 1nul_A XPRT, xanthine-guanine 99.7 8.3E-17 2.8E-21 124.2 9.4 119 39-176 5-125 (152)
35 1wd5_A Hypothetical protein TT 99.7 2.9E-16 9.8E-21 126.8 12.7 113 61-175 23-169 (208)
36 2ywu_A Hypoxanthine-guanine ph 99.7 4.1E-16 1.4E-20 123.8 12.0 117 39-164 12-135 (181)
37 1ufr_A TT1027, PYR mRNA-bindin 99.7 2.8E-16 9.5E-21 124.2 9.8 121 39-164 6-137 (181)
38 3ohp_A Hypoxanthine phosphorib 99.7 8.7E-16 3E-20 121.5 12.6 118 38-164 6-131 (177)
39 1u9y_A RPPK;, ribose-phosphate 99.6 1.2E-15 3.9E-20 129.1 11.1 111 52-175 145-256 (284)
40 3s5j_B Ribose-phosphate pyroph 99.6 3.1E-15 1E-19 128.5 13.3 120 38-174 144-263 (326)
41 2xbu_A Hypoxanthine-guanine ph 99.6 4.9E-15 1.7E-19 121.0 12.6 126 38-165 6-161 (221)
42 2ji4_A Phosphoribosyl pyrophos 99.6 6.1E-15 2.1E-19 129.2 11.6 133 38-174 172-322 (379)
43 1w30_A PYRR bifunctional prote 99.6 5.8E-15 2E-19 118.8 9.8 122 37-164 13-153 (201)
44 3dah_A Ribose-phosphate pyroph 99.6 1.1E-14 3.6E-19 124.9 10.6 101 61-174 166-266 (319)
45 1dku_A Protein (phosphoribosyl 99.6 2.3E-14 7.9E-19 122.8 12.3 102 60-174 166-267 (317)
46 3acd_A Hypoxanthine-guanine ph 99.5 3.3E-14 1.1E-18 112.8 10.8 119 38-164 11-135 (181)
47 1ecf_A Glutamine phosphoribosy 99.5 3.1E-14 1.1E-18 128.9 11.8 118 42-161 275-396 (504)
48 1ao0_A Glutamine phosphoribosy 99.5 9.1E-14 3.1E-18 124.4 9.4 145 45-191 258-423 (459)
49 1dqn_A Guanine phosphoribosylt 99.4 2.4E-13 8.3E-18 111.6 5.4 111 38-164 33-153 (230)
50 1i5e_A Uracil phosphoribosyltr 99.2 1.1E-10 3.8E-15 94.4 12.1 101 62-175 71-173 (209)
51 1o5o_A Uracil phosphoribosyltr 99.2 3.3E-10 1.1E-14 92.3 12.6 99 64-175 85-185 (221)
52 2ehj_A Uracil phosphoribosyltr 99.0 2.7E-09 9.3E-14 86.2 11.6 100 63-175 71-172 (208)
53 2e55_A Uracil phosphoribosyltr 99.0 2.3E-09 7.9E-14 86.6 11.1 99 63-175 70-170 (208)
54 1v9s_A Uracil phosphoribosyltr 98.9 2.7E-09 9.2E-14 86.2 7.8 100 63-175 71-172 (208)
55 1bd3_D Uprtase, uracil phospho 98.9 8.3E-09 2.8E-13 85.1 10.5 99 64-175 105-207 (243)
56 3dmp_A Uracil phosphoribosyltr 98.7 3.3E-08 1.1E-12 80.3 9.0 104 64-181 80-187 (217)
57 1xtt_A Probable uracil phospho 98.6 3.2E-07 1.1E-11 74.4 10.0 108 63-181 73-189 (216)
58 3dah_A Ribose-phosphate pyroph 78.4 19 0.00066 30.1 10.3 76 69-158 13-92 (319)
59 1u9y_A RPPK;, ribose-phosphate 75.1 20 0.00068 29.3 9.4 73 72-158 9-84 (284)
60 3s5j_B Ribose-phosphate pyroph 66.7 57 0.0019 27.3 10.5 74 71-158 11-88 (326)
61 3to5_A CHEY homolog; alpha(5)b 62.9 9.6 0.00033 27.4 4.4 30 123-155 11-40 (134)
62 1dku_A Protein (phosphoribosyl 55.7 87 0.003 25.9 10.9 76 69-158 15-94 (317)
63 3eod_A Protein HNR; response r 53.9 27 0.00091 23.4 5.4 30 122-154 5-34 (130)
64 3f6p_A Transcriptional regulat 51.6 30 0.001 23.0 5.3 27 125-154 3-29 (120)
65 3gl9_A Response regulator; bet 49.6 33 0.0011 22.9 5.3 27 125-154 3-29 (122)
66 3lkv_A Uncharacterized conserv 49.2 46 0.0016 26.7 6.8 118 33-157 45-175 (302)
67 3h5i_A Response regulator/sens 47.9 33 0.0011 23.4 5.1 29 123-154 4-32 (140)
68 2ji4_A Phosphoribosyl pyrophos 46.7 77 0.0026 27.0 8.1 72 73-158 39-117 (379)
69 3lrt_A Ribose-phosphate pyroph 45.0 52 0.0018 26.9 6.5 70 73-158 10-83 (286)
70 3mm4_A Histidine kinase homolo 44.3 36 0.0012 25.4 5.2 28 122-152 59-86 (206)
71 3lte_A Response regulator; str 44.2 42 0.0014 22.4 5.1 29 123-154 5-33 (132)
72 4ds3_A Phosphoribosylglycinami 42.9 40 0.0014 26.3 5.3 50 133-183 14-63 (209)
73 2j48_A Two-component sensor ki 42.8 51 0.0017 21.0 5.2 26 125-153 2-27 (119)
74 3t6k_A Response regulator rece 42.5 51 0.0018 22.4 5.4 27 124-153 4-30 (136)
75 2pln_A HP1043, response regula 42.4 50 0.0017 22.2 5.3 30 122-154 16-45 (137)
76 1dcf_A ETR1 protein; beta-alph 42.0 52 0.0018 22.1 5.4 29 123-154 6-34 (136)
77 3grc_A Sensor protein, kinase; 40.5 56 0.0019 22.0 5.4 28 123-153 5-32 (140)
78 4dad_A Putative pilus assembly 40.5 39 0.0013 23.1 4.5 31 122-155 18-49 (146)
79 5nul_A Flavodoxin; electron tr 40.5 55 0.0019 22.7 5.4 52 122-174 77-130 (138)
80 3p9x_A Phosphoribosylglycinami 40.4 40 0.0014 26.4 4.9 45 136-183 12-58 (211)
81 3hdv_A Response regulator; PSI 40.1 50 0.0017 22.2 5.0 29 123-154 6-34 (136)
82 1r6j_A Syntenin 1; PDZ, membra 39.2 37 0.0012 22.3 3.9 35 121-155 41-75 (82)
83 1tmy_A CHEY protein, TMY; chem 39.0 69 0.0024 20.8 5.5 28 124-154 2-29 (120)
84 1k68_A Phytochrome response re 38.9 57 0.002 21.7 5.2 26 124-152 2-27 (140)
85 2b4a_A BH3024; flavodoxin-like 38.9 63 0.0022 21.7 5.4 29 122-153 13-41 (138)
86 3tqr_A Phosphoribosylglycinami 38.2 59 0.002 25.4 5.6 46 135-183 14-60 (215)
87 3kcq_A Phosphoribosylglycinami 37.4 41 0.0014 26.4 4.6 49 134-183 16-64 (215)
88 1mb3_A Cell division response 36.5 72 0.0024 20.8 5.3 11 125-135 2-12 (124)
89 3m6m_D Sensory/regulatory prot 36.3 51 0.0017 22.7 4.6 30 122-154 12-41 (143)
90 3gt7_A Sensor protein; structu 36.2 62 0.0021 22.5 5.1 28 123-153 6-33 (154)
91 3i42_A Response regulator rece 35.9 50 0.0017 21.8 4.4 25 125-152 4-28 (127)
92 3h1g_A Chemotaxis protein CHEY 35.7 45 0.0015 22.3 4.1 27 124-153 5-31 (129)
93 2rdm_A Response regulator rece 35.4 76 0.0026 20.9 5.3 28 123-153 4-31 (132)
94 3hv2_A Response regulator/HD d 34.5 63 0.0021 22.3 4.9 29 122-153 12-40 (153)
95 1mvo_A PHOP response regulator 33.6 82 0.0028 20.9 5.3 27 124-153 3-29 (136)
96 2ayx_A Sensor kinase protein R 33.4 32 0.0011 26.8 3.4 31 122-155 9-39 (254)
97 2rjn_A Response regulator rece 33.3 77 0.0026 21.8 5.2 28 123-153 6-33 (154)
98 3cg0_A Response regulator rece 33.2 90 0.0031 20.8 5.4 30 123-155 8-37 (140)
99 3kto_A Response regulator rece 33.2 62 0.0021 21.8 4.6 29 124-155 6-34 (136)
100 3lua_A Response regulator rece 33.0 90 0.0031 20.9 5.4 30 123-155 3-33 (140)
101 3cg4_A Response regulator rece 32.9 90 0.0031 20.9 5.4 28 123-153 6-33 (142)
102 3eul_A Possible nitrate/nitrit 32.7 57 0.002 22.4 4.4 28 122-152 13-40 (152)
103 3uw1_A Ribose-5-phosphate isom 32.7 26 0.00088 28.2 2.6 46 134-184 38-83 (239)
104 1o63_A ATP phosphoribosyltrans 32.6 12 0.00041 29.8 0.6 12 131-142 147-158 (219)
105 4gmk_A Ribose-5-phosphate isom 32.5 49 0.0017 26.4 4.2 46 134-185 27-76 (228)
106 1ve4_A ATP phosphoribosyltrans 32.0 12 0.00042 29.4 0.6 11 132-142 153-163 (206)
107 3ia7_A CALG4; glycosysltransfe 32.0 1.2E+02 0.0042 24.4 7.0 41 50-91 91-131 (402)
108 2ywr_A Phosphoribosylglycinami 31.8 88 0.003 24.2 5.6 47 135-182 10-56 (216)
109 3av3_A Phosphoribosylglycinami 31.8 1.1E+02 0.0037 23.7 6.2 46 134-182 11-58 (212)
110 3f6c_A Positive transcription 31.5 73 0.0025 21.1 4.7 26 126-154 3-28 (134)
111 2qxy_A Response regulator; reg 31.4 92 0.0032 20.9 5.3 27 124-153 4-30 (142)
112 3kwm_A Ribose-5-phosphate isom 31.4 49 0.0017 26.2 4.1 54 122-184 24-77 (224)
113 3hzh_A Chemotaxis response reg 31.2 87 0.003 21.7 5.2 30 123-155 35-64 (157)
114 3rsc_A CALG2; TDP, enediyne, s 30.9 1.2E+02 0.0042 24.7 6.8 41 50-91 107-147 (415)
115 3hix_A ALR3790 protein; rhodan 30.5 57 0.002 21.8 3.9 31 122-155 50-80 (106)
116 1dbw_A Transcriptional regulat 30.4 1.2E+02 0.0039 19.9 5.6 27 124-153 3-29 (126)
117 3gge_A PDZ domain-containing p 30.4 68 0.0023 21.8 4.2 42 120-161 46-87 (95)
118 1z7m_E ATP phosphoribosyltrans 30.3 11 0.00038 29.7 0.1 18 132-156 155-172 (208)
119 3foj_A Uncharacterized protein 30.2 1.1E+02 0.0039 19.8 5.4 29 121-152 53-81 (100)
120 3rqi_A Response regulator prot 30.2 90 0.0031 22.5 5.3 28 123-153 6-33 (184)
121 3kyj_B CHEY6 protein, putative 30.1 61 0.0021 22.1 4.1 26 122-150 11-36 (145)
122 1qkk_A DCTD, C4-dicarboxylate 29.9 92 0.0031 21.4 5.1 28 124-154 3-30 (155)
123 3tum_A Shikimate dehydrogenase 29.9 68 0.0023 25.9 4.8 37 122-165 123-159 (269)
124 3ilm_A ALR3790 protein; rhodan 29.3 63 0.0022 23.0 4.1 32 121-155 53-84 (141)
125 2jtq_A Phage shock protein E; 29.1 85 0.0029 19.7 4.4 32 122-156 39-70 (85)
126 3l7o_A Ribose-5-phosphate isom 28.8 42 0.0014 26.6 3.3 44 135-184 25-72 (225)
127 1meo_A Phosophoribosylglycinam 28.6 65 0.0022 25.0 4.3 45 135-182 9-55 (209)
128 3snk_A Response regulator CHEY 28.5 76 0.0026 21.2 4.4 29 123-154 13-42 (135)
129 1jkx_A GART;, phosphoribosylgl 27.1 78 0.0027 24.6 4.6 46 135-183 9-56 (212)
130 2r25_B Osmosensing histidine p 27.1 85 0.0029 21.1 4.4 12 125-136 3-14 (133)
131 2fz5_A Flavodoxin; alpha/beta 26.9 1.5E+02 0.0051 20.0 6.3 43 122-164 78-121 (137)
132 2gkg_A Response regulator homo 26.8 1.1E+02 0.0038 19.7 4.9 26 125-153 6-31 (127)
133 4hwg_A UDP-N-acetylglucosamine 26.8 91 0.0031 26.2 5.3 47 44-90 77-123 (385)
134 3a10_A Response regulator; pho 26.5 1.3E+02 0.0044 19.2 5.1 25 126-153 3-27 (116)
135 2qr3_A Two-component system re 26.3 1.1E+02 0.0037 20.3 4.9 8 125-132 4-11 (140)
136 1qo0_D AMIR; binding protein, 25.9 82 0.0028 22.8 4.4 31 123-156 11-41 (196)
137 3jte_A Response regulator rece 25.6 1.3E+02 0.0046 20.0 5.3 25 125-152 4-28 (143)
138 2vd3_A ATP phosphoribosyltrans 25.4 20 0.00067 29.8 0.7 11 132-142 160-170 (289)
139 2a9o_A Response regulator; ess 25.4 1.4E+02 0.0047 19.1 5.1 25 126-153 3-27 (120)
140 3g5j_A Putative ATP/GTP bindin 25.4 64 0.0022 22.0 3.5 29 122-152 86-115 (134)
141 3cnb_A DNA-binding response re 25.0 1.3E+02 0.0044 20.0 5.0 28 123-153 7-35 (143)
142 2jba_A Phosphate regulon trans 25.0 1.4E+02 0.0049 19.2 5.3 26 125-153 3-28 (127)
143 3t4e_A Quinate/shikimate dehyd 24.7 92 0.0032 25.7 4.8 36 122-164 146-181 (312)
144 1h3d_A ATP-phosphoribosyltrans 24.6 20 0.00067 29.9 0.6 11 132-142 169-179 (299)
145 3gk5_A Uncharacterized rhodane 24.3 98 0.0033 20.6 4.2 29 121-152 52-80 (108)
146 2iya_A OLEI, oleandomycin glyc 24.2 1.7E+02 0.0058 24.1 6.5 39 51-91 99-137 (424)
147 3kht_A Response regulator; PSI 24.1 1E+02 0.0036 20.7 4.4 28 123-153 4-31 (144)
148 1srr_A SPO0F, sporulation resp 23.9 1.5E+02 0.005 19.2 5.1 9 125-133 4-12 (124)
149 1nh8_A ATP phosphoribosyltrans 23.5 21 0.00073 29.8 0.6 12 131-142 173-184 (304)
150 3auf_A Glycinamide ribonucleot 23.4 1.3E+02 0.0046 23.5 5.3 53 125-182 23-77 (229)
151 2iyf_A OLED, oleandomycin glyc 23.3 2.1E+02 0.0072 23.4 6.9 40 50-91 93-132 (430)
152 3c3m_A Response regulator rece 23.1 1.5E+02 0.0052 19.8 5.1 11 125-135 4-14 (138)
153 1k66_A Phytochrome response re 22.9 1.1E+02 0.0038 20.4 4.4 27 123-152 5-31 (149)
154 1s8n_A Putative antiterminator 22.9 1.6E+02 0.0054 21.4 5.5 29 124-155 13-41 (205)
155 3iwh_A Rhodanese-like domain p 22.7 1.4E+02 0.0048 19.9 4.7 32 121-155 53-84 (103)
156 3n0r_A Response regulator; sig 22.5 1.4E+02 0.0049 23.7 5.5 30 123-155 159-188 (286)
157 2pl1_A Transcriptional regulat 22.5 1.6E+02 0.0054 18.9 5.0 8 126-133 2-9 (121)
158 3dfz_A SIRC, precorrin-2 dehyd 22.4 94 0.0032 24.4 4.2 30 122-155 29-58 (223)
159 3s81_A Putative aspartate race 22.2 68 0.0023 25.8 3.4 48 135-185 83-130 (268)
160 3otg_A CALG1; calicheamicin, T 22.0 1.2E+02 0.0039 24.8 5.0 38 51-90 120-157 (412)
161 1yio_A Response regulatory pro 21.8 1.5E+02 0.0053 21.4 5.3 27 124-153 4-30 (208)
162 1gmx_A GLPE protein; transfera 21.8 74 0.0025 21.1 3.1 31 122-155 56-86 (108)
163 3e17_A Tight junction protein 21.7 1.3E+02 0.0043 19.3 4.2 34 121-154 40-73 (88)
164 3gd5_A Otcase, ornithine carba 21.6 1.7E+02 0.0057 24.4 5.8 82 62-155 104-185 (323)
165 3crn_A Response regulator rece 21.5 1.8E+02 0.0062 19.1 5.3 26 125-153 4-29 (132)
166 3heb_A Response regulator rece 21.5 1.5E+02 0.005 20.2 4.8 26 124-152 4-29 (152)
167 3ilh_A Two component response 21.4 1.2E+02 0.0041 20.2 4.2 27 123-152 8-34 (146)
168 1zgz_A Torcad operon transcrip 21.2 1.7E+02 0.0059 18.7 5.3 11 126-136 4-14 (122)
169 3eqz_A Response regulator; str 21.1 1.4E+02 0.0046 19.6 4.5 25 124-151 3-27 (135)
170 1wi4_A Synip, syntaxin binding 20.9 1E+02 0.0036 20.7 3.8 31 121-151 60-90 (109)
171 2qv0_A Protein MRKE; structura 20.8 1.8E+02 0.0062 19.3 5.2 29 123-154 8-37 (143)
172 1jbe_A Chemotaxis protein CHEY 20.0 1.4E+02 0.0049 19.3 4.4 12 124-135 4-15 (128)
No 1
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=100.00 E-value=5.9e-33 Score=222.23 Aligned_cols=178 Identities=47% Similarity=0.840 Sum_probs=155.7
Q ss_pred CCchHHHHHhccccccCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCE
Q 029141 8 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF 87 (198)
Q Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~ 87 (198)
....+|+.|++.++..|+||.+|+.|+|+.+++.++++++.+++.+++++.+.++|+|+|++.||+++|..+|+.+++|+
T Consensus 10 ~~~~~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~ 89 (190)
T 2dy0_A 10 ATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGF 89 (190)
T ss_dssp CCHHHHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEE
T ss_pred ccHHHHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCE
Confidence 34456888999999999999999999999999999999999999999998766789999999999999999999999999
Q ss_pred EEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCch
Q 029141 88 VPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK 167 (198)
Q Consensus 88 ~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~ 167 (198)
...||+++.++...+..++.+++.+.+++..+...+|++||||||++|||+|+.+|+++|+++|++++.+++++++++.+
T Consensus 90 ~~~rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~ 169 (190)
T 2dy0_A 90 VPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLG 169 (190)
T ss_dssp EEEBSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGC
T ss_pred EEEEecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcc
Confidence 88887766555555555555555556766545557999999999999999999999999999999999999999998878
Q ss_pred HHHHhhhcCCCCeeehHHH
Q 029141 168 VCLKVQKVIWCPNYIYIYI 186 (198)
Q Consensus 168 ~~~~l~~~~~~~~~~~~~~ 186 (198)
+++++.+. ++|++|++++
T Consensus 170 ~~~~l~~~-g~~v~sl~~~ 187 (190)
T 2dy0_A 170 GEQRLEKQ-GITSYSLVPF 187 (190)
T ss_dssp HHHHHHTT-TCEEEEEEEE
T ss_pred hHHHHhhC-CCcEEEEEEe
Confidence 99999875 8999998764
No 2
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=100.00 E-value=3.1e-32 Score=217.53 Aligned_cols=175 Identities=37% Similarity=0.662 Sum_probs=149.8
Q ss_pred chHHHHHhccccccCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCcchHhHHHHHHHhCC
Q 029141 10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIGA 85 (198)
Q Consensus 10 ~~~~~~l~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~----~~~d~Iv~v~~gG~~~A~~la~~L~~ 85 (198)
++++++|++.+|..|+||.+|+.|+|+..++.+++.++.+++.|++++.+ .++|+|+|++.||+++|..+|+.+++
T Consensus 4 ~~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (187)
T 1g2q_A 4 ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83 (187)
T ss_dssp HHHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCC
Confidence 46788999999999999999999999999999999999999999998865 56899999999999999999999999
Q ss_pred CEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 86 KFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 86 p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
|+...||.++.++...+.+++.+++.+.+++..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++
T Consensus 84 p~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 163 (187)
T 1g2q_A 84 GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF 163 (187)
T ss_dssp EEEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CEEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 99888876655555555555555555667666555579999999999999999999999999999999999999999987
Q ss_pred chHHHHhhhcCCCCeeehHHHHH
Q 029141 166 LKVCLKVQKVIWCPNYIYIYICT 188 (198)
Q Consensus 166 ~~~~~~l~~~~~~~~~~~~~~~~ 188 (198)
.+|++++ ++|++|++++..
T Consensus 164 ~~g~~~l----~~~~~sl~~~~~ 182 (187)
T 1g2q_A 164 LKGRSKL----NAPVFTLLNAQK 182 (187)
T ss_dssp SSCCCCC----SSCEEECC----
T ss_pred cCchhhc----CccEEEEEEech
Confidence 7787766 799999988754
No 3
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=100.00 E-value=6.6e-32 Score=223.29 Aligned_cols=182 Identities=30% Similarity=0.497 Sum_probs=158.1
Q ss_pred CCchHHHHHhcccccc-CCCCCCCc-eeeecHHHhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCcchHhHHHHHHHh
Q 029141 8 AQDPRIAGISSAIRVI-PDFPKPGI-MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAI 83 (198)
Q Consensus 8 ~~~~~~~~l~~~~~~~-~~~~~~g~-~~~d~~~~~~~~~~~~~i~~~La~~l~~~--~~d~Iv~v~~gG~~~A~~la~~L 83 (198)
..+++.++|++.+|+. |+||.+|+ .|+|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.||+++|..+|+.+
T Consensus 14 ~~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L 93 (236)
T 1qb7_A 14 DSHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVEL 93 (236)
T ss_dssp TTSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHH
T ss_pred cChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHh
Confidence 4678899999999999 99999999 99999999999999999999999988764 78999999999999999999999
Q ss_pred CCCEEEEEcccCCCCcee-eeeeeecc---ccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEE
Q 029141 84 GAKFVPMRKPKKLPGEVI-SEEYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECAC 159 (198)
Q Consensus 84 ~~p~~~~rk~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~ 159 (198)
++|+++.||.++.++.+. +.+|..++ +.+.+++..+...+|++||||||++|||+|+.+++++|+++|++++++++
T Consensus 94 ~~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~ 173 (236)
T 1qb7_A 94 EIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVS 173 (236)
T ss_dssp TCCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEE
Confidence 999998888766555544 44454444 44456666555579999999999999999999999999999999999999
Q ss_pred EEecCCchHHHHhhh-----cCCCCeeehHHHHHH
Q 029141 160 VIELPELKVCLKVQK-----VIWCPNYIYIYICTL 189 (198)
Q Consensus 160 i~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~ 189 (198)
++++.+.+|++++.+ ..++|++|++.+.++
T Consensus 174 l~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~ 208 (236)
T 1qb7_A 174 ILSIPFLKAAEKIHSTANSRYKDIKFISLLSDDAL 208 (236)
T ss_dssp EEECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGC
T ss_pred EEEcccccHHHHHhhhcccccCCCcEEEEEEcccc
Confidence 999988889999975 247999999987763
No 4
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.98 E-value=9.7e-32 Score=213.14 Aligned_cols=174 Identities=41% Similarity=0.741 Sum_probs=149.3
Q ss_pred chHHHHHhccccccCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcCC---CccEEEeeCCcchHhHHHHHHHhCCC
Q 029141 10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK---NISVVAGIEARGFIFGPPIALAIGAK 86 (198)
Q Consensus 10 ~~~~~~l~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~~---~~d~Iv~v~~gG~~~A~~la~~L~~p 86 (198)
++.|+.|++.+|..|+||.+|..|.|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.||+++|..+|+.+++|
T Consensus 3 ~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p 82 (180)
T 1zn8_A 3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82 (180)
T ss_dssp CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred hHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCC
Confidence 366889999999999999999999999999999999999999999887642 38999999999999999999999999
Q ss_pred EEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCc
Q 029141 87 FVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL 166 (198)
Q Consensus 87 ~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~ 166 (198)
+...|++++.++...+..++.+++.+.+++..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++.
T Consensus 83 ~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 162 (180)
T 1zn8_A 83 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL 162 (180)
T ss_dssp EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Confidence 98877765545545555555445555666654445799999999999999999999999999999999999999999877
Q ss_pred hHHHHhhhcCCCCeeehHHH
Q 029141 167 KVCLKVQKVIWCPNYIYIYI 186 (198)
Q Consensus 167 ~~~~~l~~~~~~~~~~~~~~ 186 (198)
+|++++. ++|++|++++
T Consensus 163 ~~~~~l~---~~~~~sl~~~ 179 (180)
T 1zn8_A 163 KGREKLA---PVPFFSLLQY 179 (180)
T ss_dssp CHHHHHT---TSCEEEEEEE
T ss_pred chhhhhc---CCceEEEEec
Confidence 8888886 6899988653
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.98 E-value=4.1e-31 Score=210.94 Aligned_cols=173 Identities=36% Similarity=0.557 Sum_probs=147.3
Q ss_pred chHHHHHhccccccCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEE
Q 029141 10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP 89 (198)
Q Consensus 10 ~~~~~~l~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~ 89 (198)
.++.+.|++.++.+|+||.+|..|.|+..++.++++++.+++.+++.+...++|+|+|++.||+++|..+|+.+++|+..
T Consensus 2 ~~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~ 81 (186)
T 1l1q_A 2 TMSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA 81 (186)
T ss_dssp CCCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEE
T ss_pred chhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEE
Confidence 35677899999999999999999999999999999999999999998876678999999999999999999999999988
Q ss_pred EEcccCCCCceeeeeeeeccccc-eEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCe--EEEEEEEEecCCc
Q 029141 90 MRKPKKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVH--VVECACVIELPEL 166 (198)
Q Consensus 90 ~rk~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~--~v~~~~i~~~~~~ 166 (198)
.||+++.++.+.+.+++.+++.. .+++..+...+|++||||||++|||+|+.+|++.|+++|++ ++.+++++++++.
T Consensus 82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~ 161 (186)
T 1l1q_A 82 LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEAL 161 (186)
T ss_dssp EEETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGG
T ss_pred EEecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCc
Confidence 88776655555444554333333 46655454569999999999999999999999999999999 9999999999877
Q ss_pred hHHHHhhhcCCCCeeeh
Q 029141 167 KVCLKVQKVIWCPNYIY 183 (198)
Q Consensus 167 ~~~~~l~~~~~~~~~~~ 183 (198)
+|++++.++ +++..+.
T Consensus 162 ~g~~~l~~~-~~~~~~~ 177 (186)
T 1l1q_A 162 KGREKVGQK-CTRLFSV 177 (186)
T ss_dssp CHHHHHTTT-CCCEEEE
T ss_pred cHHHHHhhc-Ccceehh
Confidence 899999876 6665544
No 6
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.94 E-value=7.3e-26 Score=186.78 Aligned_cols=152 Identities=19% Similarity=0.273 Sum_probs=124.1
Q ss_pred CC-CCCc---eeeecHHHhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCc
Q 029141 26 FP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGE 99 (198)
Q Consensus 26 ~~-~~g~---~~~d~~~~~~~~~~~~~i~~~La~~l~~~--~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~ 99 (198)
|. .+|. .|+|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.||+++|..+|+.+++|+++.||+.+..+.
T Consensus 47 F~l~SG~~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~ 126 (234)
T 3m3h_A 47 FTWSSGMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGK 126 (234)
T ss_dssp EECTTSCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC--------
T ss_pred EEcCcCCcCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCc
Confidence 44 4554 78999999999999999999999988753 789999999999999999999999999998876542221
Q ss_pred eeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCC
Q 029141 100 VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCP 179 (198)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~ 179 (198)
. ..+ .+...+|++||||||++|||+|+.+++++|+++|++++++++++++.+.++++++.+. ++|
T Consensus 127 ~-----------~~i---~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~-gi~ 191 (234)
T 3m3h_A 127 G-----------NQI---EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAA-NVA 191 (234)
T ss_dssp ------------CCE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHT-TCC
T ss_pred c-----------eEE---ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhc-CCC
Confidence 0 111 2445799999999999999999999999999999999999999999877889999886 999
Q ss_pred eeehHHHHHHHHH
Q 029141 180 NYIYIYICTLLFV 192 (198)
Q Consensus 180 ~~~~~~~~~~~~~ 192 (198)
++|++++.+|+=.
T Consensus 192 v~sL~~~~dl~~~ 204 (234)
T 3m3h_A 192 SYSLSDYSALTEV 204 (234)
T ss_dssp EEESSCHHHHHHH
T ss_pred EEEEeeHHHHHHH
Confidence 9999999988644
No 7
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.93 E-value=3e-25 Score=178.03 Aligned_cols=172 Identities=19% Similarity=0.235 Sum_probs=131.7
Q ss_pred HHHHHhccccccCCCCCCCceeee-cHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEE
Q 029141 12 RIAGISSAIRVIPDFPKPGIMFQD-ITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (198)
Q Consensus 12 ~~~~l~~~~~~~~~~~~~g~~~~d-~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~ 90 (198)
.+++|.+.-+..+| +++|.| ..+...+|+.++.+++.|++.+.+.++|+|+|++.||+++|..+|+.+++|+...
T Consensus 7 l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~ 82 (197)
T 1y0b_A 7 LKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFA 82 (197)
T ss_dssp HHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEE
Confidence 44455555455555 555433 2335589999999999999998766789999999999999999999999999887
Q ss_pred EcccCCC--Cceeee-eeeeccc-cceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCc
Q 029141 91 RKPKKLP--GEVISE-EYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL 166 (198)
Q Consensus 91 rk~~~~~--~~~~~~-~~~~~~~-~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~ 166 (198)
||+++.+ +.+... .+....+ ...+++..+...+|++||||||++|||+|+.+|+++|+++|++++.+++++++++.
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 162 (197)
T 1y0b_A 83 RKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQ 162 (197)
T ss_dssp BSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTS
T ss_pred EecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEeccc
Confidence 7765433 333222 2221222 23355543444699999999999999999999999999999999999999999888
Q ss_pred hHHHHhhhcCCCCeeehHHHHH
Q 029141 167 KVCLKVQKVIWCPNYIYIYICT 188 (198)
Q Consensus 167 ~~~~~l~~~~~~~~~~~~~~~~ 188 (198)
+++++|.+. ++|+++++.+.+
T Consensus 163 ~~~~~l~~~-~~~~~sl~~~~~ 183 (197)
T 1y0b_A 163 PGRDELVKL-GYRVESLARIQS 183 (197)
T ss_dssp THHHHHHHT-TCCEEEEEEEEE
T ss_pred chhhhHHhc-CCcEEEEEEEEE
Confidence 899999885 899999876544
No 8
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.93 E-value=2.9e-25 Score=184.11 Aligned_cols=147 Identities=22% Similarity=0.302 Sum_probs=127.3
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeecc
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~~--~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~ 109 (198)
.|+|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.+|+++|..+|+.+++|+++.||+.+..+..
T Consensus 69 ~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~--------- 139 (243)
T 3dez_A 69 IYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAG--------- 139 (243)
T ss_dssp EEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC--------------
T ss_pred EEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCce---------
Confidence 68999999999999999999999988753 7999999999999999999999999999998865532211
Q ss_pred ccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehHHHHHH
Q 029141 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYIYICTL 189 (198)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 189 (198)
..+ .+...+|++||||||++|||+|+.+++++|+++|++++++++++++.+.++++++.+. ++|++|++++.+|
T Consensus 140 --~~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~-gi~~~sL~~~~dl 213 (243)
T 3dez_A 140 --NQI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKA-SVKLVTLSNYSEL 213 (243)
T ss_dssp --CCE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHH-TCCEEESSCHHHH
T ss_pred --eEE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhc-CCCEEEEeeHHHH
Confidence 011 2445799999999999999999999999999999999999999999877889999886 9999999999998
Q ss_pred HHHH
Q 029141 190 LFVM 193 (198)
Q Consensus 190 ~~~~ 193 (198)
+=..
T Consensus 214 ~~~~ 217 (243)
T 3dez_A 214 IKVA 217 (243)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7443
No 9
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.92 E-value=2.4e-24 Score=174.32 Aligned_cols=146 Identities=16% Similarity=0.303 Sum_probs=124.0
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeecc
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~--~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~ 109 (198)
.|+|+..++.+|+.++.+++.+++.+.+ .++|+|+|++.+|+++|..+|..+++|+.+.||..+. +
T Consensus 31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~------------~ 98 (205)
T 2wns_A 31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKD------------Y 98 (205)
T ss_dssp EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTT------------S
T ss_pred EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCc------------c
Confidence 6889999999999999999999998864 5789999999999999999999999999887664431 1
Q ss_pred ccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehHHHHHH
Q 029141 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYIYICTL 189 (198)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 189 (198)
+.... ..+...+|++||||||++|||+|+.++++.|+++|+++++++++++++ .++++++.+. ++|++|++++.++
T Consensus 99 g~~~~--~~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~-~~~~~~l~~~-g~~v~sl~~~~~~ 174 (205)
T 2wns_A 99 GTKRL--VEGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE-QGGKDKLQAH-GIRLHSVCTLSKM 174 (205)
T ss_dssp SSCCS--EESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC-SSHHHHHHTT-TCEEEEEEEHHHH
T ss_pred Ccccc--ccCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC-cchHHHHHHc-CCeEEEEEEHHHH
Confidence 11110 124446999999999999999999999999999999999999999995 5888898876 8999999999888
Q ss_pred HHHH
Q 029141 190 LFVM 193 (198)
Q Consensus 190 ~~~~ 193 (198)
.-..
T Consensus 175 ~~~~ 178 (205)
T 2wns_A 175 LEIL 178 (205)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 10
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.92 E-value=4.4e-25 Score=173.76 Aligned_cols=159 Identities=19% Similarity=0.224 Sum_probs=124.7
Q ss_pred HHhccccccCCCCCC-CceeeecHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcc
Q 029141 15 GISSAIRVIPDFPKP-GIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKP 93 (198)
Q Consensus 15 ~l~~~~~~~~~~~~~-g~~~~d~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~ 93 (198)
+++..++.+|+|+.+ |. |++...+..+++..+.+++.+++.+.+ ++|+|+|++.||+++|..+|+.+++|+...+|+
T Consensus 7 ~~~~~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~ 84 (175)
T 1vch_A 7 TVGGVTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRR 84 (175)
T ss_dssp EETTEEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSS
T ss_pred EecceeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEec
Confidence 578899999999976 64 689999999999999999999988865 789999999999999999999999999887775
Q ss_pred cCC--CCceeeeeeeeccc-cceEEEEeccc--CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchH
Q 029141 94 KKL--PGEVISEEYSLEYG-KDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKV 168 (198)
Q Consensus 94 ~~~--~~~~~~~~~~~~~~-~~~~~l~~~~~--~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~ 168 (198)
.+. ........+..+.+ .+.+.+..+.. ++|++||||||++|||+|+.+|++.|+++|++++.++++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~-- 162 (175)
T 1vch_A 85 RRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP-- 162 (175)
T ss_dssp CCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC--
T ss_pred CCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC--
Confidence 542 11111111111111 12344433222 489999999999999999999999999999999999999998742
Q ss_pred HHHhhhcCCCCeeehHH
Q 029141 169 CLKVQKVIWCPNYIYIY 185 (198)
Q Consensus 169 ~~~l~~~~~~~~~~~~~ 185 (198)
+.|++|+..
T Consensus 163 --------~~~~~sl~~ 171 (175)
T 1vch_A 163 --------GLAVDTVAE 171 (175)
T ss_dssp --------SSCCEEEEE
T ss_pred --------CcceEEEEe
Confidence 677777654
No 11
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.92 E-value=1.1e-24 Score=172.93 Aligned_cols=142 Identities=21% Similarity=0.229 Sum_probs=117.6
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCE--EEEEcccCCCCceeeeeeeecc
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEY 109 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~--~~~rk~~~~~~~~~~~~~~~~~ 109 (198)
.|+|+..++.+|+..+.+++.|++++.+.++|+|+|++.+|+++|..+|+.++.|+ .+.||+.+..
T Consensus 34 ~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~~------------ 101 (180)
T 2p1z_A 34 YYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKKH------------ 101 (180)
T ss_dssp -CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-C------------
T ss_pred EEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEeccccc------------
Confidence 68999999999999999999999988766899999999999999999999998764 5555543210
Q ss_pred ccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehHHHHHH
Q 029141 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYIYICTL 189 (198)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 189 (198)
+... . ..+...+|++|+||||++|||+|+.++++.|+++|++++.+++++++++ +|++.+.+. ++|++|++++.++
T Consensus 102 g~~~-~-~~g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~-~g~~~l~~~-g~~~~sl~~~~~l 177 (180)
T 2p1z_A 102 GMQR-R-IEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRAT-GAADVIAAE-GLEYRYILGLEDL 177 (180)
T ss_dssp C-CC-S-EESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CC-CHHHHHHTT-TCCEEEEECSTTT
T ss_pred cchh-h-ccCCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-chHHHHHhc-CCeEEEEEEHHHh
Confidence 1110 0 1133479999999999999999999999999999999999999999985 888888775 8999999988765
No 12
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.92 E-value=2.6e-24 Score=170.46 Aligned_cols=144 Identities=22% Similarity=0.290 Sum_probs=121.9
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHh-cCC-CccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeecc
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERY-KDK-NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l-~~~-~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~ 109 (198)
.|+|+..++.+|+..+.+++.+++.+ .+. ++|+|+|++.||+++|..+|+.+++|+.+.||+.+..
T Consensus 27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~~------------ 94 (178)
T 2yzk_A 27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKGH------------ 94 (178)
T ss_dssp EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTS------------
T ss_pred eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEcccccc------------
Confidence 58999999999999999999999888 543 6899999999999999999999999998877654310
Q ss_pred ccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehHHHHHH
Q 029141 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYIYICTL 189 (198)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 189 (198)
+.... + .+. ++|++||||||++|||+|+.++++.|+++|++++.++++++++. ++++++.+. ++|++|++++.++
T Consensus 95 g~~~~-i-~~~-~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-~~~~~l~~~-g~~~~sl~~~~~~ 169 (178)
T 2yzk_A 95 GTLSQ-V-EGD-PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-GAGELLARM-GVRLVSVATLKTI 169 (178)
T ss_dssp CCCCC-C-BTC-CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-SHHHHHHTT-TCEEEEEEEHHHH
T ss_pred Cccce-e-ccc-CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-CHHHHHHHc-CCcEEEEeeHHHH
Confidence 11100 1 123 59999999999999999999999999999999999999999975 888999775 8999999999988
Q ss_pred HHH
Q 029141 190 LFV 192 (198)
Q Consensus 190 ~~~ 192 (198)
+=.
T Consensus 170 ~~~ 172 (178)
T 2yzk_A 170 LEK 172 (178)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 13
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.92 E-value=3.6e-24 Score=181.92 Aligned_cols=164 Identities=20% Similarity=0.356 Sum_probs=126.0
Q ss_pred HHHHHhccccccCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEE
Q 029141 12 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (198)
Q Consensus 12 ~~~~l~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~r 91 (198)
.+++|.+.-+.+|| + |.+++.++.+|++++.+++.+++.+.+.++|+|+|++.||+++|..+|+.+++|+++.|
T Consensus 87 l~~~l~~~~~v~~G----~--f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~r 160 (291)
T 1o57_A 87 LGQSLANPERILPG----G--YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVR 160 (291)
T ss_dssp HHHHHTCGGGEETT----T--EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHCCCcccC----C--eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEE
Confidence 44555555555555 5 55688899999999999999999987767999999999999999999999999998888
Q ss_pred cccCC-CCceeeeeeeecc--ccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchH
Q 029141 92 KPKKL-PGEVISEEYSLEY--GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKV 168 (198)
Q Consensus 92 k~~~~-~~~~~~~~~~~~~--~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~ 168 (198)
|+.+. ++.+.+..|.... ..+.+.+......+|++||||||++|||+|+.+|+++|+++||+++++++++++++.
T Consensus 161 k~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~-- 238 (291)
T 1o57_A 161 KDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGV-- 238 (291)
T ss_dssp CC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSC--
T ss_pred EeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcc--
Confidence 76543 3444444442211 113455554455799999999999999999999999999999999999999999853
Q ss_pred HHHhhhcCCCCeeehHHHH
Q 029141 169 CLKVQKVIWCPNYIYIYIC 187 (198)
Q Consensus 169 ~~~l~~~~~~~~~~~~~~~ 187 (198)
++. .+.|++|++.+.
T Consensus 239 ~~~----l~~~~~SL~~~~ 253 (291)
T 1o57_A 239 DER----LVDEYMSLLTLS 253 (291)
T ss_dssp TTS----CCSCCEEEEEEE
T ss_pred ccc----cCCceEEEEEEc
Confidence 322 257888887653
No 14
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.91 E-value=7.4e-24 Score=174.55 Aligned_cols=143 Identities=17% Similarity=0.232 Sum_probs=117.4
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCcchHhHHHHHHHh------CCCEEEEEcccCCCCceeee
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 103 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~--~~~d~Iv~v~~gG~~~A~~la~~L------~~p~~~~rk~~~~~~~~~~~ 103 (198)
.|+|+. ++.+|+.++.+++.+++.+.+ .++|+|+|++.+|+++|..+|..| ++|+++.||+.+..+.
T Consensus 51 ~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~~g~---- 125 (232)
T 3mjd_A 51 YFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHGE---- 125 (232)
T ss_dssp EEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC----------
T ss_pred eEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeecccCCC----
Confidence 688984 678999999999999999875 369999999999999999999997 8999998886542111
Q ss_pred eeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHH--------HHhhhc
Q 029141 104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVC--------LKVQKV 175 (198)
Q Consensus 104 ~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~--------~~l~~~ 175 (198)
...+ .+..++|++||||||++|||+|+.+++++|+++|++++++++++++++ +|+ +.+.+.
T Consensus 126 -------~~~i---~g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e-~g~~~~~~a~~~~~~~~ 194 (232)
T 3mjd_A 126 -------GGVF---VGADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE-KAKDSDISATKKISQDF 194 (232)
T ss_dssp --------CCE---EESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB-CCTTSSSCHHHHHHHHH
T ss_pred -------CceE---eccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc-CCccccchhHHHHHHHc
Confidence 0111 133469999999999999999999999999999999999999999974 555 555565
Q ss_pred CCCCeeehHHHHHHHH
Q 029141 176 IWCPNYIYIYICTLLF 191 (198)
Q Consensus 176 ~~~~~~~~~~~~~~~~ 191 (198)
++|++|++++.+++-
T Consensus 195 -gv~v~sL~~~~~l~~ 209 (232)
T 3mjd_A 195 -NIPVLAVTNFESIFE 209 (232)
T ss_dssp -CCCEEEEEEHHHHHH
T ss_pred -CCcEEEEEeHHHHHH
Confidence 999999999987754
No 15
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.91 E-value=1.2e-23 Score=188.21 Aligned_cols=166 Identities=20% Similarity=0.309 Sum_probs=135.3
Q ss_pred hHHHHHhccccc-cCCCC-CCCc---eeeecHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCC
Q 029141 11 PRIAGISSAIRV-IPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGA 85 (198)
Q Consensus 11 ~~~~~l~~~~~~-~~~~~-~~g~---~~~d~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~ 85 (198)
..++.|.+.=.. .++|. .+|. .|+|+..++.+|+.++.+++.+++.+.+.++|+|+|++.+|+++|+.+|+.+++
T Consensus 261 ~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~ 340 (453)
T 3qw4_B 261 ELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNV 340 (453)
T ss_dssp HHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCC
Confidence 344555444333 23577 5665 699999999999999999999999998778999999999999999999999999
Q ss_pred CEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 86 KFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 86 p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
|+++.||+.+. ++.... ..+...+|++||||||++|||+|+.+++++|+++|+++++++++++++
T Consensus 341 p~~~~rk~~k~------------~g~~~~--i~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~- 405 (453)
T 3qw4_B 341 PLIYPRREAKI------------YGTKAA--IEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRD- 405 (453)
T ss_dssp CEEEESSCC-------------------C--EESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECS-
T ss_pred CEEEEEeeccc------------cCcCce--EecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECC-
Confidence 99998876541 111111 123457999999999999999999999999999999999999999997
Q ss_pred chHHHHhhhcCCCCeeehHHHHHHHHH
Q 029141 166 LKVCLKVQKVIWCPNYIYIYICTLLFV 192 (198)
Q Consensus 166 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ 192 (198)
.++++++.+. ++|++|++++.+++=.
T Consensus 406 ~~g~~~l~~~-g~~v~sL~~~~dl~~~ 431 (453)
T 3qw4_B 406 MGAKAFLNKL-GYDFEAVVGLHQLLPL 431 (453)
T ss_dssp SSHHHHHHHT-TCCEEEEEEHHHHHHH
T ss_pred cchHHHHHhc-CCCEEEEeEHHHHHHH
Confidence 5889999886 9999999999988643
No 16
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.90 E-value=5.1e-23 Score=167.02 Aligned_cols=144 Identities=23% Similarity=0.290 Sum_probs=122.1
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeecc
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~--~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~ 109 (198)
.|+|+..++.+|+.++.+++.+++++.+ .++|+|+|++.||+++|..+|+.+++|+.+.||.++..+..
T Consensus 37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~--------- 107 (211)
T 2aee_A 37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAG--------- 107 (211)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----C---------
T ss_pred eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCc---------
Confidence 5889999999999999999999988854 36899999999999999999999999998887765421110
Q ss_pred ccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehHHHHHH
Q 029141 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYIYICTL 189 (198)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 189 (198)
..+ .+...+|++||||||++|||+|+.++++.|+++|++++++++++++++.++.+++.+. ++|++++++...+
T Consensus 108 --~~i---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~-~~~~~~l~~~~~i 181 (211)
T 2aee_A 108 --NQI---EGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEA-GIKLITLSNYTEL 181 (211)
T ss_dssp --CSE---ESCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHH-TCCEEESCCHHHH
T ss_pred --cee---cCCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhC-CCCEEEEeeHHHH
Confidence 111 1344799999999999999999999999999999999999999999877889999876 8999999988665
Q ss_pred H
Q 029141 190 L 190 (198)
Q Consensus 190 ~ 190 (198)
.
T Consensus 182 ~ 182 (211)
T 2aee_A 182 I 182 (211)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.89 E-value=9.5e-23 Score=168.36 Aligned_cols=144 Identities=19% Similarity=0.309 Sum_probs=116.0
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCcchHhHHHHHHHh------CCCEEEEEcccCCCCceeee
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 103 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~--~~~d~Iv~v~~gG~~~A~~la~~L------~~p~~~~rk~~~~~~~~~~~ 103 (198)
.|+|+ .++.+|+.++.+++.+++.+.+ .++|+|+|++.+|+++|..+|..| ++|+++.||+.+..+..
T Consensus 58 ~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~~--- 133 (238)
T 3n2l_A 58 YFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGEG--- 133 (238)
T ss_dssp EEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC----------
T ss_pred EEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCCC---
Confidence 68887 5789999999999999998864 479999999999999999999997 89999998865422110
Q ss_pred eeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC-----chHHHHhhhcCCC
Q 029141 104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE-----LKVCLKVQKVIWC 178 (198)
Q Consensus 104 ~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~-----~~~~~~l~~~~~~ 178 (198)
..++ +...+| +||||||++|||+|+.+++++|+++|++++++++++++++ ..+.+++.+..++
T Consensus 134 --------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~Gv 201 (238)
T 3n2l_A 134 --------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFGC 201 (238)
T ss_dssp ---------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHCC
T ss_pred --------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcCC
Confidence 1121 334689 9999999999999999999999999999999999999874 2234556333499
Q ss_pred CeeehHHHHHHHH
Q 029141 179 PNYIYIYICTLLF 191 (198)
Q Consensus 179 ~~~~~~~~~~~~~ 191 (198)
|++|++++.+++=
T Consensus 202 ~v~SL~~~~~l~~ 214 (238)
T 3n2l_A 202 AVISIVSLTDLIT 214 (238)
T ss_dssp EEEEEEEHHHHHH
T ss_pred CEEEEEEHHHHHH
Confidence 9999999988753
No 18
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.89 E-value=5.5e-23 Score=167.28 Aligned_cols=143 Identities=17% Similarity=0.286 Sum_probs=117.5
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCcchHhHHHHHHHh------CCCEEEEEcccCCCCceeee
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 103 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~--~~~d~Iv~v~~gG~~~A~~la~~L------~~p~~~~rk~~~~~~~~~~~ 103 (198)
.|+| ..++.+|+.++.+++.|++++.+ .++|+|+|++.+|+++|..+|+.+ ++|+.+.||+.+..+..
T Consensus 33 ~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~~--- 108 (213)
T 1lh0_A 33 YFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEG--- 108 (213)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTTC---
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCCC---
Confidence 6788 57899999999999999998864 368999999999999999999999 89998888754421110
Q ss_pred eeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHh------hhcCC
Q 029141 104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKV------QKVIW 177 (198)
Q Consensus 104 ~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l------~~~~~ 177 (198)
..++ +...+| +||||||++|||+|+.++++.|+++|++++++++++++++ +|++++ .+..+
T Consensus 109 --------~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~-~g~~~l~~~~~~~~~~g 175 (213)
T 1lh0_A 109 --------GSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDYG 175 (213)
T ss_dssp --------SSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHHC
T ss_pred --------Ccee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc-CcccchhhHHHHHHHcC
Confidence 1111 234689 9999999999999999999999999999999999999986 666554 23248
Q ss_pred CCeeehHHHHHHHH
Q 029141 178 CPNYIYIYICTLLF 191 (198)
Q Consensus 178 ~~~~~~~~~~~~~~ 191 (198)
+|++|++++.++.=
T Consensus 176 ~~v~sl~~~~~l~~ 189 (213)
T 1lh0_A 176 CKVISIITLKDLIA 189 (213)
T ss_dssp CEEEEEEEHHHHHH
T ss_pred CCeEEEEEHHHHHH
Confidence 99999999997753
No 19
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.89 E-value=2.5e-22 Score=164.69 Aligned_cols=144 Identities=17% Similarity=0.274 Sum_probs=116.9
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCcchHhHHHHHHHh---------CCCEEEEEcccCCCCce
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI---------GAKFVPMRKPKKLPGEV 100 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~--~~~d~Iv~v~~gG~~~A~~la~~L---------~~p~~~~rk~~~~~~~~ 100 (198)
.|+| ..++.+|+.++.+++.|++++.+ .++|+|++++.+|+++|..+|+.+ ++|+.+.||.++.
T Consensus 37 ~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~---- 111 (226)
T 2ps1_A 37 YFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKD---- 111 (226)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEES----
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhh----
Confidence 5788 56889999999999999998864 368999999999999999999999 9999888775432
Q ss_pred eeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHH----------
Q 029141 101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCL---------- 170 (198)
Q Consensus 101 ~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~---------- 170 (198)
++.+.+.. +..++|++||||||++|||+|+.++++.|+++|++++++++++++++. +++
T Consensus 112 --------~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~-g~~~~~~~~~~~~ 180 (226)
T 2ps1_A 112 --------HGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV-VSTDDKEGLSATQ 180 (226)
T ss_dssp --------STTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB-SCTTCSSCCBHHH
T ss_pred --------cCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc-ccccccccchHHH
Confidence 12222221 234699999999999999999999999999999999999999999863 432
Q ss_pred HhhhcCCCCeeehHHHHHHHH
Q 029141 171 KVQKVIWCPNYIYIYICTLLF 191 (198)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~~~~ 191 (198)
.+.+..++|++|++++.++.-
T Consensus 181 ~~~~~~g~~v~sl~~~~~l~~ 201 (226)
T 2ps1_A 181 TVSKKYGIPVLSIVSLIHIIT 201 (226)
T ss_dssp HHHHHHTCCEEEEEEHHHHHH
T ss_pred HHHHhcCCeEEEEecHHHHHH
Confidence 222334899999999997753
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.81 E-value=2.2e-19 Score=145.27 Aligned_cols=134 Identities=16% Similarity=0.212 Sum_probs=104.8
Q ss_pred cCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCE--EEEEcccCCC
Q 029141 23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLP 97 (198)
Q Consensus 23 ~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~--~~~rk~~~~~ 97 (198)
-|.||.++++..|+..++.+++.++...+.|++++.+ .++++|+|+++||+++|..+|+.+++|+ .+.++++. .
T Consensus 17 ~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y-~ 95 (204)
T 3hvu_A 17 NLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSY-G 95 (204)
T ss_dssp --CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEEC-S
T ss_pred CCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEe-c
Confidence 3789999988778899999999999999999987753 2589999999999999999999999984 33433211 0
Q ss_pred CceeeeeeeeccccceEEEEec--ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 98 GEVISEEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~--~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
.. +.+.+.+.+..+ ..++|++||||||+++||+|+.++++.|+++|++++.++++++++.
T Consensus 96 ~~--------~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 96 HS--------TVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp GG--------GTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred CC--------CccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 00 011122333222 3469999999999999999999999999999999999999999873
No 21
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.79 E-value=7.6e-19 Score=135.03 Aligned_cols=120 Identities=20% Similarity=0.266 Sum_probs=91.2
Q ss_pred HhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEE-EEcccCCCCceeeeeeeeccccceEEEE
Q 029141 39 LLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVISEEYSLEYGKDVMEMH 117 (198)
Q Consensus 39 ~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~-~rk~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (198)
.+.+++.++.+++.|++++.+.++|+|+|+++||+++|..+|+.+++|+.. .++......+. ......+...
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 76 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDE-------RGEKPVITIP 76 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--C-------CCSSCEEEEC
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcc-------cccceeEecc
Confidence 356788888899999988865578999999999999999999999999653 33221101000 0001123222
Q ss_pred ecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 118 ~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
.....+|++||||||++|||+|+.++++.|+++|++++.+++++.++.
T Consensus 77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124 (153)
T ss_dssp CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 233478999999999999999999999999999999999999999874
No 22
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.77 E-value=9.9e-19 Score=143.97 Aligned_cols=143 Identities=17% Similarity=0.136 Sum_probs=103.8
Q ss_pred cCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCEEEEEc-ccCCCC
Q 029141 23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRK-PKKLPG 98 (198)
Q Consensus 23 ~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk-~~~~~~ 98 (198)
..+|+.++.++.|+..++.+++.++..++.|++++.+ .++++|+|+++||+++|..+|+.|+.++...+. ..+.+.
T Consensus 32 ~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P~ 111 (233)
T 1fsg_A 32 ADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPF 111 (233)
T ss_dssp GGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSC
T ss_pred cccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCCc
Confidence 3468888866778888999999999999999988753 468999999999999999999999873221110 001110
Q ss_pred --cee-eeeeeeccccceEEEEec--ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 99 --EVI-SEEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 99 --~~~-~~~~~~~~~~~~~~l~~~--~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
... ..+|..+...+...+..+ ...+||+||||||+++||+|+.+++++|+++|++++.+++++++++
T Consensus 112 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 112 FEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 000 011211111122333322 2468999999999999999999999999999999999999999874
No 23
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.76 E-value=1.5e-18 Score=137.49 Aligned_cols=124 Identities=13% Similarity=0.218 Sum_probs=94.8
Q ss_pred eeeecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCEEE--EEcccCCCCceeeeeee
Q 029141 32 MFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYS 106 (198)
Q Consensus 32 ~~~d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~--~rk~~~~~~~~~~~~~~ 106 (198)
++.|+..++.+++.++..+..|++++.+ .++++|+|+++||+++|..+|+.+++|+.. .+.. +...+
T Consensus 6 ~~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~-~y~~~------- 77 (183)
T 1hgx_A 6 MMDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICS-SYSGT------- 77 (183)
T ss_dssp -CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEE-C-----------
T ss_pred cCcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEE-ecCCc-------
Confidence 3567788899999999999999988863 368999999999999999999999999753 2111 11000
Q ss_pred eccccceEEEEe--cccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 107 LEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 107 ~~~~~~~~~l~~--~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
.+.+...+.. ....+|++||||||+++||+|+.++++.|+++|++++.++++++++.
T Consensus 78 --~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 78 --KSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp -------CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred --ccccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0011111111 23478999999999999999999999999999999999999998863
No 24
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.75 E-value=1.2e-18 Score=141.96 Aligned_cols=133 Identities=15% Similarity=0.203 Sum_probs=101.6
Q ss_pred cCCCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhC---------CCE--E
Q 029141 23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--V 88 (198)
Q Consensus 23 ~~~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~---------~p~--~ 88 (198)
.++||.+|.++.|+..++.+++.++...+.|++++.+ .+.++|+|+++||+++|..+|+.|+ +|+ .
T Consensus 18 ~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~~ 97 (217)
T 1z7g_A 18 LDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVD 97 (217)
T ss_dssp GGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEE
T ss_pred ccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeeee
Confidence 4578888877778889999999999999999988752 4688999999999999999999998 564 2
Q ss_pred EEEcccCCCCceeeeeeeeccccceEEEEe--c-ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 89 PMRKPKKLPGEVISEEYSLEYGKDVMEMHV--G-AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 89 ~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
+.+... +.. +...+.+.+.. . ...+|++||||||+++||+|+.++++.|++.|++.+.+++++++++
T Consensus 98 ~i~~~~-y~~---------~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 98 FIRLKS-YCN---------DQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp EECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred eEEEEE-ecc---------cccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 233111 000 00011111111 1 2368999999999999999999999999999999999999999875
No 25
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.74 E-value=2.7e-18 Score=142.61 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=102.3
Q ss_pred CCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCEEE-EEcccCCCCce-
Q 029141 26 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEV- 100 (198)
Q Consensus 26 ~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~-~rk~~~~~~~~- 100 (198)
|..|..+..|+..++.+++.++...+.|++++.+ .++++|+|+++||+.+|..+++.|+.++++ .||..+.+.+.
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 3344434567788999999999999999987753 257899999999999999999999833222 12222222111
Q ss_pred --eeeeeeeccccceEEEEec--ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 101 --ISEEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 101 --~~~~~~~~~~~~~~~l~~~--~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
...+|..+.+.+.+++..+ ..++|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 1123432333344555433 2368999999999999999999999999999999999999999974
No 26
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=137.03 Aligned_cols=131 Identities=18% Similarity=0.266 Sum_probs=98.6
Q ss_pred CCCCCCceeeecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhC---------CCE--EEE
Q 029141 25 DFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--VPM 90 (198)
Q Consensus 25 ~~~~~g~~~~d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~---------~p~--~~~ 90 (198)
.|+.++.++.|+..++.+++.+...++.|++++.+ .++++|+|+++||+++|..+|+.|+ +|+ ...
T Consensus 28 ~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~i 107 (225)
T 2jbh_A 28 LFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDFI 107 (225)
T ss_dssp GSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEEE
T ss_pred HCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEEE
Confidence 46667655567888999999999999999987753 4689999999999999999999998 674 233
Q ss_pred EcccCCCCceeeeeeeeccccceEEEEe--c-ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 91 RKPKKLPGEVISEEYSLEYGKDVMEMHV--G-AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 91 rk~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
+..+ +.. +...+.+.+.. + ..++||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 108 ~~~~-y~~---------~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 108 RLKS-YRN---------DQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp EEC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEe-ccC---------ccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 3211 000 00111112221 1 2369999999999999999999999999999999999999999874
No 27
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.72 E-value=1.7e-17 Score=131.80 Aligned_cols=121 Identities=16% Similarity=0.208 Sum_probs=91.6
Q ss_pred cHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCE--EEEEcccCCCCceeeeeeeeccc
Q 029141 36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYG 110 (198)
Q Consensus 36 ~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~--~~~rk~~~~~~~~~~~~~~~~~~ 110 (198)
+..++.+++.++..+..|++++.+ .++|+|+|+++||+++|..+|+.+++|+ ...++.+.... + ..
T Consensus 12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~-~--------~~ 82 (185)
T 2geb_A 12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSS-T--------KS 82 (185)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTT-H--------HH
T ss_pred cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCC-C--------cc
Confidence 445778899898888889887753 2689999999999999999999999986 33332111000 0 00
Q ss_pred cceEEEEe--cccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 111 KDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 111 ~~~~~l~~--~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
.+...+.. ....+|++||||||+++||+|+.++++.|+++|++.+.+++++++++
T Consensus 83 ~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 83 SGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp HCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred CccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 11122221 22478999999999999999999999999999999999999998873
No 28
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.72 E-value=2.7e-17 Score=131.21 Aligned_cols=123 Identities=12% Similarity=0.206 Sum_probs=94.6
Q ss_pred eecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCEEE--EEcccCCCCceeeeeeeec
Q 029141 34 QDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE 108 (198)
Q Consensus 34 ~d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~--~rk~~~~~~~~~~~~~~~~ 108 (198)
-|+..++.+++.++...+.|++++.+ .++++|+|+++||+++|..+|+.+++|+.. .+..+. ...+
T Consensus 6 ~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y-~~~~-------- 76 (186)
T 3o7m_A 6 IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSY-GNQT-------- 76 (186)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEEC-C-----------
T ss_pred ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEe-cCCC--------
Confidence 46777889999999999999987753 258899999999999999999999998633 332111 0000
Q ss_pred cccceEEEEec--ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 109 YGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 109 ~~~~~~~l~~~--~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
...+.+.+..+ ...+|++||||||+++||+|+.++++.|+++|++.+.++++++++.
T Consensus 77 ~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 77 ETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp ----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 01122333322 3469999999999999999999999999999999999999999873
No 29
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.71 E-value=2.5e-17 Score=133.65 Aligned_cols=124 Identities=13% Similarity=0.161 Sum_probs=92.0
Q ss_pred eeecHHHhcCHHHHHHHHHHHHHHhcC---------CCccEEEeeCCcchHhHHHHHHHh---CCCE--EEEEcccCCCC
Q 029141 33 FQDITTLLLDTKAFRDTIDLFVERYKD---------KNISVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPG 98 (198)
Q Consensus 33 ~~d~~~~~~~~~~~~~i~~~La~~l~~---------~~~d~Iv~v~~gG~~~A~~la~~L---~~p~--~~~rk~~~~~~ 98 (198)
+.|+..++.+++.+....+.|++++.+ .++++|+|+++||+++|..+|+.+ ++|+ ...++.+. ..
T Consensus 20 ~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y-~~ 98 (211)
T 1pzm_A 20 YPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSY-GS 98 (211)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----
T ss_pred ccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeec-cC
Confidence 447777889999988888888876642 357899999999999999999999 9995 33432111 00
Q ss_pred ceeeeeeeeccccceEEEEe--cccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 99 EVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~~--~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
.+. ..+.+.+.. ...++||+||||||+++||+|+.++++.|+++|++.+.+++++++++
T Consensus 99 ~~~--------~~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 99 GVE--------TSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp -----------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ccc--------cCCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 000 000111111 12368999999999999999999999999999999999999999874
No 30
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.71 E-value=7.5e-17 Score=131.72 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=90.7
Q ss_pred eecHHHhcCHHHHHHHHHHHHHHhcC---CCc-------cEEEeeCCcchHhHHHHHHHh---CCCEE--EEEcccCCCC
Q 029141 34 QDITTLLLDTKAFRDTIDLFVERYKD---KNI-------SVVAGIEARGFIFGPPIALAI---GAKFV--PMRKPKKLPG 98 (198)
Q Consensus 34 ~d~~~~~~~~~~~~~i~~~La~~l~~---~~~-------d~Iv~v~~gG~~~A~~la~~L---~~p~~--~~rk~~~~~~ 98 (198)
-|+..++.+++.++..++.|++++.+ ... ++|+|+++||+++|..+|+.+ ++|+. ..++.+. ..
T Consensus 5 ~di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y-~~ 83 (220)
T 1tc1_A 5 EFAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSY-GE 83 (220)
T ss_dssp TTSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC---
T ss_pred cccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeec-CC
Confidence 35666788999888888888877642 123 899999999999999999999 99953 3332111 00
Q ss_pred ceeeeeeeeccccceEEEEe--cccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 99 EVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~~--~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
.+. ..+.+.+.. ...++||+||||||+++||+|+.++++.|+++|++.+.++++++++.
T Consensus 84 ~~~--------~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 84 GLT--------SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp ---------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred Ccc--------cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 000 001112211 23468999999999999999999999999999999999999999874
No 31
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.71 E-value=3.1e-17 Score=129.48 Aligned_cols=125 Identities=18% Similarity=0.234 Sum_probs=86.1
Q ss_pred cHHHhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCcchHhHHHHHHHhC----CC--EEEEEcccC-CCCceeeee
Q 029141 36 ITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AK--FVPMRKPKK-LPGEVISEE 104 (198)
Q Consensus 36 ~~~~~~~~~~~~~i~~~La~~l~~----~~~d~Iv~v~~gG~~~A~~la~~L~----~p--~~~~rk~~~-~~~~~~~~~ 104 (198)
.+.++.+++.+......|++++.+ .++|+|+|+++||+++|..+|+.++ +| +...++... ..+......
T Consensus 3 ~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (181)
T 1a3c_A 3 QKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSN 82 (181)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------C
T ss_pred cccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCcc
Confidence 345677888888888888887753 2689999999999999999999987 44 333332211 111000000
Q ss_pred eeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 029141 105 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 164 (198)
Q Consensus 105 ~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~G-a~~v~~~~i~~~~ 164 (198)
. ......+.+ ....+|++||||||++|||+|+.++++.|+++| ++++.++++++++
T Consensus 83 ~--~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 83 D--EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp C--CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred c--eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 0 000001111 223789999999999999999999999999997 9999999999886
No 32
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.70 E-value=2.2e-16 Score=133.57 Aligned_cols=103 Identities=26% Similarity=0.340 Sum_probs=85.8
Q ss_pred HhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEe-cccCCCCEEEEEeCcc
Q 029141 56 RYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHV-GAVQAGERALIVDDLV 134 (198)
Q Consensus 56 ~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~gk~VLIVDDvv 134 (198)
++.+.+.++|++++.||+++|..+|+.+|+|+.+.+|+++..+ ..++.. ...++||+|+||||++
T Consensus 148 ~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vliVDDii 213 (286)
T 3lrt_A 148 YYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLIVDDII 213 (286)
T ss_dssp HHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEEEEEEE
T ss_pred HHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEEEeccc
Confidence 3333467999999999999999999999999998887653211 122221 2247999999999999
Q ss_pred cchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHh
Q 029141 135 ATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKV 172 (198)
Q Consensus 135 tTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l 172 (198)
+||+|+.++++.|++.|++++.+++.++..+.++.+++
T Consensus 214 ~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l 251 (286)
T 3lrt_A 214 STGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI 251 (286)
T ss_dssp SSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH
T ss_pred cccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH
Confidence 99999999999999999999999999999888889998
No 33
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.70 E-value=5.6e-17 Score=130.76 Aligned_cols=122 Identities=16% Similarity=0.232 Sum_probs=91.7
Q ss_pred ecHHHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCEE--EEEcccCCCCceeeeeeeecc
Q 029141 35 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEY 109 (198)
Q Consensus 35 d~~~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~~--~~rk~~~~~~~~~~~~~~~~~ 109 (198)
|+...+.+++.+......|++++.+ .++|+|+|+++||+++|..+|+.+++|+. ..++.+. .... .
T Consensus 31 ~~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y-~~~~--------~ 101 (205)
T 1yfz_A 31 DIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSY-GSST--------K 101 (205)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEEC-SHHH--------H
T ss_pred ccceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEec-cCCc--------c
Confidence 3445678999898888889887753 26899999999999999999999999962 3322111 0000 0
Q ss_pred ccceEEEEe--cccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 110 GKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 110 ~~~~~~l~~--~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
+.+...+.. ....+|++||||||+++||+|+.++++.|+++|++.+.+++++++++
T Consensus 102 ~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 102 SSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp HHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ccceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 011122221 23478999999999999999999999999999999999999998863
No 34
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.69 E-value=8.3e-17 Score=124.16 Aligned_cols=119 Identities=15% Similarity=0.205 Sum_probs=88.6
Q ss_pred HhcCHHHHHHHHHHHHHHhcC-CCccEEEeeCCcchHhHHHHHHHhCCC-EEEEEcccCCCCceeeeeeeeccccceEEE
Q 029141 39 LLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAK-FVPMRKPKKLPGEVISEEYSLEYGKDVMEM 116 (198)
Q Consensus 39 ~~~~~~~~~~i~~~La~~l~~-~~~d~Iv~v~~gG~~~A~~la~~L~~p-~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l 116 (198)
.+.+++.++..++.|++++.+ .++|+|+|+++||+++|..+|+.+++| +.+.+.... .. .+.+...+
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y-~~----------~~~~~~~~ 73 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSY-DH----------DNQRELKV 73 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEe-cC----------cccceEEE
Confidence 467899999999999998875 457899999999999999999999999 655542211 00 01111223
Q ss_pred EecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcC
Q 029141 117 HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVI 176 (198)
Q Consensus 117 ~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~ 176 (198)
..+...+||+||||||+++||+|+.++++.|++ +.++++++++ +++...+++
T Consensus 74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~---~~~~~pDy~ 125 (152)
T 1nul_A 74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKP---AGRPLVDDY 125 (152)
T ss_dssp EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECG---GGGGGCSEE
T ss_pred ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECC---CCccCCcEE
Confidence 333346999999999999999999999999987 7889999986 333444443
No 35
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.69 E-value=2.9e-16 Score=126.82 Aligned_cols=113 Identities=23% Similarity=0.343 Sum_probs=78.2
Q ss_pred CccEEEeeCCcchHhHHHHHHHhCCCEEE--EEcccCCCCc-----eee-e-eeee----------cc-----------c
Q 029141 61 NISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGE-----VIS-E-EYSL----------EY-----------G 110 (198)
Q Consensus 61 ~~d~Iv~v~~gG~~~A~~la~~L~~p~~~--~rk~~~~~~~-----~~~-~-~~~~----------~~-----------~ 110 (198)
+.|+|+|+++||+++|..+|+.+++|+.. .+|.+...++ ..+ . .... .. .
T Consensus 23 ~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 102 (208)
T 1wd5_A 23 EAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLEREAARQRDVL 102 (208)
T ss_dssp CSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999865 4443321100 000 0 0000 00 0
Q ss_pred cce---EE-EEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhc
Q 029141 111 KDV---ME-MHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 111 ~~~---~~-l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
.++ +. ......++||+||||||++|||+|+.+|++.|+++|++.+.+++.+.++ ++.+++.+.
T Consensus 103 ~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~--~~~~~l~~~ 169 (208)
T 1wd5_A 103 RKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP--EAVERLKAR 169 (208)
T ss_dssp HHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH--HHHHHHHTT
T ss_pred HHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH--HHHHHhccc
Confidence 000 00 0001236899999999999999999999999999999999999988765 677777654
No 36
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.67 E-value=4.1e-16 Score=123.78 Aligned_cols=117 Identities=18% Similarity=0.213 Sum_probs=87.5
Q ss_pred HhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCEE--EEEcccCCCCceeeeeeeeccccce
Q 029141 39 LLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYGKDV 113 (198)
Q Consensus 39 ~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~~--~~rk~~~~~~~~~~~~~~~~~~~~~ 113 (198)
++.+++.++...+.|++++.+ .++++|+|+++||+++|..+|+.+++|+. +.+.... .... ...+.
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y-~~~~--------~~~~~ 82 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSY-GNAF--------KSSGE 82 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC--------------------
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEe-cCCc--------cccCc
Confidence 577888888888888877753 25799999999999999999999999863 3332111 0000 00111
Q ss_pred EEEEe--cccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 029141 114 MEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (198)
Q Consensus 114 ~~l~~--~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~ 164 (198)
..+.. ....+|++||||||+++||+|+.++++.|++.|++.+.++++++++
T Consensus 83 v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~ 135 (181)
T 2ywu_A 83 VELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKP 135 (181)
T ss_dssp -CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred EEEEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECC
Confidence 11111 2347999999999999999999999999999999999999999986
No 37
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.66 E-value=2.8e-16 Score=124.16 Aligned_cols=121 Identities=17% Similarity=0.202 Sum_probs=84.6
Q ss_pred HhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCcchHhHHHHHHHhC----CCEE--EEEcccCCCCceeeeeeeec
Q 029141 39 LLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AKFV--PMRKPKKLPGEVISEEYSLE 108 (198)
Q Consensus 39 ~~~~~~~~~~i~~~La~~l~~----~~~d~Iv~v~~gG~~~A~~la~~L~----~p~~--~~rk~~~~~~~~~~~~~~~~ 108 (198)
++.+++.+......|+.++.+ .+.++|+|+++||+++|..+|+.++ +|+. ..++... ...... ....
T Consensus 6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~-~~~~~~--~~~~ 82 (181)
T 1ufr_A 6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLY-RDDLTE--IGYR 82 (181)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEe-cCcccc--cccc
Confidence 466788888888888776642 2567999999999999999999887 7763 2332111 000000 0000
Q ss_pred cccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 029141 109 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 164 (198)
Q Consensus 109 ~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~G-a~~v~~~~i~~~~ 164 (198)
.....+.+ ....+|++||||||++|||+|+.++++.|+++| ++.+.++++++++
T Consensus 83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 00001111 233699999999999999999999999999999 8999999999886
No 38
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.66 E-value=8.7e-16 Score=121.46 Aligned_cols=118 Identities=15% Similarity=0.244 Sum_probs=87.4
Q ss_pred HHhcCHHHHHHHHHHHHHHhcC---CCc-cEEEeeCCcchHhHHHHHHHhCCCE--EEEEcccCCCCceeeeeeeecccc
Q 029141 38 TLLLDTKAFRDTIDLFVERYKD---KNI-SVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGK 111 (198)
Q Consensus 38 ~~~~~~~~~~~i~~~La~~l~~---~~~-d~Iv~v~~gG~~~A~~la~~L~~p~--~~~rk~~~~~~~~~~~~~~~~~~~ 111 (198)
.++.+++.++...+.|++++.+ ..+ ++|+|+++||+++|..+++.+++|+ .+.++.+. ...+ ...
T Consensus 6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y-~~~~--------~~~ 76 (177)
T 3ohp_A 6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSY-GNSM--------QSS 76 (177)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC-----------------
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEE-cCCC--------ccC
Confidence 3567888888888888877653 134 8999999999999999999999986 33432211 0000 001
Q ss_pred ceEEEEec--ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 029141 112 DVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (198)
Q Consensus 112 ~~~~l~~~--~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~ 164 (198)
+...+..+ ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++
T Consensus 77 ~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~ 131 (177)
T 3ohp_A 77 RDVRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKP 131 (177)
T ss_dssp CCCCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred CcEEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECC
Confidence 11112222 336899999999999999999999999999999999999999986
No 39
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.63 E-value=1.2e-15 Score=129.09 Aligned_cols=111 Identities=23% Similarity=0.308 Sum_probs=84.5
Q ss_pred HHHHHhcC-CCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEE
Q 029141 52 LFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIV 130 (198)
Q Consensus 52 ~La~~l~~-~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIV 130 (198)
.|++++.+ .+.++|++++.||+++|..+|+.+++|+.+.+|+++..+ ...+.+. +..++||+|+||
T Consensus 145 ~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~VlIV 211 (284)
T 1u9y_A 145 KLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVFIV 211 (284)
T ss_dssp HHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEEEE
T ss_pred HHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEEEE
Confidence 33444432 357899999999999999999999999987766543211 0011111 224799999999
Q ss_pred eCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhc
Q 029141 131 DDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 131 DDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
||++|||+|+.++++.|+++|++.+.++++++..+.++.+++.+.
T Consensus 212 DDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~ 256 (284)
T 1u9y_A 212 DDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSA 256 (284)
T ss_dssp EEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHH
T ss_pred ecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhC
Confidence 999999999999999999999999999999988777889998764
No 40
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.63 E-value=3.1e-15 Score=128.53 Aligned_cols=120 Identities=20% Similarity=0.182 Sum_probs=90.3
Q ss_pred HHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEE
Q 029141 38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH 117 (198)
Q Consensus 38 ~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (198)
++...|.+.+++ .+.+.+.+.++||+++.||+.+|..+|+.|++|+.+.+|+++..+.. ....+
T Consensus 144 ~l~a~p~l~~~i----~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v-----------~~~~l- 207 (326)
T 3s5j_B 144 NLYAEPAVLKWI----RENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEV-----------DRMVL- 207 (326)
T ss_dssp EECSHHHHHHHH----HHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC------------------CCEEE-
T ss_pred ceEcHHHHHHHH----HHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCee-----------eEEec-
Confidence 444445544444 34443335679999999999999999999999999888765422211 01111
Q ss_pred ecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhh
Q 029141 118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQK 174 (198)
Q Consensus 118 ~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~ 174 (198)
...++||+|+||||+++||+|+.++++.|++.|++.+.+++.++..+.++.+++.+
T Consensus 208 -~g~v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~ 263 (326)
T 3s5j_B 208 -VGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINN 263 (326)
T ss_dssp -ESCCTTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHH
T ss_pred -cccCCCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhh
Confidence 23379999999999999999999999999999999999999998877788998875
No 41
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.61 E-value=4.9e-15 Score=120.98 Aligned_cols=126 Identities=18% Similarity=0.184 Sum_probs=88.2
Q ss_pred HHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCC------CEEEEEcc-cCCCCceeeeeeeeccc
Q 029141 38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGA------KFVPMRKP-KKLPGEVISEEYSLEYG 110 (198)
Q Consensus 38 ~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~------p~~~~rk~-~~~~~~~~~~~~~~~~~ 110 (198)
.++.+++.++..++.|+.++.+.++++|+|+++||+++|..+|+.|+. |+.+++.. ...... ..... ...+
T Consensus 6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~-~~~~~-~~~g 83 (221)
T 2xbu_A 6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNS-VGSEV-EEVG 83 (221)
T ss_dssp CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC---------------
T ss_pred eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCcc-ccccc-cccC
Confidence 356788889999999999985557899999999999999999999998 44333311 110000 00000 0001
Q ss_pred cceEEE--Ee----cccCCCCEEEEEeCcccchHHHHHHHHHHHh--------cCC---------eEEEEEEEEecCC
Q 029141 111 KDVMEM--HV----GAVQAGERALIVDDLVATGGTLSAAIRLLER--------VGV---------HVVECACVIELPE 165 (198)
Q Consensus 111 ~~~~~l--~~----~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~--------~Ga---------~~v~~~~i~~~~~ 165 (198)
...+.. .. ...++||+||||||+++||+||.++++.|++ .|+ ..+.++|+++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 84 VKVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp CEEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred ceeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 111100 10 2347999999999999999999999999997 786 5899999999974
No 42
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.59 E-value=6.1e-15 Score=129.21 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=87.9
Q ss_pred HHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCC------C----ceeeeeeee
Q 029141 38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP------G----EVISEEYSL 107 (198)
Q Consensus 38 ~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~------~----~~~~~~~~~ 107 (198)
++...|.+.++ +.+.+.+.+.++|++++.||+++|..+|+.|++|+.+.+|++... + ......+..
T Consensus 172 ~l~A~p~La~~----I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~ 247 (379)
T 2ji4_A 172 NLRASPFLLQY----IQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAI 247 (379)
T ss_dssp EECCHHHHHHH----HHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC--------------------------
T ss_pred eeccHHHHHHH----HHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCccccccccc
Confidence 34444544444 444433335689999999999999999999999998886654310 0 000000000
Q ss_pred ccccc------e--EEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhh
Q 029141 108 EYGKD------V--MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQK 174 (198)
Q Consensus 108 ~~~~~------~--~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~ 174 (198)
+++.. . ..+.....++||+|+||||+++||+|+.++++.|++.|++.+.+++.++..+.++.+++.+
T Consensus 248 ~~g~~i~~~~~~~~~~~~l~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~ 322 (379)
T 2ji4_A 248 HPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEE 322 (379)
T ss_dssp ---------------CCCEESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHH
T ss_pred ccccchhhhhhhcccccccccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHh
Confidence 00000 0 0001113479999999999999999999999999999999999999998877788888875
No 43
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.58 E-value=5.8e-15 Score=118.84 Aligned_cols=122 Identities=17% Similarity=0.212 Sum_probs=85.8
Q ss_pred HHHhcCHHHHHHHHHHHHHHhcC-----------CCccEEEeeCCcchHhHHHHHHHh----CCCEEE--EEcc-cCCCC
Q 029141 37 TTLLLDTKAFRDTIDLFVERYKD-----------KNISVVAGIEARGFIFGPPIALAI----GAKFVP--MRKP-KKLPG 98 (198)
Q Consensus 37 ~~~~~~~~~~~~i~~~La~~l~~-----------~~~d~Iv~v~~gG~~~A~~la~~L----~~p~~~--~rk~-~~~~~ 98 (198)
..++.+++.++...+.|+.++.+ .+.++|+|+++||+++|..+|+.| ++|+.. .... .+...
T Consensus 13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~ 92 (201)
T 1w30_A 13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDL 92 (201)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCc
Confidence 34677898888888888876642 256799999999999999999999 576432 2211 11000
Q ss_pred ceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 029141 99 EVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 164 (198)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~G-a~~v~~~~i~~~~ 164 (198)
.. .. ......+.+ .....+|++||||||+++||+|+.++++.|+++| ++.+.++++++++
T Consensus 93 ~~-~~----~~~~~~~~~-~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 93 MI-KP----PRPLASTSI-PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp -----------CCCCCBC-CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred cc-cc----cceeecccC-CCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 00 00 000000110 0123689999999999999999999999999999 9999999999985
No 44
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.57 E-value=1.1e-14 Score=124.92 Aligned_cols=101 Identities=19% Similarity=0.242 Sum_probs=76.4
Q ss_pred CccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHH
Q 029141 61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL 140 (198)
Q Consensus 61 ~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl 140 (198)
+.++|++++.||+.+|..+|+.|++|+.+.+|+++..+.. +.+.+ ...++||+|+||||+++||+|+
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i--~g~v~gk~viiVDDii~TG~Tl 232 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNI--IGEVEGRTCVIMDDMVDTAGTL 232 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEc--cccCCCCEEEEEecccCchHHH
Confidence 5679999999999999999999999998887765422110 01111 1236999999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhh
Q 029141 141 SAAIRLLERVGVHVVECACVIELPELKVCLKVQK 174 (198)
Q Consensus 141 ~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~ 174 (198)
.++++.|++.|++.+.+++.++..+.++.+++.+
T Consensus 233 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~ 266 (319)
T 3dah_A 233 CKAAQVLKERGAKQVFAYATHPVLSGGAADRIAA 266 (319)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHh
Confidence 9999999999999999999999877788899875
No 45
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.56 E-value=2.3e-14 Score=122.82 Aligned_cols=102 Identities=20% Similarity=0.279 Sum_probs=79.8
Q ss_pred CCccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHH
Q 029141 60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT 139 (198)
Q Consensus 60 ~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~T 139 (198)
.+.++|++++.||+.+|..+|+.+++|+...+|+++... ..+.+.+. ..++||+|+||||++|||+|
T Consensus 166 ~~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~-----------~~~~~~l~--~~v~gk~VlLVDDiitTG~T 232 (317)
T 1dku_A 166 LEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPN-----------VAEVMNIV--GNIEGKTAILIDDIIDTAGT 232 (317)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE--SCCTTCEEEEECSEESSCHH
T ss_pred CCCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEecccc-----------ceeEEEec--ccCCCCEEEEEecccCCCHH
Confidence 356799999999999999999999999987766543110 01122222 23799999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhh
Q 029141 140 LSAAIRLLERVGVHVVECACVIELPELKVCLKVQK 174 (198)
Q Consensus 140 l~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~ 174 (198)
+.+|++.|+++|++.+.+++.|...+.++.+++.+
T Consensus 233 l~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~ 267 (317)
T 1dku_A 233 ITLAANALVENGAKEVYACCTHPVLSGPAVERINN 267 (317)
T ss_dssp HHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHT
T ss_pred HHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhh
Confidence 99999999999999999999777766678888764
No 46
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.54 E-value=3.3e-14 Score=112.78 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=86.3
Q ss_pred HHhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCcchHhHHHHHHHhCCCEEEEE-cccCCCCceeeeeeeeccccce
Q 029141 38 TLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMR-KPKKLPGEVISEEYSLEYGKDV 113 (198)
Q Consensus 38 ~~~~~~~~~~~i~~~La~~l~~---~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~r-k~~~~~~~~~~~~~~~~~~~~~ 113 (198)
.++.+++.++...+.||.++.+ .+..+++|+.+||+++|+.+++.++.|....- .-..+.+.+ .+.+.
T Consensus 11 ~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~~~~--------~~~g~ 82 (181)
T 3acd_A 11 PVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAF--------KSSGE 82 (181)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------
T ss_pred cEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEecCCc--------CCCCc
Confidence 4667888888888888877642 24568999999999999999999998864321 101000000 01111
Q ss_pred EEEEe--cccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 029141 114 MEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (198)
Q Consensus 114 ~~l~~--~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~ 164 (198)
..+.. +..++||+|||||||++||.|++++.+.|.+.|++.+.++++++++
T Consensus 83 ~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~ 135 (181)
T 3acd_A 83 VELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKP 135 (181)
T ss_dssp -CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred eEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcC
Confidence 22222 2347999999999999999999999999999999999999999985
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.54 E-value=3.1e-14 Score=128.90 Aligned_cols=118 Identities=17% Similarity=0.159 Sum_probs=80.0
Q ss_pred CHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEE--EEEcccCCCCceeeeeee-eccc-cceEEEE
Q 029141 42 DTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYS-LEYG-KDVMEMH 117 (198)
Q Consensus 42 ~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~--~~rk~~~~~~~~~~~~~~-~~~~-~~~~~l~ 117 (198)
+.++.+.+++.+.+.+.+.++|+|+++|.+|+++|..+|+.+++|+. +.+++.. ..+....+.. .... +..+...
T Consensus 275 r~~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~-~~t~i~~~~~~R~~~v~~~~~~~ 353 (504)
T 1ecf_A 275 RVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYV-GRTFIMPGQQLRRKSVRRKLNAN 353 (504)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCC-CCCCCCSSSCCCCCCSTTTEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEeccc-CCceeCccHHHHHHHHHhhhccc
Confidence 34444555555554444346899999999999999999999999986 3332221 1111110000 0001 1123221
Q ss_pred ecccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEE
Q 029141 118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 161 (198)
Q Consensus 118 ~~~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~ 161 (198)
...++||+||||||+++||+|+.+++++|+++||+.|.+++++
T Consensus 354 -~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~ 396 (504)
T 1ecf_A 354 -RAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA 396 (504)
T ss_dssp -GGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESS
T ss_pred -cccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEe
Confidence 2347999999999999999999999999999999999998874
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.48 E-value=9.1e-14 Score=124.44 Aligned_cols=145 Identities=16% Similarity=0.177 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEE-EEcccCCCCceeeeee--eeccccceEEEEeccc
Q 029141 45 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVISEEY--SLEYGKDVMEMHVGAV 121 (198)
Q Consensus 45 ~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~-~rk~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~ 121 (198)
....+++.|++.+. ...|+|+++|.+|..+|..+|+.+++|+.. ..|.+....+....+. +....+..+... ...
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~-~~~ 335 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAV-RGV 335 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEEC-HHH
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhcccc-ccc
Confidence 45567777777664 468999999999999999999999999863 3332211111110000 000011123221 223
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEE-----------ecCCch---H----HHHhhhcCCCCeeeh
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI-----------ELPELK---V----CLKVQKVIWCPNYIY 183 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~-----------~~~~~~---~----~~~l~~~~~~~~~~~ 183 (198)
++||+||||||++|||+|+.++++.|+++||+.|.+++++ +.+... + .+.+.+..+.+..++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~pp~~~~~~~gid~~~~~~li~~~~~~~~i~~~~~~~~l~~ 415 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCFYGIDTSTHEELIASSHSVEEIRQEIGADTLSF 415 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCCSCCCSCTTTCCSSCCSTTTSCHHHHHHHHTCSEEEE
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEecCCccccceeeecCCCHHHhhccCCCHHHHHHHhCcCEEEE
Confidence 6899999999999999999999999999999999999853 211110 1 134556667888888
Q ss_pred HHHHHHHH
Q 029141 184 IYICTLLF 191 (198)
Q Consensus 184 ~~~~~~~~ 191 (198)
+.+..|+=
T Consensus 416 ~s~~~l~~ 423 (459)
T 1ao0_A 416 LSVEGLLK 423 (459)
T ss_dssp CCHHHHHH
T ss_pred EcHHHHHH
Confidence 88888753
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.39 E-value=2.4e-13 Score=111.60 Aligned_cols=111 Identities=7% Similarity=0.181 Sum_probs=82.1
Q ss_pred HHhcCHHHHHHHHHHHHHHhcC---C--CccEEEeeCCcchHhHHHHHHHhCCCEEE--EEcccCCCCceeeeeeeeccc
Q 029141 38 TLLLDTKAFRDTIDLFVERYKD---K--NISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYG 110 (198)
Q Consensus 38 ~~~~~~~~~~~i~~~La~~l~~---~--~~d~Iv~v~~gG~~~A~~la~~L~~p~~~--~rk~~~~~~~~~~~~~~~~~~ 110 (198)
+++.+++.+....+.|++++.+ . +.++|+|+++||+++|..+++.+++|+.. .+.. +|..+..
T Consensus 33 ~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs----------~y~~~~s 102 (230)
T 1dqn_A 33 HLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVS----------SYKGTRQ 102 (230)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCE----------EEECSSC
T ss_pred cEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEE----------EeCCCcc
Confidence 4667888888888888877642 2 56799999999999999999999999743 2211 1100000
Q ss_pred cceEEE-Eec--ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 029141 111 KDVMEM-HVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (198)
Q Consensus 111 ~~~~~l-~~~--~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~ 164 (198)
.+ ..+ ..+ ..++||+||||||+++||+||.++++.|++ +.++++++++
T Consensus 103 ~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~ 153 (230)
T 1dqn_A 103 ES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKD 153 (230)
T ss_dssp EE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESC
T ss_pred Cc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECC
Confidence 01 221 111 237999999999999999999999999998 7788899987
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.22 E-value=1.1e-10 Score=94.37 Aligned_cols=101 Identities=25% Similarity=0.229 Sum_probs=74.1
Q ss_pred ccEEEeeCCcchHhHHHHHHHh-CCCEEEEEcccCCCCceeeeeeeeccccceE-EEEecccCCCCEEEEEeCcccchHH
Q 029141 62 ISVVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT 139 (198)
Q Consensus 62 ~d~Iv~v~~gG~~~A~~la~~L-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VLIVDDvvtTG~T 139 (198)
..++|++.++|++++..+.+.+ ..++....+.+... ..+... .......++|++|+||||+++||+|
T Consensus 71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~~-----------t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T 139 (209)
T 1i5e_A 71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQ-----------TLKPVEYYVKLPSDVEERDFIIVDPMLATGGS 139 (209)
T ss_dssp CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCTT-----------CSSCEEEEEECCTTTTTSEEEEECSEESSSHH
T ss_pred ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcCC-----------CCceEEEEEcCCCccCCCEEEEEcCCCcCHHH
Confidence 4589999999999999999988 34443332222100 011111 1122234789999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhc
Q 029141 140 LSAAIRLLERVGVHVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 140 l~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
+.++++.|++.|++.+.+++++..+ .|.+++.+.
T Consensus 140 ~~~a~~~L~~~G~~~I~~~~lv~~~--~g~~~l~~~ 173 (209)
T 1i5e_A 140 AVAAIDALKKRGAKSIKFMCLIAAP--EGVKAVETA 173 (209)
T ss_dssp HHHHHHHHHHTTCCCEEEECSEECH--HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHHHh
Confidence 9999999999999999999888765 788888864
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.17 E-value=3.3e-10 Score=92.29 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=74.4
Q ss_pred EEEeeCCcchHhHHHHHHHh-CCCEEEEEcccCCCCceeeeeeeeccccceE-EEEecccCCCCEEEEEeCcccchHHHH
Q 029141 64 VVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLS 141 (198)
Q Consensus 64 ~Iv~v~~gG~~~A~~la~~L-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VLIVDDvvtTG~Tl~ 141 (198)
++|++.++|+.++..+++.+ +.++......+... .++... .......++|++|+||||+++||+|+.
T Consensus 85 viV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~-----------t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~ 153 (221)
T 1o5o_A 85 VVVPILRAGLVMADGILELLPNASVGHIGIYRDPE-----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSI 153 (221)
T ss_dssp EEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT-----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHHHH
T ss_pred EEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC-----------CCceeEEEecCCCccCCCEEEEECCccccHHHHH
Confidence 89999999999999999998 55554332222100 011111 112233579999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhc
Q 029141 142 AAIRLLERVGVHVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 142 ~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
++++.|++.|++.+.+++++..+ .+.+++.+.
T Consensus 154 ~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~~ 185 (221)
T 1o5o_A 154 KAIEILKENGAKKITLVALIAAP--EGVEAVEKK 185 (221)
T ss_dssp HHHHHHHHTTCCEEEEECSEECH--HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHHH
Confidence 99999999999999999888765 788898874
No 52
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.02 E-value=2.7e-09 Score=86.16 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=72.4
Q ss_pred cEEEeeCCcchHhHHHHHHHhCC-CEEEEEcccCCCCceeeeeeeeccccceEEE-EecccCCCCEEEEEeCcccchHHH
Q 029141 63 SVVAGIEARGFIFGPPIALAIGA-KFVPMRKPKKLPGEVISEEYSLEYGKDVMEM-HVGAVQAGERALIVDDLVATGGTL 140 (198)
Q Consensus 63 d~Iv~v~~gG~~~A~~la~~L~~-p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~gk~VLIVDDvvtTG~Tl 140 (198)
-++||+.++|+.++..+.+.+.- ++-...-.+. . ..++...+. +....++|++|+||||++.||+|+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd-~----------~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~ 139 (208)
T 2ehj_A 71 ITVVPILRAGLGMMDGVLENVPSARISVVGMYRN-E----------ETLEPVPYFQKLVSNIDERMALIVDPMLATGGSV 139 (208)
T ss_dssp CEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEEC-T----------TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHH
T ss_pred eEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEc-C----------CCCceEEEecCCCCccCCCEEEEECCccccHHHH
Confidence 38999999999999999998751 2211111000 0 011111111 223347899999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhc
Q 029141 141 SAAIRLLERVGVHVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 141 ~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
.++++.|++.|++.+.+++++..+ .+.+++.+.
T Consensus 140 ~~ai~~L~~~G~~~I~~~~lv~~p--~g~~~l~~~ 172 (208)
T 2ehj_A 140 IATIDLLKKAGCSSIKVLVLVAAP--EGIAALEKA 172 (208)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEECH--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHHH
Confidence 999999999999999999998876 688888764
No 53
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.01 E-value=2.3e-09 Score=86.58 Aligned_cols=99 Identities=20% Similarity=0.206 Sum_probs=72.5
Q ss_pred cEEEeeCCcchHhHHHHHHHhCC-CEEEEEcccCCCCceeeeeeeeccccceE-EEEecccCCCCEEEEEeCcccchHHH
Q 029141 63 SVVAGIEARGFIFGPPIALAIGA-KFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTL 140 (198)
Q Consensus 63 d~Iv~v~~gG~~~A~~la~~L~~-p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VLIVDDvvtTG~Tl 140 (198)
-++||+.++|+.++..+.+.+.- ++......+. . +.++... ..+.. .++|++|+||||+++||+|+
T Consensus 70 ~~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd-~----------~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~ 137 (208)
T 2e55_A 70 IVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRN-E----------ETLESHIYYSRLP-ELKGKIVVILDPMLATGGTL 137 (208)
T ss_dssp EEEEEEETTTHHHHHHHHHHSTTCEECEEEEEEC-T----------TTCCEEEEEEECC-CCBTSEEEEECSEESSSHHH
T ss_pred EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEe-c----------CCCceEEEecCCC-CCCCCEEEEECCccccHHHH
Confidence 38999999999999999998752 2211111000 0 0111112 11223 57899999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhc
Q 029141 141 SAAIRLLERVGVHVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 141 ~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
.++++.|++.|++.+.+++++..+ .+.+++.+.
T Consensus 138 ~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~~ 170 (208)
T 2e55_A 138 EVALREILKHSPLKVKSVHAIAAP--EGLKRIEEK 170 (208)
T ss_dssp HHHHHHHHTTCBSEEEEEEEEECH--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEECH--HHHHHHHHH
Confidence 999999999999999999998876 788888864
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.91 E-value=2.7e-09 Score=86.17 Aligned_cols=100 Identities=23% Similarity=0.283 Sum_probs=71.1
Q ss_pred cEEEeeCCcchHhHHHHHHHhC-CCEEEEEcccCCCCceeeeeeeeccccceEEE-EecccCCCCEEEEEeCcccchHHH
Q 029141 63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEM-HVGAVQAGERALIVDDLVATGGTL 140 (198)
Q Consensus 63 d~Iv~v~~gG~~~A~~la~~L~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~gk~VLIVDDvvtTG~Tl 140 (198)
-++||+.++|+.++..+.+.+. .++-...-.+. + +.++...+. +....++|++|+||||+++||+|+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd-~----------~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~ 139 (208)
T 1v9s_A 71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYRD-P----------ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSA 139 (208)
T ss_dssp CEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHH
T ss_pred eEEEEeccchHHHHHHHHHhCCCCeeeEEEEEEc-C----------CCCCceEEeccCCCccCCCEEEEECCccccHHHH
Confidence 3899999999999999998775 22222111110 0 001111111 223346899999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhc
Q 029141 141 SAAIRLLERVGVHVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 141 ~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
.++++.|++.|++.+.+++++..+ .+.+++.+.
T Consensus 140 ~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~~ 172 (208)
T 1v9s_A 140 SLALSLLKERGATGVKLMAILAAP--EGLERIAKD 172 (208)
T ss_dssp HHHHHHHHHTTCCSCEEEEEEECH--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHHH
Confidence 999999999999999999998776 788888874
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.90 E-value=8.3e-09 Score=85.12 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=71.4
Q ss_pred EEEeeCCcchHhHHHHHHHhC-CCEEEEEcccCCCCceeeeeeeeccccceEEE-EecccCCCCEEEEEeCcccchHHHH
Q 029141 64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEM-HVGAVQAGERALIVDDLVATGGTLS 141 (198)
Q Consensus 64 ~Iv~v~~gG~~~A~~la~~L~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~gk~VLIVDDvvtTG~Tl~ 141 (198)
++||+.++|+.++..+.+.+. .++-...-.+. . +.++...+. +....++|++|+||||++.||+|+.
T Consensus 105 ~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd-~----------~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~~ 173 (243)
T 1bd3_D 105 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRD-E----------TTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVC 173 (243)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCCEEEEEEEEC-S----------SSCCEEEEEEECCTTGGGSEEEEECSEESSCHHHH
T ss_pred EEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEc-C----------CCCCeEEEeccCCcccCCCEEEEECCccccHHHHH
Confidence 688999999999999999874 23322110000 0 011111211 2233478999999999999999999
Q ss_pred HHHHHHHhcCC--eEEEEEEEEecCCchHHHHhhhc
Q 029141 142 AAIRLLERVGV--HVVECACVIELPELKVCLKVQKV 175 (198)
Q Consensus 142 ~a~~~L~~~Ga--~~v~~~~i~~~~~~~~~~~l~~~ 175 (198)
++++.|++.|+ +.+.+++++..+ .|.+++.+.
T Consensus 174 ~ai~~L~~~G~~p~~I~~~~lvaap--~g~~~l~~~ 207 (243)
T 1bd3_D 174 KAIEVLLRLGVKEERIIFVNILAAP--QGIERVFKE 207 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEEEEECH--HHHHHHHHH
T ss_pred HHHHHHHHcCCCcceEEEEEEEeCH--HHHHHHHHH
Confidence 99999999999 888888888765 788898874
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.75 E-value=3.3e-08 Score=80.27 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=72.8
Q ss_pred EEEeeCCcchHhHHHHHHHhC-CCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHHH
Q 029141 64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSA 142 (198)
Q Consensus 64 ~Iv~v~~gG~~~A~~la~~L~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~~ 142 (198)
++|++.++|.+++..+.+.+. +++-...-.+. + .+ +. .....+.. .++|++|+|+||++.||+|+.+
T Consensus 80 ~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd-~-~t--~p-------~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ 147 (217)
T 3dmp_A 80 AIVPVLRAGVGMSDGLLELIPSARVGHIGVYRA-D-DH--RP-------VEYLVRLP-DLEDRIFILCDPMVATGYSAAH 147 (217)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTSEECEEECSCC-C-SS--SC-------CCSEEECC-CCTTCEEEEECSEESSSHHHHH
T ss_pred EEEEecccchHHHHHHHHhCcCCceeEEEEEEC-C-CC--Cc-------EEEeecCC-CCCCCEEEEEcCcccccHHHHH
Confidence 788999999999999999874 33322211110 0 00 00 00111223 4789999999999999999999
Q ss_pred HHHHHHhcCC--eEEEEEEEEecCCchHHHHhhhc-CCCCee
Q 029141 143 AIRLLERVGV--HVVECACVIELPELKVCLKVQKV-IWCPNY 181 (198)
Q Consensus 143 a~~~L~~~Ga--~~v~~~~i~~~~~~~~~~~l~~~-~~~~~~ 181 (198)
+++.|++.|+ +.+.+++++..+ .|.+++.+. .++.++
T Consensus 148 ai~~L~~~G~pe~~I~~~~~vaa~--egl~~l~~~~P~v~i~ 187 (217)
T 3dmp_A 148 AIDVLKRRGVPGERLMFLALVAAP--EGVQVFQDAHPDVKLY 187 (217)
T ss_dssp HHHHHHTTTCCGGGEEEECSEECH--HHHHHHHHHCTTCEEE
T ss_pred HHHHHHHcCCCcCeEEEEEEEeCH--HHHHHHHHHCCCCEEE
Confidence 9999999999 778888877654 788888874 345443
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.57 E-value=3.2e-07 Score=74.37 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=71.5
Q ss_pred cEEEeeCCcchHhHHHHHHHhC-CCEEE---EEcccCCCCceeeeeeeeccccceE-EEEecccCCCC--EEEEEeCccc
Q 029141 63 SVVAGIEARGFIFGPPIALAIG-AKFVP---MRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGE--RALIVDDLVA 135 (198)
Q Consensus 63 d~Iv~v~~gG~~~A~~la~~L~-~p~~~---~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk--~VLIVDDvvt 135 (198)
-++|++.++|.+++..+...+. .+.-. .|.... .. ... ...+... +.+.. .++++ +|+|+||++.
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t--~~--~~~---~~~~p~~~y~klP-~i~~~~~~VilvDp~la 144 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVD--GK--EVP---KDMDVYIYYKKIP-DIRAKVDNVIIADPMIA 144 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCC--CS--SCC---SCCCEEEEEEECC-CCCTTTCEEEEECSEES
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCc--cc--ccc---cccCceEeeccCC-CccCCcceEEEEcCCcc
Confidence 3788999999999999998874 23321 121110 00 000 0000111 11223 46888 9999999999
Q ss_pred chHHHHHHHHHHHhcCC-eEEEEEEEEecCCchHHHHhhhc-CCCCee
Q 029141 136 TGGTLSAAIRLLERVGV-HVVECACVIELPELKVCLKVQKV-IWCPNY 181 (198)
Q Consensus 136 TG~Tl~~a~~~L~~~Ga-~~v~~~~i~~~~~~~~~~~l~~~-~~~~~~ 181 (198)
||+|+.+|++.|++ |+ +.+.+++++..+ .|.+++.+. .++.++
T Consensus 145 TG~T~~~ai~~L~~-G~p~~I~~~~~vaa~--~gl~~l~~~~P~v~I~ 189 (216)
T 1xtt_A 145 TASTMLKVLEEVVK-ANPKRIYIVSIISSE--YGVNKILSKYPFIYLF 189 (216)
T ss_dssp SSHHHHHHHHHHGG-GCCSEEEEECSEEEH--HHHHHHHHHCTTSEEE
T ss_pred chHHHHHHHHHHHh-CCCCeEEEEEEecCH--HHHHHHHHHCCCcEEE
Confidence 99999999999999 99 888888877655 788888764 355443
No 58
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=78.39 E-value=19 Score=30.11 Aligned_cols=76 Identities=9% Similarity=0.142 Sum_probs=47.8
Q ss_pred CCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchH--H--HHHHH
Q 029141 69 EARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG--T--LSAAI 144 (198)
Q Consensus 69 ~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~--T--l~~a~ 144 (198)
-.+.-.+|..+|..||+|+.....++. ..++..+.....++|+.|.||-.....-. - +--++
T Consensus 13 g~~~~~La~~ia~~lg~~l~~~~~~~F--------------~dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~i 78 (319)
T 3dah_A 13 GNANPALAQEVVKILGIPLGKAMVSRF--------------SDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMV 78 (319)
T ss_dssp CSSCHHHHHHHHHHHTSCCCCEEEEEC--------------TTSCEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCceeeeEEEEC--------------CCCCEEEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHH
Confidence 344458999999999998754332221 11223333345589999999977554311 1 34566
Q ss_pred HHHHhcCCeEEEEE
Q 029141 145 RLLERVGVHVVECA 158 (198)
Q Consensus 145 ~~L~~~Ga~~v~~~ 158 (198)
+.++.+||+.+.++
T Consensus 79 dA~k~asA~rIt~V 92 (319)
T 3dah_A 79 DALKRASAGRITAA 92 (319)
T ss_dssp HHHHHTTBSEEEEE
T ss_pred HHHHHcCCcEEEEE
Confidence 77889999876544
No 59
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=75.12 E-value=20 Score=29.32 Aligned_cols=73 Identities=10% Similarity=0.074 Sum_probs=46.3
Q ss_pred chHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccc-hHH--HHHHHHHHH
Q 029141 72 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT--LSAAIRLLE 148 (198)
Q Consensus 72 G~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtT-G~T--l~~a~~~L~ 148 (198)
.-.+|..+|..||+|+.....++.. .++..+.....++|+.|.|+-..... -.- +--+++.++
T Consensus 9 ~~~la~~ia~~l~~~l~~~~~~~F~--------------dGE~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~ 74 (284)
T 1u9y_A 9 SQNLAFKVAKLLNTKLTRVEYKRFP--------------DNEIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALR 74 (284)
T ss_dssp CHHHHHHHHHHTTCCEECEEEEECT--------------TCCEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCeeeeeEEEECC--------------CCCEEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 4479999999999998654322211 12233333455789999999886542 121 234567778
Q ss_pred hcCCeEEEEE
Q 029141 149 RVGVHVVECA 158 (198)
Q Consensus 149 ~~Ga~~v~~~ 158 (198)
+++|+.+.++
T Consensus 75 ~~~a~~i~~v 84 (284)
T 1u9y_A 75 DEGVKKITLV 84 (284)
T ss_dssp TTTCCEEEEE
T ss_pred HcCCceEEEE
Confidence 8999876544
No 60
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=66.68 E-value=57 Score=27.34 Aligned_cols=74 Identities=16% Similarity=0.111 Sum_probs=45.5
Q ss_pred cchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccc--hHH--HHHHHHH
Q 029141 71 RGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GGT--LSAAIRL 146 (198)
Q Consensus 71 gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtT--G~T--l~~a~~~ 146 (198)
+.-.+|..+|..||+|+.....++. ..++..+.....++|+.|.||-..... -.- +--+++.
T Consensus 11 ~~~~La~~ia~~lg~~l~~~~~~~F--------------~dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA 76 (326)
T 3s5j_B 11 SHQDLSQKIADRLGLELGKVVTKKF--------------SNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINA 76 (326)
T ss_dssp SCCHHHHHHHHHTTCCCCCEEEEEC--------------TTSCEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCceeeeEEeEC--------------CCCCEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHH
Confidence 3347999999999998754322211 122233333455899999999764432 111 2245566
Q ss_pred HHhcCCeEEEEE
Q 029141 147 LERVGVHVVECA 158 (198)
Q Consensus 147 L~~~Ga~~v~~~ 158 (198)
++.++|+.+.++
T Consensus 77 ~k~asA~rIt~V 88 (326)
T 3s5j_B 77 CKIASASRVTAV 88 (326)
T ss_dssp HHHTTCSEEEEE
T ss_pred HHhcCCcEEEEe
Confidence 788999887554
No 61
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=62.90 E-value=9.6 Score=27.44 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=20.2
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
++-|||||||--+. .....+.|++.|..++
T Consensus 11 k~~rILiVDD~~~~---r~~l~~~L~~~G~~~v 40 (134)
T 3to5_A 11 KNMKILIVDDFSTM---RRIVKNLLRDLGFNNT 40 (134)
T ss_dssp TTCCEEEECSCHHH---HHHHHHHHHHTTCCCE
T ss_pred CCCEEEEEeCCHHH---HHHHHHHHHHcCCcEE
Confidence 55689999995444 4445566777886544
No 62
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=55.74 E-value=87 Score=25.88 Aligned_cols=76 Identities=11% Similarity=0.115 Sum_probs=46.3
Q ss_pred CCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccch--H--HHHHHH
Q 029141 69 EARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG--G--TLSAAI 144 (198)
Q Consensus 69 ~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG--~--Tl~~a~ 144 (198)
-.+.-.+|..+|..||+|+.....++. ..++..+.....++|+.|.||-.....- . -+--.+
T Consensus 15 ~~~~~~la~~ia~~lg~~l~~~~~~~F--------------~dGE~~v~i~e~vrg~dv~iiqs~~~~~nd~lmell~~~ 80 (317)
T 1dku_A 15 LNSNPELAKEIADIVGVQLGKCSVTRF--------------SDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMV 80 (317)
T ss_dssp CSSCHHHHHHHHHHHTCCCCCEEEEEC--------------TTSCEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCeeEeeEEEEC--------------CCCCEEEEecCCCCCCEEEEEcCCCCCCcHHHHHHHHHH
Confidence 344558999999999998754432221 1122333334557999999988754321 1 123345
Q ss_pred HHHHhcCCeEEEEE
Q 029141 145 RLLERVGVHVVECA 158 (198)
Q Consensus 145 ~~L~~~Ga~~v~~~ 158 (198)
+.++.++++.+.++
T Consensus 81 ~a~~~~~a~~i~av 94 (317)
T 1dku_A 81 DALKRASAKTINIV 94 (317)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHhhccCcceEEEE
Confidence 56677888876554
No 63
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=53.94 E-value=27 Score=23.41 Aligned_cols=30 Identities=23% Similarity=0.214 Sum_probs=20.1
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
.++++||||||=- .......+.|++.|..+
T Consensus 5 ~~~~~ilivdd~~---~~~~~l~~~L~~~g~~v 34 (130)
T 3eod_A 5 LVGKQILIVEDEQ---VFRSLLDSWFSSLGATT 34 (130)
T ss_dssp TTTCEEEEECSCH---HHHHHHHHHHHHTTCEE
T ss_pred CCCCeEEEEeCCH---HHHHHHHHHHHhCCceE
Confidence 3677999999844 33455566677777654
No 64
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=51.64 E-value=30 Score=23.01 Aligned_cols=27 Identities=26% Similarity=0.239 Sum_probs=15.5
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
++||||||=- .......+.|++.|..+
T Consensus 3 ~~ilivdd~~---~~~~~l~~~L~~~g~~v 29 (120)
T 3f6p_A 3 KKILVVDDEK---PIADILEFNLRKEGYEV 29 (120)
T ss_dssp CEEEEECSCH---HHHHHHHHHHHHTTCEE
T ss_pred CeEEEEECCH---HHHHHHHHHHHhCCEEE
Confidence 5788888743 33344445566666543
No 65
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=49.59 E-value=33 Score=22.88 Aligned_cols=27 Identities=26% Similarity=0.267 Sum_probs=15.7
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
++||||||=- .......+.|++.|..+
T Consensus 3 ~~ILivdd~~---~~~~~l~~~l~~~g~~v 29 (122)
T 3gl9_A 3 KKVLLVDDSA---VLRKIVSFNLKKEGYEV 29 (122)
T ss_dssp CEEEEECSCH---HHHHHHHHHHHHTTCEE
T ss_pred ceEEEEeCCH---HHHHHHHHHHHHCCcEE
Confidence 5788888843 33344455566666543
No 66
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=49.18 E-value=46 Score=26.68 Aligned_cols=118 Identities=15% Similarity=0.100 Sum_probs=60.4
Q ss_pred eeecHHHhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHH-hCCCEEEEEcccCC----------CCcee
Q 029141 33 FQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALA-IGAKFVPMRKPKKL----------PGEVI 101 (198)
Q Consensus 33 ~~d~~~~~~~~~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~-L~~p~~~~rk~~~~----------~~~~~ 101 (198)
-++..+...|+.....+++.+. ..++|+|+++.+-. +..++.. -++|+++.--.... ++..+
T Consensus 45 ~~~~~~a~gd~~~~~~~~~~l~----~~~~DlIiai~t~a---a~a~~~~~~~iPVVf~~v~dp~~~~l~~~~~~~g~nv 117 (302)
T 3lkv_A 45 EFDYKTAQGNPAIAVQIARQFV----GENPDVLVGIATPT---AQALVSATKTIPIVFTAVTDPVGAKLVKQLEQPGKNV 117 (302)
T ss_dssp EEEEEECTTCHHHHHHHHHHHH----TTCCSEEEEESHHH---HHHHHHHCSSSCEEEEEESCTTTTTSCSCSSSCCSSE
T ss_pred EEEEEeCCCCHHHHHHHHHHHH----hcCCcEEEEcCCHH---HHHHHhhcCCCCeEEEecCCcchhhhcccccCCCCcE
Confidence 3456677889988777776554 45899999886533 3333332 36898775321110 01111
Q ss_pred eeeeeeccccceEEEEecccCCCCEEEEEeCcccchH--HHHHHHHHHHhcCCeEEEE
Q 029141 102 SEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG--TLSAAIRLLERVGVHVVEC 157 (198)
Q Consensus 102 ~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~--Tl~~a~~~L~~~Ga~~v~~ 157 (198)
+.........+.+++-..-.+..++|.++-|--.+++ ..+...+..++.|.+++..
T Consensus 118 tGv~~~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~~ 175 (302)
T 3lkv_A 118 TGLSDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEA 175 (302)
T ss_dssp EEEECCCCHHHHHHHHHHHSTTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEEE
Confidence 1000000001111111112356788888766544443 3445566677788776543
No 67
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=47.91 E-value=33 Score=23.44 Aligned_cols=29 Identities=24% Similarity=0.365 Sum_probs=17.1
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
++.+||||||=-. ......+.|++.|..+
T Consensus 4 ~~~~ilivdd~~~---~~~~l~~~L~~~g~~v 32 (140)
T 3h5i_A 4 KDKKILIVEDSKF---QAKTIANILNKYGYTV 32 (140)
T ss_dssp --CEEEEECSCHH---HHHHHHHHHHHTTCEE
T ss_pred CCcEEEEEeCCHH---HHHHHHHHHHHcCCEE
Confidence 4568999988443 3445556666666543
No 68
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=46.69 E-value=77 Score=26.98 Aligned_cols=72 Identities=8% Similarity=0.047 Sum_probs=44.1
Q ss_pred hHhHHH---HHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccc--hHH--HHHHHH
Q 029141 73 FIFGPP---IALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GGT--LSAAIR 145 (198)
Q Consensus 73 ~~~A~~---la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtT--G~T--l~~a~~ 145 (198)
-.+|.. +|..||+|......++. ..++..+.....++|+.|.||-..... ..- +--+++
T Consensus 39 ~~la~~~~~ia~~lg~~l~~~~~~~F--------------~dGE~~v~i~esvrg~dV~iiqs~~~~~nd~lmeLl~~id 104 (379)
T 2ji4_A 39 SSCMELSKKIAERLGVEMGKVQVYQE--------------PNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVY 104 (379)
T ss_dssp GGGGHHHHHHHHHHTCCCCCEEEEEC--------------TTSCEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhCCceEeeEEEEC--------------CCCCEEEEeCCCcCCCEEEEEeCCCCCccHHHHHHHHHHH
Confidence 467777 99999998754322211 112223333455799999999886531 222 233456
Q ss_pred HHHhcCCeEEEEE
Q 029141 146 LLERVGVHVVECA 158 (198)
Q Consensus 146 ~L~~~Ga~~v~~~ 158 (198)
.++.++|+.+.++
T Consensus 105 A~k~asA~rit~V 117 (379)
T 2ji4_A 105 ACKTSCAKSIIGV 117 (379)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHhcCCceEEEE
Confidence 7788999876644
No 69
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=44.98 E-value=52 Score=26.93 Aligned_cols=70 Identities=7% Similarity=-0.059 Sum_probs=41.3
Q ss_pred hHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccc-hHH---HHHHHHHHH
Q 029141 73 FIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---LSAAIRLLE 148 (198)
Q Consensus 73 ~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtT-G~T---l~~a~~~L~ 148 (198)
-.+|..+|..||+|+.....++. ..++..+..+.. |+.|.||--.... -.. +--.++.++
T Consensus 10 ~~la~~ia~~lg~~l~~~~~~~F--------------~dGE~~v~i~e~--g~dV~iiqs~~~p~nd~lmeLl~~ida~k 73 (286)
T 3lrt_A 10 LKLAARIAEELKTEPVMPDERRF--------------PDGELYLRYDED--LTGHNIFIIGNTHSDAEVMEMILTLSAIQ 73 (286)
T ss_dssp HHHHHHHHHHTTSCEECCEEEEC--------------TTSCEEEECCSC--CTTSEEEEECCCCSHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCeeeeEEEEC--------------CCCCEEEEEcCC--CCcEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 47999999999999854322211 112222222222 8889988755432 111 334667788
Q ss_pred hcCCeEEEEE
Q 029141 149 RVGVHVVECA 158 (198)
Q Consensus 149 ~~Ga~~v~~~ 158 (198)
++||+.+.+.
T Consensus 74 ~~~A~~it~V 83 (286)
T 3lrt_A 74 DYRTKSVNII 83 (286)
T ss_dssp GSCCSEEEEE
T ss_pred HcCCCEEEEE
Confidence 8999876554
No 70
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=44.31 E-value=36 Score=25.45 Aligned_cols=28 Identities=36% Similarity=0.528 Sum_probs=18.7
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
.++.+||||||=-. ......++|++.|.
T Consensus 59 ~~~~~ILiVdDd~~---~~~~l~~~L~~~g~ 86 (206)
T 3mm4_A 59 LRGKRVLVVDDNFI---SRKVATGKLKKMGV 86 (206)
T ss_dssp TTTCEEEEECSCHH---HHHHHHHHHHHTTC
T ss_pred cCCCEEEEEeCCHH---HHHHHHHHHHHcCC
Confidence 56789999999433 34445556666665
No 71
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=44.22 E-value=42 Score=22.36 Aligned_cols=29 Identities=38% Similarity=0.397 Sum_probs=15.8
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
++.+||||||=-. ......+.|++.|..+
T Consensus 5 ~~~~ilivdd~~~---~~~~l~~~L~~~g~~v 33 (132)
T 3lte_A 5 QSKRILVVDDDQA---MAAAIERVLKRDHWQV 33 (132)
T ss_dssp --CEEEEECSCHH---HHHHHHHHHHHTTCEE
T ss_pred CCccEEEEECCHH---HHHHHHHHHHHCCcEE
Confidence 4567888888433 3444455555666543
No 72
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=42.94 E-value=40 Score=26.32 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=32.6
Q ss_pred cccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeeh
Q 029141 133 LVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIY 183 (198)
Q Consensus 133 vvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 183 (198)
+-.+|+.+.+.++.+++.+...--++++.++++..+.++ .+.+++|++.+
T Consensus 14 ~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~-A~~~gIp~~~~ 63 (209)
T 4ds3_A 14 ISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAK-AEAAGIATQVF 63 (209)
T ss_dssp ESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHH-HHHTTCCEEEC
T ss_pred EECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHH-HHHcCCCEEEe
Confidence 456899999999999775432222445567766555544 44459999854
No 73
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=42.80 E-value=51 Score=21.00 Aligned_cols=26 Identities=12% Similarity=0.273 Sum_probs=13.0
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
++|+|+||=-.. .....+.|++.|..
T Consensus 2 ~~iliv~~~~~~---~~~l~~~l~~~g~~ 27 (119)
T 2j48_A 2 GHILLLEEEDEA---ATVVCEMLTAAGFK 27 (119)
T ss_dssp CEEEEECCCHHH---HHHHHHHHHHTTCE
T ss_pred CEEEEEeCCHHH---HHHHHHHHHhCCcE
Confidence 567777764322 33334444455543
No 74
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=42.47 E-value=51 Score=22.37 Aligned_cols=27 Identities=26% Similarity=0.191 Sum_probs=15.1
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
..+||||||=-.. .....+.|++.|..
T Consensus 4 ~~~iLivdd~~~~---~~~l~~~L~~~g~~ 30 (136)
T 3t6k_A 4 PHTLLIVDDDDTV---AEMLELVLRGAGYE 30 (136)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCEEEEEeCCHHH---HHHHHHHHHHCCCE
Confidence 3578888884333 33444555555654
No 75
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=42.36 E-value=50 Score=22.22 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=19.1
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
.++.+||||||=-.. .....+.|++.|..+
T Consensus 16 ~~~~~ilivdd~~~~---~~~l~~~L~~~g~~v 45 (137)
T 2pln_A 16 RGSMRVLLIEKNSVL---GGEIEKGLNVKGFMA 45 (137)
T ss_dssp TTCSEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCCCeEEEEeCCHHH---HHHHHHHHHHcCcEE
Confidence 577899999995444 344445555666543
No 76
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=41.99 E-value=52 Score=22.11 Aligned_cols=29 Identities=24% Similarity=0.377 Sum_probs=18.0
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
++.+||||||=-... ....+.|++.|..+
T Consensus 6 ~~~~ILivdd~~~~~---~~l~~~L~~~g~~v 34 (136)
T 1dcf_A 6 TGLKVLVMDENGVSR---MVTKGLLVHLGCEV 34 (136)
T ss_dssp TTCEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHHH---HHHHHHHHHcCCeE
Confidence 567899999954443 33444555666543
No 77
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=40.54 E-value=56 Score=22.00 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=16.9
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+..+||||||=- .......+.|++.|..
T Consensus 5 ~~~~iLivdd~~---~~~~~l~~~l~~~g~~ 32 (140)
T 3grc_A 5 PRPRILICEDDP---DIARLLNLMLEKGGFD 32 (140)
T ss_dssp CCSEEEEECSCH---HHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEcCCH---HHHHHHHHHHHHCCCe
Confidence 346788888843 3344455556666655
No 78
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=40.52 E-value=39 Score=23.11 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=20.9
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcC-CeEE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVG-VHVV 155 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~G-a~~v 155 (198)
.++.+||||||=-. ......+.|++.| ..+.
T Consensus 18 ~~~~~ilivdd~~~---~~~~l~~~L~~~g~~~v~ 49 (146)
T 4dad_A 18 QGMINILVASEDAS---RLAHLARLVGDAGRYRVT 49 (146)
T ss_dssp GGGCEEEEECSCHH---HHHHHHHHHHHHCSCEEE
T ss_pred CCCCeEEEEeCCHH---HHHHHHHHHhhCCCeEEE
Confidence 46779999999443 4455666777777 5443
No 79
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=40.47 E-value=55 Score=22.66 Aligned_cols=52 Identities=15% Similarity=0.104 Sum_probs=33.5
Q ss_pred CCCCEEEEEeCcccc-hHHHHHHHHHHHhcCCeEEE-EEEEEecCCchHHHHhhh
Q 029141 122 QAGERALIVDDLVAT-GGTLSAAIRLLERVGVHVVE-CACVIELPELKVCLKVQK 174 (198)
Q Consensus 122 ~~gk~VLIVDDvvtT-G~Tl~~a~~~L~~~Ga~~v~-~~~i~~~~~~~~~~~l~~ 174 (198)
.+|+++.++-=--.+ |.++....+.|++.|+++++ .+.+-..++... +++.+
T Consensus 77 l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~~~~~~~~p~~~d-~~~~~ 130 (138)
T 5nul_A 77 ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIVQNEPDEAE-QDCIE 130 (138)
T ss_dssp CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCEEEESSCGGGH-HHHHH
T ss_pred cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECCceEEecCCCHHH-HHHHH
Confidence 466666665421112 78899999999999999885 344445554444 55544
No 80
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=40.35 E-value=40 Score=26.39 Aligned_cols=45 Identities=22% Similarity=0.179 Sum_probs=29.4
Q ss_pred chHHHHHHHHHHHhcC--CeEEEEEEEEecCCchHHHHhhhcCCCCeeeh
Q 029141 136 TGGTLSAAIRLLERVG--VHVVECACVIELPELKVCLKVQKVIWCPNYIY 183 (198)
Q Consensus 136 TG~Tl~~a~~~L~~~G--a~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 183 (198)
+|+.+.+.++..++-. +++ ++++.++++..+. ...+..++|++.+
T Consensus 12 ~Gsnl~ali~~~~~~~l~~eI--~~Visn~~~a~v~-~~A~~~gIp~~~~ 58 (211)
T 3p9x_A 12 SGTNAEAIIQSQKAGQLPCEV--ALLITDKPGAKVV-ERVKVHEIPVCAL 58 (211)
T ss_dssp TCHHHHHHHHHHHTTCCSSEE--EEEEESCSSSHHH-HHHHTTTCCEEEC
T ss_pred CchHHHHHHHHHHcCCCCcEE--EEEEECCCCcHHH-HHHHHcCCCEEEe
Confidence 6899999999886543 444 4455677654444 4444459998753
No 81
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=40.09 E-value=50 Score=22.17 Aligned_cols=29 Identities=31% Similarity=0.353 Sum_probs=17.4
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
+..+||||||=-.. .....+.|++.|..+
T Consensus 6 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~v 34 (136)
T 3hdv_A 6 ARPLVLVVDDNAVN---REALILYLKSRGIDA 34 (136)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHHTTCCE
T ss_pred CCCeEEEECCCHHH---HHHHHHHHHHcCceE
Confidence 45689999984433 444555566666554
No 82
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=39.18 E-value=37 Score=22.28 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=31.0
Q ss_pred cCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 121 ~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
...|.+++=|++.-..|.|..++.++|++.|-++.
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~ 75 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 75 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEE
Confidence 46899999999999999999999999998877643
No 83
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=39.03 E-value=69 Score=20.77 Aligned_cols=28 Identities=32% Similarity=0.481 Sum_probs=15.2
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
+.+|+|+||=-... ....+.|++.|..+
T Consensus 2 ~~~ilivdd~~~~~---~~l~~~l~~~g~~v 29 (120)
T 1tmy_A 2 GKRVLIVDDAAFMR---MMLKDIITKAGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred CceEEEEcCcHHHH---HHHHHHHhhcCcEE
Confidence 35788888844333 33344445566553
No 84
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=38.95 E-value=57 Score=21.66 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=14.3
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
+.+||||||=-. ......+.|++.|.
T Consensus 2 ~~~ilivdd~~~---~~~~l~~~L~~~~~ 27 (140)
T 1k68_A 2 HKKIFLVEDNKA---DIRLIQEALANSTV 27 (140)
T ss_dssp CCEEEEECCCHH---HHHHHHHHHHTCSS
T ss_pred CCeEEEEeCCHH---HHHHHHHHHHhcCC
Confidence 567888887433 33344445555554
No 85
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=38.89 E-value=63 Score=21.71 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=18.9
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
.++.+||||||=-.. .....+.|++.|..
T Consensus 13 ~~~~~ilivdd~~~~---~~~l~~~L~~~g~~ 41 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSH---ATLIQYHLNQLGAE 41 (138)
T ss_dssp -CCCEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCCCeEEEECCCHHH---HHHHHHHHHHcCCE
Confidence 577899999995444 44555566666754
No 86
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=38.24 E-value=59 Score=25.43 Aligned_cols=46 Identities=15% Similarity=0.170 Sum_probs=30.6
Q ss_pred cchHHHHHHHHHHHhc-CCeEEEEEEEEecCCchHHHHhhhcCCCCeeeh
Q 029141 135 ATGGTLSAAIRLLERV-GVHVVECACVIELPELKVCLKVQKVIWCPNYIY 183 (198)
Q Consensus 135 tTG~Tl~~a~~~L~~~-Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 183 (198)
.+|+.+.+.++..++. ++++ ++++.++++..+.++ .+..++|++.+
T Consensus 14 G~Gsnl~all~~~~~~~~~eI--~~Vis~~~~a~~~~~-A~~~gIp~~~~ 60 (215)
T 3tqr_A 14 GNGTNLQAIIGAIQKGLAIEI--RAVISNRADAYGLKR-AQQADIPTHII 60 (215)
T ss_dssp SCCHHHHHHHHHHHTTCSEEE--EEEEESCTTCHHHHH-HHHTTCCEEEC
T ss_pred CCcHHHHHHHHHHHcCCCCEE--EEEEeCCcchHHHHH-HHHcCCCEEEe
Confidence 4799999999998864 3343 444566765455444 44459999863
No 87
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=37.44 E-value=41 Score=26.37 Aligned_cols=49 Identities=18% Similarity=0.204 Sum_probs=30.8
Q ss_pred ccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeeh
Q 029141 134 VATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIY 183 (198)
Q Consensus 134 vtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 183 (198)
..+|+.+.+.++.+++.+...--++++.++++..+.++-.+ .++|++.+
T Consensus 16 SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~-~gIp~~~~ 64 (215)
T 3kcq_A 16 SGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQS-YGIPTFVV 64 (215)
T ss_dssp SSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHH-TTCCEEEC
T ss_pred ECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHH-cCCCEEEe
Confidence 45789999999988765422223444566766555544444 49999853
No 88
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=36.48 E-value=72 Score=20.77 Aligned_cols=11 Identities=36% Similarity=0.507 Sum_probs=6.1
Q ss_pred CEEEEEeCccc
Q 029141 125 ERALIVDDLVA 135 (198)
Q Consensus 125 k~VLIVDDvvt 135 (198)
++|+||||=-.
T Consensus 2 ~~ilivdd~~~ 12 (124)
T 1mb3_A 2 KKVLIVEDNEL 12 (124)
T ss_dssp CEEEEECSCHH
T ss_pred cEEEEEcCCHH
Confidence 35666666433
No 89
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=36.28 E-value=51 Score=22.66 Aligned_cols=30 Identities=37% Similarity=0.413 Sum_probs=14.4
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
.++.+||||||=-.. .....+.|++.|..+
T Consensus 12 ~~~~~iLivdd~~~~---~~~l~~~L~~~g~~v 41 (143)
T 3m6m_D 12 VRSMRMLVADDHEAN---RMVLQRLLEKAGHKV 41 (143)
T ss_dssp ---CEEEEECSSHHH---HHHHHHHHHC--CEE
T ss_pred cccceEEEEeCCHHH---HHHHHHHHHHcCCeE
Confidence 355688888884333 344445555566443
No 90
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=36.16 E-value=62 Score=22.46 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=15.7
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
++.+||||||=-. ......+.|++.|..
T Consensus 6 ~~~~ILivdd~~~---~~~~l~~~L~~~g~~ 33 (154)
T 3gt7_A 6 RAGEILIVEDSPT---QAEHLKHILEETGYQ 33 (154)
T ss_dssp -CCEEEEECSCHH---HHHHHHHHHHTTTCE
T ss_pred CCCcEEEEeCCHH---HHHHHHHHHHHCCCE
Confidence 4567888888433 344445555566654
No 91
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=35.86 E-value=50 Score=21.82 Aligned_cols=25 Identities=40% Similarity=0.533 Sum_probs=13.5
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
.+||||||=-. ......+.|++.|.
T Consensus 4 ~~ilivdd~~~---~~~~l~~~L~~~g~ 28 (127)
T 3i42_A 4 QQALIVEDYQA---AAETFKELLEMLGF 28 (127)
T ss_dssp EEEEEECSCHH---HHHHHHHHHHHTTE
T ss_pred ceEEEEcCCHH---HHHHHHHHHHHcCC
Confidence 46777777333 33444445555554
No 92
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=35.70 E-value=45 Score=22.31 Aligned_cols=27 Identities=26% Similarity=0.325 Sum_probs=15.8
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+.+||||||=-. ......+.|++.|..
T Consensus 5 ~~~iLivdd~~~---~~~~l~~~L~~~g~~ 31 (129)
T 3h1g_A 5 SMKLLVVDDSST---MRRIIKNTLSRLGYE 31 (129)
T ss_dssp -CCEEEECSCHH---HHHHHHHHHHHTTCC
T ss_pred CcEEEEEeCCHH---HHHHHHHHHHHcCCc
Confidence 457888888443 344445556666654
No 93
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=35.35 E-value=76 Score=20.90 Aligned_cols=28 Identities=18% Similarity=0.054 Sum_probs=14.9
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
++.+||||||=-... ....+.|++.|..
T Consensus 4 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~ 31 (132)
T 2rdm_A 4 EAVTILLADDEAILL---LDFESTLTDAGFL 31 (132)
T ss_dssp SSCEEEEECSSHHHH---HHHHHHHHHTTCE
T ss_pred CCceEEEEcCcHHHH---HHHHHHHHHcCCE
Confidence 345788888744333 3334444455554
No 94
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=34.50 E-value=63 Score=22.31 Aligned_cols=29 Identities=21% Similarity=0.158 Sum_probs=18.1
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
.+..+||||||=- .......+.|++.|..
T Consensus 12 ~~~~~ILivdd~~---~~~~~l~~~L~~~g~~ 40 (153)
T 3hv2_A 12 TRRPEILLVDSQE---VILQRLQQLLSPLPYT 40 (153)
T ss_dssp CSCCEEEEECSCH---HHHHHHHHHHTTSSCE
T ss_pred cCCceEEEECCCH---HHHHHHHHHhcccCcE
Confidence 3556899998843 3344555666666654
No 95
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=33.57 E-value=82 Score=20.92 Aligned_cols=27 Identities=30% Similarity=0.379 Sum_probs=14.7
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+++||||||=-.. .....+.|.+.|..
T Consensus 3 ~~~ilivdd~~~~---~~~l~~~L~~~g~~ 29 (136)
T 1mvo_A 3 NKKILVVDDEESI---VTLLQYNLERSGYD 29 (136)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCEEEEEECCHHH---HHHHHHHHHHCCcE
Confidence 3578888875333 33334445555544
No 96
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=33.44 E-value=32 Score=26.81 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=23.1
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
..|++||||||- -.......+.|...|..+.
T Consensus 9 l~~~~vlvv~d~---~~~~~~l~~~L~~~g~~v~ 39 (254)
T 2ayx_A 9 LSGKRCWLAVRN---ASLCQFLETSLQRSGIVVT 39 (254)
T ss_dssp TTTEEEEEECCC---HHHHHHHHHHHTTTTEEEE
T ss_pred cCCCEEEEEcCC---HHHHHHHHHHHHHCCCEEE
Confidence 689999999994 3445556677788887764
No 97
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=33.34 E-value=77 Score=21.78 Aligned_cols=28 Identities=29% Similarity=0.485 Sum_probs=15.7
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
++.+||||||=-.. .....+.|++.|..
T Consensus 6 ~~~~iLivdd~~~~---~~~l~~~L~~~g~~ 33 (154)
T 2rjn_A 6 KNYTVMLVDDEQPI---LNSLKRLIKRLGCN 33 (154)
T ss_dssp SCCEEEEECSCHHH---HHHHHHHHHTTTCE
T ss_pred CCCeEEEEcCCHHH---HHHHHHHHHHcCCe
Confidence 45678888874333 33444455555544
No 98
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=33.22 E-value=90 Score=20.77 Aligned_cols=30 Identities=27% Similarity=0.212 Sum_probs=18.3
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
+..+||||||=-.. .....+.|++.|..++
T Consensus 8 ~~~~iLivdd~~~~---~~~l~~~L~~~g~~v~ 37 (140)
T 3cg0_A 8 DLPGVLIVEDGRLA---AATLRIQLESLGYDVL 37 (140)
T ss_dssp CCCEEEEECCBHHH---HHHHHHHHHHHTCEEE
T ss_pred CCceEEEEECCHHH---HHHHHHHHHHCCCeeE
Confidence 45689999985433 3444455556676544
No 99
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=33.20 E-value=62 Score=21.82 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=18.1
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
..+||||||=- .......+.|++.|..+.
T Consensus 6 ~~~ilivdd~~---~~~~~l~~~L~~~g~~v~ 34 (136)
T 3kto_A 6 HPIIYLVDHQK---DARAALSKLLSPLDVTIQ 34 (136)
T ss_dssp -CEEEEECSCH---HHHHHHHHHHTTSSSEEE
T ss_pred CCeEEEEcCCH---HHHHHHHHHHHHCCcEEE
Confidence 45899999843 344555566667776543
No 100
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=32.99 E-value=90 Score=20.93 Aligned_cols=30 Identities=7% Similarity=0.086 Sum_probs=18.6
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHh-cCCeEE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLER-VGVHVV 155 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~-~Ga~~v 155 (198)
...+||||||=-. ......+.|++ .|..+.
T Consensus 3 ~~~~ilivdd~~~---~~~~l~~~L~~~~~~~v~ 33 (140)
T 3lua_A 3 LDGTVLLIDYFEY---EREKTKIIFDNIGEYDFI 33 (140)
T ss_dssp CCCEEEEECSCHH---HHHHHHHHHHHHCCCEEE
T ss_pred CCCeEEEEeCCHH---HHHHHHHHHHhccCccEE
Confidence 3568999998443 34445566666 666543
No 101
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=32.88 E-value=90 Score=20.89 Aligned_cols=28 Identities=29% Similarity=0.331 Sum_probs=15.9
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+..+||||||=-. ......+.|++.|..
T Consensus 6 ~~~~iLivdd~~~---~~~~l~~~L~~~g~~ 33 (142)
T 3cg4_A 6 HKGDVMIVDDDAH---VRIAVKTILSDAGFH 33 (142)
T ss_dssp CCCEEEEECSCHH---HHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcCCHH---HHHHHHHHHHHCCeE
Confidence 4567888887433 334444555555543
No 102
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=32.72 E-value=57 Score=22.45 Aligned_cols=28 Identities=21% Similarity=0.172 Sum_probs=18.0
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
.++.+||||||= -.......+.|++.|.
T Consensus 13 ~~~~~iLivdd~---~~~~~~l~~~L~~~~~ 40 (152)
T 3eul_A 13 PEKVRVVVGDDH---PLFREGVVRALSLSGS 40 (152)
T ss_dssp -CCEEEEEECSS---HHHHHHHHHHHHHHSS
T ss_pred CceEEEEEEcCC---HHHHHHHHHHHhhCCC
Confidence 467789999994 3344555566666664
No 103
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=32.68 E-value=26 Score=28.21 Aligned_cols=46 Identities=15% Similarity=0.073 Sum_probs=31.0
Q ss_pred ccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehH
Q 029141 134 VATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYI 184 (198)
Q Consensus 134 vtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 184 (198)
+.||+|...+++.|.+...+..+ .+.. +....+.+.++ ++|++++-
T Consensus 38 LGtGST~~~~i~~L~~~~~~i~~---~V~t-S~~t~~~~~~~-Gi~l~~l~ 83 (239)
T 3uw1_A 38 VGTGSTANCFIDALAAVKDRYRG---AVSS-SVATTERLKSH-GIRVFDLN 83 (239)
T ss_dssp ECCSHHHHHHHHHHHTTGGGSCE---EEES-SHHHHHHHHHT-TCCBCCGG
T ss_pred ECccHHHHHHHHHHHhhhccceE---EeCC-cHHHHHHHHHc-CCcEEecc
Confidence 36999999999999876423221 2333 34566677665 99998753
No 104
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=32.58 E-value=12 Score=29.83 Aligned_cols=12 Identities=42% Similarity=0.537 Sum_probs=10.1
Q ss_pred eCcccchHHHHH
Q 029141 131 DDLVATGGTLSA 142 (198)
Q Consensus 131 DDvvtTG~Tl~~ 142 (198)
=|++.||+||++
T Consensus 147 vDivsTG~TLra 158 (219)
T 1o63_A 147 VDITETGRTLKE 158 (219)
T ss_dssp EEEESSSHHHHH
T ss_pred EEeeccHHHHHH
Confidence 389999999875
No 105
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=32.53 E-value=49 Score=26.38 Aligned_cols=46 Identities=13% Similarity=0.152 Sum_probs=29.6
Q ss_pred ccchHHHHHHHHHHHh----cCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehHH
Q 029141 134 VATGGTLSAAIRLLER----VGVHVVECACVIELPELKVCLKVQKVIWCPNYIYIY 185 (198)
Q Consensus 134 vtTG~Tl~~a~~~L~~----~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~ 185 (198)
+-||+|...+++.|-+ .|..+.+ +.. +...++...++ ++|+.++-.
T Consensus 27 lGTGSTv~~~i~~L~~~~~~~~l~i~~----V~t-S~~t~~~a~~~-Gi~l~~l~~ 76 (228)
T 4gmk_A 27 LGTGSTVKYMVDALGKRVNEEGLDIVG----VTT-SIRTAEQAKSL-GIVIKDIDE 76 (228)
T ss_dssp ECCSHHHHHHHHHHHHHHHHHCCCCEE----EES-SHHHHHHHHHT-TCCBCCGGG
T ss_pred ECchHHHHHHHHHHHHHHhhcCCcEEE----EeC-cHHHHHHHHHc-CCceeChHH
Confidence 5899999999998854 3444222 233 33455555555 999987643
No 106
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=32.04 E-value=12 Score=29.43 Aligned_cols=11 Identities=64% Similarity=0.848 Sum_probs=9.6
Q ss_pred CcccchHHHHH
Q 029141 132 DLVATGGTLSA 142 (198)
Q Consensus 132 DvvtTG~Tl~~ 142 (198)
|++.||+||++
T Consensus 153 DivsTG~TLra 163 (206)
T 1ve4_A 153 DVVQTGATLRA 163 (206)
T ss_dssp EEESSSHHHHH
T ss_pred EeccCHHHHHH
Confidence 89999999864
No 107
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=32.01 E-value=1.2e+02 Score=24.38 Aligned_cols=41 Identities=20% Similarity=0.134 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEE
Q 029141 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (198)
Q Consensus 50 ~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~r 91 (198)
...+.+.+.+.++|+|+. +......+..+|..+|+|.+...
T Consensus 91 ~~~l~~~l~~~~pD~Vi~-d~~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVY-DVFPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHTTCCCSEEEE-ESTTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEE-CchHHHHHHHHHHhhCCCEEEEe
Confidence 344555566678999987 31223456777889999987653
No 108
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=31.81 E-value=88 Score=24.24 Aligned_cols=47 Identities=17% Similarity=0.129 Sum_probs=29.6
Q ss_pred cchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeee
Q 029141 135 ATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYI 182 (198)
Q Consensus 135 tTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~ 182 (198)
.||+.+..+++.+.+.+-..--++++.+.+...+.++-.+. ++|++.
T Consensus 10 G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~-gIp~~~ 56 (216)
T 2ywr_A 10 GRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH-NVECKV 56 (216)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH-TCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc-CCCEEE
Confidence 57888999999998876422223444565544454444444 999884
No 109
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=31.81 E-value=1.1e+02 Score=23.66 Aligned_cols=46 Identities=20% Similarity=0.237 Sum_probs=29.8
Q ss_pred ccchHHHHHHHHHHHhc--CCeEEEEEEEEecCCchHHHHhhhcCCCCeee
Q 029141 134 VATGGTLSAAIRLLERV--GVHVVECACVIELPELKVCLKVQKVIWCPNYI 182 (198)
Q Consensus 134 vtTG~Tl~~a~~~L~~~--Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~ 182 (198)
..||+.+..+++.+.+. +.+++. ++.+.++....++ .+..++|++.
T Consensus 11 sG~g~~~~~~l~~l~~~~l~~~I~~--Vit~~~~~~v~~~-A~~~gIp~~~ 58 (212)
T 3av3_A 11 SGSGTNFQAIVDAAKRGDLPARVAL--LVCDRPGAKVIER-AARENVPAFV 58 (212)
T ss_dssp CSSCHHHHHHHHHHHTTCCCEEEEE--EEESSTTCHHHHH-HHHTTCCEEE
T ss_pred ECCcHHHHHHHHHHHhCCCCCeEEE--EEeCCCCcHHHHH-HHHcCCCEEE
Confidence 45788899999998876 445443 3456554444444 4445999985
No 110
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=31.50 E-value=73 Score=21.14 Aligned_cols=26 Identities=27% Similarity=0.391 Sum_probs=16.4
Q ss_pred EEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 126 RALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 126 ~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
+||||||=- .......+.|++.|..+
T Consensus 3 ~ilivdd~~---~~~~~l~~~L~~~g~~v 28 (134)
T 3f6c_A 3 NAIIIDDHP---LAIAAIRNLLIKNDIEI 28 (134)
T ss_dssp EEEEECCCH---HHHHHHHHHHHHTTEEE
T ss_pred EEEEEcCCH---HHHHHHHHHHhhCCcEE
Confidence 688888843 34555566667777444
No 111
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=31.40 E-value=92 Score=20.89 Aligned_cols=27 Identities=26% Similarity=0.293 Sum_probs=14.8
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
..+||||||=- .......+.|++.|..
T Consensus 4 ~~~iLivdd~~---~~~~~l~~~L~~~g~~ 30 (142)
T 2qxy_A 4 TPTVMVVDESR---ITFLAVKNALEKDGFN 30 (142)
T ss_dssp CCEEEEECSCH---HHHHHHHHHHGGGTCE
T ss_pred CCeEEEEeCCH---HHHHHHHHHHHhCCCE
Confidence 45788887743 3334444455555654
No 112
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=31.37 E-value=49 Score=26.23 Aligned_cols=54 Identities=17% Similarity=0.017 Sum_probs=35.0
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehH
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYI 184 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 184 (198)
++...++-+ .||+|....++.|.+...+... + +.. +....+.+.++ ++|++++-
T Consensus 24 V~~g~~Igl----gsGST~~~~i~~L~~~~~~itv-~--Vtn-S~~~a~~l~~~-gi~l~~l~ 77 (224)
T 3kwm_A 24 ITTEITLGV----GTGSTVGFLIEELVNYRDKIKT-V--VSS-SEDSTRKLKAL-GFDVVDLN 77 (224)
T ss_dssp CCSSEEEEE----CCSHHHHHHHHHGGGCTTTEEE-E--EES-CHHHHHHHHHT-TCCBCCHH
T ss_pred CCCCCEEEE----CCcHHHHHHHHHHHhhcCceEE-E--ECC-cHHHHHHHHHc-CCeEEecC
Confidence 444456654 5899999999999876433221 1 333 34566677775 89988753
No 113
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=31.15 E-value=87 Score=21.73 Aligned_cols=30 Identities=23% Similarity=0.278 Sum_probs=20.5
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
...+||||||= -.......+.|++.|..++
T Consensus 35 ~~~~Ilivdd~---~~~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 35 IPFNVLIVDDS---VFTVKQLTQIFTSEGFNII 64 (157)
T ss_dssp EECEEEEECSC---HHHHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEeCC---HHHHHHHHHHHHhCCCeEE
Confidence 34589999994 3445566667777787654
No 114
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=30.92 E-value=1.2e+02 Score=24.74 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEE
Q 029141 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (198)
Q Consensus 50 ~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~r 91 (198)
...+.+.+.+.++|+|+. +......+..+|..+|+|.+...
T Consensus 107 ~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 107 LRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 344555566678999994 42222345677889999997654
No 115
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=30.49 E-value=57 Score=21.75 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.5
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
.+++.|+++++ +|.....+...|++.|-+.+
T Consensus 50 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v 80 (106)
T 3hix_A 50 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHV 80 (106)
T ss_dssp CTTSCEEEECS---SHHHHHHHHHHHHHTTCSCE
T ss_pred CCCCeEEEEEC---CCChHHHHHHHHHHcCCcCE
Confidence 46778999875 78888899999999998643
No 116
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=30.45 E-value=1.2e+02 Score=19.91 Aligned_cols=27 Identities=22% Similarity=0.134 Sum_probs=13.4
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+.+|+||||=-..... ..+.|++.|..
T Consensus 3 ~~~ilivdd~~~~~~~---l~~~l~~~~~~ 29 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKS---LAFMLTMNGFA 29 (126)
T ss_dssp CCEEEEEESSHHHHHH---HHHHHHHTTCE
T ss_pred CCEEEEEcCCHHHHHH---HHHHHHhCCcE
Confidence 3567777774433332 33344444543
No 117
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=30.38 E-value=68 Score=21.80 Aligned_cols=42 Identities=10% Similarity=0.054 Sum_probs=34.3
Q ss_pred ccCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEE
Q 029141 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 161 (198)
Q Consensus 120 ~~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~ 161 (198)
.+..|..++=|++.-..|-|..++.++|++........+.++
T Consensus 46 ~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv 87 (95)
T 3gge_A 46 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLI 87 (95)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 357899999999999999999999999999765444444444
No 118
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=30.27 E-value=11 Score=29.69 Aligned_cols=18 Identities=56% Similarity=0.837 Sum_probs=13.2
Q ss_pred CcccchHHHHHHHHHHHhcCCeEEE
Q 029141 132 DLVATGGTLSAAIRLLERVGVHVVE 156 (198)
Q Consensus 132 DvvtTG~Tl~~a~~~L~~~Ga~~v~ 156 (198)
|++.||+||+ +.|-+++.
T Consensus 155 DivsTG~TLr-------~NgL~~ie 172 (208)
T 1z7m_E 155 DIVETGNTLS-------ANGLEVIE 172 (208)
T ss_dssp EEESSSHHHH-------TTTCEEEE
T ss_pred EEeCChHHHH-------HCCCEEeE
Confidence 8999999976 45566553
No 119
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=30.16 E-value=1.1e+02 Score=19.82 Aligned_cols=29 Identities=28% Similarity=0.456 Sum_probs=24.7
Q ss_pred cCCCCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 121 ~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
..+++.|++.. .+|..-..+...|++.|.
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 35778999987 688888899999999998
No 120
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=30.15 E-value=90 Score=22.49 Aligned_cols=28 Identities=29% Similarity=0.312 Sum_probs=17.3
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
.+.+||||||=-.. .....+.|++.|..
T Consensus 6 ~~~~iLivdd~~~~---~~~l~~~L~~~g~~ 33 (184)
T 3rqi_A 6 SDKNFLVIDDNEVF---AGTLARGLERRGYA 33 (184)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCCeEEEEcCCHHH---HHHHHHHHHHCCCE
Confidence 45689999995443 44445556666754
No 121
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=30.08 E-value=61 Score=22.09 Aligned_cols=26 Identities=15% Similarity=0.134 Sum_probs=15.9
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhc
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERV 150 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~ 150 (198)
.++.+|+|+||= ........+.|++.
T Consensus 11 ~~~~~vlivdd~---~~~~~~l~~~L~~~ 36 (145)
T 3kyj_B 11 GSPYNVMIVDDA---AMMRLYIASFIKTL 36 (145)
T ss_dssp CCSEEEEEECSC---HHHHHHHHHHHTTC
T ss_pred CCCCeEEEEcCC---HHHHHHHHHHHHhC
Confidence 355678888883 33444555556665
No 122
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.89 E-value=92 Score=21.39 Aligned_cols=28 Identities=25% Similarity=0.273 Sum_probs=16.2
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
+.+||||||=-.. .....+.|++.|..+
T Consensus 3 ~~~ILivdd~~~~---~~~l~~~L~~~g~~v 30 (155)
T 1qkk_A 3 APSVFLIDDDRDL---RKAMQQTLELAGFTV 30 (155)
T ss_dssp -CEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCEEEEEeCCHHH---HHHHHHHHHHcCcEE
Confidence 4578888885433 344445555666543
No 123
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=29.88 E-value=68 Score=25.88 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=30.0
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~ 165 (198)
.+|+++|| +-+|++.++++-.|.+.|+..+. ++++..
T Consensus 123 ~~~~~~li----lGaGGaarai~~aL~~~g~~~i~---i~nRt~ 159 (269)
T 3tum_A 123 PAGKRALV----IGCGGVGSAIAYALAEAGIASIT---LCDPST 159 (269)
T ss_dssp CTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEE---EECSCH
T ss_pred cccCeEEE----EecHHHHHHHHHHHHHhCCCeEE---EeCCCH
Confidence 68899997 57899999999999999987644 446653
No 124
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=29.25 E-value=63 Score=22.99 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=26.1
Q ss_pred cCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 121 ~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
..+++.|+++++ +|.....+...|++.|-+.+
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v 84 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHV 84 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCE
Confidence 357788999876 78888899999999998644
No 125
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=29.11 E-value=85 Score=19.73 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=25.8
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 156 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~ 156 (198)
.+++.|+++.+ +|.....+...|++.|-+.+.
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~ 70 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVE 70 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEE
Confidence 57788999885 688888899999999986543
No 126
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=28.85 E-value=42 Score=26.61 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=29.8
Q ss_pred cchHHHHHHHHHHHhc----CCeEEEEEEEEecCCchHHHHhhhcCCCCeeehH
Q 029141 135 ATGGTLSAAIRLLERV----GVHVVECACVIELPELKVCLKVQKVIWCPNYIYI 184 (198)
Q Consensus 135 tTG~Tl~~a~~~L~~~----Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 184 (198)
.||+|...+++.|.+. +.+.. .+.. +....+.+.++ ++|++++-
T Consensus 25 GsGST~~~~i~~L~~~~~~~~~~i~----~Vtt-S~~t~~~l~~~-Gi~l~~l~ 72 (225)
T 3l7o_A 25 GTGSTAYYFVEEVGRRVQEEGLQVI----GVTT-SSRTTAQAQAL-GIPLKSID 72 (225)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCCCCE----EEES-SHHHHHHHHHH-TCCBCCGG
T ss_pred CCcHHHHHHHHHHHHhhhhcCCCEE----EEcC-CHHHHHHHhcc-CceEEecC
Confidence 6899999999999775 43322 2333 33556667666 99988753
No 127
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=28.56 E-value=65 Score=24.98 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=28.9
Q ss_pred cchHHHHHHHHHHHhc--CCeEEEEEEEEecCCchHHHHhhhcCCCCeee
Q 029141 135 ATGGTLSAAIRLLERV--GVHVVECACVIELPELKVCLKVQKVIWCPNYI 182 (198)
Q Consensus 135 tTG~Tl~~a~~~L~~~--Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~ 182 (198)
.+|+++++.++.+++. +.+++.+ +.+.+...+.++-.+ .++|++.
T Consensus 9 G~Gs~L~aLi~~~~~~~~~~~I~~V--vs~~~~~~~~~~A~~-~gIp~~~ 55 (209)
T 1meo_A 9 GTGSNLQALIDSTREPNSSAQIDIV--ISNKAAVAGLDKAER-AGIPTRV 55 (209)
T ss_dssp SSCTTHHHHHHHHHSTTCSCEEEEE--EESSTTCHHHHHHHH-TTCCEEE
T ss_pred CCchHHHHHHHHHhcCCCCcEEEEE--EeCCCChHHHHHHHH-cCCCEEE
Confidence 4788899999887764 4555443 345554455544444 4999974
No 128
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=28.50 E-value=76 Score=21.23 Aligned_cols=29 Identities=7% Similarity=0.016 Sum_probs=19.2
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcC-CeE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVG-VHV 154 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~G-a~~ 154 (198)
...+||||||=-. ......+.|++.| ..+
T Consensus 13 ~~~~ilivdd~~~---~~~~l~~~L~~~g~~~v 42 (135)
T 3snk_A 13 KRKQVALFSSDPN---FKRDVATRLDALAIYDV 42 (135)
T ss_dssp CCEEEEEECSCHH---HHHHHHHHHHHTSSEEE
T ss_pred CCcEEEEEcCCHH---HHHHHHHHHhhcCCeEE
Confidence 4568999999544 4455566677777 443
No 129
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=27.14 E-value=78 Score=24.56 Aligned_cols=46 Identities=11% Similarity=-0.021 Sum_probs=29.6
Q ss_pred cchHHHHHHHHHHHhc--CCeEEEEEEEEecCCchHHHHhhhcCCCCeeeh
Q 029141 135 ATGGTLSAAIRLLERV--GVHVVECACVIELPELKVCLKVQKVIWCPNYIY 183 (198)
Q Consensus 135 tTG~Tl~~a~~~L~~~--Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 183 (198)
.+|+.+.+.++.+++. +.+++.+ +.+.++..+.++-.+ .++|++.+
T Consensus 9 g~gsnl~ali~~~~~~~~~~~i~~V--is~~~~~~~~~~A~~-~gIp~~~~ 56 (212)
T 1jkx_A 9 GNGSNLQAIIDACKTNKIKGTVRAV--FSNKADAFGLERARQ-AGIATHTL 56 (212)
T ss_dssp SCCHHHHHHHHHHHTTSSSSEEEEE--EESCTTCHHHHHHHH-TTCEEEEC
T ss_pred CCcHHHHHHHHHHHcCCCCceEEEE--EeCCCchHHHHHHHH-cCCcEEEe
Confidence 4678899999988776 4555444 456554445444444 49998863
No 130
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=27.08 E-value=85 Score=21.08 Aligned_cols=12 Identities=25% Similarity=0.376 Sum_probs=7.4
Q ss_pred CEEEEEeCcccc
Q 029141 125 ERALIVDDLVAT 136 (198)
Q Consensus 125 k~VLIVDDvvtT 136 (198)
.+||||||=-..
T Consensus 3 ~~ILivdD~~~~ 14 (133)
T 2r25_B 3 VKILVVEDNHVN 14 (133)
T ss_dssp SCEEEECSCHHH
T ss_pred ceEEEEcCCHHH
Confidence 357777775443
No 131
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=26.92 E-value=1.5e+02 Score=20.03 Aligned_cols=43 Identities=23% Similarity=0.261 Sum_probs=28.8
Q ss_pred CCCCEEEEEeCccc-chHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 029141 122 QAGERALIVDDLVA-TGGTLSAAIRLLERVGVHVVECACVIELP 164 (198)
Q Consensus 122 ~~gk~VLIVDDvvt-TG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~ 164 (198)
.+|+++.++-=--. .|.++....+.|++.|++++..+.+-..+
T Consensus 78 l~~k~~~~~~t~g~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~ 121 (137)
T 2fz5_A 78 LKGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATVIGTAIVNEMP 121 (137)
T ss_dssp CSSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEEEEESSS
T ss_pred cCCCEEEEEEecCCCCchHHHHHHHHHHHCCCEEcCcEEEeeCC
Confidence 45666665542111 36789999999999999988665554444
No 132
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=26.85 E-value=1.1e+02 Score=19.69 Aligned_cols=26 Identities=27% Similarity=0.263 Sum_probs=13.9
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
.+||||||=-.. .....+.|++.|..
T Consensus 6 ~~ilivdd~~~~---~~~l~~~L~~~g~~ 31 (127)
T 2gkg_A 6 KKILIVESDTAL---SATLRSALEGRGFT 31 (127)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHHTCE
T ss_pred CeEEEEeCCHHH---HHHHHHHHHhcCce
Confidence 467888774333 33444445555554
No 133
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=26.83 E-value=91 Score=26.19 Aligned_cols=47 Identities=13% Similarity=-0.031 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEE
Q 029141 44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (198)
Q Consensus 44 ~~~~~i~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~ 90 (198)
+....+...+.+.+.+.+||+|+........++...|...++|++..
T Consensus 77 ~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 77 KSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 33334444444555566899999987554555556677889998654
No 134
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=26.46 E-value=1.3e+02 Score=19.20 Aligned_cols=25 Identities=28% Similarity=0.263 Sum_probs=12.4
Q ss_pred EEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 126 RALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 126 ~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+|+|+||=-..... ..+.|++.|..
T Consensus 3 ~ilivdd~~~~~~~---l~~~l~~~~~~ 27 (116)
T 3a10_A 3 RILVVDDEPNIREL---LKEELQEEGYE 27 (116)
T ss_dssp EEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred EEEEEeCCHHHHHH---HHHHHHHCCCE
Confidence 67777774433332 33344445543
No 135
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=26.27 E-value=1.1e+02 Score=20.32 Aligned_cols=8 Identities=50% Similarity=0.742 Sum_probs=4.2
Q ss_pred CEEEEEeC
Q 029141 125 ERALIVDD 132 (198)
Q Consensus 125 k~VLIVDD 132 (198)
.+||||||
T Consensus 4 ~~ilivdd 11 (140)
T 2qr3_A 4 GTIIIVDD 11 (140)
T ss_dssp CEEEEECS
T ss_pred ceEEEEeC
Confidence 34555555
No 136
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=25.85 E-value=82 Score=22.83 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=20.8
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 156 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~ 156 (198)
++.+||||||=-.....+ .+.|++.|..++.
T Consensus 11 ~~~~iLivdd~~~~~~~l---~~~L~~~g~~v~~ 41 (196)
T 1qo0_D 11 RELQVLVLNPPGEVSDAL---VLQLIRIGCSVRQ 41 (196)
T ss_dssp GGCEEEEESCTTHHHHHH---HHHHHHHTCEEEE
T ss_pred cCCeEEEEcCChhHHHHH---HHHHHHcCCeEEE
Confidence 566899999976655444 4455567776654
No 137
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=25.57 E-value=1.3e+02 Score=20.03 Aligned_cols=25 Identities=32% Similarity=0.328 Sum_probs=12.7
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
.+||||||=- .......+.|++.|.
T Consensus 4 ~~ilivdd~~---~~~~~l~~~l~~~g~ 28 (143)
T 3jte_A 4 AKILVIDDES---TILQNIKFLLEIDGN 28 (143)
T ss_dssp CEEEEECSCH---HHHHHHHHHHHHTTC
T ss_pred CEEEEEcCCH---HHHHHHHHHHHhCCc
Confidence 4677777632 333344444555554
No 138
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=25.40 E-value=20 Score=29.76 Aligned_cols=11 Identities=55% Similarity=0.679 Sum_probs=9.7
Q ss_pred CcccchHHHHH
Q 029141 132 DLVATGGTLSA 142 (198)
Q Consensus 132 DvvtTG~Tl~~ 142 (198)
|++.||+||++
T Consensus 160 DivsTG~TLra 170 (289)
T 2vd3_A 160 DLSSTGTTLRM 170 (289)
T ss_dssp EEESSTHHHHH
T ss_pred EEeCChHHHHH
Confidence 89999999874
No 139
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=25.40 E-value=1.4e+02 Score=19.09 Aligned_cols=25 Identities=24% Similarity=0.246 Sum_probs=12.5
Q ss_pred EEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 126 RALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 126 ~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+|+||||=-... ....+.|.+.|..
T Consensus 3 ~ilivdd~~~~~---~~l~~~l~~~~~~ 27 (120)
T 2a9o_A 3 KILIVDDEKPIS---DIIKFNMTKEGYE 27 (120)
T ss_dssp EEEEECSCHHHH---HHHHHHHHHTTCE
T ss_pred eEEEEcCCHHHH---HHHHHHHHhcCcE
Confidence 677777743332 2333444455543
No 140
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=25.37 E-value=64 Score=21.97 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=23.4
Q ss_pred CCC-CEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 122 QAG-ERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 122 ~~g-k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
.++ +.|++.++ .+|..-..+...|++.|-
T Consensus 86 ~~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~ 115 (134)
T 3g5j_A 86 ALNYDNIVIYCA--RGGMRSGSIVNLLSSLGV 115 (134)
T ss_dssp HTTCSEEEEECS--SSSHHHHHHHHHHHHTTC
T ss_pred ccCCCeEEEEEC--CCChHHHHHHHHHHHcCC
Confidence 355 88998865 578777889999999998
No 141
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=24.98 E-value=1.3e+02 Score=19.96 Aligned_cols=28 Identities=18% Similarity=0.125 Sum_probs=14.8
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHh-cCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLER-VGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~-~Ga~ 153 (198)
.+.+||||||=-.. .....+.|++ .|..
T Consensus 7 ~~~~iLivdd~~~~---~~~l~~~L~~~~~~~ 35 (143)
T 3cnb_A 7 NDFSILIIEDDKEF---ADMLTQFLENLFPYA 35 (143)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHHHHCTTC
T ss_pred CCceEEEEECCHHH---HHHHHHHHHhccCcc
Confidence 45678888884333 3334444555 5555
No 142
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=24.96 E-value=1.4e+02 Score=19.24 Aligned_cols=26 Identities=27% Similarity=0.397 Sum_probs=15.3
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
.+|+||||=-.....+ .+.|++.|..
T Consensus 3 ~~ilivdd~~~~~~~l---~~~l~~~g~~ 28 (127)
T 2jba_A 3 RRILVVEDEAPIREMV---CFVLEQNGFQ 28 (127)
T ss_dssp CEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred cEEEEEcCCHHHHHHH---HHHHHHCCce
Confidence 4788888865444333 3445556654
No 143
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=24.71 E-value=92 Score=25.68 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=28.8
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~ 164 (198)
.+|++++|+ -+|++-++++..|.+.|++.+. ++++.
T Consensus 146 l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~---v~nRt 181 (312)
T 3t4e_A 146 MRGKTMVLL----GAGGAATAIGAQAAIEGIKEIK---LFNRK 181 (312)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEE---EEECS
T ss_pred cCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEE---EEECC
Confidence 579999985 5799999999999999986543 34664
No 144
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=24.56 E-value=20 Score=29.89 Aligned_cols=11 Identities=73% Similarity=0.966 Sum_probs=9.7
Q ss_pred CcccchHHHHH
Q 029141 132 DLVATGGTLSA 142 (198)
Q Consensus 132 DvvtTG~Tl~~ 142 (198)
|++.||+||++
T Consensus 169 DivsTG~TLra 179 (299)
T 1h3d_A 169 DLVSTGATLEA 179 (299)
T ss_dssp EEESSCHHHHH
T ss_pred ecccCHHHHHH
Confidence 89999999875
No 145
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=24.33 E-value=98 Score=20.63 Aligned_cols=29 Identities=21% Similarity=0.468 Sum_probs=24.6
Q ss_pred cCCCCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 121 ~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
..+++.|++.. .+|..-..+...|++.|-
T Consensus 52 l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 52 LERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp SCTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 35778899988 588888899999999998
No 146
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=24.22 E-value=1.7e+02 Score=24.06 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=27.1
Q ss_pred HHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEE
Q 029141 51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (198)
Q Consensus 51 ~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~r 91 (198)
..+.+.+.+..+|+||+-.. ...+..+|+.+|+|.+...
T Consensus 99 ~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 99 PQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEEe
Confidence 34444555568999998653 3457788999999987653
No 147
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.11 E-value=1e+02 Score=20.71 Aligned_cols=28 Identities=29% Similarity=0.526 Sum_probs=17.2
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
+..+||||||= ........+.|++.|..
T Consensus 4 ~~~~ILivdd~---~~~~~~l~~~L~~~~~~ 31 (144)
T 3kht_A 4 RSKRVLVVEDN---PDDIALIRRVLDRKDIH 31 (144)
T ss_dssp -CEEEEEECCC---HHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEeCC---HHHHHHHHHHHHhcCCC
Confidence 34678999883 33445555666666654
No 148
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=23.93 E-value=1.5e+02 Score=19.21 Aligned_cols=9 Identities=67% Similarity=0.914 Sum_probs=5.7
Q ss_pred CEEEEEeCc
Q 029141 125 ERALIVDDL 133 (198)
Q Consensus 125 k~VLIVDDv 133 (198)
.+||||||=
T Consensus 4 ~~ilivdd~ 12 (124)
T 1srr_A 4 EKILIVDDQ 12 (124)
T ss_dssp CEEEEECSC
T ss_pred ceEEEEeCC
Confidence 367777764
No 149
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=23.52 E-value=21 Score=29.77 Aligned_cols=12 Identities=50% Similarity=0.714 Sum_probs=10.1
Q ss_pred eCcccchHHHHH
Q 029141 131 DDLVATGGTLSA 142 (198)
Q Consensus 131 DDvvtTG~Tl~~ 142 (198)
=|++.||+||++
T Consensus 173 vDiVsTG~TLra 184 (304)
T 1nh8_A 173 ADVVGSGRTLSQ 184 (304)
T ss_dssp EEEESSSHHHHH
T ss_pred EEEeCChHHHHH
Confidence 389999999875
No 150
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=23.38 E-value=1.3e+02 Score=23.52 Aligned_cols=53 Identities=9% Similarity=-0.041 Sum_probs=33.0
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhc--CCeEEEEEEEEecCCchHHHHhhhcCCCCeee
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERV--GVHVVECACVIELPELKVCLKVQKVIWCPNYI 182 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~--Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~ 182 (198)
.||+++ +..||+.+..+++.+.+. +.+++. ++.++++..+.+ ..+..++|++.
T Consensus 23 ~rI~~l--~SG~g~~~~~~l~~l~~~~~~~~I~~--Vvt~~~~~~~~~-~A~~~gIp~~~ 77 (229)
T 3auf_A 23 IRIGVL--ISGSGTNLQAILDGCREGRIPGRVAV--VISDRADAYGLE-RARRAGVDALH 77 (229)
T ss_dssp EEEEEE--ESSCCHHHHHHHHHHHTTSSSEEEEE--EEESSTTCHHHH-HHHHTTCEEEE
T ss_pred cEEEEE--EeCCcHHHHHHHHHHHhCCCCCeEEE--EEcCCCchHHHH-HHHHcCCCEEE
Confidence 366653 125788999999999876 445443 345655544444 44445999874
No 151
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=23.26 E-value=2.1e+02 Score=23.44 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=27.5
Q ss_pred HHHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEEE
Q 029141 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (198)
Q Consensus 50 ~~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~r 91 (198)
...+.+.+.+.++|+|++-.. + ..+..+|+.+|+|.+...
T Consensus 93 ~~~l~~~l~~~~pD~Vi~d~~-~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 93 LPQLADAYADDIPDLVLHDIT-S-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHTTSCCSEEEEETT-C-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhccCCCEEEECCc-c-HHHHHHHHHcCCCEEEEe
Confidence 344445555678999997433 3 367788899999987654
No 152
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=23.07 E-value=1.5e+02 Score=19.76 Aligned_cols=11 Identities=36% Similarity=0.353 Sum_probs=6.4
Q ss_pred CEEEEEeCccc
Q 029141 125 ERALIVDDLVA 135 (198)
Q Consensus 125 k~VLIVDDvvt 135 (198)
.+||||||=-.
T Consensus 4 ~~ILivdd~~~ 14 (138)
T 3c3m_A 4 YTILVVDDSPM 14 (138)
T ss_dssp CEEEEECSCHH
T ss_pred ceEEEEeCCHH
Confidence 35777776433
No 153
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=22.94 E-value=1.1e+02 Score=20.41 Aligned_cols=27 Identities=41% Similarity=0.514 Sum_probs=14.0
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
.+.+||||||=-.. .....+.|++.|.
T Consensus 5 ~~~~iLivdd~~~~---~~~l~~~L~~~g~ 31 (149)
T 1k66_A 5 ATQPLLVVEDSDED---FSTFQRLLQREGV 31 (149)
T ss_dssp TTSCEEEECCCHHH---HHHHHHHHHHTTB
T ss_pred CCccEEEEECCHHH---HHHHHHHHHHcCC
Confidence 45678888874333 3333344444443
No 154
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=22.93 E-value=1.6e+02 Score=21.39 Aligned_cols=29 Identities=24% Similarity=0.314 Sum_probs=17.9
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
..+||||||=-.. .....+.|.+.|..++
T Consensus 13 ~~~iLivdd~~~~---~~~l~~~L~~~g~~v~ 41 (205)
T 1s8n_A 13 PRRVLIAEDEALI---RMDLAEMLREEGYEIV 41 (205)
T ss_dssp CCEEEEECSSHHH---HHHHHHHHHHTTCEEE
T ss_pred CccEEEEECCHHH---HHHHHHHHHHCCCEEE
Confidence 3589999995443 3344455556676654
No 155
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=22.72 E-value=1.4e+02 Score=19.91 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=25.5
Q ss_pred cCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 121 ~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
..+++.|+++- .+|..-..+++.|++.|-+.+
T Consensus 53 l~~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~ 84 (103)
T 3iwh_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEEE
T ss_pred hcCCCeEEEEC---CCCHHHHHHHHHHHHcCCCEE
Confidence 46788888875 578877888999999998754
No 156
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=22.52 E-value=1.4e+02 Score=23.71 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=21.2
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
.+.+||+|||--. ......+.|++.|..++
T Consensus 159 l~~rILvVdD~~~---~~~~l~~~L~~~g~~v~ 188 (286)
T 3n0r_A 159 LATEVLIIEDEPV---IAADIEALVRELGHDVT 188 (286)
T ss_dssp CCCEEEEECCSHH---HHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEcCCHH---HHHHHHHHhhccCceEE
Confidence 4678999999443 34556677778887765
No 157
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=22.46 E-value=1.6e+02 Score=18.85 Aligned_cols=8 Identities=50% Similarity=0.821 Sum_probs=4.6
Q ss_pred EEEEEeCc
Q 029141 126 RALIVDDL 133 (198)
Q Consensus 126 ~VLIVDDv 133 (198)
+|+||||=
T Consensus 2 ~ilivdd~ 9 (121)
T 2pl1_A 2 RVLVVEDN 9 (121)
T ss_dssp EEEEECSC
T ss_pred eEEEEeCc
Confidence 46666663
No 158
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.43 E-value=94 Score=24.36 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=26.2
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
.+|++|||| -.|......++.|.++|+++.
T Consensus 29 L~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 29 LKGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp CTTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred cCCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 789999985 679999999999999999753
No 159
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=22.18 E-value=68 Score=25.81 Aligned_cols=48 Identities=13% Similarity=0.025 Sum_probs=36.6
Q ss_pred cchHHHHHHHHHHHhcCCeEEEEEEEEecCCchHHHHhhhcCCCCeeehHH
Q 029141 135 ATGGTLSAAIRLLERVGVHVVECACVIELPELKVCLKVQKVIWCPNYIYIY 185 (198)
Q Consensus 135 tTG~Tl~~a~~~L~~~Ga~~v~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~ 185 (198)
..+..+.++++.|++.|++-+-++ |+.. +.+.+.+.+.+++|+...+.
T Consensus 83 ~~~~~l~~~~~~L~~~Gad~IVIa--CNTa-h~~l~~lr~~~~iPvigiie 130 (268)
T 3s81_A 83 SPYRYLERYLHMLEDAGAECIVIP--CNTA-HYWFDDLQNVAKARMISILD 130 (268)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEECS--CSGG-GGGHHHHHHHCSSEEECHHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEe--CCCH-HHHHHHHHHHCCCCEEcccH
Confidence 457789999999999999865554 4543 24788898888999987654
No 160
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=22.05 E-value=1.2e+02 Score=24.79 Aligned_cols=38 Identities=13% Similarity=-0.092 Sum_probs=25.0
Q ss_pred HHHHHHhcCCCccEEEeeCCcchHhHHHHHHHhCCCEEEE
Q 029141 51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (198)
Q Consensus 51 ~~La~~l~~~~~d~Iv~v~~gG~~~A~~la~~L~~p~~~~ 90 (198)
..+.+.+.+.+||+|++-. ....+...|+.+++|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 3344444455899998863 3344667788899998764
No 161
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=21.82 E-value=1.5e+02 Score=21.40 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=14.7
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
..+||||||=-.. .....+.|++.|..
T Consensus 4 ~~~ilivdd~~~~---~~~l~~~L~~~g~~ 30 (208)
T 1yio_A 4 KPTVFVVDDDMSV---REGLRNLLRSAGFE 30 (208)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHHTTTCE
T ss_pred CCEEEEEcCCHHH---HHHHHHHHHhCCce
Confidence 4478888875443 33334444555544
No 162
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=21.81 E-value=74 Score=21.11 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=24.9
Q ss_pred CCCCEEEEEeCcccchHHHHHHHHHHHhcCCeEE
Q 029141 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (198)
Q Consensus 122 ~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~v 155 (198)
.+++.|++..+ +|.....+...|++.|-+.+
T Consensus 56 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v 86 (108)
T 1gmx_A 56 DFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVV 86 (108)
T ss_dssp CTTSCEEEECS---SSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCCEEEEcC---CCchHHHHHHHHHHcCCceE
Confidence 57788999876 67777888999999998643
No 163
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=21.75 E-value=1.3e+02 Score=19.28 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=30.6
Q ss_pred cCCCCEEEEEeCcccchHHHHHHHHHHHhcCCeE
Q 029141 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (198)
Q Consensus 121 ~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~~ 154 (198)
+..|..|+=|++.-.+|.|...+.+++++.+..+
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v 73 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGKL 73 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 5789999999999999999999999999988754
No 164
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=21.63 E-value=1.7e+02 Score=24.41 Aligned_cols=82 Identities=13% Similarity=0.065 Sum_probs=48.7
Q ss_pred ccEEEeeCCcchHhHHHHHHHhCCCEEEEEcccCCCCceeeeeeeeccccceEEEEecccCCCCEEEEEeCcccchHHHH
Q 029141 62 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLS 141 (198)
Q Consensus 62 ~d~Iv~v~~gG~~~A~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VLIVDDvvtTG~Tl~ 141 (198)
+|+|+--... -.....+|...++|++...-....+.+....-+... +. ....+|.+|.+|=|. +++.+
T Consensus 104 ~D~iviR~~~-~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~---e~-----~g~l~glkva~vGD~---~rva~ 171 (323)
T 3gd5_A 104 VDGLAIRTFA-QTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIR---EN-----FGRLAGLKLAYVGDG---NNVAH 171 (323)
T ss_dssp CSEEEEECSS-HHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHH---HH-----HSCCTTCEEEEESCC---CHHHH
T ss_pred CCEEEEecCC-hhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH---HH-----hCCCCCCEEEEECCC---CcHHH
Confidence 6766643321 234467788889998876532111111111001000 00 012689999999998 88999
Q ss_pred HHHHHHHhcCCeEE
Q 029141 142 AAIRLLERVGVHVV 155 (198)
Q Consensus 142 ~a~~~L~~~Ga~~v 155 (198)
..+.++...|+++.
T Consensus 172 Sl~~~~~~~G~~v~ 185 (323)
T 3gd5_A 172 SLLLGCAKVGMSIA 185 (323)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCEEE
Confidence 99999999998743
No 165
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=21.50 E-value=1.8e+02 Score=19.14 Aligned_cols=26 Identities=38% Similarity=0.388 Sum_probs=13.3
Q ss_pred CEEEEEeCcccchHHHHHHHHHHHhcCCe
Q 029141 125 ERALIVDDLVATGGTLSAAIRLLERVGVH 153 (198)
Q Consensus 125 k~VLIVDDvvtTG~Tl~~a~~~L~~~Ga~ 153 (198)
.+||||||=-.....+ .+.|++.|..
T Consensus 4 ~~Ilivdd~~~~~~~l---~~~L~~~g~~ 29 (132)
T 3crn_A 4 KRILIVDDDTAILDST---KQILEFEGYE 29 (132)
T ss_dssp CEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred cEEEEEeCCHHHHHHH---HHHHHHCCce
Confidence 4677777754443333 3334445543
No 166
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=21.47 E-value=1.5e+02 Score=20.20 Aligned_cols=26 Identities=15% Similarity=0.282 Sum_probs=13.1
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
..+||||||=-. ......+.|++.|.
T Consensus 4 ~~~ILivddd~~---~~~~l~~~L~~~g~ 29 (152)
T 3heb_A 4 SVTIVMIEDDLG---HARLIEKNIRRAGV 29 (152)
T ss_dssp -CEEEEECCCHH---HHHHHHHHHHHTTC
T ss_pred CceEEEEeCCHH---HHHHHHHHHHhCCC
Confidence 347888887322 23333444444444
No 167
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=21.39 E-value=1.2e+02 Score=20.24 Aligned_cols=27 Identities=11% Similarity=-0.017 Sum_probs=14.0
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhcCC
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERVGV 152 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~Ga 152 (198)
+..+||||||=- .......+.|++.|.
T Consensus 8 ~~~~iLivdd~~---~~~~~l~~~l~~~~~ 34 (146)
T 3ilh_A 8 KIDSVLLIDDDD---IVNFLNTTIIRMTHR 34 (146)
T ss_dssp CEEEEEEECSCH---HHHHHHHHHHHTTCC
T ss_pred ccceEEEEeCCH---HHHHHHHHHHHhcCC
Confidence 345788888742 223334444455554
No 168
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=21.15 E-value=1.7e+02 Score=18.73 Aligned_cols=11 Identities=36% Similarity=0.437 Sum_probs=6.2
Q ss_pred EEEEEeCcccc
Q 029141 126 RALIVDDLVAT 136 (198)
Q Consensus 126 ~VLIVDDvvtT 136 (198)
+||||||=-..
T Consensus 4 ~ilivdd~~~~ 14 (122)
T 1zgz_A 4 HIVIVEDEPVT 14 (122)
T ss_dssp EEEEECSSHHH
T ss_pred EEEEEECCHHH
Confidence 56666664433
No 169
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=21.12 E-value=1.4e+02 Score=19.59 Aligned_cols=25 Identities=28% Similarity=0.232 Sum_probs=14.6
Q ss_pred CCEEEEEeCcccchHHHHHHHHHHHhcC
Q 029141 124 GERALIVDDLVATGGTLSAAIRLLERVG 151 (198)
Q Consensus 124 gk~VLIVDDvvtTG~Tl~~a~~~L~~~G 151 (198)
..+||||||=-.. .....+.|++.|
T Consensus 3 ~~~ilivdd~~~~---~~~l~~~L~~~~ 27 (135)
T 3eqz_A 3 LNRVFIVDDDTLT---CNLLKTIVEPIF 27 (135)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHTTTC
T ss_pred cceEEEEeCCHHH---HHHHHHHHHhhc
Confidence 4688999884443 344444555554
No 170
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.88 E-value=1e+02 Score=20.68 Aligned_cols=31 Identities=13% Similarity=0.326 Sum_probs=28.8
Q ss_pred cCCCCEEEEEeCcccchHHHHHHHHHHHhcC
Q 029141 121 VQAGERALIVDDLVATGGTLSAAIRLLERVG 151 (198)
Q Consensus 121 ~~~gk~VLIVDDvvtTG~Tl~~a~~~L~~~G 151 (198)
+..|.+|+=||+.-.++.|..++.++|++.+
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 5789999999999999999999999999987
No 171
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=20.85 E-value=1.8e+02 Score=19.32 Aligned_cols=29 Identities=14% Similarity=0.211 Sum_probs=15.2
Q ss_pred CCCEEEEEeCcccchHHHHHHHHHHHhc-CCeE
Q 029141 123 AGERALIVDDLVATGGTLSAAIRLLERV-GVHV 154 (198)
Q Consensus 123 ~gk~VLIVDDvvtTG~Tl~~a~~~L~~~-Ga~~ 154 (198)
...+||||||=-... ....+.|++. |..+
T Consensus 8 ~~~~iLivdd~~~~~---~~l~~~L~~~~~~~~ 37 (143)
T 2qv0_A 8 EKMKVIIVEDEFLAQ---QELSWLINTHSQMEI 37 (143)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHHHHSCCEE
T ss_pred CceEEEEEcCCHHHH---HHHHHHHHhCCCceE
Confidence 345799999854443 3344445544 4443
No 172
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=20.04 E-value=1.4e+02 Score=19.33 Aligned_cols=12 Identities=33% Similarity=0.509 Sum_probs=7.4
Q ss_pred CCEEEEEeCccc
Q 029141 124 GERALIVDDLVA 135 (198)
Q Consensus 124 gk~VLIVDDvvt 135 (198)
+.+|+|+||=-.
T Consensus 4 ~~~ilivdd~~~ 15 (128)
T 1jbe_A 4 ELKFLVVDDFST 15 (128)
T ss_dssp TCCEEEECSCHH
T ss_pred ccEEEEECCCHH
Confidence 346788877433
Done!