BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029142
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2
PE=1 SV=2
Length = 274
Score = 361 bits (926), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/199 (86%), Positives = 190/199 (95%), Gaps = 1/199 (0%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
MAPNIYCCGAGTAADTEAVTDMVSSQL+LHRY TGR+SRVVTALTLLKKHLF+YQG+V A
Sbjct: 76 MAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSA 135
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
ALVLGGVD TGPHLHTIYPHGSTDTLPFATMGSGSLAAM++FE+KYKEGLT+DEGI+LV
Sbjct: 136 ALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVA 195
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKI 180
+AICSGIFNDLGSGSNVD+CVITKGHKEYLRN++ PNPRT+V++KGYSF KKTEVLLTKI
Sbjct: 196 EAICSGIFNDLGSGSNVDICVITKGHKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKI 255
Query: 181 TPLRERVEVVE-GGDAMEE 198
TPL ERVE+VE G+AMEE
Sbjct: 256 TPLLERVEIVEVAGEAMEE 274
>sp|O23710|PSB7A_ARATH Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1
PE=1 SV=2
Length = 273
Score = 358 bits (920), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 168/198 (84%), Positives = 189/198 (95%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
MAPNIYCCGAGTAADTEAVTDMVSSQL+LHRY TGR+SRV+TALTLLKKHLF+YQG+V A
Sbjct: 76 MAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSA 135
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
ALVLGGVD TGPHLHTIYPHGSTDTLPFATMGSGSLAAM++FE+KYKEGLT+DEGI+LV
Sbjct: 136 ALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVA 195
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKI 180
++ICSGIFNDLGSGSNVD+CVITKG+KEYLRN++ PNPRT+V++KGYSF KKTEVLLTKI
Sbjct: 196 ESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKI 255
Query: 181 TPLRERVEVVEGGDAMEE 198
TPL ERVE+ E G+AMEE
Sbjct: 256 TPLLERVEITEVGEAMEE 273
>sp|Q54QR2|PSB7_DICDI Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7
PE=3 SV=1
Length = 266
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 145/192 (75%), Gaps = 3/192 (1%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+A NIYCCGAGTAADTE+ T ++SS+L+LH+ TG+++RV+TALT+LK+ LF YQG++ A
Sbjct: 71 IADNIYCCGAGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQGHISA 130
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
AL+LGG+D GP LHTIYPHGSTD LP+ TMGSGSLAAMA+FE+KYK +TK+E I LV
Sbjct: 131 ALILGGIDINGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVA 190
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPK-KTEVLLTK 179
+AI SGIFNDLGSGSNVDV VI LRN+ PN R F N Y F + T VL
Sbjct: 191 EAISSGIFNDLGSGSNVDVTVIEPSGVTVLRNYQTPNERKFRN-NPYIFKQGTTPVLKQD 249
Query: 180 ITPLRERVEVVE 191
I PL +V V+E
Sbjct: 250 IAPLSTKV-VIE 260
>sp|Q99436|PSB7_HUMAN Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1
Length = 277
Score = 224 bits (571), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 141/191 (73%), Gaps = 2/191 (1%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ A
Sbjct: 80 ISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA 139
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
ALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++ + ++E LV
Sbjct: 140 ALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVS 199
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKI 180
+AI +GIFNDLGSGSN+D+CVI+K ++LR + +PN + + T VL KI
Sbjct: 200 EAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKI 259
Query: 181 TPLRERVEVVE 191
TPL +EV+E
Sbjct: 260 TPL--EIEVLE 268
>sp|Q9JHW0|PSB7_RAT Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1
SV=1
Length = 277
Score = 223 bits (569), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 143/196 (72%), Gaps = 2/196 (1%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ A
Sbjct: 80 ISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGA 139
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
ALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++ + ++E +LV
Sbjct: 140 ALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVS 199
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKI 180
+AI +GIFNDLGSGSN+D+CVI+K ++LR + +PN + + T VL K+
Sbjct: 200 EAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKV 259
Query: 181 TPLRERV--EVVEGGD 194
TPL V E+V+ D
Sbjct: 260 TPLELEVLEEIVQTMD 275
>sp|P70195|PSB7_MOUSE Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1
Length = 277
Score = 223 bits (567), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 141/191 (73%), Gaps = 2/191 (1%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ A
Sbjct: 80 ISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGA 139
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
ALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++ + ++E +LV
Sbjct: 140 ALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVS 199
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKI 180
+AI +GIFNDLGSGSN+D+CVI+K ++LR +PN + + T VL K+
Sbjct: 200 EAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPFSVPNKKGTRLGRYRCEKGTTAVLTEKV 259
Query: 181 TPLRERVEVVE 191
TPL +EV+E
Sbjct: 260 TPL--EIEVLE 268
>sp|A1XQU1|PSB7_PIG Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2
Length = 277
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 141/191 (73%), Gaps = 2/191 (1%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ A
Sbjct: 80 ISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA 139
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
ALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++ + ++E QLV
Sbjct: 140 ALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVS 199
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKI 180
+AI +GIFNDLGSGSN+D+CVI+K ++LR + +PN + + T VL K+
Sbjct: 200 EAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKV 259
Query: 181 TPLRERVEVVE 191
T L +EV+E
Sbjct: 260 TAL--DIEVLE 268
>sp|Q2TBP0|PSB7_BOVIN Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1
Length = 277
Score = 221 bits (562), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 144/192 (75%), Gaps = 4/192 (2%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ A
Sbjct: 80 ISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA 139
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
ALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++ + ++E +LV
Sbjct: 140 ALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVS 199
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLT-K 179
+AI +GIFNDLGSGSN+D+CVI+K ++LR + +PN + + Y K T +LT K
Sbjct: 200 EAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGR-YRCEKGTNAVLTEK 258
Query: 180 ITPLRERVEVVE 191
+T L +EV+E
Sbjct: 259 VTTL--EIEVLE 268
>sp|P25043|PSB2_YEAST Proteasome subunit beta type-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PUP1 PE=1 SV=1
Length = 261
Score = 207 bits (526), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 132/178 (74%), Gaps = 2/178 (1%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
++P I+C GAGTAADTEAVT ++ S ++LH +T RE RVV+AL +LK+HLF YQG++ A
Sbjct: 66 ISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGA 125
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
L++ GVD TG HL +I+ HGSTD + ++GSGSLAAMA+ ES +K+ LTK+E I+L
Sbjct: 126 YLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLAS 185
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHK-EYLRNHLLPNPRTFVNAKGYSFPKKTEVLL 177
DAI +GI+NDLGSGSNVDVCV+ G EYLRN+L PN R K Y FP+ T +L
Sbjct: 186 DAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVRE-EKQKSYKFPRGTTAVL 242
>sp|Q09841|PSB2_SCHPO Probable proteasome subunit beta type-2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pup1 PE=2 SV=1
Length = 267
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
++PNI+C GAGTAADTE VT M+SS ++LH +T R+ RVVTALT+LK+HLF YQG++ A
Sbjct: 72 ISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGA 131
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
LVLGG DC GPHL TI HGS+D LP+ +GSGSLAA+++ E+KY+ L + E ++LV
Sbjct: 132 YLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVK 191
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLL 177
+AI +GIFNDLGSGSN D+ VI + R + PN R +K Y++ + T +L
Sbjct: 192 EAIEAGIFNDLGSGSNCDLVVIDEEKATPYRGYSKPNERATKQSK-YTYDRGTTAVL 247
>sp|Q3T0T1|PSB10_BOVIN Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1
Length = 273
Score = 177 bits (448), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+AP IYCCGAG AAD E T M +S ++LH TGRE RV T +L++ LF YQGYV A
Sbjct: 76 IAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGYVGA 135
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
+L++GGVD TGP L++++PHGS LPF +GSG AA+A+ E +++ +T + +L+V
Sbjct: 136 SLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLV 195
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSF-PKKTEVLLTK 179
+AI +GI DLGSG NVD CVIT + LR P + + Y F P T VL
Sbjct: 196 EAITAGILGDLGSGGNVDACVITAAGAKMLRALSSPT-KPIERSSQYRFAPGTTPVLSQT 254
Query: 180 ITPLRERVEVVE 191
+ PL +E+VE
Sbjct: 255 VVPL--TLELVE 264
>sp|O35955|PSB10_MOUSE Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1
Length = 273
Score = 176 bits (447), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 120/185 (64%), Gaps = 4/185 (2%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A
Sbjct: 76 IAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGA 135
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
+LV+GGVD GP L+ ++PHGS LPF +GSG AA+A+ E +++ +T + +L+V
Sbjct: 136 SLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLV 195
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKG-YSF-PKKTEVLLT 178
+AI +GI +DLGSG NVD CVIT G + R L P V G Y F P T VL
Sbjct: 196 EAITAGILSDLGSGGNVDACVITAGGAKLQRA--LSTPTEPVQRAGRYRFAPGTTPVLTR 253
Query: 179 KITPL 183
++ PL
Sbjct: 254 EVRPL 258
>sp|P40306|PSB10_HUMAN Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1
Length = 273
Score = 176 bits (447), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 125/193 (64%), Gaps = 6/193 (3%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+AP IYCCGAG AAD E T MV+S+++LH TGRE RV T +L++ LF YQG+V A
Sbjct: 76 IAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGA 135
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
+L++GGVD TGP L+ ++PHGS LPF +GSG AA+A+ E +++ +T + L+V
Sbjct: 136 SLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLV 195
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKG-YSF-PKKTEVLLT 178
+A+ +GI DLGSG NVD CVITK + LR L +P V G Y F P T VL
Sbjct: 196 EAVTAGILGDLGSGGNVDACVITKTGAKLLRT--LSSPTEPVKRSGRYHFVPGTTAVLTQ 253
Query: 179 KITPLRERVEVVE 191
+ PL +E+VE
Sbjct: 254 TVKPL--TLELVE 264
>sp|Q4KM35|PSB10_RAT Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2
SV=1
Length = 273
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 123/198 (62%), Gaps = 9/198 (4%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A
Sbjct: 76 IAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGA 135
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
+L++GGVD GP L++++PHGS LPF +GSG AA+A+ E +++ +T + +L+V
Sbjct: 136 SLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLV 195
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKG-YSFPKKT------ 173
+AI +GI DLGSG +VD CVIT G + R L +P V G Y F T
Sbjct: 196 EAITAGILGDLGSGGSVDACVITAGGAKLQRA--LSSPIEPVQRAGQYRFAPGTTPVQTQ 253
Query: 174 EVLLTKITPLRERVEVVE 191
EV + L E V+ +E
Sbjct: 254 EVRALTLELLEETVQAME 271
>sp|Q8SQN7|PSB2_ENCCU Probable proteasome subunit beta type-2 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=PUP1 PE=1 SV=1
Length = 227
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+ I CCGAGTAAD V M S +L+L + R V + +HL Y G + A
Sbjct: 43 ITDKIMCCGAGTAADASRVARMASRELRLFQNKYLRLPLVSHFRKVCTQHLHKYGGGIGA 102
Query: 61 ALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVV 120
AL++GG+D G HL+ I+PHGS ++ F ++GSGSL A+A ES+Y+ + KDE I L
Sbjct: 103 ALIVGGIDSEGCHLYEIHPHGSENSALFVSLGSGSLGAIATLESRYR-AMDKDEAIDLAC 161
Query: 121 DAICSGIFNDLGSGSNVDVCVITKGHKEYLRNH 153
DA+ +GI NDL SGSN+DVCVI E+LRN+
Sbjct: 162 DAVKAGILNDLYSGSNIDVCVIDYSGVEFLRNY 194
>sp|Q55GJ6|PSB6_DICDI Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6
PE=1 SV=1
Length = 214
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 5 IYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVL 64
IYCC +G+AADT+A++D V L++H E V TA +L + ++ + + A +++
Sbjct: 55 IYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIV 114
Query: 65 GGVDC-TGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 123
G D G ++ I GS PFA GSGS +SK+K +TKDE I+ V +++
Sbjct: 115 AGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSL 174
Query: 124 CSGIFNDLGSGSNVDVCVITKGHKE 148
+F D SG + +C+I K E
Sbjct: 175 ALAMFRDGSSGGVIRLCIIDKNGVE 199
>sp|P93395|PSB6_TOBAC Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1
Length = 234
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+ N+Y C +G+AAD++ V+D V L H G+ + V A L + +N + +Q
Sbjct: 50 LTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQT 109
Query: 61 ALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLV 119
+++GG D G ++ I P G+ PFA GSGS F+ +KEG+T++E +LV
Sbjct: 110 GMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLV 169
Query: 120 VDAICSGIFNDLGSGSNVDVCVITK 144
V A+ I D SG V I K
Sbjct: 170 VTAVSLAIARDGASGGVVRTVTINK 194
>sp|Q8LD27|PSB6_ARATH Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1
SV=2
Length = 233
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+ N+Y C +G+AAD++ V+D V L H G+ + V + L++ +N + +Q
Sbjct: 49 LTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQT 108
Query: 61 ALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLV 119
L++GG D G ++ I G+ PFA GSGS F+ +K+ +TK+E QLV
Sbjct: 109 GLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLV 168
Query: 120 VDAICSGIFNDLGSGSNVDVCVIT 143
V A+ I D SG V +I
Sbjct: 169 VKAVSLAIARDGASGGVVRTVIIN 192
>sp|Q3MHN0|PSB6_BOVIN Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1
Length = 239
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 4 NIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALV 63
I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A ++
Sbjct: 74 RIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGII 133
Query: 64 LGGVDCT-GPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDA 122
+ G D G ++++ G PFA GSGS ++ Y+EG+TK+E +Q +A
Sbjct: 134 IAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANA 193
Query: 123 ICSGIFNDLGSGSNVDVCVITK 144
+ + D SG + + I +
Sbjct: 194 LALAMERDGSSGGVIRLAAIAE 215
>sp|O43063|PSB1_SCHPO Probable proteasome subunit beta type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre3 PE=3 SV=1
Length = 226
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQA 60
+ NI+CC +G+AADT+ V D++ L ++R G + V TA TL + + + + A
Sbjct: 61 LTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSA 120
Query: 61 ALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLV 119
L++ G D TG +++I GS P A GSGS ++ ++E +T++E ++ +
Sbjct: 121 GLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFL 180
Query: 120 VDAICSGIFNDLGSGSNVDVCVITKGHKE 148
+A+ + D SG + + ++ K E
Sbjct: 181 KNAVALAMERDGSSGGTIRMVILNKDGME 209
>sp|B8GG66|PSB_METPE Proteasome subunit beta OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmB PE=3 SV=1
Length = 211
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--- 57
+A I AG D + + ++S + L++ GR V + TLL +L +GY
Sbjct: 46 VADRIGMTTAGGVGDAQQLARIMSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYY 105
Query: 58 VQAALVLGGVDCTGPHLHTIYPHG-STDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGI 116
VQ L++GGVD TGP ++++ G +T GSGS A + E +YK+ LT+DE I
Sbjct: 106 VQ--LLVGGVDATGPSVYSVDAMGGATRESDIVATGSGSPMAYGVLEDRYKKDLTEDEAI 163
Query: 117 QLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNA 164
+L + A+ + + D SG + V +ITK L L V A
Sbjct: 164 ELAIRALRAAMRRDSASGEGIHVVIITKDAYSELSEERLEQYTAAVTA 211
>sp|A1RWY6|PSB1_THEPD Proteasome subunit beta 1 OS=Thermofilum pendens (strain Hrk 5)
GN=psmB1 PE=3 SV=1
Length = 200
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%)
Query: 4 NIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALV 63
+I AGT D + + D + + + ++ TG V + TL LF Y+ + ++
Sbjct: 52 HIAATIAGTVGDAQQLVDRLRVEARYYKTITGDSMPVKSVATLASLILFQYRPILSVQML 111
Query: 64 LGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 123
+GGVD GP L ++ G+ + GSGS A+++ E +Y+E L+ +E + L V A+
Sbjct: 112 IGGVDSDGPSLFSVDWLGTVTREKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAV 171
Query: 124 CSGIFNDLGSGSNVDVCVITK 144
+ D GSG VD+ ITK
Sbjct: 172 NIALARDPGSGEGVDIATITK 192
>sp|Q8PZ04|PSB_METMA Proteasome subunit beta OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmB PE=3 SV=1
Length = 210
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--VQAALVLGGV 67
AG+ D + + +VS + QL++ ES + + L + N Y + L++GGV
Sbjct: 55 AGSVGDAQQLVRLVSVESQLYKMRRN-ESMTIKGIATLMSNFLNANRYYPMMVQLLIGGV 113
Query: 68 DCTGPHLHTIYPHG-STDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSG 126
D GP ++++ P G S + + GSGS A + E +Y+E + EG+ L + AI +
Sbjct: 114 DKNGPAIYSLDPMGGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNA 173
Query: 127 IFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVN 163
D SG N+DV VITK + L + + R +N
Sbjct: 174 TKRDSASGENIDVVVITKEAFKRLDPEEVKSRRALLN 210
>sp|Q60692|PSB6_MOUSE Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3
Length = 238
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 4 NIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALV 63
+I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A ++
Sbjct: 73 HIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGII 132
Query: 64 LGGVDCT-GPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDA 122
+ G D G ++++ G FA GSGS ++ Y+EG+TKDE +Q +A
Sbjct: 133 IAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANA 192
Query: 123 ICSGIFNDLGSGSNVDVCVITKGHKE 148
+ + D SG + + I + E
Sbjct: 193 LALAMERDGSSGGVIRLAAIQESGVE 218
>sp|P28073|PSB6_RAT Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1
SV=3
Length = 238
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 4 NIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALV 63
+I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A ++
Sbjct: 73 HIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGII 132
Query: 64 LGGVDCT-GPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDA 122
+ G D G ++++ G FA GSGS ++ Y+EG+TKDE +Q +A
Sbjct: 133 IAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANA 192
Query: 123 ICSGIFNDLGSGSNVDVCVITKGHKE 148
+ + D SG + + I + E
Sbjct: 193 LALAMERDGSSGGVIRLAAIQQSGVE 218
>sp|Q980L4|PSB1_SULSO Proteasome subunit beta 1 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmB1 PE=3 SV=1
Length = 196
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y ++ D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ +I K K N +P
Sbjct: 167 SIERDITSGDGIDLAIIDK--KGNYENKFIP 195
>sp|D0KRX1|PSB1_SULS9 Proteasome subunit beta 1 OS=Sulfolobus solfataricus (strain 98/2)
GN=psmB1 PE=3 SV=1
Length = 196
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y ++ D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ +I K K N +P
Sbjct: 167 SIERDITSGDGIDLAIIDK--KGNYENKFIP 195
>sp|Q18GX3|PSB_HALWD Proteasome subunit beta OS=Haloquadratum walsbyi (strain DSM 16790)
GN=psmB PE=3 SV=1
Length = 243
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDC 69
AG+ + +++ + ++++L+ G E + AL+ L + G+ +LGGVD
Sbjct: 95 AGSVSAAQSLISSIRAEVRLYEARRG-EDMSMEALSTLLGNFLRSGGFFIVQPILGGVDD 153
Query: 70 TGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFN 129
GPH+++I P GS + GSGS A+ + E +Y E L+ +E + +I S +
Sbjct: 154 DGPHIYSIDPAGSIIEEEYTVTGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVER 213
Query: 130 DLGSGSNVDVCVITK 144
DL SG+ ++VCV+T+
Sbjct: 214 DLASGNGINVCVVTE 228
>sp|Q9P992|PSB_METTE Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3
SV=1
Length = 210
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--VQAALVLGGV 67
AG+ D + + +VS + QL++ ES + +T L + + Y + L++GGV
Sbjct: 55 AGSVGDAQQLVRLVSVESQLYKMRRD-ESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGV 113
Query: 68 DCTGPHLHTIYPHG-STDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSG 126
D GP ++++ G S + + GSGS A + E +Y+E +T EG+ L + AI +
Sbjct: 114 DKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNA 173
Query: 127 IFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVN 163
D SG N+DV VITK + L + + R +N
Sbjct: 174 TKRDSASGENIDVVVITKEAFKRLDPEEVKSRRALLN 210
>sp|A7I841|PSB_METB6 Proteasome subunit beta OS=Methanoregula boonei (strain 6A8)
GN=psmB PE=3 SV=1
Length = 213
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 1 MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHL-----FNYQ 55
+A I AG D + + +++ + L++ RE V A TLL +L F Y
Sbjct: 48 IADRIGMTIAGGVGDAQQLARIITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPY- 106
Query: 56 GYVQAALVLGGVDCTGPHLHTIYPHG-STDTLPFATMGSGSLAAMAMFESKYKEGLTKDE 114
YVQ L++GG+D GP ++++ G +T + GSGS A + E +Y+ G+ +DE
Sbjct: 107 -YVQ--LLVGGIDDHGPSVYSVDAMGGATKEEDIVSTGSGSPMAYGVLEDRYRPGMNEDE 163
Query: 115 GIQLVVDAICSGIFNDLGSGSNVDVCVITKGH-----KEYLRNHL 154
++L V A+ S + D GSG + V VITK +E ++ HL
Sbjct: 164 AVELAVRALRSAMKRDAGSGEGIHVVVITKDRYENVSEETIKKHL 208
>sp|P28072|PSB6_HUMAN Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4
Length = 239
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 4 NIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALV 63
I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A ++
Sbjct: 74 RIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGII 133
Query: 64 LGGVDCT-GPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDA 122
+ G D G ++++ G FA GSGS ++ Y+EG+TK+E +Q +A
Sbjct: 134 IAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANA 193
Query: 123 ICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLL 155
+ + D SG + + I + E R LL
Sbjct: 194 LALAMERDGSSGGVIRLAAIAESGVE--RQVLL 224
>sp|A2SS78|PSB_METLZ Proteasome subunit beta OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=psmB PE=3 SV=1
Length = 212
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQG---YVQAALVLGG 66
AG D + + +++ + L+ G++ V A T+L +L + YVQ L++GG
Sbjct: 57 AGGVGDAQQLVRIINVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQ--LLVGG 114
Query: 67 VDCTGPHLHTI-YPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
VD +GP ++++ G+T F + GSGSL A + E ++K +T++E I+L V A+ +
Sbjct: 115 VDTSGPSVYSVDAAGGATLEENFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRALRA 174
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYL 150
+ D SG +V +IT+ EYL
Sbjct: 175 AMLRDSASGEGYNVVIITQEKFEYL 199
>sp|A1RX71|PSB2_THEPD Proteasome subunit beta 2 OS=Thermofilum pendens (strain Hrk 5)
GN=psmB2 PE=3 SV=1
Length = 204
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLL-----KKHLFNYQGYVQAA 61
AG AD + + +V ++++L+ + +V T LL ++ LF Y A
Sbjct: 48 MASAGLMADMQTLARIVEAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYY----AE 103
Query: 62 LVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVD 121
+V+GG+D G HL+++ P G+ + +GSG+ A+++ ES YK+ ++ DE + L +
Sbjct: 104 IVVGGLDEEGSHLYSLDPIGAIIEDDYVALGSGTQLAISIVESNYKKDMSLDEALSLALK 163
Query: 122 AICSGIFNDLGSGSNVDVCVITK 144
++ + + D SG VDV VI K
Sbjct: 164 SVYAAMKRDAASGDGVDVLVIGK 186
>sp|Q8TJB5|PSB_METAC Proteasome subunit beta OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmB PE=3 SV=1
Length = 210
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--VQAALVLGGV 67
AG+ D + + +VS + QL++ ES + + L + N Y + L++GGV
Sbjct: 55 AGSVGDAQQLVRLVSVESQLYKMRRN-ESMTIKGIATLMSNFLNANRYYPMMVQLLIGGV 113
Query: 68 DCTGPHLHTIYPHG-STDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSG 126
D GP ++++ G S + + GSGS A + E +YKE + EG+ L + AI +
Sbjct: 114 DKNGPAIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRAIHNA 173
Query: 127 IFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVN 163
+ D SG N+DV VITK + L + + R +N
Sbjct: 174 MKRDSASGENIDVVVITKEAFKRLDPEEVKSRRDSLN 210
>sp|D4GYZ1|PSB_HALVD Proteasome subunit beta OS=Haloferax volcanii (strain ATCC 29605 /
DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=psmB PE=1 SV=1
Length = 243
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDC 69
AG+ + +++ + ++++L+ G E + AL+ L + G+ +LGGVD
Sbjct: 95 AGSVSAAQSLISSLRAEVRLYEARRG-EDMSMQALSTLVGNFLRSGGFYVVQPILGGVDE 153
Query: 70 TGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFN 129
TGPH+++I P GS + GSGS A+ + E ++++GL+ +E + AI S +
Sbjct: 154 TGPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVER 213
Query: 130 DLGSGSNVDVCVITK 144
DL SG+ +++ V+T+
Sbjct: 214 DLASGNGINIAVVTE 228
>sp|Q2NI68|PSB_METST Proteasome subunit beta OS=Methanosphaera stadtmanae (strain DSM
3091) GN=psmB PE=3 SV=1
Length = 205
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLGGVD 68
AGT + +++ D++ +++ L++ ++ + AL +L ++ + Y VQ +L GVD
Sbjct: 55 AGTVSHAQSLMDILKAEISLYKLRNEKDMSI-DALAVLTSNILKSRPYYVQT--ILAGVD 111
Query: 69 CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIF 128
G L+T+ P GS F + GSGS A + E +Y E +T +EG ++ + AI S +
Sbjct: 112 KDGAKLYTLDPSGSYIPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAME 171
Query: 129 NDLGSGSNVDVCVITK-GHKEYLRNHL 154
D+ SG+N + VITK G K Y + +
Sbjct: 172 RDVYSGNNYRLGVITKDGMKIYTKEEI 198
>sp|C3N7K2|PSB2_SULIY Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=psmB2 PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y + D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ ++ K K N +P
Sbjct: 167 SIERDITSGDGIDLAIMDK--KGNYENKFIP 195
>sp|C3MY41|PSB2_SULIM Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=psmB2 PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y + D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ ++ K K N +P
Sbjct: 167 SIERDITSGDGIDLAIMDK--KGNYENKFIP 195
>sp|C3MRE5|PSB2_SULIL Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmB2 PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y + D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ ++ K K N +P
Sbjct: 167 SIERDITSGDGIDLAIMDK--KGNYENKFIP 195
>sp|C4KIR0|PSB2_SULIK Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmB2 PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y + D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ ++ K K N +P
Sbjct: 167 SIERDITSGDGIDLAIMDK--KGNYENKFIP 195
>sp|D2PDG6|PSB2_SULID Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain L.D.8.5
/ Lassen #2) GN=psmB2 PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y + D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ ++ K K N +P
Sbjct: 167 SIERDITSGDGIDLAIMDK--KGNYENKFIP 195
>sp|C3MZI0|PSB2_SULIA Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain M.16.27)
GN=psmB2 PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y + D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ ++ K K N +P
Sbjct: 167 SIERDITSGDGIDLAIMDK--KGNYENKFIP 195
>sp|C3NFX2|PSB1_SULIN Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=psmB1 PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + TG+ V A LL L+ Y+ + ++ G
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L+ + P GS +A +GSG+ A+ + ES+Y + D QL+ AI +
Sbjct: 107 GVDEKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGHKEYLRNHLLP 156
I D+ SG +D+ ++ K K N +P
Sbjct: 167 SIERDITSGDGIDLAIMDK--KGNYENKFIP 195
>sp|Q9DD33|PSB9_SALSA Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1
Length = 217
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%)
Query: 5 IYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVL 64
IYC +G+AAD + + +MV+ QL +H G + +V +A TL+K + Y+ + A L++
Sbjct: 59 IYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIV 118
Query: 65 GGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAIC 124
G D G + +G PFA GSGS +++Y++ ++K++ Q VV+ +
Sbjct: 119 AGWDKRGGGQVYVTLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLS 178
Query: 125 SGIFNDLGSG 134
+ D SG
Sbjct: 179 LAMSRDGSSG 188
>sp|Q975U8|PSB1_SULTO Proteasome subunit beta 1 OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=psmB1 PE=3 SV=1
Length = 197
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLG 65
GAG D + +T +++ +++ + + + V A LL L+ Y+ + L+ G
Sbjct: 47 IAGAGIMGDIQTLTRLMNVEIKYYEMYNNKPISVKAAAKLLSVILYQYKWTPFISELLFG 106
Query: 66 GVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICS 125
GVD GP L + P GS +A +GSG+ A+ + ES+Y + D+G ++V+ A+ +
Sbjct: 107 GVDDEGPKLFVLDPIGSLIEDNYAAVGSGARVAIGVLESEYDPSMNLDKGKEIVLKALKA 166
Query: 126 GIFNDLGSGSNVDVCVITKGH 146
I D+ SG +D+ I + +
Sbjct: 167 AIERDVTSGDGIDILTIKRDN 187
>sp|Q12YV7|PSB_METBU Proteasome subunit beta OS=Methanococcoides burtonii (strain DSM
6242) GN=psmB PE=3 SV=1
Length = 210
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--VQAALVLGGV 67
AG+ D + + ++S + +L + +ES + +T L ++ + Q Y + L++GGV
Sbjct: 55 AGSVGDAQQIVRIISVESKLFKMRR-QESITIKGITTLLSNMLSGQRYYPLMVQLLIGGV 113
Query: 68 DCTGPHLHTIYP-HGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSG 126
D GP ++++ G+ + + GSGS A + E +Y E +T EG+ L + A+ +
Sbjct: 114 DKNGPAIYSLDALGGNIEETRAVSTGSGSPMAYGVLEDRYTEDMTVVEGVDLAIRALHNA 173
Query: 127 IFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVN 163
+ D SG N+DV VITK E L + R +N
Sbjct: 174 MKRDSASGENIDVVVITKDKYERLDPEAVMKKRELLN 210
>sp|Q46G14|PSB_METBF Proteasome subunit beta OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmB PE=3 SV=1
Length = 211
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--VQAALVLGGV 67
AG+ D + + +V+ + QL++ ES + + L + N Y + L++GGV
Sbjct: 55 AGSVGDAQQLVRLVNVESQLYKMRRN-ESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGV 113
Query: 68 DCTGPHLHTIYP-HGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSG 126
D GP ++++ GS + + GSGS A + E +Y+E +T EG+ L + AI +
Sbjct: 114 DKNGPGIYSLDALGGSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGLDLAIRAIHNA 173
Query: 127 IFNDLGSGSNVDVCVITK 144
D SG N+DV VITK
Sbjct: 174 TKRDSASGENIDVVVITK 191
>sp|Q4JAY3|PSB1_SULAC Proteasome subunit beta 1 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=psmB1 PE=3 SV=1
Length = 195
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 7 CCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQ---AALV 63
GAG D + +T +++ +++ + + R+ A LL L YQ V + L+
Sbjct: 47 IAGAGIVGDIQTLTRIMNVEIKYYEMYNSRKISARAAAKLLSVIL--YQNKVLPYISELL 104
Query: 64 LGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 123
GGVD GP L + P GS +A +GSG+ A+ + E++Y E LT + +L + ++
Sbjct: 105 FGGVDEDGPKLFILDPIGSLIEDSYAAVGSGARVAIGVLEAEYNESLTSEAAKELAIKSM 164
Query: 124 CSGIFNDLGSGSNVDVCVITKGH 146
S + D+ SG +D+ +I K +
Sbjct: 165 KSAVERDVMSGDGIDILIINKNN 187
>sp|Q9PT26|PSB9_ONCMY Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2
SV=1
Length = 217
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%)
Query: 5 IYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVL 64
IYC +G+AAD + + +MV+ QL +H G + +V +A TL+K + Y+ + A L++
Sbjct: 59 IYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIV 118
Query: 65 GGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAIC 124
G D G + +G PFA GSGS +++Y++ ++K++ Q VV+ +
Sbjct: 119 AGWDKRGGGQVYVTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLS 178
Query: 125 SGIFNDLGSG 134
+ D SG
Sbjct: 179 LAMSRDGSSG 188
>sp|Q97AZ7|PSB_THEVO Proteasome subunit beta OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmB
PE=3 SV=1
Length = 211
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 10 AGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV--QAALVLGGV 67
AG D + + + ++L+L+R R + + A+ L ++ N Y+ L++GG+
Sbjct: 54 AGLVGDAQVLVRYMKAELELYRLQR-RVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI 112
Query: 68 DCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 127
D T PH+ +I G + +A+ GSGS + ES+Y E L+ DEG+ LV+ AI +
Sbjct: 113 D-TSPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYNEKLSIDEGVDLVIRAISAAK 171
Query: 128 FNDLGSGSNVDVCVITK 144
D SG +DV VITK
Sbjct: 172 QRDSASGGMIDVAVITK 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,065,428
Number of Sequences: 539616
Number of extensions: 2924049
Number of successful extensions: 7442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 7106
Number of HSP's gapped (non-prelim): 317
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)