BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029143
MAITMKQMSLIVGTLGTLSFICGVIAENKKPASGTPIPLKGGVICKYPSDPSVVLGYLSA
AFLVASIVAGYLSLFYPYKGRSVPHSVFFRSTSFTVFFNIAVFTGGLAATLLLWPTITEQ
IHLSRKVHSNPQAQCLTAKTGLLGGGAFVSLDSSLFWLVALMLADNAREDYFEELESSHK
GVQLTGEYDEPDHLKGSP

High Scoring Gene Products

Symbol, full name Information P value
AT4G31130 protein from Arabidopsis thaliana 4.0e-58

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029143
        (198 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2126281 - symbol:AT4G31130 "AT4G31130" species...   597  4.0e-58   1


>TAIR|locus:2126281 [details] [associations]
            symbol:AT4G31130 "AT4G31130" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161578 InterPro:IPR009606 Pfam:PF06749 EMBL:BT004774
            IPI:IPI00536038 PIR:T10667 RefSeq:NP_194842.1 UniGene:At.43091
            IntAct:Q9M089 PRIDE:Q9M089 EnsemblPlants:AT4G31130.1 GeneID:829241
            KEGG:ath:AT4G31130 TAIR:At4g31130 eggNOG:NOG293957
            HOGENOM:HOG000241486 InParanoid:Q9M089 OMA:DNAREDY PhylomeDB:Q9M089
            ProtClustDB:CLSN2685835 ArrayExpress:Q9M089 Genevestigator:Q9M089
            Uniprot:Q9M089
        Length = 195

 Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
 Identities = 119/177 (67%), Positives = 135/177 (76%)

Query:     1 MAITMKQMSLIVGTLGTLSFICGVIAENKKPASGTPIPLKGGVICKYPSDPSVVLGYLSA 60
             MA++MKQMSL+V  LG LSF+ GVIAENKKPASGTPI  KG VICKYPSDP+V LGYLSA
Sbjct:     1 MAVSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSA 60

Query:    61 AFLVASIVAGYLSLFYPYKGRSVPHXXXXXXXXXXXXXNIAVFTGGLAATLLLWPTITEQ 120
             AFL+A  VAGY SLF  YKG+SVP+             NIA+ T GLA +LLLWPTITEQ
Sbjct:    61 AFLLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQ 120

Query:   121 IHLSRKVHSNPQAQCLTAKTXXXXXXAFVSLDSSLFWLVALMLADNAREDYFEELES 177
             +HL+R VH N +  C TAKT      AFVSLDS LFWLVALMLADNARED+F+E+ES
Sbjct:   121 LHLTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVES 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      198       179   0.00089  109 3  11 22  0.42    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  149 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.93u 0.09s 14.02t   Elapsed:  00:00:00
  Total cpu time:  13.93u 0.09s 14.02t   Elapsed:  00:00:00
  Start:  Fri May 10 07:27:48 2013   End:  Fri May 10 07:27:48 2013

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