BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029143
         (198 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9I830|KCNA2_ONCMY Potassium voltage-gated channel subfamily A member 2
           OS=Oncorhynchus mykiss GN=kcna2 PE=2 SV=1
          Length = 494

 Score = 35.0 bits (79), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 23  GVIAENKKPASGTPIPLKGGVICKYP--SDPSVVLGYLSAAFLVASIVAGYLSLFYPYKG 80
           G + E ++P        +  ++ +YP  S P+ ++  +S   ++ SIV+  L     ++ 
Sbjct: 130 GFVKEEERPLPDNEFQRQVWLLFEYPESSGPARIIAIISVMVILISIVSFCLETLPIFRN 189

Query: 81  RS-VPHSVFFRSTSFTVFFNIAVFTGG---LAATLLLW 114
               PHSVF  +T+ T++F    FT     L    ++W
Sbjct: 190 DDDEPHSVFDTNTNTTIYFTSTYFTDPFFILETLCIIW 227


>sp|Q8IVB4|SL9A9_HUMAN Sodium/hydrogen exchanger 9 OS=Homo sapiens GN=SLC9A9 PE=1 SV=1
          Length = 645

 Score = 31.6 bits (70), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 81  RSVPHSVFFRSTSFTVFFNIAVFTGGLAATLLLWPTITEQIHLSRKVHSNPQAQ 134
            S P  + F +T   VFF + VF GG    +L W  I   + L   +  +P +Q
Sbjct: 454 ESQPKQMMFTTTLLLVFFTVWVFGGG-TTPMLTWLQIRVGVDLDENLKEDPSSQ 506


>sp|Q6GL42|TM39A_XENTR Transmembrane protein 39A OS=Xenopus tropicalis GN=tmem39a PE=2
           SV=1
          Length = 488

 Score = 31.6 bits (70), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 16/117 (13%)

Query: 35  TPIPLKGGVICKYPSDPSVVLGYLSAAFLVASIVAGYLSLF-----YPYKGRSVPHSVFF 89
           TP P++   I + P D  ++  +L   +L+ ++   Y++++     YPY      H    
Sbjct: 55  TPEPVRHCHIPELPLDGGLLFEFLFFIYLLVALFIQYINIYKSVWWYPYN-----HPASC 109

Query: 90  RSTSFTVF-FNIAVFTGGLAATLLLWPTITE--QIHLSRKVHSNPQAQCLTAKTGLL 143
            S +F +  +++A F   + A  L+W  I+E  Q+  S  VH    A  +TA+  LL
Sbjct: 110 TSLNFHLIDYHLAAFITVMLARRLVWALISEASQVGTSSMVH---YAALITARLVLL 163


>sp|Q9H2V7|SPNS1_HUMAN Protein spinster homolog 1 OS=Homo sapiens GN=SPNS1 PE=1 SV=1
          Length = 528

 Score = 31.6 bits (70), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 23/114 (20%)

Query: 50  DPSVVLGYLSAAFLVASIVAGYLSLFYP---YKGRSV--------PHSVFFRSTSFTVFF 98
           +PS VL  L   F   + V G L+L+ P    + R V        P      S S  +F 
Sbjct: 270 NPSFVLSSL--GFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSL-IFG 326

Query: 99  NIAVFTGGLAATLLLWPTITEQIHLSRKV-HSNPQAQCLTAKTGLLGGGAFVSL 151
            I   TG L   L         + +SR++ HSNP+A  L   TGLLG   F+ L
Sbjct: 327 LITCLTGVLGVGL--------GVEISRRLRHSNPRADPLVCATGLLGSAPFLFL 372


>sp|Q8BZ00|SL9A9_MOUSE Sodium/hydrogen exchanger 9 OS=Mus musculus GN=Slc9a9 PE=2 SV=1
          Length = 644

 Score = 30.8 bits (68), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 81  RSVPHSVFFRSTSFTVFFNIAVFTGGLAATLLLWPTITEQIHLSRKVHSNPQAQ 134
            S P  + F +T   VFF + VF GG    +L W  I   + L   +   P +Q
Sbjct: 454 ESQPKQMMFTTTLLLVFFTVWVFGGG-TTPMLTWLQIRVGVDLDESLKEEPSSQ 506


>sp|Q0IHF1|T39AA_XENLA Transmembrane protein 39A-A OS=Xenopus laevis GN=tmem39a-a PE=2
           SV=1
          Length = 488

 Score = 30.8 bits (68), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 13/102 (12%)

Query: 35  TPIPLKGGVICKYPSDPSVVLGYLSAAFLVASIVAGYLSLF-----YPYKGRSVPHSVFF 89
           TP P++   I + P D  ++  +L   +L+ ++   Y++++     YPY      H    
Sbjct: 55  TPEPVRHCRIPELPVDGGLLFEFLFFIYLLVALFIQYINIYKSVWWYPYN-----HPASC 109

Query: 90  RSTSFTVF-FNIAVFTGGLAATLLLWPTITE--QIHLSRKVH 128
            S +F +  +++A F   + A  L+W  I+E  Q+  S  VH
Sbjct: 110 TSLNFHLIDYHLAAFITVMLARRLVWALISEASQVGTSSVVH 151


>sp|Q9PSZ3|ADA11_XENLA Disintegrin and metalloproteinase domain-containing protein 11
           (Fragment) OS=Xenopus laevis GN=adam11 PE=2 SV=1
          Length = 452

 Score = 30.4 bits (67), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)

Query: 36  PIPLKGGVICKY--PSDPSVVLGYLSAAFLVASIVAG 70
           P+P   GV+ KY  PS  ++++G ++ A L+A+IV G
Sbjct: 399 PVPKPTGVVEKYKGPSGTNIIIGSIAGAVLIAAIVLG 435


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.137    0.409 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,888,653
Number of Sequences: 539616
Number of extensions: 2835749
Number of successful extensions: 6003
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6003
Number of HSP's gapped (non-prelim): 10
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)