Your job contains 1 sequence.
>029148
MGKAKKAPKFAAMKKIITKRAIKNYKEDVLNPNKKDLTKEKMPRNVPNVSSALFFTHNTA
LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALR
IAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRH
KYSIERLPEATVGGAPRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029148
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062902 - symbol:AT2G46230 "AT2G46230" species... 823 4.5e-82 1
UNIPROTKB|Q32PD0 - symbol:FCF1 "rRNA-processing protein F... 677 1.3e-66 1
UNIPROTKB|Q9Y324 - symbol:FCF1 "rRNA-processing protein F... 677 1.3e-66 1
MGI|MGI:1920986 - symbol:Fcf1 "FCF1 small subunit (SSU) p... 668 1.2e-65 1
TAIR|locus:2197885 - symbol:AT1G26530 "AT1G26530" species... 380 3.7e-64 2
ZFIN|ZDB-GENE-050417-67 - symbol:fcf1 "FCF1 small subunit... 643 5.4e-63 1
FB|FBgn0010520 - symbol:Bka "Bekka" species:7227 "Drosoph... 610 1.7e-59 1
SGD|S000002747 - symbol:FCF1 "Putative PINc domain nuclea... 602 1.2e-58 1
CGD|CAL0003244 - symbol:orf19.3220 species:5476 "Candida ... 577 5.3e-56 1
UNIPROTKB|Q59MK3 - symbol:CaO19.10731 "Potential essentia... 577 5.3e-56 1
POMBASE|SPBC32H8.04c - symbol:SPBC32H8.04c "rRNA processi... 572 1.8e-55 1
WB|WBGene00009266 - symbol:F30A10.9 species:6239 "Caenorh... 572 1.8e-55 1
ASPGD|ASPL0000002973 - symbol:AN10865 species:162425 "Eme... 551 3.0e-53 1
DICTYBASE|DDB_G0267606 - symbol:fcf1 "FCF1 family protein... 546 1.0e-52 1
UNIPROTKB|G4MWW4 - symbol:MGG_08302 "rRNA-processing prot... 462 8.1e-44 1
POMBASE|SPCC18.12c - symbol:utp23 "rRNA processing protei... 181 4.9e-14 1
UNIPROTKB|Q08DU1 - symbol:UTP23 "rRNA-processing protein ... 177 1.3e-13 1
ZFIN|ZDB-GENE-050417-353 - symbol:utp23 "UTP23, small sub... 177 1.3e-13 1
UNIPROTKB|Q9BRU9 - symbol:UTP23 "rRNA-processing protein ... 176 1.6e-13 1
MGI|MGI:1925831 - symbol:Utp23 "UTP23, small subunit (SSU... 173 3.4e-13 1
CGD|CAL0001138 - symbol:orf19.3724 species:5476 "Candida ... 166 2.4e-12 1
UNIPROTKB|Q59V16 - symbol:CaO19.3724 "Putative uncharacte... 166 2.4e-12 1
FB|FBgn0031361 - symbol:CG17652 species:7227 "Drosophila ... 164 3.1e-12 1
SGD|S000005530 - symbol:UTP23 "Component of the small sub... 153 6.2e-11 1
TAIR|locus:2062303 - symbol:MEE21 "AT2G34570" species:370... 146 6.2e-10 1
DICTYBASE|DDB_G0283685 - symbol:utp23 "FCF1 family protei... 140 8.0e-09 1
>TAIR|locus:2062902 [details] [associations]
symbol:AT2G46230 "AT2G46230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0051604 "protein maturation" evidence=RCA]
InterPro:IPR006596 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC005397 SMART:SM00670 HOGENOM:HOG000183747 KO:K14566
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 UniGene:At.28094
UniGene:At.69835 EMBL:AF367351 EMBL:AY058227 IPI:IPI00525050
PIR:C84900 RefSeq:NP_566068.1 ProteinModelPortal:O82346
STRING:O82346 PRIDE:O82346 EnsemblPlants:AT2G46230.1 GeneID:819231
KEGG:ath:AT2G46230 TAIR:At2g46230 InParanoid:O82346 OMA:ANCTPCI
PhylomeDB:O82346 ProtClustDB:CLSN2917342 ArrayExpress:O82346
Genevestigator:O82346 Uniprot:O82346
Length = 196
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 150/182 (82%), Positives = 169/182 (92%)
Query: 16 IITKRAIKNYKEDVLNPNKKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFIN 75
+I+ +A+K+YKE+VLNPNKKDLT+ +PRNVP+V + LFF++N+ L PPYRVLVDTNFIN
Sbjct: 16 MISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPAGLFFSYNSTLVPPYRVLVDTNFIN 73
Query: 76 FSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHK 135
FSIQNK+DLEKGM DCLYA CTPCITDCVMAELEKLGQKYRVALRIAKDP FERLPC HK
Sbjct: 74 FSIQNKIDLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALRIAKDPHFERLPCIHK 133
Query: 136 GTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGA 195
GTYADDCLV+RVTQHKCFIVATCDRDLKRRIRK+PGVPIMY+T KYSIE+LPEAT+GGA
Sbjct: 134 GTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTNRKYSIEKLPEATLGGA 193
Query: 196 PR 197
PR
Sbjct: 194 PR 195
>UNIPROTKB|Q32PD0 [details] [associations]
symbol:FCF1 "rRNA-processing protein FCF1 homolog"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR006596
GO:GO:0005730 GO:GO:0006364 SMART:SM00670 EMBL:BC108165
IPI:IPI00692748 RefSeq:NP_001032529.1 UniGene:Bt.7765
ProteinModelPortal:Q32PD0 SMR:Q32PD0 STRING:Q32PD0 PRIDE:Q32PD0
Ensembl:ENSBTAT00000027167 GeneID:508270 KEGG:bta:508270 CTD:51077
eggNOG:COG1412 GeneTree:ENSGT00550000074979 HOGENOM:HOG000183747
HOVERGEN:HBG051022 InParanoid:Q32PD0 KO:K14566 OMA:KKTRKFA
OrthoDB:EOG4V6ZHR BioCyc:CATTLE:508270-MONOMER NextBio:20868438
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 Uniprot:Q32PD0
Length = 198
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 128/174 (73%), Positives = 144/174 (82%)
Query: 26 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLD 83
++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLD
Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLD 85
Query: 84 LEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL 143
L + MMDCLYAKC PCITDCVMAE+EKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL
Sbjct: 86 LVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL 145
Query: 144 VERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 197
V+RVTQHKC+IVAT DRDLKRRIRK+PGVPIMYI+ H+Y+IER+P+ GAPR
Sbjct: 146 VQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDY--GAPR 197
>UNIPROTKB|Q9Y324 [details] [associations]
symbol:FCF1 "rRNA-processing protein FCF1 homolog"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR006596 GO:GO:0005730 GO:GO:0006364 SMART:SM00670
CTD:51077 eggNOG:COG1412 HOGENOM:HOG000183747 HOVERGEN:HBG051022
KO:K14566 OMA:KKTRKFA OrthoDB:EOG4V6ZHR InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:AF132969 EMBL:BX248271
EMBL:AC007956 IPI:IPI00427242 RefSeq:NP_057046.1 UniGene:Hs.579828
UniGene:Hs.711584 ProteinModelPortal:Q9Y324 SMR:Q9Y324
STRING:Q9Y324 PhosphoSite:Q9Y324 DMDM:34582346 PRIDE:Q9Y324
Ensembl:ENST00000341162 GeneID:51077 KEGG:hsa:51077 UCSC:uc001xqf.1
GeneCards:GC14P075179 HGNC:HGNC:20220 HPA:HPA046681
neXtProt:NX_Q9Y324 PharmGKB:PA162388159 InParanoid:Q9Y324
ChiTaRS:FCF1 GenomeRNAi:51077 NextBio:53711 ArrayExpress:Q9Y324
Bgee:Q9Y324 CleanEx:HS_FCF1 Genevestigator:Q9Y324
GermOnline:ENSG00000119616 Uniprot:Q9Y324
Length = 198
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 128/174 (73%), Positives = 144/174 (82%)
Query: 26 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLD 83
++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLD
Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLD 85
Query: 84 LEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL 143
L + MMDCLYAKC PCITDCVMAE+EKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL
Sbjct: 86 LVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL 145
Query: 144 VERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 197
V+RVTQHKC+IVAT DRDLKRRIRK+PGVPIMYI+ H+Y+IER+P+ GAPR
Sbjct: 146 VQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDY--GAPR 197
>MGI|MGI:1920986 [details] [associations]
symbol:Fcf1 "FCF1 small subunit (SSU) processome component
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
MGI:MGI:1920986 InterPro:IPR006596 GO:GO:0005730 GO:GO:0006364
SMART:SM00670 CTD:51077 eggNOG:COG1412 GeneTree:ENSGT00550000074979
HOGENOM:HOG000183747 HOVERGEN:HBG051022 KO:K14566 OMA:KKTRKFA
OrthoDB:EOG4V6ZHR InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
EMBL:BC033045 EMBL:BC094619 EMBL:AK003561 IPI:IPI00136015
RefSeq:NP_082908.2 UniGene:Mm.341848 ProteinModelPortal:Q9CTH6
STRING:Q9CTH6 PRIDE:Q9CTH6 Ensembl:ENSMUST00000021669 GeneID:73736
KEGG:mmu:73736 UCSC:uc007ogc.2 InParanoid:Q9CTH6 NextBio:338939
Bgee:Q9CTH6 Genevestigator:Q9CTH6 GermOnline:ENSMUSG00000021243
Uniprot:Q9CTH6
Length = 198
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 125/174 (71%), Positives = 144/174 (82%)
Query: 26 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLD 83
++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLD
Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLD 85
Query: 84 LEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL 143
L + MMDCLYAKC PCITDCVMAE+EKLGQK+RVALRIAKDPRF+RLPCTHKGTYADDCL
Sbjct: 86 LVQSMMDCLYAKCIPCITDCVMAEIEKLGQKFRVALRIAKDPRFDRLPCTHKGTYADDCL 145
Query: 144 VERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 197
V+RVTQHKC+IVAT DRDLKRRIRK+PGVPIMY++ H+Y+IER+P+ GAPR
Sbjct: 146 VQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYLSNHRYNIERMPDDY--GAPR 197
>TAIR|locus:2197885 [details] [associations]
symbol:AT1G26530 "AT1G26530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] InterPro:IPR006596 EMBL:CP002684
SMART:SM00670 KO:K14566 InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 IPI:IPI00529387 RefSeq:NP_173975.4 UniGene:At.51774
EnsemblPlants:AT1G26530.1 GeneID:839193 KEGG:ath:AT1G26530
OMA:FKEREDP Uniprot:F4HP91
Length = 178
Score = 380 (138.8 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 68/77 (88%), Positives = 74/77 (96%)
Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRH 180
IAKDPRFERLPC KGTYADDCLV+RVTQHKCFIVATCDRDLKRRIRK+PGVPIMY+T+
Sbjct: 101 IAKDPRFERLPCVLKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTQR 160
Query: 181 KYSIERLPEATVGGAPR 197
KYSIE+LPEAT+GGAPR
Sbjct: 161 KYSIEKLPEATIGGAPR 177
Score = 292 (107.8 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 55/74 (74%), Positives = 68/74 (91%)
Query: 16 IITKRAIKNYKEDVLNPNKKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFIN 75
+I+ +A+K+YKE+VLNPNKKDLT+ +PRNVP+V S LFF+HN++L PPYRVLVDTNFIN
Sbjct: 16 MISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPSGLFFSHNSSLVPPYRVLVDTNFIN 73
Query: 76 FSIQNKLDLEKGMM 89
FSIQNK+DLEKGMM
Sbjct: 74 FSIQNKIDLEKGMM 87
>ZFIN|ZDB-GENE-050417-67 [details] [associations]
symbol:fcf1 "FCF1 small subunit (SSU) processome
component homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR006596 ZFIN:ZDB-GENE-050417-67
SMART:SM00670 CTD:51077 eggNOG:COG1412 HOVERGEN:HBG051022 KO:K14566
OrthoDB:EOG4V6ZHR InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
EMBL:BC092852 IPI:IPI00570293 RefSeq:NP_001017601.1
UniGene:Dr.121141 STRING:Q568H9 GeneID:550264 KEGG:dre:550264
InParanoid:Q568H9 NextBio:20879527 Uniprot:Q568H9
Length = 198
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 120/164 (73%), Positives = 139/164 (84%)
Query: 34 KKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLY 93
K+D + K + + S LFF +NT LGPPY +LVDTNFINFSI+ KLD+ + MMDCLY
Sbjct: 37 KEDPSAIK-EQEIAKYPSCLFFQYNTQLGPPYYILVDTNFINFSIKAKLDVVQSMMDCLY 95
Query: 94 AKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCF 153
AKC PCITDCVMAELEKLG KYRVALRIAKDPRF+RLPC+HKGTYADDCLV+RVTQHKC+
Sbjct: 96 AKCVPCITDCVMAELEKLGMKYRVALRIAKDPRFDRLPCSHKGTYADDCLVQRVTQHKCY 155
Query: 154 IVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 197
IVAT DRDLKRRIRK+PGVPIMYI+ H+Y+IER+P+ GAPR
Sbjct: 156 IVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDY--GAPR 197
>FB|FBgn0010520 [details] [associations]
symbol:Bka "Bekka" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS] [GO:0048096 "chromatin-mediated
maintenance of transcription" evidence=NAS] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] InterPro:IPR006596
EMBL:AE014134 SMART:SM00670 eggNOG:COG1412
GeneTree:ENSGT00550000074979 KO:K14566 OMA:KKTRKFA
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AY071065
EMBL:AY113414 RefSeq:NP_524867.2 UniGene:Dm.14533 SMR:Q9VL75
STRING:Q9VL75 EnsemblMetazoa:FBtr0079874 GeneID:46032
KEGG:dme:Dmel_CG4539 UCSC:CG4539-RA CTD:46032 FlyBase:FBgn0010520
InParanoid:Q9VL75 OrthoDB:EOG4NZS9F GenomeRNAi:46032 NextBio:838641
Uniprot:Q9VL75
Length = 200
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 109/141 (77%), Positives = 125/141 (88%)
Query: 50 SSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELE 109
SSALFF +NT LGPPY +++DTNFINFSI+NKLD+ +GMMDCLYAKC P I+DCV AELE
Sbjct: 55 SSALFFQYNTQLGPPYHIVLDTNFINFSIKNKLDIVQGMMDCLYAKCIPYISDCVRAELE 114
Query: 110 KLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKV 169
KLG KY++ALRI DPRFERLPC HKGTYADDCLVERV QHKC+IVAT D+DLK RIRK+
Sbjct: 115 KLGNKYKLALRIISDPRFERLPCLHKGTYADDCLVERVRQHKCYIVATNDKDLKNRIRKI 174
Query: 170 PGVPIMYITRHKYSIERLPEA 190
PGVPIMY+ HKY+IER+PEA
Sbjct: 175 PGVPIMYVAAHKYAIERMPEA 195
>SGD|S000002747 [details] [associations]
symbol:FCF1 "Putative PINc domain nuclease" species:4932
"Saccharomyces cerevisiae" [GO:0032040 "small-subunit processome"
evidence=IDA;IPI] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] SGD:S000002747 InterPro:IPR006596
GO:GO:0005730 EMBL:BK006938 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 SMART:SM00670 eggNOG:COG1412
GeneTree:ENSGT00550000074979 HOGENOM:HOG000183747 KO:K14566
OMA:KKTRKFA InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
OrthoDB:EOG44BFBP EMBL:U51032 EMBL:AY557728 PIR:S70104
RefSeq:NP_010626.1 ProteinModelPortal:Q05498 DIP:DIP-6627N
IntAct:Q05498 MINT:MINT-684275 STRING:Q05498 PaxDb:Q05498
PeptideAtlas:Q05498 EnsemblFungi:YDR339C GeneID:851939
KEGG:sce:YDR339C CYGD:YDR339c NextBio:970016 Genevestigator:Q05498
GermOnline:YDR339C Uniprot:Q05498
Length = 189
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 110/176 (62%), Positives = 141/176 (80%)
Query: 17 ITKRAIKNYKEDVLNPNKKDL-TKE--KMPRNVPNVSSALFFTHNTALGPPYRVLVDTNF 73
+ KR + K+ L N++++ TKE ++ RN+P VSSALFF +N A+ PPY+VL+DTNF
Sbjct: 12 LVKRTLNTKKDQRLKKNQENIKTKEDPELTRNIPQVSSALFFQYNQAIKPPYQVLIDTNF 71
Query: 74 INFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCT 133
INFSIQ K+D+ +GMMDCL AKC P ITDCVMAELEKLG KYR+AL++A+DPR +RL C+
Sbjct: 72 INFSIQKKVDIVRGMMDCLLAKCNPLITDCVMAELEKLGPKYRIALKLARDPRIKRLSCS 131
Query: 134 HKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPE 189
HKGTYADDCLV RV QHKC+IVAT D LK+RIRK+PG+P+M + H Y IE+LP+
Sbjct: 132 HKGTYADDCLVHRVLQHKCYIVATNDAGLKQRIRKIPGIPLMSVGGHAYVIEKLPD 187
>CGD|CAL0003244 [details] [associations]
symbol:orf19.3220 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] CGD:CAL0003244
InterPro:IPR006596 SMART:SM00670 eggNOG:COG1412 KO:K14566
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000224
EMBL:AACQ01000223 RefSeq:XP_710959.1 RefSeq:XP_710970.1
ProteinModelPortal:Q59MK3 STRING:Q59MK3 GeneID:3647437
GeneID:3647448 KEGG:cal:CaO19.10731 KEGG:cal:CaO19.3220
Uniprot:Q59MK3
Length = 201
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 103/149 (69%), Positives = 126/149 (84%)
Query: 41 KMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI 100
++ R+VP VSSALFF +N ++ PPY+VL+DTNFINFSIQ K+D+ +G+MDCL AKC P I
Sbjct: 51 ELTRSVPQVSSALFFKYNESIKPPYQVLIDTNFINFSIQKKIDIIRGLMDCLMAKCIPII 110
Query: 101 TDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDR 160
TDCV+AELEKLG KYR+AL++AKDPR +RL C+H GTYADDCLV RV QHKC+IVAT D
Sbjct: 111 TDCVIAELEKLGSKYRIALKLAKDPRIQRLKCSHVGTYADDCLVNRVIQHKCYIVATNDA 170
Query: 161 DLKRRIRKVPGVPIMYITRHKYSIERLPE 189
DLKRRIRK+PG+PIM + H Y IERLP+
Sbjct: 171 DLKRRIRKIPGIPIMSVGGHSYVIERLPD 199
>UNIPROTKB|Q59MK3 [details] [associations]
symbol:CaO19.10731 "Potential essential protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0003244 InterPro:IPR006596
SMART:SM00670 eggNOG:COG1412 KO:K14566 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000224 EMBL:AACQ01000223
RefSeq:XP_710959.1 RefSeq:XP_710970.1 ProteinModelPortal:Q59MK3
STRING:Q59MK3 GeneID:3647437 GeneID:3647448 KEGG:cal:CaO19.10731
KEGG:cal:CaO19.3220 Uniprot:Q59MK3
Length = 201
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 103/149 (69%), Positives = 126/149 (84%)
Query: 41 KMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI 100
++ R+VP VSSALFF +N ++ PPY+VL+DTNFINFSIQ K+D+ +G+MDCL AKC P I
Sbjct: 51 ELTRSVPQVSSALFFKYNESIKPPYQVLIDTNFINFSIQKKIDIIRGLMDCLMAKCIPII 110
Query: 101 TDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDR 160
TDCV+AELEKLG KYR+AL++AKDPR +RL C+H GTYADDCLV RV QHKC+IVAT D
Sbjct: 111 TDCVIAELEKLGSKYRIALKLAKDPRIQRLKCSHVGTYADDCLVNRVIQHKCYIVATNDA 170
Query: 161 DLKRRIRKVPGVPIMYITRHKYSIERLPE 189
DLKRRIRK+PG+PIM + H Y IERLP+
Sbjct: 171 DLKRRIRKIPGIPIMSVGGHSYVIERLPD 199
>POMBASE|SPBC32H8.04c [details] [associations]
symbol:SPBC32H8.04c "rRNA processing protein Fcf1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] PomBase:SPBC32H8.04c InterPro:IPR006596
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR EMBL:AB004535
GO:GO:0006364 GO:GO:0032040 SMART:SM00670 eggNOG:COG1412
HOGENOM:HOG000183747 KO:K14566 OMA:KKTRKFA InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 RefSeq:NP_595610.1
ProteinModelPortal:O13610 STRING:O13610 EnsemblFungi:SPBC32H8.04c.1
GeneID:2540218 KEGG:spo:SPBC32H8.04c OrthoDB:EOG44BFBP
NextBio:20801350 Uniprot:O13610
Length = 192
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 109/177 (61%), Positives = 136/177 (76%)
Query: 19 KRAIKNYKEDVLNPNKKDLTKEK--------MPRNVPNVSSALFFTHNTALGPPYRVLVD 70
KR I N K+ L KKD KEK + R +P ++S LFF N +LGPPY V++D
Sbjct: 14 KRVI-NLKDQRLQ--KKDQKKEKEKTTKNGELVREIPQMASNLFFQFNESLGPPYHVIID 70
Query: 71 TNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERL 130
TNFINF +Q K+DL +G+M CLYAK PCI+DCVMAELEKLG +YR+ALRIAKD RFERL
Sbjct: 71 TNFINFCLQQKIDLFEGLMTCLYAKTIPCISDCVMAELEKLGIRYRIALRIAKDERFERL 130
Query: 131 PCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERL 187
PCTHKGTYADDC+V+RV QHKC++VAT D++LK+RIRK+PG+PI+ + HK +ERL
Sbjct: 131 PCTHKGTYADDCIVQRVMQHKCYLVATNDKNLKQRIRKIPGIPILSVANHKIRVERL 187
>WB|WBGene00009266 [details] [associations]
symbol:F30A10.9 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR006596 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 SMART:SM00670
eggNOG:COG1412 GeneTree:ENSGT00550000074979 HOGENOM:HOG000183747
KO:K14566 OMA:KKTRKFA InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 EMBL:Z81072 PIR:A87883 PIR:T21571 RefSeq:NP_492523.1
ProteinModelPortal:Q93638 SMR:Q93638 STRING:Q93638 PaxDb:Q93638
EnsemblMetazoa:F30A10.9.1 EnsemblMetazoa:F30A10.9.2 GeneID:172780
KEGG:cel:CELE_F30A10.9 UCSC:F30A10.9 CTD:172780 WormBase:F30A10.9
InParanoid:Q93638 NextBio:876977 Uniprot:Q93638
Length = 196
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 105/182 (57%), Positives = 142/182 (78%)
Query: 17 ITKRAIKNYKED--VLNPNKKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFI 74
+ K+ KE+ V+ K D + K+ R P +SSA+F +NT LGPP+ V+VDTNF+
Sbjct: 17 LVKKTDNRIKEEQRVIRTPKVDEQELKLVR-APKISSAMFMKYNTQLGPPFHVIVDTNFV 75
Query: 75 NFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTH 134
NF+++N++D+ +G MDCL+AK TDCV+AELEK+ +++++AL++ KDPR +RL C H
Sbjct: 76 NFAVKNRIDMFQGFMDCLFAKTIVYATDCVLAELEKV-RRFKIALKVLKDPRVQRLKCEH 134
Query: 135 KGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGG 194
KGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRK+PGVPIMYI H++SIER+P+A G
Sbjct: 135 KGTYADDCLVQRVTQHKCYIVATCDRDLKRRIRKIPGVPIMYIVNHRFSIERMPDAY--G 192
Query: 195 AP 196
AP
Sbjct: 193 AP 194
>ASPGD|ASPL0000002973 [details] [associations]
symbol:AN10865 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR006596 GO:GO:0005730 EMBL:BN001301 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 SMART:SM00670
HOGENOM:HOG000183747 OMA:KKTRKFA InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EnsemblFungi:CADANIAT00007750
Uniprot:C8V372
Length = 187
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 103/172 (59%), Positives = 132/172 (76%)
Query: 19 KRAIKNYKEDVLNPNKKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSI 78
KR IK E + P +++ R+V + LFF NTALGPPYRVLVDTNF++ +I
Sbjct: 14 KRTIKARDERLKKPEPPKKKPDEIVRHVQTAPTNLFFAANTALGPPYRVLVDTNFVSHAI 73
Query: 79 QNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTY 138
+ KLDL MMD LYAKC P TDC +AELEKLG KYR+ALR+AKDPR+ER+ C+HKGTY
Sbjct: 74 RAKLDLLPAMMDLLYAKCIPTFTDCTIAELEKLGDKYRLALRVAKDPRWERVKCSHKGTY 133
Query: 139 ADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEA 190
ADDCLV+RVT+H+ ++VAT D+DL RR+RK+PGVPIM + R K++IE+LP+A
Sbjct: 134 ADDCLVDRVTKHRIYLVATNDKDLCRRLRKIPGVPIMKVARGKFTIEKLPDA 185
>DICTYBASE|DDB_G0267606 [details] [associations]
symbol:fcf1 "FCF1 family protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] dictyBase:DDB_G0267606 InterPro:IPR006596
GenomeReviews:CM000150_GR GO:GO:0005730 EMBL:AAFI02000003
GO:GO:0006364 SMART:SM00670 eggNOG:COG1412 KO:K14566 OMA:KKTRKFA
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
RefSeq:XP_647159.1 STRING:Q55GM5 EnsemblProtists:DDB0237574
GeneID:8615962 KEGG:ddi:DDB_G0267606 ProtClustDB:CLSZ2431510
Uniprot:Q55GM5
Length = 194
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 94/172 (54%), Positives = 133/172 (77%)
Query: 18 TKRAIKNYKEDVLNPNKKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFS 77
T N ++ + ++D ++K+ + +S +FF++N AL PPY V++DTNFINFS
Sbjct: 20 TNPNFSNRQKQIQRSKQEDEHRKKLEEIPEDNTSHMFFSYNEALVPPYHVIIDTNFINFS 79
Query: 78 IQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGT 137
I +KLD+ +MDCLYAKC P I+DCV AE+E+LG K++VAL+I+KDPRF+RL C+HKGT
Sbjct: 80 ISHKLDIIHSLMDCLYAKCIPYISDCVAAEIERLGSKFKVALKISKDPRFQRLTCSHKGT 139
Query: 138 YADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPE 189
YADDC++ R+T H+ FIVATCD DL+RRIRK+PGVPI+Y+ KY++ER+P+
Sbjct: 140 YADDCIINRITMHRMFIVATCDADLRRRIRKIPGVPIVYLKGKKYTVERMPD 191
>UNIPROTKB|G4MWW4 [details] [associations]
symbol:MGG_08302 "rRNA-processing protein FCF1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006596 GO:GO:0005730 EMBL:CM001232 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 SMART:SM00670 KO:K14566
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
RefSeq:XP_003715775.1 ProteinModelPortal:G4MWW4
EnsemblFungi:MGG_08302T0 GeneID:2678479 KEGG:mgr:MGG_08302
Uniprot:G4MWW4
Length = 201
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 89/147 (60%), Positives = 110/147 (74%)
Query: 44 RNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDC 103
R V LFF+HN + PPY VLVDT+FI ++ K++L +G+MD +YA C P ITDC
Sbjct: 53 RQVTAAPKGLFFSHNENIVPPYNVLVDTSFITHTVGAKIELLEGLMDSMYATCRPIITDC 112
Query: 104 VMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLK 163
VMAELEKLG KYR+ALRIA+D R+ERL C HK YADDCLV+R +++ +IVAT DRDLK
Sbjct: 113 VMAELEKLGPKYRIALRIARDERWERLKCDHK-VYADDCLVDRAVKNRIYIVATNDRDLK 171
Query: 164 RRIRKVPGVPIMYITRHKYSIERLPEA 190
RRIRK+PGVPI+ R KY +E LP A
Sbjct: 172 RRIRKIPGVPIVTCGRKKYLVEGLPGA 198
>POMBASE|SPCC18.12c [details] [associations]
symbol:utp23 "rRNA processing protein Utp23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO]
PomBase:SPCC18.12c InterPro:IPR006596 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006364 GO:GO:0032040 SMART:SM00670
eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE PIR:T41155 RefSeq:NP_588391.1
ProteinModelPortal:O74862 STRING:O74862 EnsemblFungi:SPCC18.12c.1
GeneID:2539158 KEGG:spo:SPCC18.12c HOGENOM:HOG000212592
OrthoDB:EOG4FXVJ0 NextBio:20800330 Uniprot:O74862
Length = 260
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 46/149 (30%), Positives = 76/149 (51%)
Query: 53 LFFTHNTALG--PPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEK 110
L T+ G PY+VLVD +F+ Q K+D++ + + P IT C + +L
Sbjct: 12 LMHTYQLLFGFREPYQVLVDADFLKDLSQQKIDIQAALARTVQGAIKPMITQCCIRQLYS 71
Query: 111 LGQKYRVALRIAKDPRFERLPCTH--KGTYADDCLVERVT-----QHKCFIVATCDRDLK 163
+ + +RIAK FER C H + +C+ V +H+ ++VAT D +L+
Sbjct: 72 KSDELKQEIRIAKS--FERRRCGHIDEALSPSECIQSVVNINGRNKHR-YVVATQDPELR 128
Query: 164 RRIRKVPGVPIMYITRHKYSIERLPEATV 192
+ +R VPGVP++Y+ R +E AT+
Sbjct: 129 QALRSVPGVPLIYMKRSVVILEPASRATL 157
>UNIPROTKB|Q08DU1 [details] [associations]
symbol:UTP23 "rRNA-processing protein UTP23 homolog"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] GO:GO:0005730
BRENDA:3.1.1.77 GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:BC123565 IPI:IPI00695224
RefSeq:NP_001069507.1 RefSeq:XP_001249520.1 UniGene:Bt.88040
ProteinModelPortal:Q08DU1 STRING:Q08DU1 PRIDE:Q08DU1 GeneID:534858
GeneID:781182 KEGG:bta:534858 KEGG:bta:781182 CTD:84294
HOGENOM:HOG000239062 HOVERGEN:HBG054456 InParanoid:Q08DU1 KO:K14773
OrthoDB:EOG41G35D NextBio:20876552 Uniprot:Q08DU1
Length = 248
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/142 (28%), Positives = 74/142 (52%)
Query: 54 FFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQ 113
FF +N + PY++L+D F +++ ++ L + + L A+ C T CV+ ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMAETQLCTTRCVLKELETLGK 74
Query: 114 KYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQ---HKCFIVATCDRDLKRRIRKVP 170
A IA+ + P +CL+ V H F+ AT D++L +++K P
Sbjct: 75 DLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHHYFL-ATQDQNLSMKVKKKP 133
Query: 171 GVPIMYITRHKYSIERLPEATV 192
G+P+M+I ++ +++ T+
Sbjct: 134 GIPLMFIIQNTIVLDKPSPKTI 155
>ZFIN|ZDB-GENE-050417-353 [details] [associations]
symbol:utp23 "UTP23, small subunit (SSU) processome
component, homolog (yeast)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-050417-353 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:CR855331 HOGENOM:HOG000239062
HOVERGEN:HBG054456 OrthoDB:EOG41G35D OMA:GLVKNPE
GeneTree:ENSGT00550000074848 IPI:IPI00803616 UniGene:Dr.78006
Ensembl:ENSDART00000031524 Uniprot:B8JIZ4
Length = 257
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 42/144 (29%), Positives = 78/144 (54%)
Query: 54 FFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQ 113
F+ +N + P+++L+D F +++NK+ +++ + L + C T+C + ELE L +
Sbjct: 15 FYKYNFSFREPFQILIDGTFCQAALKNKIQIKEQLPKYLMGEIQLCTTNCALKELESLAK 74
Query: 114 KYRVALRIAKDPRFERLPCTH-KGTY-ADDCLVERVTQ---HKCFIVATCDRDLKRRIRK 168
A I + RF+ C H K A +CL+ + + H FI AT D+ L ++K
Sbjct: 75 DLYGAKLILQ--RFQIRKCKHMKDPVPASECLLSMLAETNPHHYFI-ATQDQQLTTALKK 131
Query: 169 VPGVPIMYITRHKYSIERLPEATV 192
+PGVP++YI + +++ E T+
Sbjct: 132 IPGVPLLYIILNTMVLDKPSERTL 155
>UNIPROTKB|Q9BRU9 [details] [associations]
symbol:UTP23 "rRNA-processing protein UTP23 homolog"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] EMBL:CH471060
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 CTD:84294 HOGENOM:HOG000239062
HOVERGEN:HBG054456 KO:K14773 EMBL:AK055279 EMBL:AK315770
EMBL:AC087350 EMBL:AP002905 EMBL:BC005955 EMBL:BC022441
IPI:IPI00031612 IPI:IPI00980310 RefSeq:NP_115710.2 UniGene:Hs.86970
ProteinModelPortal:Q9BRU9 STRING:Q9BRU9 PhosphoSite:Q9BRU9
DMDM:296452859 PRIDE:Q9BRU9 Ensembl:ENST00000309822
Ensembl:ENST00000357148 GeneID:84294 KEGG:hsa:84294 UCSC:uc003yoc.3
GeneCards:GC08P117849 HGNC:HGNC:28224 HPA:HPA044418
neXtProt:NX_Q9BRU9 PharmGKB:PA162408778 InParanoid:Q9BRU9
OMA:GLVKNPE PhylomeDB:Q9BRU9 ChiTaRS:UTP23 GenomeRNAi:84294
NextBio:73940 ArrayExpress:Q9BRU9 Bgee:Q9BRU9 CleanEx:HS_UTP23
Genevestigator:Q9BRU9 Uniprot:Q9BRU9
Length = 249
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 41/142 (28%), Positives = 74/142 (52%)
Query: 54 FFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQ 113
FF +N + PY++L+D F +++ ++ L + + L + C T CV+ ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
Query: 114 KYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQ---HKCFIVATCDRDLKRRIRKVP 170
A IA+ + P +CL+ V + H F VAT D++L +++K P
Sbjct: 75 DLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYF-VATQDQNLSVKVKKKP 133
Query: 171 GVPIMYITRHKYSIERLPEATV 192
GVP+M+I ++ +++ T+
Sbjct: 134 GVPLMFIIQNTMVLDKPSPKTI 155
>MGI|MGI:1925831 [details] [associations]
symbol:Utp23 "UTP23, small subunit (SSU) processome
component, homolog (yeast)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=IEA] MGI:MGI:1925831 GO:GO:0005730
GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 CTD:84294 HOVERGEN:HBG054456 KO:K14773 OMA:GLVKNPE
EMBL:AK021306 EMBL:AK042518 EMBL:AK134445 EMBL:BC046791
EMBL:BC056961 IPI:IPI00459626 RefSeq:NP_084408.1 UniGene:Mm.176347
ProteinModelPortal:Q9CX11 STRING:Q9CX11 PhosphoSite:Q9CX11
PaxDb:Q9CX11 PRIDE:Q9CX11 Ensembl:ENSMUST00000137116 GeneID:78581
KEGG:mmu:78581 UCSC:uc007vrc.2 GeneTree:ENSGT00550000074848
HOGENOM:HOG000185771 InParanoid:Q9CX11 NextBio:349135 Bgee:Q9CX11
Genevestigator:Q9CX11 Uniprot:Q9CX11
Length = 249
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 40/142 (28%), Positives = 74/142 (52%)
Query: 54 FFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQ 113
FF +N + PY++L+D F +++ ++ L + L + C T CV+ ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLRDQLPRYLMGETQLCTTRCVLKELETLGK 74
Query: 114 KYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQ---HKCFIVATCDRDLKRRIRKVP 170
+ A IA+ + P +CL+ V + H F VAT D++L ++++ P
Sbjct: 75 ELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHHYF-VATQDQNLSVKVKRTP 133
Query: 171 GVPIMYITRHKYSIERLPEATV 192
G+P+M+I ++ +++ TV
Sbjct: 134 GIPLMFIIQNTIVLDKPSPRTV 155
>CGD|CAL0001138 [details] [associations]
symbol:orf19.3724 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] CGD:CAL0001138 eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000127
RefSeq:XP_713413.1 STRING:Q59V16 GeneID:3644926 KEGG:cal:CaO19.3724
Uniprot:Q59V16
Length = 269
Score = 166 (63.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 42/142 (29%), Positives = 70/142 (49%)
Query: 55 FTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQK 114
+ H PY+++VD I D+ KG + A+ P IT C + L K
Sbjct: 16 YVHAFKFREPYQIIVDNELITTCQSASFDINKGFTRTIQAENKPMITQCCIQAL--YDTK 73
Query: 115 YRVALRIAKDPRFERLPCTHKGTYADDCLVERVT----QHKC-FIVATCDRDLKRRIRKV 169
+ A+ IAK FER C H+ +E + Q+K +IVA+ D L++++RK+
Sbjct: 74 NQPAIDIAKS--FERRKCNHREAIDPSQCIESIVNIKGQNKHRYIVASQDLQLRKKLRKI 131
Query: 170 PGVPIMYITRHKYSIERLPEAT 191
PGVP++Y+ R +E + + +
Sbjct: 132 PGVPLIYMNRSVMVMEPISDVS 153
>UNIPROTKB|Q59V16 [details] [associations]
symbol:CaO19.3724 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0001138 eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000127
RefSeq:XP_713413.1 STRING:Q59V16 GeneID:3644926 KEGG:cal:CaO19.3724
Uniprot:Q59V16
Length = 269
Score = 166 (63.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 42/142 (29%), Positives = 70/142 (49%)
Query: 55 FTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQK 114
+ H PY+++VD I D+ KG + A+ P IT C + L K
Sbjct: 16 YVHAFKFREPYQIIVDNELITTCQSASFDINKGFTRTIQAENKPMITQCCIQAL--YDTK 73
Query: 115 YRVALRIAKDPRFERLPCTHKGTYADDCLVERVT----QHKC-FIVATCDRDLKRRIRKV 169
+ A+ IAK FER C H+ +E + Q+K +IVA+ D L++++RK+
Sbjct: 74 NQPAIDIAKS--FERRKCNHREAIDPSQCIESIVNIKGQNKHRYIVASQDLQLRKKLRKI 131
Query: 170 PGVPIMYITRHKYSIERLPEAT 191
PGVP++Y+ R +E + + +
Sbjct: 132 PGVPLIYMNRSVMVMEPISDVS 153
>FB|FBgn0031361 [details] [associations]
symbol:CG17652 species:7227 "Drosophila melanogaster"
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] GO:GO:0006911
EMBL:AE014134 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE GeneTree:ENSGT00550000074848
RefSeq:NP_608617.1 UniGene:Dm.18434 ProteinModelPortal:Q9VQ40
IntAct:Q9VQ40 MINT:MINT-330392 STRING:Q9VQ40 PRIDE:Q9VQ40
EnsemblMetazoa:FBtr0077904 EnsemblMetazoa:FBtr0333543 GeneID:33353
KEGG:dme:Dmel_CG17652 UCSC:CG17652-RA FlyBase:FBgn0031361
InParanoid:Q9VQ40 OrthoDB:EOG4WPZJV PhylomeDB:Q9VQ40
GenomeRNAi:33353 NextBio:783162 ArrayExpress:Q9VQ40 Bgee:Q9VQ40
Uniprot:Q9VQ40
Length = 244
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 41 KMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI 100
K+ R + + +FF N PY+VL+D F ++Q K+ +++ +
Sbjct: 2 KISRFKKSHKTLVFFASNFDYREPYQVLIDATFCQAALQQKIGIDEQIKKYFQCGVKLLT 61
Query: 101 TDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKG--TYADDCLVERVTQHKCFIVATC 158
T CV+ E E LG A I K RF C H+G A +C ++ +T+ ++VA+
Sbjct: 62 TQCVILESESLGAPLTGATSIVK--RFHVHKCGHEGKPVPASEC-IKSMTKDNRYVVASQ 118
Query: 159 DRDLKRRIRKVPGVPIMYITRHK 181
DR L+ +RK+PG ++Y+ HK
Sbjct: 119 DRLLQESLRKIPGRCLLYL--HK 139
>SGD|S000005530 [details] [associations]
symbol:UTP23 "Component of the small subunit processome,
involved in 40S ribosomal" species:4932 "Saccharomyces cerevisiae"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0032040 "small-subunit processome"
evidence=IDA;IPI] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0006364 "rRNA processing" evidence=IEA] SGD:S000005530
GO:GO:0005739 GO:GO:0005730 EMBL:BK006948 GO:GO:0003723 EMBL:U43491
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE GeneTree:ENSGT00550000074848
HOGENOM:HOG000212592 OrthoDB:EOG4FXVJ0 EMBL:Z74912 PIR:S61987
RefSeq:NP_014646.1 ProteinModelPortal:Q12339 DIP:DIP-4352N
IntAct:Q12339 MINT:MINT-480103 STRING:Q12339 PaxDb:Q12339
PeptideAtlas:Q12339 EnsemblFungi:YOR004W GeneID:854165
KEGG:sce:YOR004W CYGD:YOR004w NextBio:975947 Genevestigator:Q12339
GermOnline:YOR004W Uniprot:Q12339
Length = 254
Score = 153 (58.9 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 44/149 (29%), Positives = 76/149 (51%)
Query: 53 LFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLG 112
L ++H PY+VLVD + + +L G+ L A IT C + L +
Sbjct: 14 LVYSHTFKFREPYQVLVDNQLVLECNNSNFNLPSGLKRTLQADVKVMITQCCIQALYET- 72
Query: 113 QKYRVALRIAKDPRFERLPCTHKGTYAD-----DCL-----VERVTQHKCFIVATCDRDL 162
+ A+ +AK +FER C H ++ D +C+ + +H+ ++VA+ D DL
Sbjct: 73 -RNDGAINLAK--QFERRRCNH--SFKDPKSPAECIESVVNISGANKHR-YVVASQDIDL 126
Query: 163 KRRIRKVPGVPIMYITRHKYSIERLPEAT 191
+R++R VPGVP++++TR +E L A+
Sbjct: 127 RRKLRTVPGVPLIHLTRSVMVMEPLSTAS 155
>TAIR|locus:2062303 [details] [associations]
symbol:MEE21 "AT2G34570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] EMBL:CP002685 GO:GO:0009793
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
HOGENOM:HOG000239062 KO:K14773 UniGene:At.47485 UniGene:At.61738
EMBL:AY102549 EMBL:AY954813 IPI:IPI00538898 RefSeq:NP_181004.2
ProteinModelPortal:Q8L8C2 STRING:Q8L8C2 PRIDE:Q8L8C2
EnsemblPlants:AT2G34570.1 GeneID:818021 KEGG:ath:AT2G34570
TAIR:At2g34570 InParanoid:Q8L8C2 OMA:CEHEEAK PhylomeDB:Q8L8C2
ProtClustDB:CLSN2680029 Genevestigator:Q8L8C2 Uniprot:Q8L8C2
Length = 281
Score = 146 (56.5 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 42/152 (27%), Positives = 76/152 (50%)
Query: 41 KMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLD-LEKGMMDCLYAKCTPC 99
++ R N + FFT PY+VL D F++ + N++ + + + L
Sbjct: 2 RVKRQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKLF 61
Query: 100 ITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHK-GTYADDCLVERV----TQHKCFI 154
T CV+AELEKLG+ + +L A+ C H+ AD+CL E + T+H F
Sbjct: 62 TTRCVIAELEKLGKDFAESLEAAQT--LNTATCEHEEAKTADECLSEVIGVQNTEH--FF 117
Query: 155 VATCDRDLKRRIRKVPGVPIMYITRHKYSIER 186
+ T D + +R++++ VP+++ R+ I++
Sbjct: 118 LGTQDAEFRRKLQQESIVPLVFGLRNILLIDQ 149
>DICTYBASE|DDB_G0283685 [details] [associations]
symbol:utp23 "FCF1 family protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0283685
EMBL:AAFI02000056 GenomeReviews:CM000153_GR eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 KO:K14773
RefSeq:XP_638965.1 PRIDE:Q54QQ8 EnsemblProtists:DDB0237573
GeneID:8624211 KEGG:ddi:DDB_G0283685 InParanoid:Q54QQ8
Uniprot:Q54QQ8
Length = 439
Score = 140 (54.3 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 36/139 (25%), Positives = 69/139 (49%)
Query: 54 FFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQ 113
F+ N + P+ VL+D FI + + ++ + L +K + IT C +AE+++ +
Sbjct: 15 FYKANYSYKEPFSVLMDPGFIKKCLNMNIFFKEALPKILESKVSFFITPCCIAEMKRKPR 74
Query: 114 KYRVALRIAKDPRFERLPCTHKGTYADDCLVER------VTQHKCFIVATCDRDLKRRIR 167
+Y L I+ R E C HK + + +V++ + Q F A D D + +R
Sbjct: 75 EYSNDL-ISTCKRIEYFQCDHKHSADEQNMVQKCFEDISIKQSNTFFFAVQDHDHRLLLR 133
Query: 168 KVPGVPIMYITRHKYSIER 186
K PG+PI+++ + +E+
Sbjct: 134 KNPGIPILFVLTNLIILEK 152
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 185 0.00080 110 3 11 22 0.39 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 565 (60 KB)
Total size of DFA: 153 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.38u 0.09s 17.47t Elapsed: 00:00:01
Total cpu time: 17.38u 0.09s 17.47t Elapsed: 00:00:01
Start: Fri May 10 07:48:10 2013 End: Fri May 10 07:48:11 2013