Query 029150
Match_columns 198
No_of_seqs 190 out of 1104
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 13:22:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029150.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029150hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 3.8E-15 1.3E-19 101.6 8.6 67 8-76 1-67 (68)
2 1cc8_A Protein (metallochapero 99.5 9.5E-14 3.2E-18 95.0 9.2 67 8-75 4-71 (73)
3 4a4j_A Pacszia, cation-transpo 99.5 3.7E-13 1.3E-17 90.5 9.3 65 9-74 2-69 (69)
4 3dxs_X Copper-transporting ATP 99.4 7.1E-13 2.4E-17 90.4 8.4 67 8-75 1-71 (74)
5 3fry_A Probable copper-exporti 99.4 7.7E-13 2.6E-17 91.0 7.9 67 7-76 3-70 (73)
6 2crl_A Copper chaperone for su 99.4 1.6E-12 5.4E-17 95.6 9.5 71 7-78 17-87 (98)
7 2roe_A Heavy metal binding pro 99.3 6.2E-12 2.1E-16 83.4 6.9 63 11-74 2-65 (66)
8 2xmm_A SSR2857 protein, ATX1; 99.3 4.6E-12 1.6E-16 82.1 6.1 61 10-71 2-63 (64)
9 2l3m_A Copper-ION-binding prot 99.2 4.7E-11 1.6E-15 79.1 8.7 64 7-71 3-70 (71)
10 2xmw_A PACS-N, cation-transpor 99.2 7.6E-11 2.6E-15 77.7 9.3 66 8-74 2-70 (71)
11 1aw0_A Menkes copper-transport 99.2 6.8E-11 2.3E-15 78.4 8.9 66 8-74 2-71 (72)
12 1osd_A MERP, hypothetical prot 99.2 6.9E-11 2.3E-15 78.4 8.8 66 8-74 2-71 (72)
13 2k2p_A Uncharacterized protein 99.2 2.3E-11 7.8E-16 87.0 6.1 65 6-71 19-84 (85)
14 1mwy_A ZNTA; open-faced beta-s 99.2 1.4E-10 4.9E-15 77.9 9.7 66 8-74 2-69 (73)
15 2g9o_A Copper-transporting ATP 99.2 8.9E-11 3.1E-15 83.9 8.9 70 9-79 3-79 (90)
16 2qif_A Copper chaperone COPZ; 99.2 1.2E-10 4.2E-15 75.3 8.6 63 8-71 1-67 (69)
17 1q8l_A Copper-transporting ATP 99.2 9.1E-11 3.1E-15 81.9 8.4 71 6-77 6-80 (84)
18 3cjk_B Copper-transporting ATP 99.2 2.3E-10 8E-15 76.9 9.8 65 9-74 2-70 (75)
19 1kvi_A Copper-transporting ATP 99.2 1.3E-10 4.4E-15 79.1 8.5 68 7-75 6-77 (79)
20 1fvq_A Copper-transporting ATP 99.2 1E-10 3.5E-15 77.5 7.7 66 9-75 2-70 (72)
21 1cpz_A Protein (COPZ); copper 99.2 1.5E-10 5.1E-15 75.7 8.4 63 11-74 2-68 (68)
22 1y3j_A Copper-transporting ATP 99.1 8.7E-11 3E-15 79.8 6.9 67 8-75 2-72 (77)
23 1opz_A Potential copper-transp 99.1 1.7E-10 5.8E-15 76.8 8.0 66 8-74 5-74 (76)
24 2kyz_A Heavy metal binding pro 99.1 8.1E-11 2.8E-15 78.3 5.8 62 10-74 2-64 (67)
25 2kt2_A Mercuric reductase; nme 99.1 2.1E-10 7.2E-15 75.7 7.7 62 12-74 3-67 (69)
26 1qup_A Superoxide dismutase 1 99.1 2E-10 7E-15 96.9 9.5 71 8-79 5-75 (222)
27 1yg0_A COP associated protein; 99.1 1.9E-10 6.4E-15 74.8 6.7 61 10-71 2-65 (66)
28 2ldi_A Zinc-transporting ATPas 99.1 2.1E-10 7E-15 75.0 6.7 64 8-72 2-69 (71)
29 1jww_A Potential copper-transp 99.1 4.3E-10 1.5E-14 76.1 8.2 68 8-76 2-73 (80)
30 1yjr_A Copper-transporting ATP 99.1 3.5E-10 1.2E-14 75.4 7.4 65 9-74 4-72 (75)
31 1jk9_B CCS, copper chaperone f 99.0 5.5E-10 1.9E-14 95.9 8.6 68 8-76 6-73 (249)
32 1p6t_A Potential copper-transp 99.0 5.9E-10 2E-14 84.8 7.8 70 8-78 73-146 (151)
33 2ofg_X Zinc-transporting ATPas 99.0 1.1E-09 3.8E-14 81.4 9.0 67 7-74 6-76 (111)
34 2ew9_A Copper-transporting ATP 99.0 1E-09 3.6E-14 82.8 8.5 65 9-74 80-148 (149)
35 2kkh_A Putative heavy metal tr 99.0 1.9E-09 6.5E-14 77.0 9.1 70 6-76 13-86 (95)
36 2aj0_A Probable cadmium-transp 98.9 1.7E-09 5.8E-14 72.4 5.4 59 9-72 3-62 (71)
37 2rop_A Copper-transporting ATP 98.9 7.1E-09 2.4E-13 83.7 9.0 67 9-76 122-192 (202)
38 2ew9_A Copper-transporting ATP 98.8 1.2E-08 4.1E-13 76.9 8.6 67 8-75 3-73 (149)
39 2rop_A Copper-transporting ATP 98.6 1.4E-07 4.9E-12 75.9 7.8 66 7-73 18-90 (202)
40 1p6t_A Potential copper-transp 98.5 3.1E-07 1.1E-11 69.5 7.6 63 8-71 5-71 (151)
41 3j09_A COPA, copper-exporting 98.4 7.7E-07 2.6E-11 85.8 8.5 63 9-72 2-68 (723)
42 3bpd_A Uncharacterized protein 90.2 1.3 4.4E-05 33.1 7.5 69 6-75 4-80 (100)
43 2x3d_A SSO6206; unknown functi 86.9 2.6 9E-05 31.2 7.2 66 8-75 4-79 (96)
44 2raq_A Conserved protein MTH88 86.9 2.1 7.3E-05 31.7 6.7 67 7-74 5-79 (97)
45 3cq1_A Putative uncharacterize 84.7 0.84 2.9E-05 33.1 3.6 35 10-44 42-82 (103)
46 3lno_A Putative uncharacterize 84.2 0.85 2.9E-05 33.5 3.5 37 9-45 44-87 (108)
47 1uwd_A Hypothetical protein TM 81.7 0.96 3.3E-05 32.7 2.9 36 9-44 42-83 (103)
48 2jsx_A Protein NAPD; TAT, proo 66.2 19 0.00064 26.0 6.5 45 20-64 16-61 (95)
49 1t1v_A SH3BGRL3, SH3 domain-bi 57.6 17 0.00059 24.8 4.8 49 9-68 2-55 (93)
50 2k1h_A Uncharacterized protein 43.8 46 0.0016 24.0 5.3 39 24-64 39-79 (94)
51 2cpq_A FragIle X mental retard 39.4 91 0.0031 22.3 6.3 59 5-64 11-73 (91)
52 4gwb_A Peptide methionine sulf 37.7 81 0.0028 25.1 6.4 45 20-64 9-71 (168)
53 2ko1_A CTR148A, GTP pyrophosph 36.6 75 0.0026 20.7 5.3 32 10-41 46-77 (88)
54 1fvg_A Peptide methionine sulf 36.6 75 0.0026 26.1 6.1 52 8-64 43-116 (199)
55 3bqh_A PILB, peptide methionin 36.1 78 0.0027 25.8 6.1 45 20-64 9-75 (193)
56 1jdq_A TM006 protein, hypothet 35.3 1.1E+02 0.0038 21.7 6.3 54 11-74 27-83 (98)
57 3hz7_A Uncharacterized protein 34.8 55 0.0019 22.8 4.5 51 13-74 4-59 (87)
58 2wci_A Glutaredoxin-4; redox-a 33.9 31 0.0011 26.0 3.2 34 9-44 35-73 (135)
59 1dtj_A RNA-binding neurooncolo 33.7 1E+02 0.0034 20.2 5.5 52 9-63 3-66 (76)
60 2yy3_A Elongation factor 1-bet 33.5 64 0.0022 23.2 4.6 36 7-42 49-86 (91)
61 3h8q_A Thioredoxin reductase 3 33.2 42 0.0014 23.7 3.7 53 8-69 16-68 (114)
62 3ctg_A Glutaredoxin-2; reduced 31.0 44 0.0015 24.5 3.6 53 9-69 37-92 (129)
63 3l4n_A Monothiol glutaredoxin- 30.8 23 0.0008 26.3 2.0 56 6-69 11-68 (127)
64 2nyt_A Probable C->U-editing e 30.6 45 0.0015 26.9 3.8 60 10-75 84-146 (190)
65 3e0m_A Peptide methionine sulf 30.0 96 0.0033 27.2 6.0 52 8-64 2-73 (313)
66 3lvj_C Sulfurtransferase TUSA; 29.7 1.3E+02 0.0045 20.3 5.9 55 10-74 10-67 (82)
67 2jsx_A Protein NAPD; TAT, proo 29.5 95 0.0033 22.1 5.0 36 9-44 42-77 (95)
68 2cte_A Vigilin; K homology typ 29.0 69 0.0024 22.4 4.2 50 3-53 11-67 (94)
69 1wik_A Thioredoxin-like protei 28.8 35 0.0012 23.9 2.5 35 9-45 15-54 (109)
70 1pqx_A Conserved hypothetical 28.5 43 0.0015 24.1 3.0 40 24-65 39-80 (91)
71 1ff3_A Peptide methionine sulf 28.5 1.2E+02 0.0042 25.0 6.2 51 9-64 43-115 (211)
72 2wem_A Glutaredoxin-related pr 27.8 52 0.0018 24.0 3.5 40 18-69 34-74 (118)
73 2ct6_A SH3 domain-binding glut 27.8 72 0.0025 22.5 4.2 47 10-67 9-60 (111)
74 2hze_A Glutaredoxin-1; thiored 27.0 1E+02 0.0035 21.4 4.9 29 7-37 17-45 (114)
75 1r7h_A NRDH-redoxin; thioredox 26.9 78 0.0027 19.5 3.9 32 11-44 3-34 (75)
76 1nwa_A Peptide methionine sulf 26.9 1.3E+02 0.0044 24.8 6.0 51 9-64 26-94 (203)
77 2hh2_A KH-type splicing regula 26.1 66 0.0023 23.1 3.7 51 9-63 7-70 (107)
78 2p2r_A Poly(RC)-binding protei 25.4 1.1E+02 0.0037 20.2 4.5 51 8-61 4-63 (76)
79 2j89_A Methionine sulfoxide re 25.3 1.4E+02 0.0049 25.5 6.1 52 8-64 94-167 (261)
80 2khp_A Glutaredoxin; thioredox 24.5 89 0.0031 20.4 4.0 34 9-44 6-39 (92)
81 3ipz_A Monothiol glutaredoxin- 23.1 68 0.0023 22.6 3.2 25 18-44 32-56 (109)
82 1j5k_A Heterogeneous nuclear r 22.5 1.9E+02 0.0064 19.7 5.5 45 8-53 13-66 (89)
83 2qip_A Protein of unknown func 22.3 33 0.0011 26.2 1.5 33 45-77 110-142 (165)
84 3gx8_A Monothiol glutaredoxin- 22.3 73 0.0025 23.1 3.4 40 18-69 30-72 (121)
85 3v4k_A DNA DC->DU-editing enzy 22.2 1.7E+02 0.0058 24.0 5.8 63 9-76 100-163 (203)
86 1h75_A Glutaredoxin-like prote 22.1 1.1E+02 0.0036 19.4 3.9 27 16-44 8-34 (81)
87 1u6t_A SH3 domain-binding glut 21.9 1E+02 0.0035 23.0 4.2 34 11-45 2-40 (121)
88 1je3_A EC005, hypothetical 8.6 21.4 1.7E+02 0.0057 20.8 5.1 53 12-74 29-84 (97)
89 3pro_C Alpha-lytic protease; P 21.3 1.3E+02 0.0045 23.7 4.9 34 34-68 114-148 (166)
90 2fwh_A Thiol:disulfide interch 21.0 2E+02 0.0069 20.0 5.5 36 9-44 32-74 (134)
91 1wh9_A 40S ribosomal protein S 20.7 1.2E+02 0.004 21.5 4.1 35 34-68 23-69 (92)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.60 E-value=3.8e-15 Score=101.59 Aligned_cols=67 Identities=21% Similarity=0.395 Sum_probs=63.2
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 76 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p 76 (198)
+++++|+|+|+|.+|+.+|+++|.+++|| ++.+|+.+++++|++.+++..|+++|+ ++||.+.++++
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence 45788999999999999999999999999 999999999999999999999999999 99999999876
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.50 E-value=9.5e-14 Score=95.03 Aligned_cols=67 Identities=22% Similarity=0.370 Sum_probs=63.1
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCC-CccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcC
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~-GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
+.+++|+|+|+|.+|+.+|+++|.+++ ||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeee
Confidence 567889999999999999999999999 999999999999999999899999999999 9999998764
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.46 E-value=3.7e-13 Score=90.50 Aligned_cols=65 Identities=22% Similarity=0.408 Sum_probs=60.9
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe--eeCCHHHHHHHHHhccCCceEEc
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK--GTMDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~--G~vdp~~L~~~L~kk~G~~aeiV 74 (198)
++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|. +.+++..|+++|+ ++||.++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence 57899997 99999999999999999999999999999999999 6689999999999 999998764
No 4
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.42 E-value=7.1e-13 Score=90.45 Aligned_cols=67 Identities=9% Similarity=0.238 Sum_probs=61.8
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcC
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
|++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... +++..|+++|+ ++||.+.++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEcc
Confidence 467899996 9999999999999999999999999999999999853 68999999999 9999998874
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.40 E-value=7.7e-13 Score=90.98 Aligned_cols=67 Identities=18% Similarity=0.375 Sum_probs=63.0
Q ss_pred cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150 7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 76 (198)
Q Consensus 7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p 76 (198)
.+++++|.|. |+|.+|+.+|+++|.+ +||.++.||+.+++++|... ++..|+++|+ ++||.+.++++
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~~ 70 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRSS 70 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECCS
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecCc
Confidence 4678999997 9999999999999999 99999999999999999988 9999999999 99999998865
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.6e-12 Score=95.58 Aligned_cols=71 Identities=18% Similarity=0.371 Sum_probs=65.3
Q ss_pred cceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCCCC
Q 029150 7 LQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKK 78 (198)
Q Consensus 7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p~k 78 (198)
.+.+++|+|.|+|.+|+.+|+++|.+++||.+|.||+.+++++|.+.+++..|+.+|+ ++||.+.++....
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGS 87 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCC
Confidence 3467889999999999999999999999999999999999999999899999999998 9999999876544
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.29 E-value=6.2e-12 Score=83.39 Aligned_cols=63 Identities=30% Similarity=0.492 Sum_probs=58.1
Q ss_pred EEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEc
Q 029150 11 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 11 vvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV 74 (198)
++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|.+.|. ++||.+..+
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~ 65 (66)
T 2roe_A 2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL 65 (66)
T ss_dssp BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence 358886 999999999999999999999999999999999977789999999999 999988765
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.29 E-value=4.6e-12 Score=82.12 Aligned_cols=61 Identities=20% Similarity=0.366 Sum_probs=56.8
Q ss_pred EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCce
Q 029150 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV 71 (198)
Q Consensus 10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~a 71 (198)
+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|...|+ .+||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 4678996 999999999999999999999999999999999998889999999998 899875
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.23 E-value=4.7e-11 Score=79.14 Aligned_cols=64 Identities=19% Similarity=0.421 Sum_probs=57.6
Q ss_pred cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCce
Q 029150 7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNV 71 (198)
Q Consensus 7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~a 71 (198)
.+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|+..|. .+||.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence 3567899996 9999999999999999999999999999999999843 67899999998 899865
No 10
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.22 E-value=7.6e-11 Score=77.72 Aligned_cols=66 Identities=20% Similarity=0.348 Sum_probs=58.0
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEc
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV 74 (198)
+++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.++
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~ 70 (71)
T 2xmw_A 2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 70 (71)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence 356789997 9999999999999999999999999999999999854 67889999998 899987653
No 11
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.22 E-value=6.8e-11 Score=78.39 Aligned_cols=66 Identities=18% Similarity=0.347 Sum_probs=59.0
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV 74 (198)
.++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.++
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1aw0_A 2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS 71 (72)
T ss_dssp CEEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred CeEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence 356789996 9999999999999999999999999999999999864 67889999998 899987664
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.22 E-value=6.9e-11 Score=78.35 Aligned_cols=66 Identities=24% Similarity=0.304 Sum_probs=59.2
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV 74 (198)
+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence 457889996 9999999999999999999999999999999999854 67889999998 899987654
No 13
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.20 E-value=2.3e-11 Score=87.04 Aligned_cols=65 Identities=20% Similarity=0.256 Sum_probs=58.5
Q ss_pred ccceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCce
Q 029150 6 VLQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV 71 (198)
Q Consensus 6 ~~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~a 71 (198)
..+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...+++..|+++|. .+||.+
T Consensus 19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~ 84 (85)
T 2k2p_A 19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP 84 (85)
T ss_dssp ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 45677899996 999999999999999999999999999999999998899999999998 899865
No 14
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.19 E-value=1.4e-10 Score=77.91 Aligned_cols=66 Identities=15% Similarity=0.253 Sum_probs=58.3
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeC-CHHHHHHHHHhccCCceEEc
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTM-DVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~v-dp~~L~~~L~kk~G~~aeiV 74 (198)
|++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.... ....|...|. .+||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence 567899997 99999999999999999999999999999999998653 3678888898 899987654
No 15
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.19 E-value=8.9e-11 Score=83.88 Aligned_cols=70 Identities=17% Similarity=0.276 Sum_probs=61.0
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhcc---CCceEEcCCCCC
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKL---KRNVEVVPAKKD 79 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~---G~~aeiV~p~k~ 79 (198)
++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .+++..|..+|. .+ ||.+.++.+...
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~~~~ 79 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSEVEI 79 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCCC--
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCCCcc
Confidence 56789996 999999999999999999999999999999999985 367889999998 88 599988876543
No 16
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.18 E-value=1.2e-10 Score=75.29 Aligned_cols=63 Identities=17% Similarity=0.356 Sum_probs=56.2
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCce
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNV 71 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~a 71 (198)
|.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 67 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence 356789997 9999999999999999999999999999999999843 67889999998 899865
No 17
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.18 E-value=9.1e-11 Score=81.85 Aligned_cols=71 Identities=18% Similarity=0.282 Sum_probs=63.0
Q ss_pred ccceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcCCC
Q 029150 6 VLQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPAK 77 (198)
Q Consensus 6 ~~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~p~ 77 (198)
....+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... +++..|...|. .+||.+.++...
T Consensus 6 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQP 80 (84)
T ss_dssp SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCT
T ss_pred cCceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCCc
Confidence 45678899996 9999999999999999999999999999999999864 57899999998 999998876543
No 18
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.17 E-value=2.3e-10 Score=76.89 Aligned_cols=65 Identities=17% Similarity=0.325 Sum_probs=58.5
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV 74 (198)
.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 70 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIH 70 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEee
Confidence 45789996 9999999999999999999999999999999999853 57899999998 899988764
No 19
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.17 E-value=1.3e-10 Score=79.12 Aligned_cols=68 Identities=16% Similarity=0.278 Sum_probs=60.7
Q ss_pred cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcC
Q 029150 7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
...+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.+..
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 77 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence 3567889996 9999999999999999999999999999999999853 57889999998 8999987754
No 20
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.16 E-value=1e-10 Score=77.49 Aligned_cols=66 Identities=17% Similarity=0.320 Sum_probs=59.3
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEcC
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.++.
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~ 70 (72)
T 1fvq_A 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR 70 (72)
T ss_dssp EEEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence 46789996 9999999999999999999999999999999999853 67889999998 8999988763
No 21
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.16 E-value=1.5e-10 Score=75.68 Aligned_cols=63 Identities=21% Similarity=0.453 Sum_probs=56.7
Q ss_pred EEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150 11 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 11 vvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV 74 (198)
++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.++++
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 68 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI 68 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcccC
Confidence 367886 9999999999999999999999999999999999864 67899999998 899988764
No 22
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.15 E-value=8.7e-11 Score=79.78 Aligned_cols=67 Identities=12% Similarity=0.366 Sum_probs=60.4
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcC
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
|++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... +++..|...|. .+||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECC
Confidence 567889996 9999999999999999999999999999999999853 67889999998 8999987754
No 23
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.14 E-value=1.7e-10 Score=76.78 Aligned_cols=66 Identities=18% Similarity=0.380 Sum_probs=59.0
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEc
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV 74 (198)
+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+..++++|.. .++...|...|. .+||.+.++
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 74 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE 74 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence 567889997 999999999999999999999999999999999974 367889999998 899987654
No 24
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.12 E-value=8.1e-11 Score=78.29 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=55.3
Q ss_pred EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEc
Q 029150 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV 74 (198)
+++|.|. |+|.+|+.+|+++|.++ ||.++.+|+.+++++|....+ ..|...|+ .+||.+..+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~~ 64 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVESY 64 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCBC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceeeE
Confidence 4678995 99999999999999999 999999999999999987755 88999998 899987543
No 25
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.12 E-value=2.1e-10 Score=75.73 Aligned_cols=62 Identities=19% Similarity=0.326 Sum_probs=55.8
Q ss_pred EEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEc
Q 029150 12 VLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 12 vLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV 74 (198)
+|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... .+...|+..|. .+||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence 57886 9999999999999999999999999999999999754 57899999998 999987654
No 26
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.12 E-value=2e-10 Score=96.86 Aligned_cols=71 Identities=18% Similarity=0.429 Sum_probs=64.8
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCCCCC
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKD 79 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p~k~ 79 (198)
..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++.....
T Consensus 5 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP 75 (222)
T ss_dssp CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred ceEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCCc
Confidence 456788899999999999999999999999999999999999999899999999999 99999988765443
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.10 E-value=1.9e-10 Score=74.77 Aligned_cols=61 Identities=20% Similarity=0.341 Sum_probs=54.6
Q ss_pred EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCce
Q 029150 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNV 71 (198)
Q Consensus 10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~a 71 (198)
+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... .+...|.+.|+ .+||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence 4678886 9999999999999999999999999999999999854 47889999998 888864
No 28
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.10 E-value=2.1e-10 Score=75.00 Aligned_cols=64 Identities=17% Similarity=0.321 Sum_probs=57.1
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceE
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVE 72 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~ae 72 (198)
+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence 456789997 9999999999999999999999999999999999853 57788999998 8999764
No 29
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.09 E-value=4.3e-10 Score=76.07 Aligned_cols=68 Identities=24% Similarity=0.393 Sum_probs=60.3
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcCC
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPA 76 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~p 76 (198)
|.++.|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|...|. .+||.+.++..
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~~ 73 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE 73 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECCS
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecCc
Confidence 457789997 999999999999999999999999999999999974 367889999998 89999877643
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.08 E-value=3.5e-10 Score=75.42 Aligned_cols=65 Identities=17% Similarity=0.395 Sum_probs=57.4
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV 74 (198)
.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... +++..|...|. .+||.+.+.
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 72 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLV 72 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEES
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceee
Confidence 45788996 9999999999999999999999999999999999864 46788999998 899987654
No 31
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.03 E-value=5.5e-10 Score=95.92 Aligned_cols=68 Identities=18% Similarity=0.441 Sum_probs=63.1
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 76 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p 76 (198)
..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++..
T Consensus 6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~ 73 (249)
T 1jk9_B 6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGA 73 (249)
T ss_dssp CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEE
T ss_pred ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccC
Confidence 456788889999999999999999999999999999999999998899999999999 99999987654
No 32
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.03 E-value=5.9e-10 Score=84.76 Aligned_cols=70 Identities=23% Similarity=0.391 Sum_probs=62.3
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcCCCC
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPAKK 78 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~p~k 78 (198)
..+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .+++..|+++|. .+||.+.++.+..
T Consensus 73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~~ 146 (151)
T 1p6t_A 73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQD 146 (151)
T ss_dssp CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSSS
T ss_pred ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCccc
Confidence 356789996 999999999999999999999999999999999984 478999999998 9999998875543
No 33
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.03 E-value=1.1e-09 Score=81.41 Aligned_cols=67 Identities=16% Similarity=0.239 Sum_probs=59.9
Q ss_pred cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150 7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV 74 (198)
.+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|+..|. .+||.+...
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 76 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLAEP 76 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHH-TTTCCEECC
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HcCCeeeec
Confidence 3577899996 9999999999999999999999999999999999854 57889999998 999987643
No 34
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.01 E-value=1e-09 Score=82.81 Aligned_cols=65 Identities=14% Similarity=0.386 Sum_probs=59.0
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV 74 (198)
.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... +++..|++.|. .+||.+.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence 56889996 9999999999999999999999999999999999854 68899999998 999987654
No 35
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.00 E-value=1.9e-09 Score=76.99 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=62.0
Q ss_pred ccceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcCC
Q 029150 6 VLQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPA 76 (198)
Q Consensus 6 ~~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~p 76 (198)
..+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+..++++|... +++..|...|. .+||.+.++..
T Consensus 13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 86 (95)
T 2kkh_A 13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVN 86 (95)
T ss_dssp SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCC
T ss_pred cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecC
Confidence 35678899996 9999999999999999999999999999999999854 57889999998 89999877644
No 36
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.91 E-value=1.7e-09 Score=72.37 Aligned_cols=59 Identities=19% Similarity=0.416 Sum_probs=50.7
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceE
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE 72 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~ae 72 (198)
++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..+ ...|. .+||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~~ 62 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFEH 62 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTTT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCcc
Confidence 46789997 999999999999999999999999999999999997764 44666 7777543
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.87 E-value=7.1e-09 Score=83.68 Aligned_cols=67 Identities=22% Similarity=0.424 Sum_probs=59.7
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcCC
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPA 76 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~p 76 (198)
.+++|+|. |+|.+|+.+|+++|.+++||.++.||+.+++++|... +++..|+..|. .+||.+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence 56889996 9999999999999999999999999999999999853 68899999998 89999988754
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.84 E-value=1.2e-08 Score=76.93 Aligned_cols=67 Identities=21% Similarity=0.389 Sum_probs=60.3
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcC
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
+++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .+++..|..+|. .+||.+.++.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence 678899996 999999999999999999999999999999999975 367889999998 8999887754
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.57 E-value=1.4e-07 Score=75.94 Aligned_cols=66 Identities=23% Similarity=0.349 Sum_probs=56.2
Q ss_pred cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhcc---CCceEE
Q 029150 7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKL---KRNVEV 73 (198)
Q Consensus 7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~---G~~aei 73 (198)
.+.+++|.|. |+|.+|+.+|+++|.+++||.++.||+.+++++|... +++..|...|. .+ |+.+.+
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~~ 90 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVSL 90 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEEC
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEEe
Confidence 3567889997 9999999999999999999999999999999999854 67889999998 66 366643
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.50 E-value=3.1e-07 Score=69.48 Aligned_cols=63 Identities=19% Similarity=0.402 Sum_probs=55.2
Q ss_pred ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCce
Q 029150 8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNV 71 (198)
Q Consensus 8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~a 71 (198)
+++++|.|. |+|.+|+.+|+++|.+++||.++.+++.+++++|... ++...|...|. .+|+.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence 456789996 9999999999999999999999999999999998743 57888999998 888854
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.37 E-value=7.7e-07 Score=85.81 Aligned_cols=63 Identities=14% Similarity=0.350 Sum_probs=57.6
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceE
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVE 72 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~ae 72 (198)
++++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|+. .++++.|++.|+ ++||++.
T Consensus 2 m~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~ 68 (723)
T 3j09_A 2 MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVV 68 (723)
T ss_dssp CCEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEES
T ss_pred eeEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccc
Confidence 35789997 999999999999999999999999999999999974 378999999999 8999874
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=90.19 E-value=1.3 Score=33.06 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=49.6
Q ss_pred ccceEEEEEEeecChhHHHHHHHHHhcCCCccEEEE-----eCCCC--eEEEeee-CCHHHHHHHHHhccCCceEEcC
Q 029150 6 VLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTI-----DGGKD--LVTVKGT-MDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 6 ~~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~--kVtV~G~-vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
-..+.++|-|----+--.-.+-+.|.+++||..|.+ |..+. ++||.|. +|-+.|.++|. .+|-.+.++.
T Consensus 4 ~~iRRlVLDVlKPh~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSID 80 (100)
T 3bpd_A 4 KGLRRLVLDVLKPHEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD 80 (100)
T ss_dssp CSEEEEEEEEEEESCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred ccceEEEEEecCCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 345778888852234445578888999999888764 44444 3456676 99999999999 9998876653
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=86.95 E-value=2.6 Score=31.18 Aligned_cols=66 Identities=18% Similarity=0.328 Sum_probs=48.2
Q ss_pred ceEEEEEEe--ecChhHHHHHHHHHhcCCCccEEEE-----eCCCC--eEEEeee-CCHHHHHHHHHhccCCceEEcC
Q 029150 8 QSTVVLKIR--LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKD--LVTVKGT-MDVKELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 8 ~~tvvLkV~--MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~--kVtV~G~-vdp~~L~~~L~kk~G~~aeiV~ 75 (198)
.+.++|-|- +|-..- -.+-+.|.+++||..|.+ |..+. ++||.|. +|-+.|.++|. ++|-.+.++.
T Consensus 4 irRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID 79 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID 79 (96)
T ss_dssp EEEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred eEEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 467778774 455544 467788999999888764 33433 3456686 99999999999 8998877663
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=86.93 E-value=2.1 Score=31.74 Aligned_cols=67 Identities=25% Similarity=0.365 Sum_probs=47.9
Q ss_pred cceEEEEEEeecChhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeee-CCHHHHHHHHHhccCCceEEc
Q 029150 7 LQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~k--VtV~G~-vdp~~L~~~L~kk~G~~aeiV 74 (198)
..+.++|-|----+--.-.+-+.|.++.||..|.+ |..+.. +||.|. +|-+.|.++|. .+|-.+.++
T Consensus 5 ~irRlVLDVlKPh~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSI 79 (97)
T 2raq_A 5 GLIRIVLDILKPHEPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSV 79 (97)
T ss_dssp SEEEEEEEEECCSCSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEE
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEee
Confidence 35677887752233345577888999999887764 444444 455676 99999999999 899887665
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=84.69 E-value=0.84 Score=33.12 Aligned_cols=35 Identities=17% Similarity=0.478 Sum_probs=28.4
Q ss_pred EEEEEEeecChhHH------HHHHHHHhcCCCccEEEEeCC
Q 029150 10 TVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 10 tvvLkV~MhC~gCa------~kI~kaL~kl~GV~sV~VD~~ 44 (198)
.+.+.+.+.+.+|. ..|+.+|..++||.+|.|++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 56677778887774 678999999999999988854
No 46
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=84.22 E-value=0.85 Score=33.54 Aligned_cols=37 Identities=19% Similarity=0.465 Sum_probs=29.4
Q ss_pred eEEEEEEeecChhH------HHHHHHHH-hcCCCccEEEEeCCC
Q 029150 9 STVVLKIRLHCEGC------ISKIKKII-YKTKGVDNVTIDGGK 45 (198)
Q Consensus 9 ~tvvLkV~MhC~gC------a~kI~kaL-~kl~GV~sV~VD~~~ 45 (198)
..+.+.+.++..+| ...|+.+| ..++||.+|.|++.-
T Consensus 44 ~~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 44 NNAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp CCEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred CeEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 45777777877777 56789999 899999999887653
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=81.74 E-value=0.96 Score=32.74 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=27.9
Q ss_pred eEEEEEEeecChhHH------HHHHHHHhcCCCccEEEEeCC
Q 029150 9 STVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa------~kI~kaL~kl~GV~sV~VD~~ 44 (198)
..+.+.+.+++.+|. ..|+.+|..++||.+|.|++.
T Consensus 42 ~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 42 NNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp CEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred CEEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 456677777777664 568899999999999988754
No 48
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=66.24 E-value=19 Score=25.99 Aligned_cols=45 Identities=18% Similarity=0.198 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe-eeCCHHHHHHHHH
Q 029150 20 EGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK-GTMDVKELVPYLK 64 (198)
Q Consensus 20 ~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~-G~vdp~~L~~~L~ 64 (198)
.+=...|..+|..++||+-..+|...+++.|+ -.-+...|.+.|.
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 45578999999999999543456656777766 3456666666665
No 49
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=57.59 E-value=17 Score=24.75 Aligned_cols=49 Identities=14% Similarity=0.092 Sum_probs=33.0
Q ss_pred eEEEEEEeecChhHH-----HHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccC
Q 029150 9 STVVLKIRLHCEGCI-----SKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLK 68 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa-----~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G 68 (198)
.+|+|-..-.|..|. .++++.|.. .||.-..+|+..+ ..+++.|.+.+|
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~-~~i~~~~~di~~~----------~~~~~~l~~~~g 55 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDG-KRIQYQLVDISQD----------NALRDEMRTLAG 55 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHH-TTCCCEEEETTSC----------HHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHH-CCCceEEEECCCC----------HHHHHHHHHHhC
Confidence 345565567899997 788888876 4777666666543 245666665666
No 50
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=43.84 E-value=46 Score=24.02 Aligned_cols=39 Identities=15% Similarity=0.416 Sum_probs=30.5
Q ss_pred HHHHHHHhcCCCccEEEEeCCCCeEEEee--eCCHHHHHHHHH
Q 029150 24 SKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLK 64 (198)
Q Consensus 24 ~kI~kaL~kl~GV~sV~VD~~~~kVtV~G--~vdp~~L~~~L~ 64 (198)
.-+-+.|-.++||.+|-+. .+=|||+- .++.+.|...|.
T Consensus 39 SPLA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~ 79 (94)
T 2k1h_A 39 PEFINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIE 79 (94)
T ss_dssp CHHHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHH
Confidence 3466667799999998775 88999984 478888877776
No 51
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=39.36 E-value=91 Score=22.28 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=36.6
Q ss_pred cccceEEEEEEe---ecCh-hHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHH
Q 029150 5 CVLQSTVVLKIR---LHCE-GCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLK 64 (198)
Q Consensus 5 ~~~~~tvvLkV~---MhC~-gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~ 64 (198)
+......+|+|+ +-+- |=-.+.-+.|....||.++.++-..++|+|.|. +.+.+.+++.
T Consensus 11 ~~~~~i~~i~I~~dkIg~vIG~gGk~Ik~I~e~tGv~~IdI~eddG~V~I~g~-~~ea~~~A~~ 73 (91)
T 2cpq_A 11 LAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGE-SADAVKKARG 73 (91)
T ss_dssp SSCSEEEEEECCHHHHHHHHTTTTHHHHHHHTSTTEEEEEEETTTTEEEEEES-SHHHHHHHHH
T ss_pred ccCceEEEEEEChHHhhhhcCCCcHHHHHHHHHhCCeEEEEEcCCCEEEEEEC-CHHHHHHHHH
Confidence 344556677774 2221 222334445667789977999876799999984 5666555554
No 52
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=37.74 E-value=81 Score=25.12 Aligned_cols=45 Identities=13% Similarity=0.231 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCC---------------eEEEeee---CCHHHHHHHHH
Q 029150 20 EGCISKIKKIIYKTKGVDNVTIDGGKD---------------LVTVKGT---MDVKELVPYLK 64 (198)
Q Consensus 20 ~gCa~kI~kaL~kl~GV~sV~VD~~~~---------------kVtV~G~---vdp~~L~~~L~ 64 (198)
.||=--++..+.+++||.++.+-.+++ -|.|+-+ ++-..|++..-
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 577777888899999999999988655 3445543 67778888765
No 53
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=36.63 E-value=75 Score=20.69 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=22.3
Q ss_pred EEEEEEeecChhHHHHHHHHHhcCCCccEEEE
Q 029150 10 TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTI 41 (198)
Q Consensus 10 tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~V 41 (198)
.++|.|...-..-...+.+.|.+++||.+|..
T Consensus 46 ~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 46 TCNLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 34555555555566788888999999987754
No 54
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=36.62 E-value=75 Score=26.06 Aligned_cols=52 Identities=19% Similarity=0.262 Sum_probs=36.4
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCe-------------------EEEeee---CCHHHHHHHHH
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDL-------------------VTVKGT---MDVKELVPYLK 64 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~k-------------------VtV~G~---vdp~~L~~~L~ 64 (198)
+++++|- .||=.-++..+.+++||.++.+-.+.+. |.|+-+ ++-..|++..-
T Consensus 43 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 43 TQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp CEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred ceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 3555554 5666667777889999999999876554 455543 67777777765
No 55
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=36.12 E-value=78 Score=25.82 Aligned_cols=45 Identities=16% Similarity=0.320 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCCe-------------------EEEeee---CCHHHHHHHHH
Q 029150 20 EGCISKIKKIIYKTKGVDNVTIDGGKDL-------------------VTVKGT---MDVKELVPYLK 64 (198)
Q Consensus 20 ~gCa~kI~kaL~kl~GV~sV~VD~~~~k-------------------VtV~G~---vdp~~L~~~L~ 64 (198)
.||=--++..+.+++||.++.+-.+.+. |.|+-+ ++-..|+...-
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 5666667777889999999998876553 445533 67778777665
No 56
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=35.30 E-value=1.1e+02 Score=21.73 Aligned_cols=54 Identities=20% Similarity=0.208 Sum_probs=37.9
Q ss_pred EEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEc
Q 029150 11 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 11 vvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV 74 (198)
.+|-+. +.|+.-.-+++++|.+++- .+.+.|..+ .....|.++++ ..|+.+...
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~-~~G~~v~~~ 83 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVK-KLGHEVLEI 83 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHH-HSSCCEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 455554 9999999999999998642 223344433 34577888887 999988764
No 57
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=34.77 E-value=55 Score=22.81 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=36.3
Q ss_pred EEEe-ecChhHHHHHHHHHhcCC--CccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEc
Q 029150 13 LKIR-LHCEGCISKIKKIIYKTK--GVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 13 LkV~-MhC~gCa~kI~kaL~kl~--GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV 74 (198)
|.+. +.|+.-.-+++++|.+++ | +.+.|..+ .....|..+++ ..|+.+...
T Consensus 4 lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~-~~G~~v~~~ 59 (87)
T 3hz7_A 4 IDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAE-GMGYQSEYL 59 (87)
T ss_dssp EECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHH-HHTCEEEEE
T ss_pred EEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 4443 899999999999999873 4 23333332 34567888887 999988664
No 58
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=33.91 E-value=31 Score=25.96 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=22.3
Q ss_pred eEEEEEEe-----ecChhHHHHHHHHHhcCCCccEEEEeCC
Q 029150 9 STVVLKIR-----LHCEGCISKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 9 ~tvvLkV~-----MhC~gCa~kI~kaL~kl~GV~sV~VD~~ 44 (198)
..|+|-.. -.|..|. ++++.|..+ ||.-..+|+.
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~-~ak~~L~~~-gv~y~~vdI~ 73 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSA-QAVQALAAC-GERFAYVDIL 73 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHH-HHHHHHHTT-CSCCEEEEGG
T ss_pred CCEEEEEEecCCCCCCccHH-HHHHHHHHc-CCceEEEECC
Confidence 34555443 4799999 678888765 7765555553
No 59
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=33.74 E-value=1e+02 Score=20.21 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=32.6
Q ss_pred eEEEEEEeecChhHH----HHHHHHHhcCCCccEEEEeCC--------CCeEEEeeeCCHHHHHHHH
Q 029150 9 STVVLKIRLHCEGCI----SKIKKIIYKTKGVDNVTIDGG--------KDLVTVKGTMDVKELVPYL 63 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa----~kI~kaL~kl~GV~sV~VD~~--------~~kVtV~G~vdp~~L~~~L 63 (198)
.++.|.|+-..-++. .+.-+.|+...|+. +.++-. ...|+|.|+ +..+..++
T Consensus 3 ~~~~i~Ip~~~vg~IIGkgG~~Ik~I~~~tga~-I~i~~~~~~~~~~~~~~v~I~G~--~~~v~~A~ 66 (76)
T 1dtj_A 3 ELVEMAVPENLVGAILGKGGKTLVEYQELTGAR-IQISKKGEFLPGTRNRRVTITGS--PAATQAAQ 66 (76)
T ss_dssp EEEEEEEETTTHHHHHCSTTHHHHHHHHHHCCE-EEECCTTCCSTTCCEEEEEEEES--HHHHHHHH
T ss_pred eEEEEEEChHHcceEECCCchHHHHHHHHhCCE-EEECcCCCCCCCCceeEEEEEeC--HHHHHHHH
Confidence 356777776666666 34445577777874 777753 257889997 44444443
No 60
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=33.50 E-value=64 Score=23.19 Aligned_cols=36 Identities=6% Similarity=0.064 Sum_probs=27.9
Q ss_pred cceEEEEEEeecChhH--HHHHHHHHhcCCCccEEEEe
Q 029150 7 LQSTVVLKIRLHCEGC--ISKIKKIIYKTKGVDNVTID 42 (198)
Q Consensus 7 ~~~tvvLkV~MhC~gC--a~kI~kaL~kl~GV~sV~VD 42 (198)
....+.+.+-|-.+.+ ...|+.+|+.+.||+||.|-
T Consensus 49 Glk~L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 49 GLVALKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp SCEEEEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEE
T ss_pred ceeeEEEEEEEECCCccccHHHHHHHhcCCCceEEEEE
Confidence 4456666666666644 89999999999999999874
No 61
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=33.20 E-value=42 Score=23.75 Aligned_cols=53 Identities=19% Similarity=0.263 Sum_probs=33.4
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCC
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~ 69 (198)
..+|++-..-.|..|. ++++.|.++ ||.-..+|+.. ..+...+.+.|.+.+|.
T Consensus 16 ~~~v~vy~~~~Cp~C~-~ak~~L~~~-~i~~~~~dvd~-------~~~~~~~~~~l~~~~g~ 68 (114)
T 3h8q_A 16 RSRVVIFSKSYCPHST-RVKELFSSL-GVECNVLELDQ-------VDDGARVQEVLSEITNQ 68 (114)
T ss_dssp HCSEEEEECTTCHHHH-HHHHHHHHT-TCCCEEEETTT-------STTHHHHHHHHHHHHSC
T ss_pred cCCEEEEEcCCCCcHH-HHHHHHHHc-CCCcEEEEecC-------CCChHHHHHHHHHHhCC
Confidence 3456665567899997 777888765 66544444432 13566777777545554
No 62
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=31.01 E-value=44 Score=24.48 Aligned_cols=53 Identities=11% Similarity=0.199 Sum_probs=31.7
Q ss_pred eEEEEEEeecChhHHHHHHHHHhcCCC---ccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCC
Q 029150 9 STVVLKIRLHCEGCISKIKKIIYKTKG---VDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa~kI~kaL~kl~G---V~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~ 69 (198)
..|+|-..-.|..|.+-|+..|..+ | |.-..+|+... .+...+...|.+.+|.
T Consensus 37 ~~Vvvy~~~~Cp~C~~a~k~~L~~~-~~~~i~~~~vdvd~~-------~~~~~~~~~L~~~~g~ 92 (129)
T 3ctg_A 37 KEVFVAAKTYCPYCKATLSTLFQEL-NVPKSKALVLELDEM-------SNGSEIQDALEEISGQ 92 (129)
T ss_dssp SSEEEEECTTCHHHHHHHHHHHTTS-CCCGGGEEEEEGGGS-------TTHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCCchHHHHHHHHHhc-CccCCCcEEEEcccc-------CCHHHHHHHHHHHhCC
Confidence 4566666688999996658888765 5 54333443221 1334566666655664
No 63
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=30.82 E-value=23 Score=26.32 Aligned_cols=56 Identities=16% Similarity=0.130 Sum_probs=34.1
Q ss_pred ccceEEEEEEeecChhHHHHHHHHHhcCC--CccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCC
Q 029150 6 VLQSTVVLKIRLHCEGCISKIKKIIYKTK--GVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69 (198)
Q Consensus 6 ~~~~tvvLkV~MhC~gCa~kI~kaL~kl~--GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~ 69 (198)
..+..|+|-..-.|..|. ++++.|.+.. ||.-..+|+. -..+...+.+.|.+.+|+
T Consensus 11 i~~~~Vvvysk~~Cp~C~-~ak~lL~~~~~~~v~~~~idid-------~~~d~~~~~~~l~~~~G~ 68 (127)
T 3l4n_A 11 LDLSPIIIFSKSTCSYSK-GMKELLENEYQFIPNYYIIELD-------KHGHGEELQEYIKLVTGR 68 (127)
T ss_dssp HTSCSEEEEECTTCHHHH-HHHHHHHHHEEEESCCEEEEGG-------GSTTHHHHHHHHHHHHSC
T ss_pred HccCCEEEEEcCCCccHH-HHHHHHHHhcccCCCcEEEEec-------CCCCHHHHHHHHHHHcCC
Confidence 345567776678899998 7778887631 3322222222 224667788888755565
No 64
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=30.65 E-value=45 Score=26.91 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=41.4
Q ss_pred EEEEEEee-cChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCH--HHHHHHHHhccCCceEEcC
Q 029150 10 TVVLKIRL-HCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDV--KELVPYLKEKLKRNVEVVP 75 (198)
Q Consensus 10 tvvLkV~M-hC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp--~~L~~~L~kk~G~~aeiV~ 75 (198)
.++|-|.+ -|..|+..|-.+|...+||..|.+-... -...++ ...+..|+ ..|-.|+++.
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d-----~~~~~p~~~~g~~~L~-~aGI~V~~~~ 146 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRL-----FMWEEPEIQAALKKLK-EAGCKLRIMK 146 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeec-----CCcCChHHHHHHHHHH-HCCCEEEEec
Confidence 56777774 6999999999999999999887652110 000122 35667777 8888887664
No 65
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=29.95 E-value=96 Score=27.18 Aligned_cols=52 Identities=17% Similarity=0.324 Sum_probs=37.8
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCe-----------------EEEeee---CCHHHHHHHHH
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDL-----------------VTVKGT---MDVKELVPYLK 64 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~k-----------------VtV~G~---vdp~~L~~~L~ 64 (198)
+++++|- .||=--++..+.+++||.++.+-.+.+. |.|+-+ ++-..|++..-
T Consensus 2 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 2 MAEIYLA-----GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CEEEEEE-----CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred ccEEEEe-----cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 3455554 6777778888999999999999886554 455543 67778877665
No 66
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=29.66 E-value=1.3e+02 Score=20.33 Aligned_cols=55 Identities=7% Similarity=0.195 Sum_probs=37.8
Q ss_pred EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEc
Q 029150 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV 74 (198)
..+|-+. +.|+.-.-+++++|.+++- .+.+.|..+ .....|..+++ ..|+.+...
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~-~~G~~~~~~ 67 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCT-FMEHELVAK 67 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHH-HTTCEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 3455554 9999999999999998741 223333332 34567777777 999988765
No 67
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=29.47 E-value=95 Score=22.14 Aligned_cols=36 Identities=8% Similarity=0.108 Sum_probs=26.4
Q ss_pred eEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCC
Q 029150 9 STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~ 44 (198)
-++++.|.-.+..=..++-+.|++++||.++..=+.
T Consensus 42 GkiVV~iEa~~~~~l~~~i~~I~~i~GVlst~lvy~ 77 (95)
T 2jsx_A 42 GQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYH 77 (95)
T ss_dssp TEEEEEEEESSHHHHHHHHHHHTTSTTEEEEEESSC
T ss_pred CCEEEEEEeCCHHHHHHHHHHHhcCCCccEEeEEEE
Confidence 367777876665555555589999999999887553
No 68
>2cte_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=28.97 E-value=69 Score=22.36 Aligned_cols=50 Identities=10% Similarity=0.123 Sum_probs=29.4
Q ss_pred cccccceEEEEEEeecChhHH----HHHHHHHhcCCCccEEEEeCC---CCeEEEeee
Q 029150 3 NTCVLQSTVVLKIRLHCEGCI----SKIKKIIYKTKGVDNVTIDGG---KDLVTVKGT 53 (198)
Q Consensus 3 ~~~~~~~tvvLkV~MhC~gCa----~kI~kaL~kl~GV~sV~VD~~---~~kVtV~G~ 53 (198)
..+....+..|.|+-..-+.. .+.-+.|....|+. +.++-. .+.|+|.|.
T Consensus 11 ~~l~~~~t~~i~Ip~~~ig~IIG~gG~~Ik~I~~etg~~-I~i~~~~~~~~~V~I~G~ 67 (94)
T 2cte_A 11 ARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATK-IQIPRPDDPSNQIKITGT 67 (94)
T ss_dssp CCCCSCEEEEEECCTTTHHHHHCSSSCHHHHHHHHTTCC-CBCCCTTSSCCEEEEEEC
T ss_pred HHhCCceEEEEEEChHHeeeeECCCChhHHHHHHHHCCE-EEeCCCCCCCCeEEEEEC
Confidence 344455667777765554544 23334455556775 555432 579999997
No 69
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=28.77 E-value=35 Score=23.93 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=24.1
Q ss_pred eEEEEEEe-----ecChhHHHHHHHHHhcCCCccEEEEeCCC
Q 029150 9 STVVLKIR-----LHCEGCISKIKKIIYKTKGVDNVTIDGGK 45 (198)
Q Consensus 9 ~tvvLkV~-----MhC~gCa~kI~kaL~kl~GV~sV~VD~~~ 45 (198)
..|+|-.. -+|..|. ++++.|..+ ||.-..+|+..
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~-~ak~~L~~~-~i~~~~vdi~~ 54 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSK-QILEILNST-GVEYETFDILE 54 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHH-HHHHHHHHT-CSCEEEEESSS
T ss_pred CCEEEEEecCCCCCCCchHH-HHHHHHHHc-CCCeEEEECCC
Confidence 34555555 7899998 677777765 77766666653
No 70
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=28.51 E-value=43 Score=24.06 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=29.7
Q ss_pred HHHHHHHhcCCCccEEEEeCCCCeEEEee--eCCHHHHHHHHHh
Q 029150 24 SKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKE 65 (198)
Q Consensus 24 ~kI~kaL~kl~GV~sV~VD~~~~kVtV~G--~vdp~~L~~~L~k 65 (198)
.-+-+.|-.++||.+|-+. .+=|||+- .++.+.|...|..
T Consensus 39 SPLA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 39 PAFINDILKVEGVKSIFHV--MDFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp CHHHHHHHHSTTEEEEEEE--TTEEEEEECTTSCSTTTHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 3455667789999998775 88999984 4677777776663
No 71
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=28.50 E-value=1.2e+02 Score=24.96 Aligned_cols=51 Identities=10% Similarity=0.199 Sum_probs=35.7
Q ss_pred eEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCe-------------------EEEeee---CCHHHHHHHHH
Q 029150 9 STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDL-------------------VTVKGT---MDVKELVPYLK 64 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~k-------------------VtV~G~---vdp~~L~~~L~ 64 (198)
++++|- .||=.-++..+.+++||.++.+-.+.+. |.|+-+ ++-..|++..-
T Consensus 43 ~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~ 115 (211)
T 1ff3_A 43 EIAIFA-----MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFW 115 (211)
T ss_dssp EEEEEE-----CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred eEEEEe-----cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 455554 5666667778899999999998876442 445543 66778877765
No 72
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=27.79 E-value=52 Score=23.97 Aligned_cols=40 Identities=20% Similarity=0.182 Sum_probs=25.0
Q ss_pred cChhHHHHHHHHHhcCCCcc-EEEEeCCCCeEEEeeeCCHHHHHHHHHhccCC
Q 029150 18 HCEGCISKIKKIIYKTKGVD-NVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69 (198)
Q Consensus 18 hC~gCa~kI~kaL~kl~GV~-sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~ 69 (198)
.|..|. ++++.|.++ ||. -..+|+.. + ..+++.|.+.+|+
T Consensus 34 ~Cp~C~-~ak~lL~~~-gv~~~~~vdV~~---------d-~~~~~~l~~~tg~ 74 (118)
T 2wem_A 34 QCGFSN-AVVQILRLH-GVRDYAAYNVLD---------D-PELRQGIKDYSNW 74 (118)
T ss_dssp SSHHHH-HHHHHHHHT-TCCCCEEEESSS---------C-HHHHHHHHHHHTC
T ss_pred ccHHHH-HHHHHHHHc-CCCCCEEEEcCC---------C-HHHHHHHHHHhCC
Confidence 799998 778888765 773 45555542 2 3455666544454
No 73
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.77 E-value=72 Score=22.53 Aligned_cols=47 Identities=6% Similarity=0.041 Sum_probs=31.5
Q ss_pred EEEEEEeecChhHHH-----HHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhcc
Q 029150 10 TVVLKIRLHCEGCIS-----KIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67 (198)
Q Consensus 10 tvvLkV~MhC~gCa~-----kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~ 67 (198)
.|+|-..-.|..|.. ++++.|... ||.-..+|+.. ++ .+++.|.+++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI~~---------~~-~~~~~l~~~~ 60 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDITM---------SE-EQRQWMYKNV 60 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEETTT---------CH-HHHHHHHHSC
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-CCCEEEEECCC---------CH-HHHHHHHHHh
Confidence 455555678999996 888888764 78766677654 32 4556666453
No 74
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=26.95 E-value=1e+02 Score=21.42 Aligned_cols=29 Identities=17% Similarity=0.341 Sum_probs=18.9
Q ss_pred cceEEEEEEeecChhHHHHHHHHHhcCCCcc
Q 029150 7 LQSTVVLKIRLHCEGCISKIKKIIYKTKGVD 37 (198)
Q Consensus 7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~ 37 (198)
....|++-..-.|..|. +++..|.++ |+.
T Consensus 17 ~~~~vv~f~~~~Cp~C~-~~~~~L~~~-~~~ 45 (114)
T 2hze_A 17 ANNKVTIFVKYTCPFCR-NALDILNKF-SFK 45 (114)
T ss_dssp CTTCEEEEECTTCHHHH-HHHHHHTTS-CBC
T ss_pred ccCCEEEEEeCCChhHH-HHHHHHHHc-CCC
Confidence 33445554457899998 667777654 555
No 75
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=26.93 E-value=78 Score=19.51 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=20.3
Q ss_pred EEEEEeecChhHHHHHHHHHhcCCCccEEEEeCC
Q 029150 11 VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 11 vvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~ 44 (198)
+++-..-.|..|. +++..|..+ ||.-..+|..
T Consensus 3 i~~y~~~~C~~C~-~~~~~l~~~-~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCT-ATKKALDRA-GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHH-HHHHHHHHT-TCCCEEEETT
T ss_pred EEEEeCCCChHHH-HHHHHHHHc-CCCcEEEECC
Confidence 3333346899998 577777765 6665555554
No 76
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=26.87 E-value=1.3e+02 Score=24.75 Aligned_cols=51 Identities=18% Similarity=0.328 Sum_probs=35.7
Q ss_pred eEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCC---------------eEEEeee---CCHHHHHHHHH
Q 029150 9 STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKD---------------LVTVKGT---MDVKELVPYLK 64 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~---------------kVtV~G~---vdp~~L~~~L~ 64 (198)
++++|- .||=--++..+.+++||.++.+-.+.+ -|.|+-+ ++-..|++..-
T Consensus 26 ~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 26 QKAILA-----GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp EEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ceEEEe-----cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 556654 566666777889999999999887654 3445533 66677777765
No 77
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=26.07 E-value=66 Score=23.06 Aligned_cols=51 Identities=20% Similarity=0.296 Sum_probs=31.0
Q ss_pred eEEEEEEeecChhHH-----HHHHHHHhcCCCccEEEEeCCC--------CeEEEeeeCCHHHHHHHH
Q 029150 9 STVVLKIRLHCEGCI-----SKIKKIIYKTKGVDNVTIDGGK--------DLVTVKGTMDVKELVPYL 63 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa-----~kI~kaL~kl~GV~sV~VD~~~--------~kVtV~G~vdp~~L~~~L 63 (198)
.+++|.|.-..-++. ..|++ |++..|+. |.|+-.. ..|+|.|+ ++.+..++
T Consensus 7 ~~~~i~IP~~~vG~IIGkgG~~Ik~-I~~~TGa~-I~I~~~~~~~~~~~~r~V~I~G~--~e~v~~A~ 70 (107)
T 2hh2_A 7 GEMTFSIPTHKCGLVIGRGGENVKA-INQQTGAF-VEISRQLPPNGDPNFKLFIIRGS--PQQIDHAK 70 (107)
T ss_dssp CCEEEEEEGGGTTTTSTTTTCHHHH-HHHHSSSE-EEECCCCCTTCCTTEEEEEEESC--HHHHHHHH
T ss_pred CeEEEEECHHHcCccCCCCcHHHHH-HHHHhCCE-EEEcCccCCCCCCCceEEEEECC--HHHHHHHH
Confidence 367778875555554 34444 66667884 7777542 57888884 44444333
No 78
>2p2r_A Poly(RC)-binding protein 2; protein-DNA complex, RNA and DNA binding protein/DNA complex; 1.60A {Homo sapiens}
Probab=25.42 E-value=1.1e+02 Score=20.17 Aligned_cols=51 Identities=22% Similarity=0.313 Sum_probs=29.8
Q ss_pred ceEEEEEEeecChhHH----HHHHHHHhcCCCccEEEEeC-----CCCeEEEeeeCCHHHHHH
Q 029150 8 QSTVVLKIRLHCEGCI----SKIKKIIYKTKGVDNVTIDG-----GKDLVTVKGTMDVKELVP 61 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa----~kI~kaL~kl~GV~sV~VD~-----~~~kVtV~G~vdp~~L~~ 61 (198)
..++.|.|+-..-++. .+.-+.|+...|+. +.++- ....|+|.|+ ++.+..
T Consensus 4 ~~~~~i~Ip~~~vg~iIGkgG~~Ik~I~~~tga~-I~i~~~~~~~~~~~v~I~G~--~~~v~~ 63 (76)
T 2p2r_A 4 TTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ-IKIANPVEGSTDRQVTITGS--AASISL 63 (76)
T ss_dssp CEEEEEEEEHHHHHHHHCGGGHHHHHHHHHHCCE-EEECCCCTTCSEEEEEEEEC--HHHHHH
T ss_pred ceEEEEEEChHHcceEECCCChHHHHHHHHHCCE-EEEcCCCCCCCeEEEEEEeC--HHHHHH
Confidence 3456667764444444 33444566667874 66764 2577889997 444433
No 79
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=25.35 E-value=1.4e+02 Score=25.49 Aligned_cols=52 Identities=19% Similarity=0.271 Sum_probs=36.3
Q ss_pred ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCe-------------------EEEeee---CCHHHHHHHHH
Q 029150 8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDL-------------------VTVKGT---MDVKELVPYLK 64 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~k-------------------VtV~G~---vdp~~L~~~L~ 64 (198)
+++++|- .||=.-+++.+.+++||.++.+-.+.+. |.|+-+ ++-.+|++..-
T Consensus 94 ~e~a~fA-----gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 94 QQFAQFG-----AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp CEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CeEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4556654 5666667778899999999999876554 455543 56677777655
No 80
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=24.51 E-value=89 Score=20.42 Aligned_cols=34 Identities=24% Similarity=0.479 Sum_probs=22.1
Q ss_pred eEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCC
Q 029150 9 STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 9 ~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~ 44 (198)
..+++-..-.|..|. +++..|... ||.-..+|..
T Consensus 6 ~~v~ly~~~~C~~C~-~~~~~L~~~-~i~~~~~di~ 39 (92)
T 2khp_A 6 VDVIIYTRPGCPYCA-RAKALLARK-GAEFNEIDAS 39 (92)
T ss_dssp CCEEEEECTTCHHHH-HHHHHHHHT-TCCCEEEEST
T ss_pred ccEEEEECCCChhHH-HHHHHHHHc-CCCcEEEECC
Confidence 345554457899998 677777664 6665555554
No 81
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=23.09 E-value=68 Score=22.55 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=17.7
Q ss_pred cChhHHHHHHHHHhcCCCccEEEEeCC
Q 029150 18 HCEGCISKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 18 hC~gCa~kI~kaL~kl~GV~sV~VD~~ 44 (198)
.|..|. ++++.|... ||.-..+|+.
T Consensus 32 ~Cp~C~-~ak~~L~~~-gi~~~~~dI~ 56 (109)
T 3ipz_A 32 MCGFSN-TVVQILKNL-NVPFEDVNIL 56 (109)
T ss_dssp SSHHHH-HHHHHHHHT-TCCCEEEEGG
T ss_pred CChhHH-HHHHHHHHc-CCCcEEEECC
Confidence 799998 677777664 7765555553
No 82
>1j5k_A Heterogeneous nuclear ribonucleoprotein K; single-stranded DNA binding protein, transcription factor, hnRNP K, CT element, C-MYC oncogene; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1khm_A
Probab=22.51 E-value=1.9e+02 Score=19.69 Aligned_cols=45 Identities=27% Similarity=0.364 Sum_probs=26.7
Q ss_pred ceEEEEEEeecChhHH----HHHHHHHhcCCCccEEEEeCC-----CCeEEEeee
Q 029150 8 QSTVVLKIRLHCEGCI----SKIKKIIYKTKGVDNVTIDGG-----KDLVTVKGT 53 (198)
Q Consensus 8 ~~tvvLkV~MhC~gCa----~kI~kaL~kl~GV~sV~VD~~-----~~kVtV~G~ 53 (198)
..+++|.|.-..-++. .+.-+.|++..|+. +.++-. ...|+|.|+
T Consensus 13 ~~~~~i~Ip~~~vg~IIGkgG~~Ik~I~~~tga~-I~I~~~~~~~~~~~v~I~G~ 66 (89)
T 1j5k_A 13 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS-IKIDEPLEGSEDRIITITGT 66 (89)
T ss_dssp EEEEEEEEEHHHHHHHHCGGGHHHHHHHHHTCCE-EEECSCCSSSSEEEEEEEEE
T ss_pred eEEEEEEEChhhcceeECCCCHhHHHHHHHhCCe-EEecCCCCCCCccEEEEEcC
Confidence 3455666654433333 23344466667884 777753 477889997
No 83
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=22.33 E-value=33 Score=26.23 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=26.0
Q ss_pred CCeEEEeeeCCHHHHHHHHHhccCCceEEcCCC
Q 029150 45 KDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAK 77 (198)
Q Consensus 45 ~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p~ 77 (198)
..-|.|+|+-|-..++.+|+++.|++|.+++.+
T Consensus 110 d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~ 142 (165)
T 2qip_A 110 DRVILVSGDGDFSLLVERIQQRYNKKVTVYGVP 142 (165)
T ss_dssp SEEEEECCCGGGHHHHHHHHHHHCCEEEEEECG
T ss_pred CEEEEEECChhHHHHHHHHHHHcCcEEEEEeCC
Confidence 334557789999999999993369999999763
No 84
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=22.32 E-value=73 Score=23.06 Aligned_cols=40 Identities=23% Similarity=0.155 Sum_probs=24.1
Q ss_pred cChhHHHHHHHHHhcCCCcc---EEEEeCCCCeEEEeeeCCHHHHHHHHHhccCC
Q 029150 18 HCEGCISKIKKIIYKTKGVD---NVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69 (198)
Q Consensus 18 hC~gCa~kI~kaL~kl~GV~---sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~ 69 (198)
.|..|. ++++.|... ||. -..+|+.. + ..++..|.+.+|.
T Consensus 30 ~Cp~C~-~ak~lL~~~-gv~~~~~~~~dv~~---------~-~~~~~~l~~~sg~ 72 (121)
T 3gx8_A 30 KCGFSR-ATIGLLGNQ-GVDPAKFAAYNVLE---------D-PELREGIKEFSEW 72 (121)
T ss_dssp CTTHHH-HHHHHHHHH-TBCGGGEEEEECTT---------C-HHHHHHHHHHHTC
T ss_pred CCccHH-HHHHHHHHc-CCCcceEEEEEecC---------C-HHHHHHHHHHhCC
Confidence 799998 667777654 675 34455432 2 3456666545554
No 85
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=22.25 E-value=1.7e+02 Score=24.02 Aligned_cols=63 Identities=17% Similarity=0.198 Sum_probs=40.3
Q ss_pred eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150 9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 76 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p 76 (198)
-.|+.-|. --|..|+++|..-|..-+.|. ..|- ..++--. .-+-.+-+..|. .+|-++.+...
T Consensus 100 Y~vTwy~SWSPC~~CA~~v~~FL~~~~~v~-L~If--~aRLY~~-~~~~~~gLr~L~-~aG~~v~iM~~ 163 (203)
T 3v4k_A 100 YRVTCFTSWSPCFSCAQEMAKFISKNKHVS-LCIK--TARIYDD-QGRCQEGLRTLA-EAGAKISIMTY 163 (203)
T ss_pred EEEEEEEeCCChHHHHHHHHHHHhhCCCeE-EEEE--EEeeccc-CchHHHHHHHHH-HCCCeEEecCH
Confidence 45566666 569999999999999998885 4442 1122211 223344556666 67888877754
No 86
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=22.09 E-value=1.1e+02 Score=19.36 Aligned_cols=27 Identities=26% Similarity=0.412 Sum_probs=17.9
Q ss_pred eecChhHHHHHHHHHhcCCCccEEEEeCC
Q 029150 16 RLHCEGCISKIKKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 16 ~MhC~gCa~kI~kaL~kl~GV~sV~VD~~ 44 (198)
.-.|..|. +++..|.++ ||.-..+|..
T Consensus 8 ~~~C~~C~-~~~~~l~~~-~i~~~~vdi~ 34 (81)
T 1h75_A 8 RNDCVQCH-ATKRAMENR-GFDFEMINVD 34 (81)
T ss_dssp CTTCHHHH-HHHHHHHHT-TCCCEEEETT
T ss_pred CCCChhHH-HHHHHHHHC-CCCeEEEECC
Confidence 46799997 577777664 6655555544
No 87
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=21.88 E-value=1e+02 Score=22.97 Aligned_cols=34 Identities=6% Similarity=-0.021 Sum_probs=24.9
Q ss_pred EEEEEeecChhHH-----HHHHHHHhcCCCccEEEEeCCC
Q 029150 11 VVLKIRLHCEGCI-----SKIKKIIYKTKGVDNVTIDGGK 45 (198)
Q Consensus 11 vvLkV~MhC~gCa-----~kI~kaL~kl~GV~sV~VD~~~ 45 (198)
|++-+.-.|..|. .++++.|.. .||.-.++|+..
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~lL~~-kgV~feEidI~~ 40 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGFLEA-NKIGFEEKDIAA 40 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHHHH-TTCCEEEEECTT
T ss_pred EEEEecCCCCCccchHHHHHHHHHHHH-CCCceEEEECCC
Confidence 4555568899997 778777654 689877788753
No 88
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=21.44 E-value=1.7e+02 Score=20.79 Aligned_cols=53 Identities=13% Similarity=0.073 Sum_probs=35.2
Q ss_pred EEEEe-ecChhHHHHHHHHHhcCC-C-ccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEc
Q 029150 12 VLKIR-LHCEGCISKIKKIIYKTK-G-VDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV 74 (198)
Q Consensus 12 vLkV~-MhC~gCa~kI~kaL~kl~-G-V~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV 74 (198)
+|-+. +.|+.-.-+++++|.+++ | +..|.+|- ......|.++++ ..|+.+..+
T Consensus 29 ~LD~rGl~CP~PvlktkkaL~~l~~Ge~L~Vl~dd---------~~a~~dIp~~~~-~~G~~v~~~ 84 (97)
T 1je3_A 29 RLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDC---------PQSINNIPLDAR-NHGYTVLDI 84 (97)
T ss_dssp EECSBCCSSSSSTHHHHHHTTTCCSSCEEEEEEBC---------SSSSCHHHHHHH-HHTCSEEEE
T ss_pred EEeCCCCCCCHHHHHHHHHHHcCCCCCEEEEEECC---------cchHHHHHHHHH-HCCCEEEEE
Confidence 34443 899999999999998774 2 33333321 134466777777 899988654
No 89
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=21.27 E-value=1.3e+02 Score=23.72 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=23.9
Q ss_pred CCccEEEEeCCCCeEEEeee-CCHHHHHHHHHhccC
Q 029150 34 KGVDNVTIDGGKDLVTVKGT-MDVKELVPYLKEKLK 68 (198)
Q Consensus 34 ~GV~sV~VD~~~~kVtV~G~-vdp~~L~~~L~kk~G 68 (198)
.||.++.||..+++|+|+.. -........++ ..|
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~-~AG 148 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGATDAGVDFVA-LSG 148 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCHHHHHHHHH-HHT
T ss_pred CCCceEEEeCCCCeEEEEeCCCChHHHHHHHH-HhC
Confidence 46889999999999999875 23444444444 555
No 90
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=21.02 E-value=2e+02 Score=20.04 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=21.7
Q ss_pred eEEEEEEe-ecChhHHHHH------HHHHhcCCCccEEEEeCC
Q 029150 9 STVVLKIR-LHCEGCISKI------KKIIYKTKGVDNVTIDGG 44 (198)
Q Consensus 9 ~tvvLkV~-MhC~gCa~kI------~kaL~kl~GV~sV~VD~~ 44 (198)
+.++|..- -.|..|..-. .+....+++|.-+.||..
T Consensus 32 k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~ 74 (134)
T 2fwh_A 32 KPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 74 (134)
T ss_dssp SCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECT
T ss_pred CcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCC
Confidence 34555553 6799998633 233345567777777764
No 91
>1wh9_A 40S ribosomal protein S3; KH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ribosome; NMR {Homo sapiens} SCOP: d.52.3.1
Probab=20.75 E-value=1.2e+02 Score=21.55 Aligned_cols=35 Identities=14% Similarity=0.305 Sum_probs=27.5
Q ss_pred CCccEEEEeCCCCeEEEe----------ee--CCHHHHHHHHHhccC
Q 029150 34 KGVDNVTIDGGKDLVTVK----------GT--MDVKELVPYLKEKLK 68 (198)
Q Consensus 34 ~GV~sV~VD~~~~kVtV~----------G~--vdp~~L~~~L~kk~G 68 (198)
.||..|++....+++.|+ |. .+..+|...|.+.++
T Consensus 23 aGis~IeIeR~~~~i~I~I~tarPg~vIGkkG~~Ie~L~~~l~k~~~ 69 (92)
T 1wh9_A 23 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFG 69 (92)
T ss_dssp TTEEEEEEEECSSCEEEEEEESCHHHHHCGGGHHHHHHHHHHHHHHC
T ss_pred CceeeEEEEECCCeEEEEEEeCCCceEEcCCcHHHHHHHHHHHHHhC
Confidence 699999999999999886 11 246778888887775
Done!