Query 029152
Match_columns 198
No_of_seqs 226 out of 2153
Neff 8.8
Searched_HMMs 13730
Date Mon Mar 25 13:25:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029152.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029152hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.9 2.5E-22 1.8E-26 135.9 11.1 77 63-139 17-93 (96)
2 d1wf2a_ d.58.7.1 (A:) Heteroge 99.9 4.1E-22 3E-26 135.4 12.0 80 58-139 9-89 (98)
3 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 6.2E-22 4.5E-26 132.4 12.0 82 60-141 4-89 (90)
4 d1whwa_ d.58.7.1 (A:) Probable 99.9 1.1E-21 8.2E-26 133.4 12.6 79 62-140 6-90 (99)
5 d2cq3a1 d.58.7.1 (A:110-202) R 99.9 1.9E-21 1.4E-25 130.8 13.5 82 58-139 5-90 (93)
6 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 4.5E-22 3.3E-26 130.8 10.0 74 64-137 2-81 (82)
7 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 6.7E-22 4.9E-26 132.2 10.7 79 61-139 5-89 (90)
8 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 5.5E-22 4E-26 132.4 10.1 79 62-140 3-87 (89)
9 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 7.9E-22 5.8E-26 129.5 10.4 74 64-137 2-81 (82)
10 d2cpja1 d.58.7.1 (A:65-150) No 99.9 7.9E-22 5.8E-26 130.8 10.5 77 63-139 7-83 (86)
11 d2cpda1 d.58.7.1 (A:223-308) A 99.9 1.3E-21 9.7E-26 129.6 11.6 82 59-140 3-84 (86)
12 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 1.5E-21 1.1E-25 131.3 11.9 79 61-139 4-88 (93)
13 d2cpza1 d.58.7.1 (A:383-484) C 99.9 1.3E-21 9.8E-26 133.7 11.5 79 62-140 16-100 (102)
14 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 9.4E-22 6.8E-26 131.0 10.3 79 60-138 3-87 (88)
15 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 9.8E-22 7.1E-26 132.2 10.5 78 62-139 7-90 (93)
16 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.9 3.7E-21 2.7E-25 129.8 13.2 78 61-138 11-91 (95)
17 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 3.7E-21 2.7E-25 138.6 13.0 81 61-141 39-125 (139)
18 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.9 1.6E-21 1.1E-25 127.3 9.7 75 62-138 3-77 (79)
19 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.9 4.1E-22 2.9E-26 130.5 6.8 76 65-140 2-78 (80)
20 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 1.9E-21 1.4E-25 129.8 9.5 77 64-140 8-88 (89)
21 d2cpha1 d.58.7.1 (A:454-547) P 99.8 3.4E-21 2.5E-25 129.7 10.9 79 61-139 5-91 (94)
22 d1whxa_ d.58.7.1 (A:) Probable 99.8 1.3E-21 9.7E-26 135.6 8.7 78 62-139 8-85 (111)
23 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 4.5E-21 3.3E-25 130.1 11.1 80 60-140 11-90 (98)
24 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 2.7E-21 1.9E-25 129.2 9.6 79 62-140 3-87 (90)
25 d1whya_ d.58.7.1 (A:) Putative 99.8 1E-20 7.3E-25 128.2 12.4 78 61-138 14-93 (97)
26 d1wg1a_ d.58.7.1 (A:) Probable 99.8 6.1E-21 4.4E-25 127.0 10.6 76 63-139 4-79 (88)
27 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 8.5E-21 6.2E-25 124.9 11.1 77 60-136 4-82 (83)
28 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 1.1E-20 8.1E-25 129.3 12.0 80 59-139 5-90 (103)
29 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 3.2E-21 2.3E-25 127.5 8.7 75 65-139 2-82 (85)
30 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 3.5E-21 2.6E-25 128.1 8.8 78 62-141 3-81 (88)
31 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 5.5E-21 4E-25 125.2 9.4 74 64-137 1-80 (81)
32 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 8.6E-21 6.3E-25 123.4 10.0 72 66-137 2-78 (78)
33 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 4.5E-20 3.3E-24 126.4 14.1 83 58-140 9-93 (104)
34 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 6.6E-21 4.8E-25 125.9 9.3 72 67-138 1-81 (85)
35 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 7.1E-21 5.2E-25 124.4 9.1 71 66-136 2-78 (80)
36 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 3.3E-20 2.4E-24 127.0 12.7 78 62-141 13-97 (104)
37 d3begb1 d.58.7.1 (B:121-207) S 99.8 2.2E-21 1.6E-25 128.9 5.9 74 65-139 1-74 (87)
38 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 1.6E-20 1.2E-24 128.4 10.5 76 64-140 20-101 (103)
39 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 1.3E-20 9.7E-25 124.5 9.6 74 62-135 4-85 (85)
40 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 2.8E-20 2.1E-24 129.4 11.7 75 63-137 6-83 (114)
41 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 6.2E-20 4.5E-24 122.0 12.8 80 60-139 4-85 (88)
42 d1fxla2 d.58.7.1 (A:119-203) H 99.8 1.3E-20 9.7E-25 124.5 9.1 73 63-135 5-85 (85)
43 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 1.4E-20 1E-24 127.2 9.0 83 58-140 10-93 (96)
44 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 4.5E-20 3.3E-24 123.2 11.3 77 62-140 6-88 (90)
45 d2cqca1 d.58.7.1 (A:109-191) A 99.8 2.3E-20 1.7E-24 122.7 9.7 70 63-132 8-83 (83)
46 d2cpea1 d.58.7.1 (A:353-453) R 99.8 2.2E-20 1.6E-24 127.2 9.9 82 58-139 2-97 (101)
47 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 4.2E-20 3E-24 125.1 11.1 80 60-139 4-95 (98)
48 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.8E-20 1.3E-24 123.3 9.0 75 67-141 1-82 (83)
49 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 5.8E-20 4.2E-24 118.5 11.0 71 67-138 1-71 (75)
50 d2adca1 d.58.7.1 (A:335-443) P 99.8 3.1E-20 2.2E-24 128.2 10.0 76 64-139 2-79 (109)
51 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 4.1E-20 3E-24 121.9 9.8 73 63-136 5-83 (84)
52 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 5.3E-21 3.9E-25 131.1 5.6 79 62-140 6-90 (104)
53 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 6.6E-21 4.8E-25 130.0 6.0 75 63-138 17-97 (101)
54 d2adca2 d.58.7.1 (A:444-531) P 99.8 5.7E-20 4.1E-24 122.1 10.2 77 62-138 8-87 (88)
55 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 5.2E-20 3.8E-24 121.9 9.6 75 63-138 3-85 (86)
56 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1E-20 7.6E-25 122.7 5.9 70 65-135 1-76 (77)
57 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.8 7.7E-20 5.6E-24 124.2 10.3 79 60-138 14-95 (99)
58 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 6.7E-20 4.9E-24 122.6 9.7 78 63-140 2-86 (91)
59 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 1.2E-19 8.5E-24 118.1 10.1 71 64-135 2-78 (79)
60 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 1.5E-20 1.1E-24 125.8 5.6 78 60-138 9-91 (91)
61 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 6.3E-20 4.6E-24 118.4 8.2 69 66-135 1-75 (75)
62 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 9.2E-20 6.7E-24 124.2 8.6 78 60-137 14-96 (101)
63 d1weza_ d.58.7.1 (A:) Heteroge 99.8 1.8E-19 1.3E-23 123.0 9.5 81 57-139 8-93 (102)
64 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 4.6E-20 3.4E-24 119.0 5.9 69 66-135 1-75 (75)
65 d2msta_ d.58.7.1 (A:) Neural R 99.8 1E-19 7.3E-24 117.3 7.5 69 66-135 1-75 (75)
66 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 4.5E-20 3.3E-24 125.9 5.8 78 63-140 17-100 (102)
67 d1weya_ d.58.7.1 (A:) Calcipre 99.8 3.1E-19 2.2E-23 122.2 9.3 79 62-140 3-86 (104)
68 d1x4da1 d.58.7.1 (A:8-96) Matr 99.8 6.8E-19 5E-23 117.1 10.7 78 61-138 5-85 (89)
69 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 1.6E-18 1.2E-22 118.6 12.3 80 59-139 10-95 (104)
70 d2adba1 d.58.7.1 (A:177-284) P 99.8 3.1E-19 2.2E-23 123.0 8.6 79 62-140 5-87 (108)
71 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 3.5E-19 2.5E-23 120.2 8.6 77 64-140 1-87 (96)
72 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 7.4E-19 5.4E-23 115.9 9.8 73 63-136 5-82 (85)
73 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 5.3E-19 3.9E-23 113.9 8.8 70 65-135 1-74 (75)
74 d2cpia1 d.58.7.1 (A:101-189) E 99.8 4.7E-19 3.4E-23 117.9 8.0 71 63-133 7-89 (89)
75 d2cqpa1 d.58.7.1 (A:917-1002) 99.7 3.2E-18 2.4E-22 113.0 8.6 73 63-135 8-86 (86)
76 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 1.2E-18 8.7E-23 111.3 5.6 65 67-131 1-71 (72)
77 d2cpya1 d.58.7.1 (A:536-638) R 99.7 1.9E-17 1.4E-21 112.8 8.5 76 61-137 5-86 (103)
78 d2cq2a1 d.58.7.1 (A:25-125) Al 99.7 7E-17 5.1E-21 109.6 8.0 64 62-125 16-81 (101)
79 d1owxa_ d.58.7.1 (A:) Lupus LA 99.7 1E-16 7.6E-21 111.0 8.4 74 64-137 11-85 (113)
80 d1wela1 d.58.7.1 (A:412-523) R 99.7 4.9E-17 3.6E-21 112.5 6.2 76 61-137 15-96 (112)
81 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 1.1E-18 8E-23 116.3 -2.9 71 65-136 2-83 (90)
82 d1u1qa_ d.58.7.1 (A:) Nuclear 99.6 8.2E-16 6E-20 114.5 10.2 79 59-138 92-176 (183)
83 d1wwha1 d.58.7.1 (A:169-249) N 99.6 3.6E-16 2.6E-20 101.7 6.9 73 63-137 3-76 (81)
84 d1jmta_ d.58.7.3 (A:) d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=2.5e-22 Score=135.93 Aligned_cols=77 Identities=35% Similarity=0.702 Sum_probs=73.5
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
..++|||+|||..+++++|+++|++||.|.+|+|+++||||||+|.+.++|++|+..|++..|+|+.|+|+|+++..
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p 93 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 93 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999998643
No 2
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.1e-22 Score=135.37 Aligned_cols=80 Identities=31% Similarity=0.574 Sum_probs=71.6
Q ss_pred CCCCCCCCeEEEcCCC-CCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 58 SEGDSSNTTIFVGGLD-PNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 58 ~~~~~~~~~lfV~~l~-~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
.+.....++|||+||+ ..+++++|+++|++||.|.+|+|. |+||||+|.+.++|++||+.||+..|.|+.|+|+|++
T Consensus 9 ~~~~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~--rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 86 (98)
T d1wf2a_ 9 TDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH--KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAA 86 (98)
T ss_dssp CCCSSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE--TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETT
T ss_pred CCCCCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe--CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3444556789999997 568899999999999999999994 7999999999999999999999999999999999998
Q ss_pred CCC
Q 029152 137 NPA 139 (198)
Q Consensus 137 ~~~ 139 (198)
++.
T Consensus 87 ~~~ 89 (98)
T d1wf2a_ 87 EPK 89 (98)
T ss_dssp SCC
T ss_pred CCC
Confidence 653
No 3
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=6.2e-22 Score=132.42 Aligned_cols=82 Identities=32% Similarity=0.514 Sum_probs=74.9
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
++.+.++|||+|||.++++++|+++|++||.|.+|+|+.+ ++||||+|.+.++|+.|++.|++..|.|+.|+|.||
T Consensus 4 d~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a 83 (90)
T d2cqia1 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 83 (90)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 3455789999999999999999999999999999999864 689999999999999999999999999999999999
Q ss_pred cCCCCC
Q 029152 136 RNPANK 141 (198)
Q Consensus 136 ~~~~~~ 141 (198)
+++..+
T Consensus 84 ~~~~~~ 89 (90)
T d2cqia1 84 TTPSSQ 89 (90)
T ss_dssp CCTTCC
T ss_pred CCCCCC
Confidence 876543
No 4
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=1.1e-21 Score=133.40 Aligned_cols=79 Identities=28% Similarity=0.466 Sum_probs=73.0
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
...++|||+|||+++++++|+++|++||.|.+|+|+.+ +|||||+|.+.++|++||+.||+..|+|+.|+|+++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34678999999999999999999999999999999764 689999999999999999999999999999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
+++..
T Consensus 86 ~~~~~ 90 (99)
T d1whwa_ 86 TIKKE 90 (99)
T ss_dssp CCCST
T ss_pred CCCCc
Confidence 97643
No 5
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.9e-21 Score=130.78 Aligned_cols=82 Identities=35% Similarity=0.553 Sum_probs=75.2
Q ss_pred CCCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEE
Q 029152 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 133 (198)
Q Consensus 58 ~~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 133 (198)
.......++|||+|||+++++++|+++|++||.|.+|+++.+ ++||||+|.+.++|++|++.||+..|+|+.|+|+
T Consensus 5 ~~~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~ 84 (93)
T d2cq3a1 5 SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVN 84 (93)
T ss_dssp SCCSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 344556778999999999999999999999999999999875 6899999999999999999999999999999999
Q ss_pred eccCCC
Q 029152 134 WGRNPA 139 (198)
Q Consensus 134 ~a~~~~ 139 (198)
||+++.
T Consensus 85 ~A~~r~ 90 (93)
T d2cq3a1 85 NATARV 90 (93)
T ss_dssp ECCSSC
T ss_pred ecCcCC
Confidence 998754
No 6
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.87 E-value=4.5e-22 Score=130.75 Aligned_cols=74 Identities=28% Similarity=0.514 Sum_probs=70.1
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
+++|||+|||.++++++|+++|++||.|.+++|+++ ++||||+|.+.++|++|++.||+..++|+.|+|+||+|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 578999999999999999999999999999998753 68999999999999999999999999999999999986
No 7
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=6.7e-22 Score=132.24 Aligned_cols=79 Identities=25% Similarity=0.508 Sum_probs=73.1
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
..+.++|||+|||.++++++|+++|++||.|.+|+|+.+ +|||||+|.+.++|++|++.|++..|+|+.|+|+|
T Consensus 5 ~~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ 84 (90)
T d2cq0a1 5 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEW 84 (90)
T ss_dssp CSSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 345678999999999999999999999999999999864 57999999999999999999999999999999999
Q ss_pred ccCCC
Q 029152 135 GRNPA 139 (198)
Q Consensus 135 a~~~~ 139 (198)
|+++.
T Consensus 85 akp~~ 89 (90)
T d2cq0a1 85 AKPST 89 (90)
T ss_dssp SSCCC
T ss_pred eeCCC
Confidence 99764
No 8
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.5e-22 Score=132.39 Aligned_cols=79 Identities=27% Similarity=0.575 Sum_probs=73.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
.+.++|||+|||+++++++|+++|++||+|.+|+|+.+ +|||||+|.+.++|++|++.||+..|+|+.|+|+||
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 35679999999999999999999999999999999763 699999999999999999999999999999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
+++..
T Consensus 83 ~p~~~ 87 (89)
T d2cqba1 83 KPMRI 87 (89)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 87643
No 9
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=7.9e-22 Score=129.54 Aligned_cols=74 Identities=34% Similarity=0.606 Sum_probs=69.8
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
.++|||+|||.+++|++|+++|++||.|.+|+++++ +|||||+|.++++|++|++.||+..|+|+.|+|+||+|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 467999999999999999999999999999999763 58999999999999999999999999999999999986
No 10
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=7.9e-22 Score=130.80 Aligned_cols=77 Identities=31% Similarity=0.592 Sum_probs=73.3
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
..++|||+|||.++++++|+++|++||.|.+|++.++++||||+|.+.++|++|++.||+..|+|+.|+|+||.+..
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999998653
No 11
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.3e-21 Score=129.65 Aligned_cols=82 Identities=24% Similarity=0.382 Sum_probs=75.4
Q ss_pred CCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCC
Q 029152 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 138 (198)
Q Consensus 59 ~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~ 138 (198)
+.....++|||+|||+++++++|+++|++||.|..+++.++++||||+|.+.++|..|+..||+..|+|+.|+|+||+|+
T Consensus 3 d~~~~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~ 82 (86)
T d2cpda1 3 DTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPV 82 (86)
T ss_dssp SCSSCCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCC
T ss_pred ccccCCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCC
Confidence 33445689999999999999999999999999999999889999999999999999999999999999999999999976
Q ss_pred CC
Q 029152 139 AN 140 (198)
Q Consensus 139 ~~ 140 (198)
..
T Consensus 83 ~~ 84 (86)
T d2cpda1 83 DK 84 (86)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 12
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.5e-21 Score=131.35 Aligned_cols=79 Identities=28% Similarity=0.509 Sum_probs=72.8
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
...+++|||+|||+++++++|+++|++||+|.+|.|+++ +|||||+|.+.++|+.|++.||+..|+|+.|+|+|
T Consensus 4 ~~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~ 83 (93)
T d1h2vz_ 4 LKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 83 (93)
T ss_dssp TTTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEE
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 346789999999999999999999999999999999764 57999999999999999999999999999999999
Q ss_pred ccCCC
Q 029152 135 GRNPA 139 (198)
Q Consensus 135 a~~~~ 139 (198)
+....
T Consensus 84 a~~~~ 88 (93)
T d1h2vz_ 84 DAGFK 88 (93)
T ss_dssp ESCCC
T ss_pred cCCCC
Confidence 97543
No 13
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.3e-21 Score=133.73 Aligned_cols=79 Identities=28% Similarity=0.513 Sum_probs=72.9
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
++.++|||+|||+++++++|+++|++||.|.+++++.+ ||||||+|.+.++|+.||+.||+..|+|+.|+|+||
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 34678999999999999999999999999999988753 589999999999999999999999999999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
+++.+
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 98754
No 14
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.86 E-value=9.4e-22 Score=130.98 Aligned_cols=79 Identities=23% Similarity=0.496 Sum_probs=72.5
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEE
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 133 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 133 (198)
...+.++|||+|||.++++++|+++|++||.|.+|+|+++ +|||||+|.+.++|++|++.||+..|+|+.|+|+
T Consensus 3 ~s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~ 82 (88)
T d1rk8a_ 3 RSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVD 82 (88)
T ss_dssp CCC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3456789999999999999999999999999999999764 5899999999999999999999999999999999
Q ss_pred eccCC
Q 029152 134 WGRNP 138 (198)
Q Consensus 134 ~a~~~ 138 (198)
||.++
T Consensus 83 ~a~~k 87 (88)
T d1rk8a_ 83 WCFVK 87 (88)
T ss_dssp ESEEC
T ss_pred EecCC
Confidence 99864
No 15
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=9.8e-22 Score=132.23 Aligned_cols=78 Identities=27% Similarity=0.512 Sum_probs=72.4
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
...++|||+|||.++++++|+++|++||.|.+++|+++ +|||||+|.+.++|++|++.||+..|+|+.|+|+||
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 34579999999999999999999999999999999763 689999999999999999999999999999999999
Q ss_pred cCCC
Q 029152 136 RNPA 139 (198)
Q Consensus 136 ~~~~ 139 (198)
+++.
T Consensus 87 ~~~~ 90 (93)
T d1x5ua1 87 SAHN 90 (93)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 8754
No 16
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=3.7e-21 Score=129.82 Aligned_cols=78 Identities=26% Similarity=0.535 Sum_probs=72.2
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC---CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~---~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
..+.++|||+|||+++++++|+++|++||.|..+.+.. .++||||+|.+.++|+.||+.||++.|+|+.|+|+||++
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 44567899999999999999999999999999999865 379999999999999999999999999999999999986
Q ss_pred C
Q 029152 138 P 138 (198)
Q Consensus 138 ~ 138 (198)
.
T Consensus 91 ~ 91 (95)
T d1x4aa1 91 G 91 (95)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.85 E-value=3.7e-21 Score=138.56 Aligned_cols=81 Identities=30% Similarity=0.492 Sum_probs=73.3
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
....++|||+|||+++++++|+++|++||.|.+|+|+++ ||||||+|.+.++|++||+.||+..|+|+.|+|+|
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 334578999999999999999999999999999999753 68999999999999999999999999999999999
Q ss_pred ccCCCCC
Q 029152 135 GRNPANK 141 (198)
Q Consensus 135 a~~~~~~ 141 (198)
|++...+
T Consensus 119 a~~~~~~ 125 (139)
T d1u6fa1 119 AASGHQR 125 (139)
T ss_dssp SSCCCCC
T ss_pred cCCCCCC
Confidence 9875443
No 18
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.6e-21 Score=127.29 Aligned_cols=75 Identities=29% Similarity=0.558 Sum_probs=71.0
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCC
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 138 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~ 138 (198)
...++|||+||+ +||++|+++|++||.|.++++.++++||||+|.+.++|.+|++.||+..++|+.|+|+||+++
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 77 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSS
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCC
Confidence 346799999985 899999999999999999999999999999999999999999999999999999999999864
No 19
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4.1e-22 Score=130.46 Aligned_cols=76 Identities=22% Similarity=0.421 Sum_probs=71.3
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCc-eeCCeEeEEEeccCCCC
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT-VIGKQSVRLSWGRNPAN 140 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~-~~~g~~l~v~~a~~~~~ 140 (198)
.+|||+|||+++++++|+++|++||.|.+++++++|+||||+|.+.++|++|++.||+. .++|+.|+|+||.++..
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~ 78 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKL 78 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCc
Confidence 47999999999999999999999999999888889999999999999999999999985 69999999999998654
No 20
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.9e-21 Score=129.77 Aligned_cols=77 Identities=32% Similarity=0.579 Sum_probs=72.0
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
..+|||+|||+++++++|+++|++||.|.+++|+.+ +|||||+|.+.++|++|++.||+..|+|+.|+|++|+++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 457999999999999999999999999999999874 6999999999999999999999999999999999998764
Q ss_pred C
Q 029152 140 N 140 (198)
Q Consensus 140 ~ 140 (198)
+
T Consensus 88 ~ 88 (89)
T d1cvja2 88 E 88 (89)
T ss_dssp T
T ss_pred C
Confidence 3
No 21
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=3.4e-21 Score=129.75 Aligned_cols=79 Identities=25% Similarity=0.589 Sum_probs=72.6
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC-------CcEEEEEeCCHHHHHHHHHHh-CCceeCCeEeEE
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-------KGCGFVQFANRENAEEALHKL-NGTVIGKQSVRL 132 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~-------kg~afV~f~~~~~a~~a~~~l-~~~~~~g~~l~v 132 (198)
..+.++|||+|||+++++++|+++|++||.|.+|+|+++ +|||||+|.+.++|++|++.| |+..|+|+.|+|
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V 84 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVL 84 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEE
Confidence 345678999999999999999999999999999999653 689999999999999999998 899999999999
Q ss_pred EeccCCC
Q 029152 133 SWGRNPA 139 (198)
Q Consensus 133 ~~a~~~~ 139 (198)
+||++..
T Consensus 85 ~~A~~~~ 91 (94)
T d2cpha1 85 EWADSEV 91 (94)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 9998754
No 22
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1.3e-21 Score=135.55 Aligned_cols=78 Identities=22% Similarity=0.387 Sum_probs=73.5
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
...++|||+|||+.+++++|+++|++||+|.+|.|.++++||||+|.+.++|++|++.||+..|.|+.|.|+|+....
T Consensus 8 r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~ 85 (111)
T d1whxa_ 8 RSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGV 85 (111)
T ss_dssp EEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTT
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeeccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCc
Confidence 346799999999999999999999999999999999999999999999999999999999999999999999997543
No 23
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=4.5e-21 Score=130.12 Aligned_cols=80 Identities=25% Similarity=0.404 Sum_probs=73.2
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
...+..+|||+|||+++++++|+++|++||+|++++|.+ ++||||+|.+.++|++||+.||+..|+|+.|+|.+++.+.
T Consensus 11 ~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~ 89 (98)
T d1wg4a_ 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP 89 (98)
T ss_dssp CCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEEC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCC
Confidence 344677899999999999999999999999999999875 5999999999999999999999999999999999998654
Q ss_pred C
Q 029152 140 N 140 (198)
Q Consensus 140 ~ 140 (198)
.
T Consensus 90 ~ 90 (98)
T d1wg4a_ 90 E 90 (98)
T ss_dssp C
T ss_pred C
Confidence 3
No 24
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.7e-21 Score=129.22 Aligned_cols=79 Identities=32% Similarity=0.644 Sum_probs=73.0
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
.+.++|||+|||+++++++|+++|++||.|..+.++. ++|||||+|.++++|+.|++.|++..|+|+.|+|+||
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 4578899999999999999999999999999998876 3699999999999999999999999999999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
.++..
T Consensus 83 ~~~~~ 87 (90)
T d1x5sa1 83 GKSSD 87 (90)
T ss_dssp ECCCC
T ss_pred CCCCC
Confidence 87644
No 25
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1e-20 Score=128.17 Aligned_cols=78 Identities=24% Similarity=0.554 Sum_probs=72.8
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCC--eEeEEEeccCC
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK--QSVRLSWGRNP 138 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g--~~l~v~~a~~~ 138 (198)
..+.++|||+|||+++++++|+++|++||+|..+++.++++||||+|.+.++|+.|++.||+..|++ ++|+|+||++.
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~ 93 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSG 93 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCC
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeeccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCC
Confidence 3457899999999999999999999999999999999999999999999999999999999999976 58999999864
No 26
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=6.1e-21 Score=126.99 Aligned_cols=76 Identities=16% Similarity=0.261 Sum_probs=69.2
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
..++|||+|||+++++++|+++|++|| +..+.+.+.++||||+|.+.++|++|++.||+..|+|+.|+|+|+++..
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEEEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcC-ceeeeeeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 357899999999999999999999999 4556677789999999999999999999999999999999999997653
No 27
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.84 E-value=8.5e-21 Score=124.90 Aligned_cols=77 Identities=18% Similarity=0.372 Sum_probs=70.8
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC-CcEEEEEeCCHHHHHHHHHHhCCcee-CCeEeEEEecc
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-KGCGFVQFANRENAEEALHKLNGTVI-GKQSVRLSWGR 136 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~-kg~afV~f~~~~~a~~a~~~l~~~~~-~g~~l~v~~a~ 136 (198)
..+++++|||+|||.++++++|+++|++||.|.+|+++++ ++||||+|.+.++|+.|++.|++..| +++.|+|+||+
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 3445789999999999999999999999999999999875 58999999999999999999999988 47899999997
No 28
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.1e-20 Score=129.31 Aligned_cols=80 Identities=34% Similarity=0.529 Sum_probs=71.7
Q ss_pred CCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEE
Q 029152 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132 (198)
Q Consensus 59 ~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v 132 (198)
..+.+.++|||+|||++++|++|+++|++||+|.+|+|+.+ +|||||+|.+.++|++||+.+++ .|+|+.|+|
T Consensus 5 ~~d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V 83 (103)
T d2cqda1 5 QKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANV 83 (103)
T ss_dssp CCSCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEE
T ss_pred CCCCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEE
Confidence 44455688999999999999999999999999999999763 69999999999999999998875 799999999
Q ss_pred EeccCCC
Q 029152 133 SWGRNPA 139 (198)
Q Consensus 133 ~~a~~~~ 139 (198)
++|....
T Consensus 84 ~~a~~~~ 90 (103)
T d2cqda1 84 NLAYLGA 90 (103)
T ss_dssp EESTTTC
T ss_pred EEcCCCC
Confidence 9998643
No 29
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.2e-21 Score=127.54 Aligned_cols=75 Identities=20% Similarity=0.504 Sum_probs=70.7
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCC
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 138 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~ 138 (198)
.+|||+|||++++|++|+++|++||+|.+++|+++ ++||||+|.++++|+.|++.||+..|+|+.|+|+||.+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 57999999999999999999999999999999864 699999999999999999999999999999999999864
Q ss_pred C
Q 029152 139 A 139 (198)
Q Consensus 139 ~ 139 (198)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 3
No 30
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.5e-21 Score=128.14 Aligned_cols=78 Identities=32% Similarity=0.488 Sum_probs=70.4
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC-CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCCC
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~-~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~~ 140 (198)
...++|||+|||++++|++|+++|++||.|.+|++.. +++||||+|.+.++|++|+. +++.|+|+.|+|++|+++..
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 3478999999999999999999999999999998876 47999999999999999985 78899999999999987654
Q ss_pred C
Q 029152 141 K 141 (198)
Q Consensus 141 ~ 141 (198)
.
T Consensus 81 ~ 81 (88)
T d1wf0a_ 81 S 81 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 31
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=5.5e-21 Score=125.19 Aligned_cols=74 Identities=16% Similarity=0.280 Sum_probs=68.7
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
+++|||+|||+++++++|+++|++||.|..+.++. ++|||||+|.+.++|++|++.||+..++|+.|+|++++|
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 47999999999999999999999999998877754 379999999999999999999999999999999999986
No 32
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=8.6e-21 Score=123.43 Aligned_cols=72 Identities=21% Similarity=0.445 Sum_probs=68.4
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC-----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~-----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
+|||+|||+++++++|+++|++||.|.+++|..+ +|||||+|.+.++|++|++.||+..++|+.|+|++|.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 6999999999999999999999999999999864 68999999999999999999999999999999999863
No 33
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=4.5e-20 Score=126.43 Aligned_cols=83 Identities=22% Similarity=0.266 Sum_probs=74.8
Q ss_pred CCCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHh--CCceeCCeEeEEEec
Q 029152 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL--NGTVIGKQSVRLSWG 135 (198)
Q Consensus 58 ~~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l--~~~~~~g~~l~v~~a 135 (198)
.....++++|||+|||..++|++|+++|++||.|.++.+.++|++|||+|++.++|+.|++.| +...++|+.|+|.|+
T Consensus 9 ~~~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s 88 (104)
T d1wexa_ 9 HHKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYS 88 (104)
T ss_dssp CCCCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEEC
T ss_pred CCcCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEc
Confidence 344456889999999999999999999999999999999999999999999999999999977 566789999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
+.+..
T Consensus 89 ~~~~~ 93 (104)
T d1wexa_ 89 TSKRI 93 (104)
T ss_dssp SSSSC
T ss_pred CCCcc
Confidence 86543
No 34
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=6.6e-21 Score=125.94 Aligned_cols=72 Identities=29% Similarity=0.535 Sum_probs=67.6
Q ss_pred EEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC---------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG---------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 67 lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~---------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
|||+|||+++++++|+++|++||.|.+++|+++ ||||||+|.+.++|++|++.||+..|+|+.|+|+||+.
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 799999999999999999999999999998752 68999999999999999999999999999999999965
Q ss_pred C
Q 029152 138 P 138 (198)
Q Consensus 138 ~ 138 (198)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 3
No 35
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7.1e-21 Score=124.40 Aligned_cols=71 Identities=35% Similarity=0.631 Sum_probs=68.0
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
+|||+|||++++|++|+++|++||+|.+|+|+++ +|||||+|.++++|+.|++.|++..++|+.|+|.||+
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 6999999999999999999999999999999864 5899999999999999999999999999999999996
No 36
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=3.3e-20 Score=127.05 Aligned_cols=78 Identities=29% Similarity=0.535 Sum_probs=68.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC-------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~-------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
.+.++|||+|||++++|++|+++|++|| |.++.++. .+|||||+|.+.++|++|++ ||+..|+|+.|+|++
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 3568999999999999999999999999 77777654 25899999999999987775 999999999999999
Q ss_pred ccCCCCC
Q 029152 135 GRNPANK 141 (198)
Q Consensus 135 a~~~~~~ 141 (198)
|.++..+
T Consensus 91 a~~~~~~ 97 (104)
T d1wi8a_ 91 ADQAQDK 97 (104)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 9876543
No 37
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.2e-21 Score=128.93 Aligned_cols=74 Identities=23% Similarity=0.397 Sum_probs=68.8
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
.+|||+|||+++++++|+++|++||.|.++++.++ |||||+|.+.++|++||+.||+..|+|+.|+|.+++.+.
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccccc-ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 36999999999999999999999999999998764 899999999999999999999999999999999887544
No 38
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.6e-20 Score=128.40 Aligned_cols=76 Identities=24% Similarity=0.439 Sum_probs=70.5
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
.++|||+|||+++++++|+++|++||.|.++.|+++ +|||||+|.+.++|++|++ ++++.|+|+.|.|++|++
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 479999999999999999999999999999999763 6999999999999999996 799999999999999987
Q ss_pred CCC
Q 029152 138 PAN 140 (198)
Q Consensus 138 ~~~ 140 (198)
+.+
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 39
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.83 E-value=1.3e-20 Score=124.48 Aligned_cols=74 Identities=30% Similarity=0.543 Sum_probs=68.4
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCC--eEeEEE
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGK--QSVRLS 133 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g--~~l~v~ 133 (198)
...++|||+|||++++|++|+++|++||.|.+++|+++ +|||||+|.+.++|++|++.||+..+.| ++|+|+
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 45678999999999999999999999999999999864 5899999999999999999999999976 789999
Q ss_pred ec
Q 029152 134 WG 135 (198)
Q Consensus 134 ~a 135 (198)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 97
No 40
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.8e-20 Score=129.43 Aligned_cols=75 Identities=19% Similarity=0.396 Sum_probs=70.8
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC---CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~---kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
.+++|||+|||..+++++|+++|++||.|.+|++..+ +|||||+|.+.++|..|++.||+..|+|+.|+|.++..
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 4679999999999999999999999999999999864 79999999999999999999999999999999999864
No 41
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=6.2e-20 Score=122.00 Aligned_cols=80 Identities=14% Similarity=0.267 Sum_probs=73.9
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHh--CCceeCCeEeEEEeccC
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL--NGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l--~~~~~~g~~l~v~~a~~ 137 (198)
+..++++|||+|||..+++++|+++|++||.|.++++.++++||||+|.+.++|++|++.+ ++..++|+.|+|.|++.
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~ 83 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 83 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSC
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCC
Confidence 4557889999999999999999999999999999999999999999999999999999865 67789999999999986
Q ss_pred CC
Q 029152 138 PA 139 (198)
Q Consensus 138 ~~ 139 (198)
+.
T Consensus 84 ~~ 85 (88)
T d2cq1a1 84 KE 85 (88)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 42
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.3e-20 Score=124.50 Aligned_cols=73 Identities=36% Similarity=0.682 Sum_probs=67.3
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCC--eEeEEEe
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGK--QSVRLSW 134 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g--~~l~v~~ 134 (198)
.+++|||+|||+++++++|+++|++||+|.+++|+++ ++||||+|.+.++|++|++.||+..+.| ++|+|+|
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 3578999999999999999999999999999999763 5899999999999999999999999987 4699998
Q ss_pred c
Q 029152 135 G 135 (198)
Q Consensus 135 a 135 (198)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 7
No 43
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.82 E-value=1.4e-20 Score=127.18 Aligned_cols=83 Identities=25% Similarity=0.395 Sum_probs=73.6
Q ss_pred CCCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEe-CCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 58 ~~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~-~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
.....+.++|||+|||.++++++|+++|++||.|..+... .+++||||+|.+.++|++|++.||+..|+|+.|+|+|+.
T Consensus 10 ~~~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~ 89 (96)
T d1fjca_ 10 SKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTG 89 (96)
T ss_dssp TSTTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECS
T ss_pred cCcCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 3444557899999999999999999999999998877653 357999999999999999999999999999999999999
Q ss_pred CCCC
Q 029152 137 NPAN 140 (198)
Q Consensus 137 ~~~~ 140 (198)
++..
T Consensus 90 ~k~~ 93 (96)
T d1fjca_ 90 EKGG 93 (96)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 8654
No 44
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.5e-20 Score=123.16 Aligned_cols=77 Identities=25% Similarity=0.429 Sum_probs=69.3
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
...++|||+|||+++|+++|+++|++||.|.+|+|+.+ ||||||+|.+.++|++||+. .+.|+|+.|.|++|
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeC
Confidence 35678999999999999999999999999999999864 58999999999999999984 45899999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
.++..
T Consensus 84 ~~k~~ 88 (90)
T d2cqga1 84 NSKQS 88 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87643
No 45
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.3e-20 Score=122.73 Aligned_cols=70 Identities=39% Similarity=0.586 Sum_probs=65.8
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEE
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v 132 (198)
+.++|||+|||+.+++++|+++|++||.|.+|+|+.+ ++||||+|.+.++|++|++.||+..|+|+.|+|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4678999999999999999999999999999998764 589999999999999999999999999999987
No 46
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.2e-20 Score=127.21 Aligned_cols=82 Identities=28% Similarity=0.428 Sum_probs=71.2
Q ss_pred CCCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEE--------EEeC------CCcEEEEEeCCHHHHHHHHHHhCCc
Q 029152 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV--------KIPV------GKGCGFVQFANRENAEEALHKLNGT 123 (198)
Q Consensus 58 ~~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v--------~i~~------~kg~afV~f~~~~~a~~a~~~l~~~ 123 (198)
++.+...++|||+|||.++++++|+++|++||.|..+ .+.. .++||||+|.++++|++|++.||+.
T Consensus 2 p~~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~ 81 (101)
T d2cpea1 2 PDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGK 81 (101)
T ss_dssp CCCCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTC
T ss_pred CCCCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCC
Confidence 4456678899999999999999999999999988543 3222 2589999999999999999999999
Q ss_pred eeCCeEeEEEeccCCC
Q 029152 124 VIGKQSVRLSWGRNPA 139 (198)
Q Consensus 124 ~~~g~~l~v~~a~~~~ 139 (198)
.|+|+.|+|+||+++.
T Consensus 82 ~~~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 82 DFQGSKLKVSLARKKP 97 (101)
T ss_dssp EETTEECEEECSSCCC
T ss_pred EECCEEEEEEEcCCCC
Confidence 9999999999998754
No 47
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=4.2e-20 Score=125.09 Aligned_cols=80 Identities=23% Similarity=0.481 Sum_probs=71.5
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhC------CceeCC
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLN------GTVIGK 127 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~------~~~~~g 127 (198)
+..+.++|||+|||++++|++|+++|++||.|.++.++.+ +|||||+|.+.++|++|++.|+ +..++|
T Consensus 4 ~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 4 DVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 3445789999999999999999999999999999988663 6999999999999999999886 677899
Q ss_pred eEeEEEeccCCC
Q 029152 128 QSVRLSWGRNPA 139 (198)
Q Consensus 128 ~~l~v~~a~~~~ 139 (198)
+.|+|+||+++.
T Consensus 84 r~l~v~~a~~k~ 95 (98)
T d1x4ha1 84 RQLKVDLAVTRD 95 (98)
T ss_dssp CEEEEECCCCCC
T ss_pred EEEEEEECCCCC
Confidence 999999998754
No 48
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.8e-20 Score=123.26 Aligned_cols=75 Identities=31% Similarity=0.607 Sum_probs=67.9
Q ss_pred EEEcCCCCCCCHHHHHHHhccCCceEEE-EEeC------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 67 IFVGGLDPNVTDEDLRQPFSQYGEIASV-KIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 67 lfV~~l~~~~~e~~l~~~F~~~G~i~~v-~i~~------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
|||+|||++++|++|+++|++||.|.++ ++++ ++|||||+|.+.++|++|++.|++..++|+.|+|+||.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998764 6654 36999999999999999999999999999999999998765
Q ss_pred CC
Q 029152 140 NK 141 (198)
Q Consensus 140 ~~ 141 (198)
.+
T Consensus 81 ~k 82 (83)
T d1x5ta1 81 SK 82 (83)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 49
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=5.8e-20 Score=118.55 Aligned_cols=71 Identities=23% Similarity=0.404 Sum_probs=67.7
Q ss_pred EEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCC
Q 029152 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 138 (198)
Q Consensus 67 lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~ 138 (198)
|||+|||+++++++|+++|++|| +..+++.++++||||+|.+.++|++|++.||+..++|+.|+|+|++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFVDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceeecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 778888999999999999999999999999999999999999999754
No 50
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.1e-20 Score=128.18 Aligned_cols=76 Identities=30% Similarity=0.525 Sum_probs=70.3
Q ss_pred CCeEEEcCCCC-CCCHHHHHHHhccCCceEEEEEeCC-CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccCCC
Q 029152 64 NTTIFVGGLDP-NVTDEDLRQPFSQYGEIASVKIPVG-KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139 (198)
Q Consensus 64 ~~~lfV~~l~~-~~~e~~l~~~F~~~G~i~~v~i~~~-kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~~~ 139 (198)
+++|||+||++ .+++++|+++|++||.|.+|+|+++ +|||||+|++.++|++|++.|++..|.|+.|+|+|++...
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 57899999965 5999999999999999999999886 5899999999999999999999999999999999997543
No 51
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.1e-20 Score=121.86 Aligned_cols=73 Identities=27% Similarity=0.490 Sum_probs=67.8
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
..++|||+|||+++++++|+++|++||.|.+++|+.+ +|||||+|.+.++|++|++ ++++.|+|+.|+|+.|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 3579999999999999999999999999999999764 6999999999999999997 69999999999999885
No 52
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=5.3e-21 Score=131.13 Aligned_cols=79 Identities=29% Similarity=0.538 Sum_probs=72.3
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
.+.++|||+|||+++++++|+++|++||+|.+|+|+.+ +|||||+|.+.++|++|++.||+..|+|+.|+|+||
T Consensus 6 ~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a 85 (104)
T d1p1ta_ 6 RSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNA 85 (104)
T ss_dssp HHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEET
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34578999999999999999999999999999998763 589999999999999999999999999999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
.++..
T Consensus 86 ~~~~~ 90 (104)
T d1p1ta_ 86 ASEKN 90 (104)
T ss_dssp TCTTH
T ss_pred CCCCC
Confidence 87543
No 53
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=6.6e-21 Score=129.98 Aligned_cols=75 Identities=23% Similarity=0.360 Sum_probs=69.6
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
+.++|||+|||+++++++|+++|+.||+|.+|+|+++ ||||||+|.+.++|++|++ ||+..|+|+.|+|++++
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 4578999999999999999999999999999999873 6899999999999999996 99999999999999987
Q ss_pred CC
Q 029152 137 NP 138 (198)
Q Consensus 137 ~~ 138 (198)
++
T Consensus 96 ~~ 97 (101)
T d2cq4a1 96 AE 97 (101)
T ss_dssp HH
T ss_pred CC
Confidence 53
No 54
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.7e-20 Score=122.15 Aligned_cols=77 Identities=22% Similarity=0.391 Sum_probs=70.0
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC--CCcEEEEEeCCHHHHHHHHHHhCCcee-CCeEeEEEeccCC
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV--GKGCGFVQFANRENAEEALHKLNGTVI-GKQSVRLSWGRNP 138 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~--~kg~afV~f~~~~~a~~a~~~l~~~~~-~g~~l~v~~a~~~ 138 (198)
+++++|||+|||+++++++|+++|++||.|.++.+.. +++||||+|++.++|.+|+..|++..| +|+.|+|+|+++.
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 3478999999999999999999999999998887664 579999999999999999999999988 5899999999864
No 55
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.81 E-value=5.2e-20 Score=121.88 Aligned_cols=75 Identities=27% Similarity=0.620 Sum_probs=67.9
Q ss_pred CCCeEEEcCCCCCCC-HHHHHHHhccCCceEEEEEeC-------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 63 SNTTIFVGGLDPNVT-DEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~-e~~l~~~F~~~G~i~~v~i~~-------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
..++|||+|||++++ |++|+++|++||.|.+|+|.. ++|||||+|.+.++|++|++ ||+..|+|+.|+|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 468999999999865 677999999999999999865 36899999999999999996 999999999999999
Q ss_pred ccCC
Q 029152 135 GRNP 138 (198)
Q Consensus 135 a~~~ 138 (198)
|+++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9864
No 56
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=1e-20 Score=122.71 Aligned_cols=70 Identities=26% Similarity=0.519 Sum_probs=66.1
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
++|||+|||++++|++|+++|++||.|.+++|+++ ||||||+|.+.++|++|++ ++++.|+|+.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 68999999999999999999999999999999773 6999999999999999997 7999999999999987
No 57
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=7.7e-20 Score=124.16 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=72.2
Q ss_pred CCCCCCeEEEcCCCCC-CCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHH--HhCCceeCCeEeEEEecc
Q 029152 60 GDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH--KLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~-~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~--~l~~~~~~g~~l~v~~a~ 136 (198)
....+++|||+|||.+ +|+++|+++|++||.|.++.+++++++|||+|.+.++|.+|++ .+++..++|+.|+|.||+
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 3455789999999985 8999999999999999999999999999999999999999997 568889999999999997
Q ss_pred CC
Q 029152 137 NP 138 (198)
Q Consensus 137 ~~ 138 (198)
..
T Consensus 94 ~~ 95 (99)
T d1x4fa1 94 KY 95 (99)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 58
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=6.7e-20 Score=122.58 Aligned_cols=78 Identities=23% Similarity=0.535 Sum_probs=70.7
Q ss_pred CCCeEEEcCCCCCCCHHHHHH----HhccCCceEEEEEeC---CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQ----PFSQYGEIASVKIPV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~----~F~~~G~i~~v~i~~---~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
++++|||+|||+++++++|++ +|++||+|.+|++.+ .++||||+|.+.++|.+|++.||+..++|+.|+|+||
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~a 81 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYA 81 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 468999999999999998864 589999999999865 3799999999999999999999999999999999999
Q ss_pred cCCCC
Q 029152 136 RNPAN 140 (198)
Q Consensus 136 ~~~~~ 140 (198)
+++.+
T Consensus 82 k~~~~ 86 (91)
T d1nu4a_ 82 KTDSD 86 (91)
T ss_dssp SSCCT
T ss_pred CCCch
Confidence 87653
No 59
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.2e-19 Score=118.15 Aligned_cols=71 Identities=24% Similarity=0.511 Sum_probs=66.3
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
.++|||+|||+++|+++|+++|++||.|..+.++.+ +|||||+|.+.++|++|++ +++..|+|+.|+|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 579999999999999999999999999999998763 5999999999999999996 8999999999999876
No 60
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.80 E-value=1.5e-20 Score=125.78 Aligned_cols=78 Identities=22% Similarity=0.415 Sum_probs=69.5
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEe-----CCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~-----~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
......+|||+|||+++++++|+++|++||.|..++|+ +++|||||+|.+.++|++||+ ||+..|+|+.|+|++
T Consensus 9 ~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 9 ESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEK 87 (91)
T ss_dssp SCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEEC
T ss_pred CCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEe
Confidence 34456799999999999999999999999988777664 358999999999999999996 999999999999999
Q ss_pred ccCC
Q 029152 135 GRNP 138 (198)
Q Consensus 135 a~~~ 138 (198)
|+.+
T Consensus 88 ak~k 91 (91)
T d1fjeb1 88 PKGR 91 (91)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 9863
No 61
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=6.3e-20 Score=118.36 Aligned_cols=69 Identities=25% Similarity=0.563 Sum_probs=64.3
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
+|||+|||++++|++|+++|++||+|.+++|+.+ +|||||+|.+.++|++||+ +++..|+|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 5999999999999999999999999999999873 6999999999999999997 7999999999999754
No 62
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=9.2e-20 Score=124.21 Aligned_cols=78 Identities=18% Similarity=0.395 Sum_probs=70.7
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC-----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 60 ~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~-----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
.+.+.++|||+|||.++++++|+++|++||.|..+.+..+ +|||||+|.+.++|++|++.|||..|.|+.|.|.+
T Consensus 14 ~~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~ 93 (101)
T d1x5oa1 14 QEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAP 93 (101)
T ss_dssp CCCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCC
T ss_pred ccCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCC
Confidence 3445689999999999999999999999999999988753 58999999999999999999999999999998888
Q ss_pred ccC
Q 029152 135 GRN 137 (198)
Q Consensus 135 a~~ 137 (198)
++|
T Consensus 94 ~~P 96 (101)
T d1x5oa1 94 TEP 96 (101)
T ss_dssp SSC
T ss_pred CCC
Confidence 765
No 63
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.8e-19 Score=122.97 Aligned_cols=81 Identities=23% Similarity=0.315 Sum_probs=69.7
Q ss_pred CCCCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC-----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeE
Q 029152 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLNGTVIGKQSVR 131 (198)
Q Consensus 57 ~~~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~-----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~ 131 (198)
.........+|||+|||+++||++|+++|..||. ..|.++.+ +|||||+|.+.++|++|++ +|+..|+|+.|+
T Consensus 8 ~~~~~~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~ 85 (102)
T d1weza_ 8 SSFQSTTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVE 85 (102)
T ss_dssp SSCCCSSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCE
T ss_pred CCCcCCCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEE
Confidence 3445566789999999999999999999999984 45666553 6899999999999999987 899999999999
Q ss_pred EEeccCCC
Q 029152 132 LSWGRNPA 139 (198)
Q Consensus 132 v~~a~~~~ 139 (198)
|.|+....
T Consensus 86 V~~s~~~~ 93 (102)
T d1weza_ 86 LFLNSTAG 93 (102)
T ss_dssp EEEECCCC
T ss_pred EEEcCCCC
Confidence 99998654
No 64
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.6e-20 Score=118.98 Aligned_cols=69 Identities=28% Similarity=0.637 Sum_probs=64.2
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
+|||+|||+++|+++|+++|++||.|.+|+|+.+ ||||||+|.+.++|++||+ .+++.|+|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 6999999999999999999999999999999874 6999999999999999997 5778999999999875
No 65
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1e-19 Score=117.25 Aligned_cols=69 Identities=30% Similarity=0.527 Sum_probs=64.9
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
+|||+|||++++|++|+++|++||.|..+.++.+ ++||||+|.+.++|++|++ +|++.|+|+.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 5999999999999999999999999999988663 6999999999999999997 9999999999999986
No 66
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.5e-20 Score=125.91 Aligned_cols=78 Identities=29% Similarity=0.513 Sum_probs=71.4
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
++++|||+|||.++++++|+++|++||.|..+.++. .++||||+|.+.++|+.|++.||+..|.|+.|+|+||+
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 468999999999999999999999999988776653 47999999999999999999999999999999999999
Q ss_pred CCCC
Q 029152 137 NPAN 140 (198)
Q Consensus 137 ~~~~ 140 (198)
++.+
T Consensus 97 ~k~~ 100 (102)
T d2cpxa1 97 NKKQ 100 (102)
T ss_dssp CCSC
T ss_pred Cccc
Confidence 8654
No 67
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=3.1e-19 Score=122.16 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=71.6
Q ss_pred CCCCeEEEcCCCCCC-CH----HHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 62 SSNTTIFVGGLDPNV-TD----EDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~-~e----~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
...++|||+||+..+ ++ ++|+++|++||.|.++++++++++|||+|.+.++|++|++.||+..|+|+.|+|.||+
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~ 82 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQ 82 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecc
Confidence 346789999999875 43 5699999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC
Q 029152 137 NPAN 140 (198)
Q Consensus 137 ~~~~ 140 (198)
++..
T Consensus 83 ~~~~ 86 (104)
T d1weya_ 83 TLHI 86 (104)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 6543
No 68
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=6.8e-19 Score=117.11 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=71.6
Q ss_pred CCCCCeEEEcCCCCC-CCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHh--CCceeCCeEeEEEeccC
Q 029152 61 DSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL--NGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~-~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l--~~~~~~g~~l~v~~a~~ 137 (198)
...+++|||+|||.. +|+++|.++|++||.|.++.+++++++|||+|++.++|+.|++.| ++..++|++|+|+||++
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~ 84 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQK 84 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECC
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCC
Confidence 345788999999986 789999999999999999999999999999999999999999965 78889999999999985
Q ss_pred C
Q 029152 138 P 138 (198)
Q Consensus 138 ~ 138 (198)
.
T Consensus 85 ~ 85 (89)
T d1x4da1 85 Y 85 (89)
T ss_dssp C
T ss_pred c
Confidence 4
No 69
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.6e-18 Score=118.56 Aligned_cols=80 Identities=24% Similarity=0.282 Sum_probs=69.0
Q ss_pred CCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEE
Q 029152 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132 (198)
Q Consensus 59 ~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v 132 (198)
....+..+|||+|||++++|++|+++|..+|.|..+.++. .+|||||+|.++++|++|++ +|+..|+++.|+|
T Consensus 10 ~~~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V 88 (104)
T d1wg5a_ 10 PDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEI 88 (104)
T ss_dssp SSCSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEE
T ss_pred CCCCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEE
Confidence 3444566899999999999999999999999887754433 36999999999999999996 8999999999999
Q ss_pred EeccCCC
Q 029152 133 SWGRNPA 139 (198)
Q Consensus 133 ~~a~~~~ 139 (198)
.++.+..
T Consensus 89 ~~~~~~~ 95 (104)
T d1wg5a_ 89 FKSSRAE 95 (104)
T ss_dssp EEECTTT
T ss_pred EECCHHH
Confidence 9998653
No 70
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.1e-19 Score=123.01 Aligned_cols=79 Identities=24% Similarity=0.275 Sum_probs=71.0
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeC--CCcEEEEEeCCHHHHHHHHHHhCCcee--CCeEeEEEeccC
Q 029152 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV--GKGCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWGRN 137 (198)
Q Consensus 62 ~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~--~kg~afV~f~~~~~a~~a~~~l~~~~~--~g~~l~v~~a~~ 137 (198)
.+..+|||+|||+.+||++|+++|++||.|.+|.|.. ++++|||+|.++++|+.|++.||+..| .++.|+|.|+++
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~ 84 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKL 84 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSS
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCC
Confidence 4567899999999999999999999999999998875 468999999999999999999999998 578999999986
Q ss_pred CCC
Q 029152 138 PAN 140 (198)
Q Consensus 138 ~~~ 140 (198)
+..
T Consensus 85 ~~~ 87 (108)
T d2adba1 85 TSL 87 (108)
T ss_dssp CSC
T ss_pred ccc
Confidence 543
No 71
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.5e-19 Score=120.19 Aligned_cols=77 Identities=19% Similarity=0.405 Sum_probs=68.1
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCc-eEEEEEeC-------CCcEEEEEeCCHHHHHHHHHHhCC--ceeCCeEeEEE
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGE-IASVKIPV-------GKGCGFVQFANRENAEEALHKLNG--TVIGKQSVRLS 133 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~-i~~v~i~~-------~kg~afV~f~~~~~a~~a~~~l~~--~~~~g~~l~v~ 133 (198)
+++|||+|||.++++++|+++|++||+ |.++.|++ ++|||||+|.+.++|..|++.|++ ..++|+.|+|+
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 368999999999999999999999996 89999865 368999999999999999999864 45679999999
Q ss_pred eccCCCC
Q 029152 134 WGRNPAN 140 (198)
Q Consensus 134 ~a~~~~~ 140 (198)
||+++..
T Consensus 81 ~A~p~~~ 87 (96)
T d2disa1 81 WAEPEID 87 (96)
T ss_dssp ESCSSCS
T ss_pred EcCCCCC
Confidence 9987544
No 72
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=7.4e-19 Score=115.95 Aligned_cols=73 Identities=18% Similarity=0.379 Sum_probs=67.7
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC-----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~-----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
..++|||+|||.++++++|+++|+.||.|..|+|..+ ||||||+|.+.++|++||+ +++..+.|+.|.|.|++
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 3578999999999999999999999999999999763 5899999999999999996 79999999999999975
No 73
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=5.3e-19 Score=113.92 Aligned_cols=70 Identities=21% Similarity=0.301 Sum_probs=65.3
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
++|||+|||+++++++|+++|+.||.|..|++..+ ++||||+|.++++|++|+. +++..|+|+.|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 58999999999999999999999999999999774 4799999999999999996 8999999999999865
No 74
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=4.7e-19 Score=117.92 Aligned_cols=71 Identities=24% Similarity=0.480 Sum_probs=65.1
Q ss_pred CCCeEEEcCCCCCCCHHHH---HHHhccCCceEEEEEeCC---------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEe
Q 029152 63 SNTTIFVGGLDPNVTDEDL---RQPFSQYGEIASVKIPVG---------KGCGFVQFANRENAEEALHKLNGTVIGKQSV 130 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l---~~~F~~~G~i~~v~i~~~---------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l 130 (198)
..++|||+|||+++++++| +++|++||+|.+|.|+++ ++||||+|.+.++|++|++.||+..++|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3567999999999999999 678999999999999874 2899999999999999999999999999999
Q ss_pred EEE
Q 029152 131 RLS 133 (198)
Q Consensus 131 ~v~ 133 (198)
+|.
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 984
No 75
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=3.2e-18 Score=112.98 Aligned_cols=73 Identities=29% Similarity=0.389 Sum_probs=65.0
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEE-EEEeC-----CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS-VKIPV-----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~-v~i~~-----~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
..++|||+|||+++++++|+++|+.||.|.. +.+.. ++|+|||+|.+.++|++|++.||+..|+|+.|+|+++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 4568999999999999999999999998855 34433 3699999999999999999999999999999999985
No 76
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.2e-18 Score=111.29 Aligned_cols=65 Identities=34% Similarity=0.600 Sum_probs=61.0
Q ss_pred EEEcCCCCCCCHHHHHHHhccCCceEEEEEeC------CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeE
Q 029152 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 131 (198)
Q Consensus 67 lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~------~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~ 131 (198)
|||+|||.++++++|+++|++||.|..+++.. +++||||+|.+.++|++|++.||+..|+|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999998876 369999999999999999999999999998764
No 77
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.9e-17 Score=112.84 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=66.5
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEE-EEEeC-----CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS-VKIPV-----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~-v~i~~-----~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
+....+|||+|||+++++++|+++|..||.|.. +.+.. .+|||||+|.+.++|++||+ ||+..|+|+.|.|.+
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHV 83 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEE
Confidence 344568999999999999999999999998876 44433 37999999999999999996 899999999999999
Q ss_pred ccC
Q 029152 135 GRN 137 (198)
Q Consensus 135 a~~ 137 (198)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 754
No 78
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=7e-17 Score=109.64 Aligned_cols=64 Identities=23% Similarity=0.460 Sum_probs=59.7
Q ss_pred CCCCeEEE--cCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCcee
Q 029152 62 SSNTTIFV--GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 125 (198)
Q Consensus 62 ~~~~~lfV--~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~ 125 (198)
.+..+||| +|||..+|+++|+++|++||.|..|.+.++++||||+|.+.++|++|++.|||..|
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccCccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 34678888 55999999999999999999999999999999999999999999999999999887
No 79
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1e-16 Score=110.98 Aligned_cols=74 Identities=24% Similarity=0.343 Sum_probs=65.9
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCH-HHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR-ENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~-~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
...+||+|||+.+|+++|+++|++||+|.+|+|+++++||||+|.++ ++|..|+..|++..+.++.+.|.|+..
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEEC
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeec
Confidence 34569999999999999999999999999999999999999999985 789999999999988877777777653
No 80
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=4.9e-17 Score=112.46 Aligned_cols=76 Identities=17% Similarity=0.299 Sum_probs=65.2
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEE-EeC-----CCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEe
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK-IPV-----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~-i~~-----~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 134 (198)
.....+|||+|||+++|+++|+++|+.||.|..+. +.. .+|||||+|.+.++|++|++ ||+..|+|+.|.|..
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~ 93 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHP 93 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEE
Confidence 44567999999999999999999999999886532 222 25999999999999999996 999999999999998
Q ss_pred ccC
Q 029152 135 GRN 137 (198)
Q Consensus 135 a~~ 137 (198)
+.+
T Consensus 94 ~~~ 96 (112)
T d1wela1 94 ITK 96 (112)
T ss_dssp ECH
T ss_pred cCh
Confidence 753
No 81
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.1e-18 Score=116.29 Aligned_cols=71 Identities=17% Similarity=0.390 Sum_probs=62.4
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEe-----------CCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEE
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 133 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~-----------~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 133 (198)
++|||+|||.+++|++|+++|++||.|..+.+. ++++||||+|.+.++|++|++ ||+..+.|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 689999999999999999999999877655442 358999999999999999985 99999999999997
Q ss_pred ecc
Q 029152 134 WGR 136 (198)
Q Consensus 134 ~a~ 136 (198)
.++
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 82
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=8.2e-16 Score=114.47 Aligned_cols=79 Identities=22% Similarity=0.450 Sum_probs=71.4
Q ss_pred CCCCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEE
Q 029152 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132 (198)
Q Consensus 59 ~~~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v 132 (198)
......++|||+|||+.+++++|+++|+.||.|..+.|+.+ +|||||+|.+.++|++|++ +++..++|+.|+|
T Consensus 92 ~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V 170 (183)
T d1u1qa_ 92 GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEV 170 (183)
T ss_dssp TTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEE
T ss_pred ccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEE
Confidence 34556789999999999999999999999999999988763 5899999999999999997 7889999999999
Q ss_pred EeccCC
Q 029152 133 SWGRNP 138 (198)
Q Consensus 133 ~~a~~~ 138 (198)
.+|.++
T Consensus 171 ~~A~~k 176 (183)
T d1u1qa_ 171 RKALSK 176 (183)
T ss_dssp EECCCH
T ss_pred EecCCc
Confidence 999764
No 83
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=3.6e-16 Score=101.73 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=64.4
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCe-EeEEEeccC
Q 029152 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ-SVRLSWGRN 137 (198)
Q Consensus 63 ~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~-~l~v~~a~~ 137 (198)
+.+.|+|+++|++++++.| ++|++||+|.++++.++++|+||+|.++++|++||+ +||..|+|+ .|.|..+..
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCC
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCC
Confidence 4578999999999887655 579999999999999999999999999999999996 999999997 467887654
No 84
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.4e-16 Score=107.49 Aligned_cols=71 Identities=20% Similarity=0.288 Sum_probs=66.0
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC-----CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~-----kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
+.++|.++..+++|++|+++|++||+|.+|+|+++ +|||||+|.+.++|.+|++.|||..++|+.|+|++.
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 45888888889999999999999999999999763 699999999999999999999999999999999985
No 85
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.3e-14 Score=97.78 Aligned_cols=81 Identities=19% Similarity=0.311 Sum_probs=69.3
Q ss_pred CCCCCCCeEEEcCC--CCCCC---------HHHHHHHhccCCceEEEEEeCC--CcEEEEEeCCHHHHHHHHHHhCCcee
Q 029152 59 EGDSSNTTIFVGGL--DPNVT---------DEDLRQPFSQYGEIASVKIPVG--KGCGFVQFANRENAEEALHKLNGTVI 125 (198)
Q Consensus 59 ~~~~~~~~lfV~~l--~~~~~---------e~~l~~~F~~~G~i~~v~i~~~--kg~afV~f~~~~~a~~a~~~l~~~~~ 125 (198)
.....+++|+|.|| |.++. +++|++.|++||.|..|.+..+ +||+||+|.+.++|.+|+..||+..+
T Consensus 3 ~~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 3 SRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp CCCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CCCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 34456789999998 54321 3688999999999999998875 69999999999999999999999999
Q ss_pred CCeEeEEEeccCCC
Q 029152 126 GKQSVRLSWGRNPA 139 (198)
Q Consensus 126 ~g~~l~v~~a~~~~ 139 (198)
+|+.|+|+++.++.
T Consensus 83 ~gr~i~v~~~~g~~ 96 (99)
T d2dita1 83 GGRQITAQAWDGTT 96 (99)
T ss_dssp TTEECEEEECCSCC
T ss_pred CCEEEEEEEeCCcC
Confidence 99999999987653
No 86
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=2.3e-13 Score=100.91 Aligned_cols=75 Identities=27% Similarity=0.477 Sum_probs=66.3
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC------CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEeccC
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~------kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~~ 137 (198)
.++|||+|||+++++++|+++|++||.|.++.++++ +|||||+|.+.++|++|+. +++..+..+.+.+.+..+
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~~ 84 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAVS 84 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhhh
Confidence 379999999999999999999999999999998753 6899999999999999998 567788888888887765
Q ss_pred CC
Q 029152 138 PA 139 (198)
Q Consensus 138 ~~ 139 (198)
..
T Consensus 85 ~~ 86 (183)
T d1u1qa_ 85 RE 86 (183)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 87
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=4.8e-13 Score=90.80 Aligned_cols=75 Identities=23% Similarity=0.373 Sum_probs=64.7
Q ss_pred CCCeEEEcCC--CCCCC--------HHHHHHHhccCCceEEEEEeCC--------CcEEEEEeCCHHHHHHHHHHhCCce
Q 029152 63 SNTTIFVGGL--DPNVT--------DEDLRQPFSQYGEIASVKIPVG--------KGCGFVQFANRENAEEALHKLNGTV 124 (198)
Q Consensus 63 ~~~~lfV~~l--~~~~~--------e~~l~~~F~~~G~i~~v~i~~~--------kg~afV~f~~~~~a~~a~~~l~~~~ 124 (198)
+++.|.|.|+ +..+. .++|++.|++||.|++|.|.++ .|++||+|.+.++|.+|+..|||..
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 4778999998 44432 3578999999999999999762 4899999999999999999999999
Q ss_pred eCCeEeEEEeccC
Q 029152 125 IGKQSVRLSWGRN 137 (198)
Q Consensus 125 ~~g~~l~v~~a~~ 137 (198)
++|+.|.|.+...
T Consensus 83 f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 83 FANRVVVTKYCDP 95 (104)
T ss_dssp SSSSCCEEEEECH
T ss_pred ECCeEEEEEEcCH
Confidence 9999999999853
No 88
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.84 E-value=5.7e-05 Score=45.69 Aligned_cols=57 Identities=25% Similarity=0.341 Sum_probs=50.0
Q ss_pred HHHHHhccCCceEEEEEeCC---CcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEecc
Q 029152 80 DLRQPFSQYGEIASVKIPVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136 (198)
Q Consensus 80 ~l~~~F~~~G~i~~v~i~~~---kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a~ 136 (198)
.|...|.+++.|.++.|... .-.|-|...+..+|..|+..|+...|++++|.|.++.
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 44567889999999999663 2569999999999999999999999999999999985
No 89
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.60 E-value=0.00013 Score=46.77 Aligned_cols=72 Identities=17% Similarity=0.284 Sum_probs=58.3
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCC--------CcEEEEEeCCHHHHHHHHHHhCCceeCC---e--EeE
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG--------KGCGFVQFANRENAEEALHKLNGTVIGK---Q--SVR 131 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~--------kg~afV~f~~~~~a~~a~~~l~~~~~~g---~--~l~ 131 (198)
++|-|+.||+.+||+++.+.+...+++........ -.-|+|.|.+.+++..-.+..+|+.+-+ . .-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 68999999999999999999998888877665431 2679999999999999999999998732 1 335
Q ss_pred EEecc
Q 029152 132 LSWGR 136 (198)
Q Consensus 132 v~~a~ 136 (198)
|++|-
T Consensus 82 VE~AP 86 (91)
T d1uw4a_ 82 VEFAP 86 (91)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 66664
No 90
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.51 E-value=0.00014 Score=46.23 Aligned_cols=54 Identities=30% Similarity=0.462 Sum_probs=47.5
Q ss_pred HHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCceeCCeEeEEEec
Q 029152 79 EDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135 (198)
Q Consensus 79 ~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~a 135 (198)
++|.+.|..||+|.-|+++. +--.|+|.+-++|.+|++ +++.++.|+.|+|...
T Consensus 39 ~~Llq~l~~~GeViLvRFv~--d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~ 92 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQ--GQMLVTFADSHSALSVLD-VDGMKVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEET--TEEEEECSCSHHHHHHHH-GGGSEETTEEEEEECC
T ss_pred HHHHHHHhhCCeEEEEEEeC--CeEEEEECCcHHHHHHhc-cCCeEEcceEEEEecC
Confidence 46778889999999998875 478999999999999998 8999999999999854
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.12 E-value=0.021 Score=36.38 Aligned_cols=59 Identities=19% Similarity=0.268 Sum_probs=46.7
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhC
Q 029152 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121 (198)
Q Consensus 61 ~~~~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~ 121 (198)
.+...-||.-.+|..+...+|.++|+.||.|.- ..+ +---|||...+.+.|+.++..+.
T Consensus 12 ~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~V-swI-ddTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 12 QPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQI-SWI-DDTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCCSEEEEECCTTCCHHHHHHHHTTTCSCCC-EEE-ETTEEEEECSCHHHHHHHHHHHH
T ss_pred CCCcceeEEEeCCcccchhHHHHHhcCCCceEE-EEe-cCceEEEEecCHHHHHHHHHHhc
Confidence 334456888899999999999999999998643 333 33589999999999999887543
No 92
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.34 E-value=0.29 Score=23.22 Aligned_cols=24 Identities=21% Similarity=0.325 Sum_probs=19.8
Q ss_pred Ccccchhhhc--chhhhhhhhhhhhccCCC
Q 029152 1 MEKRRHCCER--KGEREERTLLYKLCFHRN 28 (198)
Q Consensus 1 ~~~~~~~c~~--~~~~~~~~~~~~~c~~~~ 28 (198)
|+|+..+|.| .+.|-+ ++.|.+-|
T Consensus 2 ~~kkkelCKfYvqGyCtr----genC~ymH 27 (29)
T d2cqea2 2 LPKKRELCKFYITGFCAR----AENCPYMH 27 (29)
T ss_dssp CSCCCSBCTTTTTTCCSC----STTCSSBS
T ss_pred cchhhhhhhhheeeeecC----CcCccccc
Confidence 5788999999 888888 88887755
No 93
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=72.70 E-value=4.3 Score=25.92 Aligned_cols=41 Identities=15% Similarity=0.323 Sum_probs=31.3
Q ss_pred HHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCC
Q 029152 79 EDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122 (198)
Q Consensus 79 ~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~ 122 (198)
.++++.+..+|. ++|.-+-..+|..|++.++|+.+++.+..
T Consensus 60 ~~~~~~L~~~g~---~~MSGSGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SRLTGTGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSC---EEECTTSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhccc---ceecCCCCEEEEEeCCHHHHHHHHHHcCc
Confidence 355566777886 34554567899999999999999998853
No 94
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.25 E-value=9.6 Score=22.08 Aligned_cols=57 Identities=16% Similarity=0.268 Sum_probs=46.9
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeC----CHHHHHHHHHHh
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA----NRENAEEALHKL 120 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~----~~~~a~~a~~~l 120 (198)
.-+|.|.++.=..-...|++.|.+.-.|.++++....+-+-|+|. +.+...++|+.+
T Consensus 9 ~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~ 69 (79)
T d1kvja_ 9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDM 69 (79)
T ss_dssp EEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhc
Confidence 457899999877778899999999988999999888889999985 556667777654
No 95
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.60 E-value=7.7 Score=22.08 Aligned_cols=54 Identities=11% Similarity=0.213 Sum_probs=42.4
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCC---HHHHHHHHHH
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN---RENAEEALHK 119 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~---~~~a~~a~~~ 119 (198)
+|-|.++.=..-...|++.+.+.-.|.++.+....+-+.|+|.. .++..++|+.
T Consensus 5 ~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~ 61 (72)
T d2ggpb1 5 ILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61 (72)
T ss_dssp EEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHH
Confidence 56677777666678999999999899999998888899999974 4555556554
No 96
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=60.57 E-value=11 Score=23.65 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=33.4
Q ss_pred HHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHhCCc
Q 029152 79 EDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123 (198)
Q Consensus 79 ~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~~l~~~ 123 (198)
+++++.+..+|... +.|.-+-...|..|.+.++|+++.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~mSGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLMSGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEECTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eeecCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45666677777633 555556678999999999999999988654
No 97
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=53.32 E-value=16 Score=20.39 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=45.8
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeC----CHHHHHHHHHHhCCce
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA----NRENAEEALHKLNGTV 124 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~----~~~~a~~a~~~l~~~~ 124 (198)
.+|.|.|+.=..-...|++.+++.-.|.++.+....+-+.|+|. +.+...++|+.+ |+.
T Consensus 4 ~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~-Gy~ 66 (69)
T d2qifa1 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQ-GYD 66 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHT-TCE
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHh-CCc
Confidence 45788888766667899999999888999999888899999995 455666666653 443
No 98
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.72 E-value=19 Score=20.12 Aligned_cols=56 Identities=18% Similarity=0.339 Sum_probs=44.0
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeC----CHHHHHHHHHHh
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA----NRENAEEALHKL 120 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~----~~~~a~~a~~~l 120 (198)
..|-|.++.=..-...|++.+.+.-.|.++.+....+-+.|+|. +.+...++|+.+
T Consensus 5 ~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~ 64 (72)
T d2aw0a_ 5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDM 64 (72)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhh
Confidence 45678887666667899999999888999999888899999994 456666676654
No 99
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=44.51 E-value=7.4 Score=23.16 Aligned_cols=50 Identities=12% Similarity=0.259 Sum_probs=35.3
Q ss_pred EEEcCCCCCCCHHHHHHHhcc-CC-ceEEEEEeCC---CcEEEEEeCCHHHHHHH
Q 029152 67 IFVGGLDPNVTDEDLRQPFSQ-YG-EIASVKIPVG---KGCGFVQFANRENAEEA 116 (198)
Q Consensus 67 lfV~~l~~~~~e~~l~~~F~~-~G-~i~~v~i~~~---kg~afV~f~~~~~a~~a 116 (198)
.|+-.++...+..+|++.++. |+ .|..|..... +--|||.+...++|...
T Consensus 23 ~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~KkA~V~L~~~~~a~di 77 (81)
T d1vqos1 23 KLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEV 77 (81)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSSEEEEEEECTTSCHHHH
T ss_pred EEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCcEEEEEEeCCCCcHHHH
Confidence 455556788999999988876 66 6777765432 35699999876665544
No 100
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=44.05 E-value=24 Score=19.89 Aligned_cols=45 Identities=16% Similarity=0.049 Sum_probs=29.6
Q ss_pred HHHHHHhccCC-ceEEEEEeCCCcEEEE--EeCCHHHHHHHHHHhCCce
Q 029152 79 EDLRQPFSQYG-EIASVKIPVGKGCGFV--QFANRENAEEALHKLNGTV 124 (198)
Q Consensus 79 ~~l~~~F~~~G-~i~~v~i~~~kg~afV--~f~~~~~a~~a~~~l~~~~ 124 (198)
.++-+.|.+.| .|..+....+++++.+ ..++++.|.++++. +|..
T Consensus 14 ~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~vdd~~~a~~~L~~-~G~~ 61 (71)
T d2f06a1 14 AKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKE-KKVD 61 (71)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH-TTCE
T ss_pred HHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEECCHHHHHHHHHH-CCCE
Confidence 45667777776 6777766555556654 44688888888874 5543
No 101
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=39.31 E-value=28 Score=19.33 Aligned_cols=57 Identities=11% Similarity=0.215 Sum_probs=45.0
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeC----CHHHHHHHHHHh
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA----NRENAEEALHKL 120 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~----~~~~a~~a~~~l 120 (198)
..+|-|.|+.=..-...|++.+.+.-.|.++.+....+-+.|+|. +.+...++++.+
T Consensus 7 ~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~ 67 (72)
T d1p6ta1 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKL 67 (72)
T ss_dssp EEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHH
T ss_pred EEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 346778888776678899999999989999999888889999995 345666666654
No 102
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.78 E-value=1.9 Score=21.59 Aligned_cols=15 Identities=13% Similarity=0.000 Sum_probs=11.3
Q ss_pred cccchhhhcchhhhh
Q 029152 2 EKRRHCCERKGEREE 16 (198)
Q Consensus 2 ~~~~~~c~~~~~~~~ 16 (198)
++||++|.+.+.++.
T Consensus 5 gekP~~C~~C~k~F~ 19 (36)
T d2ct1a2 5 GEKPYECYICHARFT 19 (36)
T ss_dssp CCCSEECTTTCCEES
T ss_pred CCCCEeCCCCccccc
Confidence 689999998555544
No 103
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=35.09 E-value=32 Score=18.66 Aligned_cols=54 Identities=13% Similarity=0.114 Sum_probs=40.1
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeC-CHHHHHHHHHH
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA-NRENAEEALHK 119 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~-~~~~a~~a~~~ 119 (198)
+|-|.++.=..-...|++.+.+...|.++.+....+.+.|+.. +.++..++|+.
T Consensus 4 ~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~ 58 (64)
T d1sb6a_ 4 QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58 (64)
T ss_dssp EEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHH
T ss_pred EEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHH
Confidence 5667777766667788888888777889999888888888876 45555556554
No 104
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=33.04 E-value=39 Score=19.12 Aligned_cols=54 Identities=11% Similarity=0.205 Sum_probs=43.5
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeC----CHHHHHHHHHH
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA----NRENAEEALHK 119 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~----~~~~a~~a~~~ 119 (198)
.+-|.++.=..-...|++.+...-.|.++.+....+-+.|+|. +.+...++|+.
T Consensus 5 ~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 62 (79)
T d1p6ta2 5 EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDK 62 (79)
T ss_dssp EEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 5778888777778899999999888999999888899999995 34555556554
No 105
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=30.32 E-value=21 Score=25.65 Aligned_cols=44 Identities=18% Similarity=0.187 Sum_probs=29.5
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCHHHHHHHHH
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~~~a~~a~~ 118 (198)
....|+|||++++..-|..++.....+....++ -..|-|++-+.
T Consensus 91 ~~~vvgNlPY~Iss~Il~~l~~~~~~~~~~~~m----------~QkEvA~Ri~A 134 (252)
T d1qyra_ 91 PLRVFGNLPYNISTPLMFHLFSYTDAIADMHFM----------LQKEVVNRLVA 134 (252)
T ss_dssp CEEEEEECCTTTHHHHHHHHHTTGGGEEEEEEE----------EEHHHHHHHHC
T ss_pred CeEEEecchHHHHHHHHHHhcccccceehhhhh----------hhHHHHHHhcc
Confidence 357789999999999888887655455443332 23566666543
No 106
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.87 E-value=3.1 Score=20.67 Aligned_cols=15 Identities=20% Similarity=0.091 Sum_probs=11.1
Q ss_pred cccchhhhcchhhhh
Q 029152 2 EKRRHCCERKGEREE 16 (198)
Q Consensus 2 ~~~~~~c~~~~~~~~ 16 (198)
++||+.|...+..|.
T Consensus 4 GekPy~C~~C~k~F~ 18 (35)
T d1srka_ 4 GKRPFVCRICLSAFT 18 (35)
T ss_dssp CCSCEECSSSCCEES
T ss_pred CCccccCCCCCCccc
Confidence 689999998555544
No 107
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.36 E-value=44 Score=18.54 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=42.2
Q ss_pred CeEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCCH--HHHHHHHHHh
Q 029152 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR--ENAEEALHKL 120 (198)
Q Consensus 65 ~~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~~--~~a~~a~~~l 120 (198)
.++.|.++.=..-...|++.+.+.-.|.++.+....+.+.|+|... +...++|+.+
T Consensus 5 ~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~ 62 (73)
T d1mwza_ 5 YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKA 62 (73)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHH
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHc
Confidence 4577777765556789999999998899999988888999998643 4445555543
No 108
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=28.37 E-value=5.6 Score=18.74 Aligned_cols=10 Identities=20% Similarity=0.311 Sum_probs=7.3
Q ss_pred cchhhhcchh
Q 029152 4 RRHCCERKGE 13 (198)
Q Consensus 4 ~~~~c~~~~~ 13 (198)
|++||+|.++
T Consensus 2 k~~iCsf~dC 11 (31)
T d1tf3a1 2 KRYICSFADC 11 (31)
T ss_dssp CCEECSSGGG
T ss_pred CceEeeCCCc
Confidence 5789998553
No 109
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=26.34 E-value=49 Score=18.04 Aligned_cols=53 Identities=17% Similarity=0.263 Sum_probs=41.7
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCC----HHHHHHHHH
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN----RENAEEALH 118 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~----~~~a~~a~~ 118 (198)
.+.|.|+.=..-...|++.+.+.-.|.++++....+.+-|+|.. .+...++++
T Consensus 3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~ 59 (68)
T d1cpza_ 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN 59 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH
T ss_pred EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH
Confidence 46788887666778999999999889999999888999999853 344555554
No 110
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=26.13 E-value=51 Score=18.19 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=42.8
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceEEEEEeCCCcEEEEEeCC----HHHHHHHHHH
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN----RENAEEALHK 119 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~----~~~a~~a~~~ 119 (198)
+|-|.|+.=..-...|++.+.+.-.|.++++....+-+-|+|.. .++..++|+.
T Consensus 6 ~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 63 (72)
T d1osda_ 6 TLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATAD 63 (72)
T ss_dssp EEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 46677887777788999999999899999998888999999854 4555566654
No 111
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.59 E-value=5.3 Score=19.85 Aligned_cols=15 Identities=7% Similarity=0.022 Sum_probs=10.6
Q ss_pred cccchhhhcchhhhh
Q 029152 2 EKRRHCCERKGEREE 16 (198)
Q Consensus 2 ~~~~~~c~~~~~~~~ 16 (198)
++||+.|...+.++.
T Consensus 8 geKPy~C~~C~k~F~ 22 (37)
T d1p7aa_ 8 GIKPFQCPDCDRSFS 22 (37)
T ss_dssp CSSSBCCTTTCCCBS
T ss_pred CccCeEeCCCCCEec
Confidence 689999987554444
No 112
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.71 E-value=7.2 Score=18.78 Aligned_cols=10 Identities=30% Similarity=0.767 Sum_probs=8.1
Q ss_pred ccchhhhcch
Q 029152 3 KRRHCCERKG 12 (198)
Q Consensus 3 ~~~~~c~~~~ 12 (198)
|||+.|.+.+
T Consensus 1 ErP~~C~~pg 10 (32)
T d1zfda_ 1 DRPYSCDHPG 10 (32)
T ss_dssp CCSBCCCCTT
T ss_pred CcCeECcCCC
Confidence 6899999855
No 113
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.51 E-value=25 Score=26.11 Aligned_cols=23 Identities=13% Similarity=0.078 Sum_probs=18.4
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhc
Q 029152 64 NTTIFVGGLDPNVTDEDLRQPFS 86 (198)
Q Consensus 64 ~~~lfV~~l~~~~~e~~l~~~F~ 86 (198)
...++|+|||.+++..-|..++.
T Consensus 127 ~~~~vvaNLPy~iss~il~~~l~ 149 (322)
T d1i4wa_ 127 DKFLTVANVTGEGSEGLIMQWLS 149 (322)
T ss_dssp EEEEEEEECCSTTHHHHHHHHHH
T ss_pred CceEEEEeCCchhhHHHHHHHHH
Confidence 34568999999999988877664
No 114
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=22.17 E-value=12 Score=18.07 Aligned_cols=12 Identities=25% Similarity=0.844 Sum_probs=9.5
Q ss_pred CHHHHHHHhccC
Q 029152 77 TDEDLRQPFSQY 88 (198)
Q Consensus 77 ~e~~l~~~F~~~ 88 (198)
+|++|++.|.-|
T Consensus 1 seeel~eAF~~F 12 (33)
T d2hf5a1 1 SEEEIREAFRVF 12 (33)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 578888888877
No 115
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.16 E-value=5.7 Score=19.61 Aligned_cols=15 Identities=7% Similarity=0.171 Sum_probs=11.0
Q ss_pred cccchhhhcchhhhh
Q 029152 2 EKRRHCCERKGEREE 16 (198)
Q Consensus 2 ~~~~~~c~~~~~~~~ 16 (198)
++||++|...+.++.
T Consensus 5 gekPy~C~~C~k~F~ 19 (36)
T d1x6ha2 5 GEKPYACSHCDKTFR 19 (36)
T ss_dssp CCCCEECSSSSCEES
T ss_pred CCCCEECCCCCCCcC
Confidence 689999997555544
No 116
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.88 E-value=5.7 Score=18.55 Aligned_cols=14 Identities=7% Similarity=0.026 Sum_probs=9.2
Q ss_pred ccchhhhcchhhhh
Q 029152 3 KRRHCCERKGEREE 16 (198)
Q Consensus 3 ~~~~~c~~~~~~~~ 16 (198)
|||++|...+..|.
T Consensus 1 EKPy~C~~C~k~F~ 14 (28)
T d1a1ia2 1 QKPFQCRICMRNFS 14 (28)
T ss_dssp CCCEECTTTCCEES
T ss_pred CcCccCCCCcCEec
Confidence 68888887554443
No 117
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.67 E-value=26 Score=25.54 Aligned_cols=27 Identities=7% Similarity=-0.048 Sum_probs=20.6
Q ss_pred eEEEcCCCCCCCHHHHHHHhccCCceE
Q 029152 66 TIFVGGLDPNVTDEDLRQPFSQYGEIA 92 (198)
Q Consensus 66 ~lfV~~l~~~~~e~~l~~~F~~~G~i~ 92 (198)
...|+|||++++..-|..++...-.+.
T Consensus 88 ~~vV~NLPY~Iss~il~~~~~~~~~~~ 114 (278)
T d1zq9a1 88 DTCVANLPYQISSPFVFKLLLHRPFFR 114 (278)
T ss_dssp SEEEEECCGGGHHHHHHHHHHCSSCCS
T ss_pred hhhhcchHHHHHHHHHHHHHhhCCccc
Confidence 467999999999998888776543333
No 118
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.51 E-value=6.8 Score=17.52 Aligned_cols=12 Identities=33% Similarity=0.404 Sum_probs=6.6
Q ss_pred chhhhcchhhhh
Q 029152 5 RHCCERKGEREE 16 (198)
Q Consensus 5 ~~~c~~~~~~~~ 16 (198)
||+|.+.+.|+.
T Consensus 1 phkc~~c~kcfs 12 (26)
T d2dmda2 1 PHKCEVCGKCFS 12 (26)
T ss_dssp CCCBTTTTBCCC
T ss_pred CCccchhhhHhc
Confidence 567766554443
No 119
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.28 E-value=5.5 Score=18.32 Aligned_cols=12 Identities=17% Similarity=0.146 Sum_probs=7.7
Q ss_pred ccchhhhcchhh
Q 029152 3 KRRHCCERKGER 14 (198)
Q Consensus 3 ~~~~~c~~~~~~ 14 (198)
+||++|.+...+
T Consensus 1 erpfkcqlcsy~ 12 (29)
T d2dmda3 1 ERPFKCQICPYA 12 (29)
T ss_dssp CCCEECSSSSCE
T ss_pred CCcceeeecccc
Confidence 577888764444
No 120
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.27 E-value=6 Score=19.23 Aligned_cols=15 Identities=13% Similarity=0.195 Sum_probs=11.0
Q ss_pred cccchhhhcchhhhh
Q 029152 2 EKRRHCCERKGEREE 16 (198)
Q Consensus 2 ~~~~~~c~~~~~~~~ 16 (198)
++||++|...+.+|.
T Consensus 4 gekpy~C~~Cgk~F~ 18 (33)
T d1x6ea1 4 GEKPYGCVECGKAFS 18 (33)
T ss_dssp TCCCEECSSSCCEES
T ss_pred CCCCeeCCCCCCEeC
Confidence 689999997555544
Done!