BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029153
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25864|RK9_ARATH 50S ribosomal protein L9, chloroplastic OS=Arabidopsis thaliana
GN=RPL9 PE=1 SV=1
Length = 197
Score = 273 bits (697), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 176/196 (89%), Gaps = 1/196 (0%)
Query: 4 SSSTAATLSWSSSSFF-QTFGNTVNESVKLPDKRSALLVLAQKKAKKTRKIILKEDVAEL 62
+SSTA +LSWSSS + +F NE++K+ ++R V++QKKAKK RK+ILKEDV +L
Sbjct: 2 ASSTALSLSWSSSPCWSHSFNGGANETLKVSERRFNFEVVSQKKAKKLRKVILKEDVTDL 61
Query: 63 GKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIF 122
GK+GQLLDVKAGF+RN+L P GKAQ++TPLLLKE+KME+ERIEAEK+RVKEEAQQLA++F
Sbjct: 62 GKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLAMVF 121
Query: 123 ETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLK 182
+TVGAFKVKRKGGKGK IFGSVTAQD+VDIIK+QLQ+D+DK++V LPEIRETGEYIA+LK
Sbjct: 122 QTVGAFKVKRKGGKGKLIFGSVTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIAELK 181
Query: 183 LHPEVTARIRLNVFAN 198
LHP+VTAR+++NVFAN
Sbjct: 182 LHPDVTARVKINVFAN 197
>sp|Q8L803|RK9_WHEAT 50S ribosomal protein L9, chloroplastic OS=Triticum aestivum
GN=RPL9 PE=2 SV=1
Length = 191
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 162/196 (82%), Gaps = 10/196 (5%)
Query: 3 ASSSTAATLSWSSSSFFQTFGNTVNESVKLPDKRS-ALLVLAQKKAKKTRKIILKEDVAE 61
AS S A+TL W++++F + +L +R+ +L+++AQ + KK R++ILK+D+ E
Sbjct: 2 ASPSCASTLPWTAAAF--------SYPRRLQTRRAPSLVIVAQGRVKKYRQVILKDDIDE 53
Query: 62 L-GKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLAL 120
+ GKKG + V+AGFYRN+L P GKA ++TP +LKEM++E+ERIEAEKKRVKEEAQQLA
Sbjct: 54 ISGKKGDTMKVRAGFYRNFLLPKGKATLLTPDVLKEMQLEQERIEAEKKRVKEEAQQLAR 113
Query: 121 IFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQ 180
+FET+GAFKV RKGGKGKQIFGSVTAQD+VDIIK+QL RDVDK++V++PEIRE GEY+A+
Sbjct: 114 VFETIGAFKVPRKGGKGKQIFGSVTAQDLVDIIKSQLNRDVDKRLVEVPEIREVGEYVAE 173
Query: 181 LKLHPEVTARIRLNVF 196
+KLHP+VTA++RL V+
Sbjct: 174 IKLHPDVTAKVRLTVY 189
>sp|P11894|RK9_PEA 50S ribosomal protein L9, chloroplastic OS=Pisum sativum GN=RPL9
PE=2 SV=2
Length = 194
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 155/179 (86%)
Query: 20 QTFGNTVNESVKLPDKRSALLVLAQKKAKKTRKIILKEDVAELGKKGQLLDVKAGFYRNY 79
+F + + P+K S +V AQKK KKTRKIILKED+ +GKKG+LLDV+ GF+RN+
Sbjct: 16 HSFAANLKTCSQFPNKSSGFMVFAQKKTKKTRKIILKEDIVNVGKKGELLDVRVGFFRNF 75
Query: 80 LHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQ 139
L P GKAQ+VTP +LKEMK+EEERIEAEK+RV EEAQQLAL FET GAFKVKRKGGKGKQ
Sbjct: 76 LFPSGKAQLVTPGVLKEMKIEEERIEAEKRRVLEEAQQLALFFETFGAFKVKRKGGKGKQ 135
Query: 140 IFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 198
IFGSVTAQD+VDIIKAQLQR+VDK+IV+LPEIRETGEYIA+LKLHP+VTA++R+NV AN
Sbjct: 136 IFGSVTAQDLVDIIKAQLQREVDKRIVNLPEIRETGEYIAELKLHPDVTAKVRVNVIAN 194
>sp|Q6JJ61|RK9_IPOTF 50S ribosomal protein L9, chloroplastic OS=Ipomoea trifida GN=RPL9
PE=3 SV=1
Length = 199
Score = 220 bits (560), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/170 (78%), Positives = 151/170 (88%)
Query: 29 SVKLPDKRSALLVLAQKKAKKTRKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQI 88
+ KL ++ S ++ QKK KK RKIILKEDV ELGKKGQL++V+AG+YRNYL PMG AQI
Sbjct: 30 TAKLVERTSNFTIVCQKKTKKIRKIILKEDVQELGKKGQLMNVRAGYYRNYLLPMGMAQI 89
Query: 89 VTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQD 148
VTP LLKEMK+EEERIEAEKKRVKEEAQQLALIFETVG FKVKRKGGKGKQIFGSVTAQD
Sbjct: 90 VTPQLLKEMKIEEERIEAEKKRVKEEAQQLALIFETVGGFKVKRKGGKGKQIFGSVTAQD 149
Query: 149 VVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 198
+VDIIKAQLQR+VDK+IV LPEIRETG Y A+LKLHPEVTAR+++ V AN
Sbjct: 150 LVDIIKAQLQREVDKRIVSLPEIRETGAYTAELKLHPEVTARVQVIVSAN 199
>sp|B7KAD1|RL9_CYAP7 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7424)
GN=rplI PE=3 SV=1
Length = 152
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 102/147 (69%), Gaps = 6/147 (4%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L ++V +LGK G L++V G+ RNYL P G A I TP +L+++ E+R E E++R+
Sbjct: 6 QVVLTKNVNKLGKSGDLVEVAPGYARNYLLPQGIANIATPGILRQV---EQRREKERQRL 62
Query: 112 ---KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
++EA+ +T+G F ++++ G+G+ IFG+VT Q+V D+IK +++D++ + L
Sbjct: 63 LAERQEAEARKTALQTIGRFVIRKQVGEGEAIFGTVTTQEVADVIKENTSQEIDRRGITL 122
Query: 169 PEIRETGEYIAQLKLHPEVTARIRLNV 195
PEI +TG Y AQ+KLHPEVTA I + V
Sbjct: 123 PEISKTGFYKAQVKLHPEVTAEIEIQV 149
>sp|B1XN09|RL9_SYNP2 50S ribosomal protein L9 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplI PE=3 SV=1
Length = 152
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 102/150 (68%), Gaps = 10/150 (6%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L +DV +LG G L++V G+ RNYL P G A + TP +L+++ E+R E E++R+
Sbjct: 6 QVVLNQDVRKLGNNGDLVEVAPGYARNYLLPQGIASLATPGILRQV---EQRREKERQRL 62
Query: 112 -----KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIV 166
EA+++AL +TVG ++++ G+ QIFG+VT QDV D IK + +DVD++ +
Sbjct: 63 LAELQDAEARKVAL--KTVGKLIIRKQVGEENQIFGTVTTQDVADAIKERAGQDVDRRGI 120
Query: 167 DLPEIRETGEYIAQLKLHPEVTARIRLNVF 196
LPEI +TG Y AQ+KLHPEVTA ++ +V
Sbjct: 121 TLPEIGKTGSYEAQVKLHPEVTATVQFDVI 150
>sp|B7JUZ9|RL9_CYAP8 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 8801)
GN=rplI PE=3 SV=1
Length = 152
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 97/147 (65%), Gaps = 6/147 (4%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+I+L + + +LG+ G L++V G+ RNYL P G I TP +L+++ E+R E E +R+
Sbjct: 6 QIVLNKTINKLGQTGDLVEVAPGYARNYLIPQGMGVIATPGILRQV---EQRKEKEMQRL 62
Query: 112 ---KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
K+ A+ + T+G F ++++ G+G+ IFG+VT Q+V D I+A ++VD++ + L
Sbjct: 63 LAEKQAAEARKVALSTIGRFTIRKQVGEGEAIFGTVTTQEVADAIQAATNQEVDRRGITL 122
Query: 169 PEIRETGEYIAQLKLHPEVTARIRLNV 195
PEI +TG Y A +KLHPEVTA I + V
Sbjct: 123 PEISQTGFYKATVKLHPEVTAEIEIQV 149
>sp|Q7UZJ1|RL9_PROMP 50S ribosomal protein L9 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rplI PE=3 SV=1
Length = 151
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLK--EMKMEEERIEAEKK 109
K++L E VA LG+ G +++V G+ RN+L P GKA VTP +LK E K +E+I AEK
Sbjct: 6 KVVLTESVATLGRDGDVVEVAPGYARNFLLPFGKAANVTPSILKQIERKRAKEKIAAEK- 64
Query: 110 RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
VK+EA T+G F +K++ G+ +FG+VT DV + I+A ++D+D++ + +P
Sbjct: 65 -VKQEAIDFKTALATIGRFTIKKQVGEDGVLFGTVTNGDVAEAIEAATKKDIDRRDITVP 123
Query: 170 EIRETGEYIAQLKLHPEVTARIRLNV 195
+I G ++A++KLH EV+A + + V
Sbjct: 124 DIHNLGSFVAKIKLHQEVSAEVNIEV 149
>sp|A2BTQ4|RL9_PROMS 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain AS9601)
GN=rplI PE=3 SV=1
Length = 151
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLK--EMKMEEERIEAEKK 109
++ L E +A LGK+G L+DV G+ RN+L P GKA VTP +LK E K E+E+I A K
Sbjct: 6 QVALTESIASLGKEGDLVDVAPGYARNFLLPYGKAMNVTPAVLKQIERKKEKEKIAAGK- 64
Query: 110 RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
+K+EA T+G F +K++ G+ +FG+VT DV + I+A ++++D++ + +P
Sbjct: 65 -LKQEALDFQTALSTIGRFTIKKQVGEDGVLFGTVTNGDVAEAIEAATKKEIDRRNITVP 123
Query: 170 EIRETGEYIAQLKLHPEVTARIRLNV 195
+I G + A++KLHPEV A + + V
Sbjct: 124 DIHNLGAFTAKIKLHPEVNAEVNIEV 149
>sp|Q317W9|RL9_PROM9 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplI2 PE=3 SV=1
Length = 151
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLK--EMKMEEERIEAEKK 109
K+ L E +A LGK+G L++V G+ RN+L P GKA VTP +LK E K E+E+I A+K
Sbjct: 6 KVALTESIASLGKEGDLVEVAPGYARNFLLPYGKAMNVTPAVLKQIERKKEKEKIAADK- 64
Query: 110 RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
+K+EA T+G F +K++ G+ +FG+VT DV + I+A ++++D++ + +P
Sbjct: 65 -LKQEALDFQTALSTIGRFTIKKQVGEDGVLFGTVTNGDVAEAIEAATKKEIDRRNITVP 123
Query: 170 EIRETGEYIAQLKLHPEVTARIRLNV 195
+I G + A++KLHP+V A + + V
Sbjct: 124 DIHNLGSFTAKIKLHPDVNAEVNIEV 149
>sp|A3PFG1|RL9_PROM0 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplI PE=3 SV=1
Length = 151
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLK--EMKMEEERIEAEKK 109
++ L E +A LGK+G L++V G+ RN+L P GKA VTP +LK E K E+E+I A+K
Sbjct: 6 QVALTESIASLGKEGDLVEVAPGYARNFLLPYGKAMNVTPAVLKQIERKKEKEKIAADK- 64
Query: 110 RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
+K+EA T+G F +K++ G+ +FG+VT DV + I+A ++++D++ + +P
Sbjct: 65 -LKQEALDFQTALSTIGRFTIKKQVGEDGVLFGTVTNGDVAEAIEAATKKEIDRRNITVP 123
Query: 170 EIRETGEYIAQLKLHPEVTARIRLNV 195
+I G + A++KLHPEV A + + V
Sbjct: 124 DIHNLGSFTAKIKLHPEVNAEVNIEV 149
>sp|Q0I6E0|RL9_SYNS3 50S ribosomal protein L9 OS=Synechococcus sp. (strain CC9311)
GN=rplI PE=3 SV=1
Length = 152
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKK-R 110
+++L ED+ LG+ G L+DV G+ RN+L P GKA VTP ++K+++ + EAE++
Sbjct: 6 QVVLNEDILSLGRNGDLVDVAPGYARNFLLPFGKAVPVTPAVMKQVEHRRAK-EAERQAT 64
Query: 111 VKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 170
+K++A +T+G F VK++ G +FG+VT DV + I++ +++VD++ + +P+
Sbjct: 65 LKQDAVAFRTALDTIGRFTVKKQTGGDDVLFGTVTNGDVAEAIESATKKEVDRRDITVPD 124
Query: 171 IRETGEYIAQLKLHPEVTARIRLNVFA 197
I TG Y Q+KLH EVTA I L V +
Sbjct: 125 IHRTGSYKVQVKLHSEVTAEINLEVVS 151
>sp|A2BZ59|RL9_PROM5 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplI PE=3 SV=1
Length = 151
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLK--EMKMEEERIEAEKK 109
K++L E +A LG+ G +++V G+ RNYL P GKA VTP +LK E K +E+I AEK
Sbjct: 6 KVVLTESIATLGRDGDVVEVAPGYARNYLLPFGKASNVTPSILKQIERKRAKEKIAAEK- 64
Query: 110 RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
+K+EA T+G F +K++ G+ +FG+VT DV + I++ ++D+D++ + +P
Sbjct: 65 -LKQEAIDFKTALTTIGRFTIKKQVGEDGVLFGTVTNGDVAEAIQSATKKDIDRRDITVP 123
Query: 170 EIRETGEYIAQLKLHPEVTARIRLNV 195
+I G ++A++KLH EV+A + + V
Sbjct: 124 DIHNLGSFVAKIKLHQEVSAEVNIEV 149
>sp|Q3AUG8|RL9_SYNS9 50S ribosomal protein L9 OS=Synechococcus sp. (strain CC9902)
GN=rplI PE=3 SV=1
Length = 152
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 91/146 (62%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L ED+ LGK G L+DV G+ RN+L P GKA VTP ++K+++ + + +
Sbjct: 6 QVVLNEDILSLGKDGDLVDVAPGYARNFLLPFGKAVPVTPAVMKQVEHRRAKEVERQAAL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
K+EA +T+G F VK++ G+ +FG+VT DV + I+ ++++D++ + +PEI
Sbjct: 66 KQEALNFKTALDTIGRFTVKKQVGEDNVLFGTVTNGDVAEAIEESTKKEIDRRDILVPEI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFA 197
TG+Y +KLH EVTA I L V +
Sbjct: 126 HRTGKYTVTVKLHSEVTAEINLEVVS 151
>sp|A5GWP0|RL9_SYNR3 50S ribosomal protein L9 OS=Synechococcus sp. (strain RCC307)
GN=rplI PE=3 SV=1
Length = 152
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 93/151 (61%), Gaps = 8/151 (5%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKM----EEERIEAE 107
+++L ED+ LGK G L++V G+ RN+L P GKA VTP +LK+++ E ER+ A
Sbjct: 6 QVVLSEDILSLGKDGDLVEVAPGYARNFLLPHGKALPVTPAVLKQVEHRRAKEAERLAA- 64
Query: 108 KKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVD 167
+K +A +T+G F VK++ G +FG+VT DV + I++ ++ VDK+ +
Sbjct: 65 ---LKADAVAFRTALDTIGRFTVKKQTGGDDVLFGTVTNVDVAEAIESATKKLVDKRDIT 121
Query: 168 LPEIRETGEYIAQLKLHPEVTARIRLNVFAN 198
+PE+ TG Y Q+KLHPEV A I L V ++
Sbjct: 122 VPEVHRTGNYKVQVKLHPEVVAEINLEVVSH 152
>sp|P42352|RL9_SYNY3 50S ribosomal protein L9 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplI PE=3 SV=2
Length = 152
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 98/148 (66%), Gaps = 8/148 (5%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKM----EEERIEAE 107
K++L E + +LG G L++V G+ RNYL P G + TP +L++++ E ER++AE
Sbjct: 6 KVVLNETINKLGFTGDLVEVAPGYARNYLIPKGLGVVATPGILRQVEQRRLKELERLKAE 65
Query: 108 KKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVD 167
K EA+++AL ET+G F +K++ G+ + IFG+VT Q+V D ++A + +D++ +
Sbjct: 66 KD--AAEARKVAL--ETIGRFVIKKQVGEAEAIFGTVTTQEVADAVEAATNQSLDRRGIS 121
Query: 168 LPEIRETGEYIAQLKLHPEVTARIRLNV 195
LP+I +TG Y AQ+KLHPEV A + + V
Sbjct: 122 LPDIHKTGFYQAQIKLHPEVIATVEVQV 149
>sp|A8G7H8|RL9_PROM2 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplI PE=3 SV=1
Length = 151
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLK--EMKMEEERIEAEKK 109
++ L E +A LGK+G L++V G+ RN+L P GKA VTP +LK E K E+E+I A+K
Sbjct: 6 QLALTESIASLGKEGDLVEVAPGYARNFLLPYGKAMNVTPAVLKQIERKKEKEKIAADK- 64
Query: 110 RVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
+K+EA T+G F +K++ G+ +FG+VT DV + I+ ++++D++ + +P
Sbjct: 65 -LKQEALDFQTALSTIGRFTIKKQVGEDGVLFGTVTNGDVAEAIEEATKKEIDRRNITVP 123
Query: 170 EIRETGEYIAQLKLHPEVTARIRLNV 195
+I G + A++KLHPEV A + + V
Sbjct: 124 DIHNLGSFTAKIKLHPEVNAEVNIEV 149
>sp|B8HS22|RL9_CYAP4 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rplI PE=3 SV=1
Length = 152
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 94/146 (64%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L +DV +LG+ G L++V G+ RNYL P A + TP +LK+ + E+ + +
Sbjct: 6 QLVLNQDVYKLGRNGDLVEVAPGYARNYLLPKAMAYVATPGVLKQAERRREQERQRQLEL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
K+ A++ + E VG + G+ + +FGSVTAQDV D+I++ +++D++ + LPE+
Sbjct: 66 KQAAEKQKQVLEGVGTLTIAMPVGEKEALFGSVTAQDVADLIQSATGQEIDRRTLTLPEV 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFA 197
R+ G Y A++KLH EVTA +++ V A
Sbjct: 126 RKLGTYTAEIKLHTEVTAAVKITVVA 151
>sp|A5GPH9|RL9_SYNPW 50S ribosomal protein L9 OS=Synechococcus sp. (strain WH7803)
GN=rplI PE=3 SV=1
Length = 152
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKR- 110
+++L EDV LG+ G +++V G+ RN+L P GKA VTP ++K+++ + EAE++
Sbjct: 6 QVVLNEDVLSLGRDGDMVEVAPGYARNFLLPYGKAVPVTPAVMKQVEHRRAK-EAERQAA 64
Query: 111 VKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 170
+K+EA +T+G F VK++ G +FG+VT DV ++I+ +++VD++ + +P+
Sbjct: 65 LKQEALAFRTALDTIGRFTVKKQTGDDDVLFGTVTNGDVAEVIEEATKKEVDRRDITVPD 124
Query: 171 IRETGEYIAQLKLHPEVTARIRLNVFA 197
I TG Y +KLH EVTA I L V +
Sbjct: 125 IHRTGNYKVSVKLHSEVTAEINLEVVS 151
>sp|B1WTN1|RL9_CYAA5 50S ribosomal protein L9 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplI PE=3 SV=1
Length = 152
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 97/147 (65%), Gaps = 6/147 (4%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L E + +LGK G L++V G+ RNYL P A + TP +LK++ E+R E E++R+
Sbjct: 6 QVVLNESINKLGKDGDLVEVAPGYARNYLLPQKLATLATPGILKQV---EQRREKERQRL 62
Query: 112 ---KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
K++A+ ET+ F ++++ G+G+ IFG+VT +V + I+A ++VD+K + +
Sbjct: 63 LAEKQQAEGQKTALETIKRFTIRKEVGEGEAIFGTVTTSEVAEAIQAATNQEVDRKGITV 122
Query: 169 PEIRETGEYIAQLKLHPEVTARIRLNV 195
P+I +TG Y A +KLHPEVTA I + V
Sbjct: 123 PDINKTGFYEATVKLHPEVTATIEIQV 149
>sp|Q7V406|RL9_PROMM 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplI PE=3 SV=1
Length = 152
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L EDV LGK G L++V G+ RN+L P GKA VTP ++K++ + + +
Sbjct: 6 QVVLNEDVLSLGKDGDLVEVAPGYARNFLLPFGKAVPVTPAVMKQVGHRRAKQAEHQAAI 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
K+EA T+G F VK++ G+ +FG+VT DV + I+ ++++D++ + +PEI
Sbjct: 66 KQEALDFQTALVTIGRFTVKKQTGEDDVLFGTVTNGDVAEAIETATKKEIDRRNIIVPEI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFA 197
TG Y Q+KLH EV A I L V +
Sbjct: 126 HRTGSYKVQVKLHNEVNAEINLEVVS 151
>sp|A2CDR6|RL9_PROM3 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplI PE=3 SV=1
Length = 152
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L EDV LGK G L++V G+ RN+L P GKA VTP ++K++ + + +
Sbjct: 6 QVVLNEDVLSLGKDGDLVEVAPGYARNFLLPFGKAVPVTPAVMKQVGHRRAKQAEHQAAI 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
K+EA T+G F VK++ G+ +FG+VT DV + I+ ++++D++ + +PEI
Sbjct: 66 KQEALDFQTALVTIGRFTVKKQTGEDDVLFGTVTNGDVAEAIETATKKEIDRRNIIVPEI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFA 197
TG Y Q+KLH EV A I L V +
Sbjct: 126 HRTGSYKVQVKLHNEVNAEINLEVVS 151
>sp|Q7V9J9|RL9_PROMA 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplI PE=3 SV=1
Length = 152
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 95/150 (63%), Gaps = 6/150 (4%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKM---EEERIEAEK 108
K++LKED+ LGK G +++V G+ RN+L KA VTP +LK+++ ++ +EA K
Sbjct: 6 KVVLKEDILSLGKDGDVVEVAPGYARNFLLSQQKALAVTPSVLKQVEYRLAKKAELEAAK 65
Query: 109 KRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
K+EA +T+G F +K++ G+ +FG+VT DV + I+ Q+++D++ + +
Sbjct: 66 ---KQEAIDFETALKTIGRFSIKKQTGEDGVLFGTVTNGDVSEAIQLATQKEIDRRNIIV 122
Query: 169 PEIRETGEYIAQLKLHPEVTARIRLNVFAN 198
PEI ETG+Y Q+KLH EVTA I L V N
Sbjct: 123 PEIHETGKYKVQVKLHSEVTAEINLEVIGN 152
>sp|Q7U3Q2|RL9_SYNPX 50S ribosomal protein L9 OS=Synechococcus sp. (strain WH8102)
GN=rplI PE=3 SV=1
Length = 152
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKR- 110
+++L EDV LGK G L++V G+ RN+L P GKA VTP ++K+++ + EAE++
Sbjct: 6 QVVLNEDVLSLGKDGDLVEVAPGYARNFLLPFGKAVPVTPAVMKQVEHRRAK-EAERQAA 64
Query: 111 VKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 170
+K+ A +T+G F VK++ G+ +FG+VT DV + I+ ++++D++ + +PE
Sbjct: 65 LKQAALDFRTALDTIGRFTVKKQTGEDNVLFGTVTNGDVAEAIQDATKKEIDRRDIVVPE 124
Query: 171 IRETGEYIAQLKLHPEVTARIRLNVFA 197
I TG+Y +KLH EVTA I L V +
Sbjct: 125 IHRTGKYSVTVKLHSEVTAEINLEVVS 151
>sp|A9BDB8|RL9_PROM4 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplI PE=3 SV=1
Length = 152
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 92/146 (63%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++LKED+ LGK G +++V G+ RN+L P GKA VTP ++K+++ + + + +
Sbjct: 6 QLVLKEDILSLGKDGDVVEVAPGYARNFLLPHGKALPVTPAVMKQVEHRRAKQKEHEAAL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
K+EA +T+G F VK++ G +FG+VT D+ + I+ ++++D++ + +PE+
Sbjct: 66 KDEALAFETALKTIGRFTVKKQVGDDGVLFGTVTNGDIAEAIEKATEKEIDRRTISVPEV 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFA 197
G+Y Q+KLH EVTA I L V +
Sbjct: 126 HAIGQYKVQIKLHHEVTAEINLEVVS 151
>sp|Q2JUA5|RL9_SYNJA 50S ribosomal protein L9 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplI PE=3 SV=1
Length = 153
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L++ V LGK G+++ V+ G+ RNYL P A +TP LLKE +M E+ A K
Sbjct: 6 QVMLRQAVPGLGKPGEVVSVRPGYARNYLFPRQMAVRLTPGLLKEQQMRREQEAARKLAE 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP-E 170
K++A+ ET+G F +++K G+ +FG VTA D+ +++ A D+D++ V L E
Sbjct: 66 KQQAENYKKALETIGRFVIRKKVGEKDLLFGQVTASDIAEVVLATSGLDIDRRNVLLDEE 125
Query: 171 IRETGEYIAQLKLHPEVTARIRLNV 195
I++TG Y+ Q+KLHPEVTA +R+ V
Sbjct: 126 IKKTGVYLVQVKLHPEVTATLRIQV 150
>sp|Q3AGL2|RL9_SYNSC 50S ribosomal protein L9 OS=Synechococcus sp. (strain CC9605)
GN=rplI PE=3 SV=1
Length = 152
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKR- 110
+I+L ED+ LG G L++V G+ RN+L P GKA +TP ++K+++ + EAE++
Sbjct: 6 QIVLNEDILSLGMDGDLVEVAPGYARNFLLPFGKAVPLTPAVMKQVEHRRAK-EAERQAA 64
Query: 111 VKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 170
+K+EA T+G F VK++ G+ +FG+VT DV + I+ ++++D++ + +PE
Sbjct: 65 LKQEAVDFKTALSTIGRFTVKKQTGEDNVLFGTVTNGDVAEAIETATKKEIDRRDIVVPE 124
Query: 171 IRETGEYIAQLKLHPEVTARIRLNV 195
I TG+Y +KLH EVTA I L V
Sbjct: 125 IHRTGKYTVTVKLHSEVTAEINLEV 149
>sp|Q46IB6|RL9_PROMT 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain NATL2A)
GN=rplI PE=3 SV=1
Length = 152
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L ED+ LG G L++V GF RN+L P KA VTP +LK+++ + +AEK+
Sbjct: 6 QVVLNEDIKSLGNDGDLVEVAPGFARNFLLPNKKALPVTPTVLKQVEHRRAK-QAEKEAA 64
Query: 112 K-EEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 170
K +EA T+G F VK++ G+ +FG+VT DV +++K ++D+D++ + +PE
Sbjct: 65 KKQEAIDFQTALTTIGRFTVKKQVGEDGVLFGTVTNGDVAEVVKEATKKDIDRRDISIPE 124
Query: 171 IRETGEYIAQLKLHPEVTARIRLNV 195
I G+Y Q+KLH EV A I L V
Sbjct: 125 IHGVGKYKVQIKLHNEVNAEINLEV 149
>sp|A2C5D9|RL9_PROM1 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain NATL1A)
GN=rplI PE=3 SV=1
Length = 152
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L ED+ LG G L++V GF RN+L P KA VTP +LK+++ + +AEK+
Sbjct: 6 QVVLNEDIKSLGNDGDLVEVAPGFARNFLLPNKKALPVTPTVLKQVEHRRAK-QAEKEAA 64
Query: 112 K-EEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 170
K +EA T+G F VK++ G+ +FG+VT DV +++K ++D+D++ + +PE
Sbjct: 65 KKQEAIDFQTALTTIGRFTVKKQVGEDGVLFGTVTNGDVAEVVKEATKKDIDRRDISVPE 124
Query: 171 IRETGEYIAQLKLHPEVTARIRLNV 195
I G+Y Q+KLH EV A I L V
Sbjct: 125 IHGVGKYKVQIKLHNEVNAEINLEV 149
>sp|Q5N1S9|RL9_SYNP6 50S ribosomal protein L9 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplI PE=3 SV=1
Length = 152
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L +DV +LG+ G L++V G+ RN+L P G AQ VT +LK+++ R A
Sbjct: 6 QVVLSQDVYKLGRDGDLVEVAPGYARNFLLPQGLAQPVTRGVLKQVEFRRAREAARLVAE 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
KE A ET+G F +K++ G+G+ IFG+VT DV + I+ ++VD++ + LPEI
Sbjct: 66 KEAAVARKTALETIGRFVIKKQAGEGESIFGTVTNGDVAEAIQVATTQEVDRREITLPEI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFA 197
+ G Y Q+KLH +VTA + + V A
Sbjct: 126 HKLGFYKVQVKLHADVTAEVEIQVAA 151
>sp|Q31K30|RL9_SYNE7 50S ribosomal protein L9 OS=Synechococcus elongatus (strain PCC
7942) GN=rplI PE=3 SV=1
Length = 152
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L +DV +LG+ G L++V G+ RN+L P G AQ VT +LK+++ R A
Sbjct: 6 QVVLSQDVYKLGRDGDLVEVAPGYARNFLLPQGLAQPVTRGVLKQVEFRRAREAARLVAE 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
KE A ET+G F +K++ G+G+ IFG+VT DV + I+ ++VD++ + LPEI
Sbjct: 66 KEAAVARKTALETIGRFVIKKQAGEGESIFGTVTNGDVAEAIQVATTQEVDRREITLPEI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFA 197
+ G Y Q+KLH +VTA + + V A
Sbjct: 126 HKLGFYKVQVKLHADVTAEVEIQVAA 151
>sp|B0CAV7|RL9_ACAM1 50S ribosomal protein L9 OS=Acaryochloris marina (strain MBIC
11017) GN=rplI PE=3 SV=1
Length = 152
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKR- 110
+++L EDV +LG G L++V G+ RNYL P G A TP +LK++ E R E KR
Sbjct: 6 QLVLNEDVRKLGYSGDLVEVAPGYARNYLIPKGIAYRATPGVLKQI---EHRKAEELKRL 62
Query: 111 --VKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
+K+EA + + +T+G F++++K G+ +FG VT+ DV ++I ++DK+ +D+
Sbjct: 63 EGIKDEAAKQKVALQTIGTFRIEQKAGEEDMLFGRVTSPDVAELIANISGFEIDKRGIDI 122
Query: 169 PEIRETGEYIAQLKLHPEVTARIRLNV 195
P+IR+ G Y +KLHPEV A +++ V
Sbjct: 123 PDIRKLGTYSVDIKLHPEVIATVKVEV 149
>sp|Q2JMI4|RL9_SYNJB 50S ribosomal protein L9 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplI PE=3 SV=1
Length = 149
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L++ + LGK G++++VK G+ RNYL P A VTP +LKE ++ E+ A K
Sbjct: 2 QVVLRQAIPGLGKPGEIVNVKPGYARNYLFPRQMAVRVTPGILKEQQVRLEQEAARKLAE 61
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL-PE 170
+++A+ ET+G F +++K G+ +FG VT D+ +++ A D+D++ + L E
Sbjct: 62 RQQAENYKTALETIGRFVIRKKVGEHDLLFGQVTTSDIAEVVLATSGLDIDRRNILLNEE 121
Query: 171 IRETGEYIAQLKLHPEVTARIRLNV 195
I++TG Y Q+KLHPEVTA +R+ V
Sbjct: 122 IKKTGVYPVQVKLHPEVTATLRIQV 146
>sp|P0A499|RL9_THEEB 50S ribosomal protein L9 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplI PE=3 SV=1
Length = 152
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 87/147 (59%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L E V +LG+ GQ+++V G+ RNYL P G A+ TP L+ ++ +E+ +
Sbjct: 6 QVVLNETVNKLGRMGQVVEVAPGYARNYLFPRGIAEPATPSALRRVERLQEKERQRLAAL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
K A++ E + + G+ +FGSVT QDV D I+A +D++ + LPEI
Sbjct: 66 KSIAEKQKATLEKLATITISMPVGEKDMLFGSVTPQDVADAIQAITGETIDRREMILPEI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFAN 198
R+ G Y A++KLHPEVT ++ + V A+
Sbjct: 126 RKLGTYTAEIKLHPEVTVKLNIQVVAD 152
>sp|P0A4A0|RL9_SYNEL 50S ribosomal protein L9 OS=Synechococcus elongatus GN=rplI PE=3
SV=1
Length = 152
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 87/147 (59%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L E V +LG+ GQ+++V G+ RNYL P G A+ TP L+ ++ +E+ +
Sbjct: 6 QVVLNETVNKLGRMGQVVEVAPGYARNYLFPRGIAEPATPSALRRVERLQEKERQRLAAL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
K A++ E + + G+ +FGSVT QDV D I+A +D++ + LPEI
Sbjct: 66 KSIAEKQKATLEKLATITISMPVGEKDMLFGSVTPQDVADAIQAITGETIDRREMILPEI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFAN 198
R+ G Y A++KLHPEVT ++ + V A+
Sbjct: 126 RKLGTYTAEIKLHPEVTVKLNIQVVAD 152
>sp|Q115S4|RL9_TRIEI 50S ribosomal protein L9 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplI PE=3 SV=1
Length = 152
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 94/150 (62%)
Query: 49 KTRKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEK 108
K +++L +DV +LGK G ++DV G+ RNYL P A TP +LK+++ +E+ +
Sbjct: 3 KKLQVVLNKDVNKLGKSGDVVDVAPGYARNYLIPNKIAFRTTPGVLKQVERRQEQERQRQ 62
Query: 109 KRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
+K+ A ETVG FK+ ++ G+ IFG+VT +++V++IK +++D++ V L
Sbjct: 63 IELKQGALAQKTALETVGRFKIAKQVGENDAIFGTVTDRELVEVIKESTGQEIDRRGVTL 122
Query: 169 PEIRETGEYIAQLKLHPEVTARIRLNVFAN 198
PEI + G Y A++KLHPEV A + + V +
Sbjct: 123 PEISKIGFYKAEIKLHPEVIAEVEIQVVGH 152
>sp|Q3MGD1|RL9_ANAVT 50S ribosomal protein L9 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplI PE=3 SV=1
Length = 152
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 96/147 (65%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L +DV++LG+ G L+DV G+ RNYL P A TP +LK+++ E+ + +
Sbjct: 6 QLVLTKDVSKLGRSGDLVDVAPGYARNYLIPQSLATHATPGILKQVERRREQERQRQLEL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
+++A + E VG+ K+ ++ G+ + IFG+VT+QDV D I+A ++VD++ + +P+I
Sbjct: 66 RQQALEQKEALEKVGSLKIAKQVGENEAIFGTVTSQDVADAIQAATSQEVDRRGITIPDI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFAN 198
+ G Y A++KL +VTA+I + V A+
Sbjct: 126 GKLGTYKAEIKLFSDVTAQIDIEVVAS 152
>sp|Q8YZA0|RL9_NOSS1 50S ribosomal protein L9 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplI PE=3 SV=1
Length = 152
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 96/147 (65%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L +DV++LG+ G L+DV G+ RNYL P A TP +LK+++ E+ + +
Sbjct: 6 QLVLTKDVSKLGRSGDLVDVAPGYARNYLIPQSLATHATPGILKQVERRREQERQRQLEL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
+++A + E VG+ K+ ++ G+ + IFG+VT+QDV D I+A ++VD++ + +P+I
Sbjct: 66 RQQALEQKESLEKVGSLKIAKQVGENEAIFGTVTSQDVADAIQAATSQEVDRRGITIPDI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFAN 198
+ G Y A++KL +VTA+I + V A+
Sbjct: 126 GKLGTYKAEIKLFSDVTAQIDIEVVAS 152
>sp|Q1XDF2|RK9_PORYE 50S ribosomal protein L9, chloroplastic OS=Porphyra yezoensis
GN=rpl9 PE=3 SV=1
Length = 155
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 88/150 (58%)
Query: 47 AKKTRKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEA 106
+KK ++LKE++ +LGK ++ V +G+ RN+L P A + T +LK+ K E
Sbjct: 2 SKKVINVVLKENIQKLGKSNDVIKVASGYARNFLIPNKMAAVATNGILKQQKFYAAIREE 61
Query: 107 EKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIV 166
+ K KE A+++ + E + F V +K G G IFGSVT +++ IIK D++K+ +
Sbjct: 62 KLKTAKENAKKVKQLLEEIQRFSVSKKTGDGHNIFGSVTEKEISQIIKNTTNIDIEKQSI 121
Query: 167 DLPEIRETGEYIAQLKLHPEVTARIRLNVF 196
LP+++ G Y ++KL +VTA I+L V
Sbjct: 122 SLPDVKTIGIYDVEIKLLHQVTANIKLQVL 151
>sp|B2IVH8|RL9_NOSP7 50S ribosomal protein L9 OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=rplI PE=3 SV=1
Length = 152
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 93/147 (63%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
+++L +D+++LGK G L++V G+ RNYL P A TP +LK+++ E+ + +
Sbjct: 6 QLVLNQDISKLGKSGDLVEVAPGYARNYLIPQKLATNATPGILKQVERRREQERQRQLEL 65
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 171
+++A + E VG+ + ++ G+ + IFG++T QDV D IKA ++VD++ + +P+I
Sbjct: 66 RQQALEQKESLEKVGSLTIAKQVGENEAIFGTITTQDVADAIKAATGQEVDRRGITIPDI 125
Query: 172 RETGEYIAQLKLHPEVTARIRLNVFAN 198
G Y A++KL+ +V A++ + V A+
Sbjct: 126 NHLGTYQAEIKLYSDVAAQVDIQVVAS 152
>sp|B0JQ94|RL9_MICAN 50S ribosomal protein L9 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplI PE=3 SV=1
Length = 152
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 94/152 (61%), Gaps = 6/152 (3%)
Query: 49 KTRKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEK 108
K ++IL + V++LG+ G +++V G+ RNYL P G A + T +K+ + +E+ E+
Sbjct: 3 KRMQVILNQKVSKLGENGDVVEVAPGYARNYLIPQGVAVLATKGAIKQAEFRKEK---ER 59
Query: 109 KRV---KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKI 165
+R+ K+EA+ E + + + ++ G+ + IFG+VT+QDV +I + ++D++
Sbjct: 60 QRLLAEKQEAETRKTAIEKLSPYSIPKQVGENEAIFGTVTSQDVATVILENAKLEIDRRG 119
Query: 166 VDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 197
+ +P+I + G Y Q+KLHPEV+A I + V A
Sbjct: 120 ITVPDIGQLGVYKVQVKLHPEVSADIEIKVIA 151
>sp|Q1D289|RL9_MYXXD 50S ribosomal protein L9 OS=Myxococcus xanthus (strain DK 1622)
GN=rplI PE=3 SV=1
Length = 147
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 94/148 (63%), Gaps = 7/148 (4%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
K+IL+ED+ LGK G+L+ VK GF RN+L P KA + + L++++ E+ I A ++
Sbjct: 2 KVILREDIENLGKSGELVTVKDGFGRNFLLPRKKAVLASEQNLRQLEHEKAVIAARNAKL 61
Query: 112 KEEAQQLALIFETVGAFKV--KRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
K A++ A + +GA KV KR+ G ++FGSVTA D+ + + A+ Q +D++ + LP
Sbjct: 62 KGAAEEQA---KKIGAIKVSIKRRVGDQDKLFGSVTALDIAEAVAAEGQ-SIDRRHIHLP 117
Query: 170 E-IRETGEYIAQLKLHPEVTARIRLNVF 196
E I+ G Y +L+LH +V A+I+L V
Sbjct: 118 EPIKALGNYEVELRLHRDVIAKIKLEVL 145
>sp|Q2RM68|RL9_MOOTA 50S ribosomal protein L9 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplI PE=3 SV=1
Length = 150
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
K+IL DVA+LG +G L++V G+ RNYL P G A T LKE+ +E++R E ++ +
Sbjct: 2 KVILTADVAKLGNRGTLVEVSEGYARNYLLPRGLAVEATAGRLKELDLEKKRREKKENQE 61
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE- 170
E A++ A + K+ + G+ ++FGSVT +++ + IK Q +D++ +DL E
Sbjct: 62 LENARRQAARLDG-AVVKITTRAGETGKLFGSVTNKEIAEAIKNTFQISLDRRKIDLKEP 120
Query: 171 IRETGEYIAQLKLHPEVTARIRLNVFA 197
I+ G Y LKLHP V A +R+ V A
Sbjct: 121 IKALGSYEVTLKLHPTVQAHLRVQVVA 147
>sp|P51334|RK9_PORPU 50S ribosomal protein L9, chloroplastic OS=Porphyra purpurea
GN=rpl9 PE=3 SV=1
Length = 155
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 87/150 (58%)
Query: 47 AKKTRKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEA 106
+KK +++LKE++ +LGK ++ V G+ RN+L P A + T +L + K+ E
Sbjct: 2 SKKIIQVVLKENIQKLGKSNDVVKVATGYARNFLIPNKMASVATVGMLNQQKLYAAIKEK 61
Query: 107 EKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIV 166
+ KE A++ + E + F + +K G G+ IFGSVT +++ IIK D+DK+ +
Sbjct: 62 KIIFAKENARKTQQLLEEIQKFSISKKTGDGETIFGSVTEKEISQIIKNTTNVDIDKQNI 121
Query: 167 DLPEIRETGEYIAQLKLHPEVTARIRLNVF 196
+PEI+ G Y ++KL +VTA I+L V
Sbjct: 122 LIPEIKTIGLYNIEIKLFNQVTANIQLQVL 151
>sp|Q1GHU0|RL9_RUEST 50S ribosomal protein L9 OS=Ruegeria sp. (strain TM1040) GN=rplI
PE=3 SV=1
Length = 204
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
++IL E VA+LG+ G ++DVK GF RNYL P GKAQ + + + ++ ++EA
Sbjct: 2 QVILLERVAKLGQMGDVVDVKPGFARNYLLPQGKAQTASDANIAAFEAQKAQLEARNLET 61
Query: 112 KEEAQQLALIFETVGA--FKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP 169
K+EA+ L E +G F V R G ++GSVT +D D+ + VD+K V +
Sbjct: 62 KKEAEALG---EKLGGQQFVVIRSASDGGNLYGSVTTRDAADVATEE-GFSVDRKQVIIR 117
Query: 170 E-IRETGEYIAQLKLHPEVTARIRLNV 195
E I+ G +IA++ LHPEV I LNV
Sbjct: 118 EPIKTLGLHIAEVHLHPEVMVTIELNV 144
>sp|A3DHN0|RL9_CLOTH 50S ribosomal protein L9 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=rplI PE=3 SV=1
Length = 148
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
K+ILKEDV LGKK L++V G+ RN+L P G A T + M+ ++E + K+R
Sbjct: 2 KVILKEDVKGLGKKESLVEVSDGYARNFLIPKGLAVEATAANINIMQTKKEAEKNRKERE 61
Query: 112 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE- 170
+A++LA + + +K K G+ ++FGS+T++DV D +K Q D+DKK + LPE
Sbjct: 62 LAQAKELAEKLKGI-VVTLKAKAGENGKLFGSMTSKDVSDYLKKQHNLDIDKKKISLPES 120
Query: 171 IRETGEYIAQLKLHPEVTARIRLNV 195
++ G Y A++KL+P V+A++ + +
Sbjct: 121 MKSLGTYEAEVKLYPGVSAKLTVKI 145
>sp|B5YIM4|RL9_THEYD 50S ribosomal protein L9 OS=Thermodesulfovibrio yellowstonii
(strain ATCC 51303 / DSM 11347 / YP87) GN=rplI PE=3 SV=1
Length = 147
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 100/152 (65%), Gaps = 13/152 (8%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
K+ILKEDV LG+ GQ ++VK G+ RNYL P G A I LK ++ ++++ E + K+
Sbjct: 2 KVILKEDVHGLGRAGQTINVKDGYARNYLLPRGLALIADEKNLKVLEYQKKKFEEQAKKK 61
Query: 112 KEEAQQLALIFETVGAFK--VKRKGGKGKQIFGSVTAQDVVDIIKAQLQRD---VDKKIV 166
+++A+ +A E + A + +K K G+ +++FGS+TA+D+ ++ LQ++ VDKK +
Sbjct: 62 RQDAESIA---ERLSALELTIKAKAGEDQKLFGSITAKDIAEL----LQKEGFLVDKKQI 114
Query: 167 DLPE-IRETGEYIAQLKLHPEVTARIRLNVFA 197
++ E I+ GE+ ++KL ++A++++NV A
Sbjct: 115 NISEPIKRVGEHEVEVKLLSNLSAKLKINVVA 146
>sp|B0TA56|RL9_HELMI 50S ribosomal protein L9 OS=Heliobacterium modesticaldum (strain
ATCC 51547 / Ice1) GN=rplI PE=3 SV=1
Length = 148
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 91/151 (60%), Gaps = 10/151 (6%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
K+IL++DV LGKKG ++D+ G+ RNY+ P G A TP LK + ER++A + +
Sbjct: 2 KVILQQDVKNLGKKGDIVDIAEGYGRNYVLPRGLAIEATPANLKNL----ERLKANEAKK 57
Query: 112 KE----EAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVD 167
KE +A++L + KV+ K G+G ++FG+VT +++ + ++ Q VDK+ +
Sbjct: 58 KEQELMDAKELGAKLSGI-TVKVRSKAGEGGRLFGAVTNKEIAETVEKQFGLKVDKRKYE 116
Query: 168 LPE-IRETGEYIAQLKLHPEVTARIRLNVFA 197
L + I+ G Y +K+HP V+A +++ V +
Sbjct: 117 LKQPIKTLGHYPITVKIHPAVSAELKVEVVS 147
>sp|P27151|RL9_THETH 50S ribosomal protein L9 OS=Thermus thermophilus GN=rplI PE=1 SV=3
Length = 148
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
K+IL E + LG GQ++DVK G+ RNYL P G A + T LK + E RI A+ KR+
Sbjct: 2 KVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKAL---EARIRAQAKRL 58
Query: 112 KE---EAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
E EA++L I E + + + G+ K I+GSVTA+D+ + + Q +D K + L
Sbjct: 59 AERKAEAERLKKILENL-TLTIPVRAGETK-IYGSVTAKDIAEALSRQHGVTIDPKRLAL 116
Query: 169 PE-IRETGEYIAQLKLHPEVTARIRLNVFA 197
+ I+E GEY+ K HPEV +++++V A
Sbjct: 117 EKPIKELGEYVLTYKPHPEVPIQLKVSVVA 146
>sp|Q5SLQ1|RL9_THET8 50S ribosomal protein L9 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=rplI PE=1 SV=1
Length = 148
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 52 KIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRV 111
K+IL E + LG GQ++DVK G+ RNYL P G A + T LK + E RI A+ KR+
Sbjct: 2 KVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKAL---EARIRAQAKRL 58
Query: 112 KE---EAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL 168
E EA++L I E + + + G+ K I+GSVTA+D+ + + Q +D K + L
Sbjct: 59 AERKAEAERLKEILENL-TLTIPVRAGETK-IYGSVTAKDIAEALSRQHGVTIDPKRLAL 116
Query: 169 PE-IRETGEYIAQLKLHPEVTARIRLNVFA 197
+ I+E GEY+ K HPEV +++++V A
Sbjct: 117 EKPIKELGEYVLTYKPHPEVPIQLKVSVVA 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,896,824
Number of Sequences: 539616
Number of extensions: 2622687
Number of successful extensions: 15118
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 13358
Number of HSP's gapped (non-prelim): 895
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)