Citrus Sinensis ID: 029154

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKFAFLRQLFTAKRTKNLQ
Secondary Structure (PSIPRED)
cccccccccEEEccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHEEEcccccEEEEccccHHHEEccccccccccccEEEccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHcccccccccccc
Coil and Loop (DISEMBL)
mgkfmkednllltpdqkslkladFGLAREETVTEMMTAetgtyrwmapelysTVTLRqgekkhynnkvdVYSFGIVLWELLtnrlpfegmSNLQAAYAAAFKharpglpedispdLAFIVQScwvedpnlrpsFSQIIRMLNAFLftlrppspsvpesdtneaaatsngamTEFSARARGKFAFLRQLFTAKRTKNLQ
Flexible Loop (DISEMBL)
mgkfmkednllltpdqkslklaDFGLAREETVTEmmtaetgtyrwmaPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKFAFLRQLFTAKRTKNLQ
Low Complexity Region (SEG)
MGKFMKEDNLLLTPDQKSLKLADFGLAReetvtemmtaetgtYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKFAFLRQLFTAKRTKNLQ
Disordered region (IsUnstruct)
*******************KLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL*******************************GKFAFLRQLF*********
Disordered Region (DISOPRED)
MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR****KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF******************************************************
Disordered Region (DISEMBL)
MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP*****************GAMTEFSARARGKFAFLRQLFTAKRTKNLQ
Disordered Region (DISPRO)
MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR*************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKFAFLRQLFTAKRTKNLQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q2MHE4	390	Serine/threonine-protein	no	no	0.661	0.335	0.478	7e-31
Q55GU0	916	Probable serine/threonine	yes	no	0.651	0.140	0.413	2e-23
Q9FPR3	933	Serine/threonine-protein	no	no	0.621	0.131	0.424	7e-23
Q55A09	1331	Probable serine/threonine	no	no	0.641	0.095	0.430	7e-23
Q66HA1	850	Mitogen-activated protein	yes	no	0.661	0.154	0.394	3e-22
Q80XI6	850	Mitogen-activated protein	yes	no	0.661	0.154	0.394	3e-22
Q16584	847	Mitogen-activated protein	yes	no	0.661	0.154	0.394	4e-22
Q8VDG6	1002	Mitogen-activated protein	no	no	0.601	0.118	0.390	2e-21
Q95UN8	1161	Mitogen-activated protein	yes	no	0.636	0.108	0.391	2e-21
Q5TCX8	1036	Mitogen-activated protein	no	no	0.595	0.113	0.395	2e-21

>sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1

 Score =  133 bits (335), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 67/140 (47%), Positives = 89/140 (63%), Gaps = 9/140 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D+  +K+ADFG +  ET         GTYRWMAPE+         ++K Y
Sbjct: 213 LKSNNLLLN-DEMRVKVADFGTSCLETQCREAKGNMGTYRWMAPEMI--------KEKPY 263

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             KVDVYSFGIVLWEL T  LPF+GM+ +QAA+A A K+ RP LP    P LA +++ CW
Sbjct: 264 TRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCW 323

Query: 125 VEDPNLRPSFSQIIRMLNAF 144
            E+P+ RP FS I+ +L  +
Sbjct: 324 SENPSKRPDFSNIVAVLEKY 343

Serine/threonine kinase involved in the control of stomatal movement in response to CO(2). Shows a reduced response to ABA or light compared to CO(2).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q55GU0|Y9955_DICDI Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1

 Score =  108 bits (270), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 9/138 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL  +  ++K+ DFGL++ ++ +  MT   G+  WM+PEL        GE   Y
Sbjct: 785 IKSLNLLLD-EHMNVKICDFGLSKLKSKSTEMTKSIGSPIWMSPELL------MGED--Y 835

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             KVDVY+FGI+LWEL T  LP+ G+ ++Q A A   K  RP +P      L+ ++Q+CW
Sbjct: 836 TEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACW 895

Query: 125 VEDPNLRPSFSQIIRMLN 142
            +DP  RPSF++I+ +LN
Sbjct: 896 HQDPLKRPSFTEILNLLN 913

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FPR3|EDR1_ARATH Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1

 Score =  107 bits (266), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 9/132 (6%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAET-GTYRWMAPELYSTVTLRQGEKKHYNNKVD 69
           LL  +  ++K+ DFGL+R +  T + +  T GT  WMAPE+     LR    +  N K D
Sbjct: 798 LLVDNNWNVKVGDFGLSRLKHNTFLSSKSTAGTPEWMAPEV-----LRN---EPSNEKCD 849

Query: 70  VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPN 129
           VYSFG++LWEL T RLP+ GM+ +Q   A  F++ R  +P+++ P +  I+  CW  DPN
Sbjct: 850 VYSFGVILWELATLRLPWRGMNPMQVVGAVGFQNRRLEIPKELDPVVGRIILECWQTDPN 909

Query: 130 LRPSFSQIIRML 141
           LRPSF+Q+  +L
Sbjct: 910 LRPSFAQLTEVL 921

MAPKKK serine/threonine-protein kinase involved in the regulation of a MAP kinase cascade (probably including MPK3 and MPK6) that negatively regulates salicylic acid- (SA-) dependent defense responses, abscisic acid (ABA) signaling, and ethylene-induced senescence. Modulates also stress response (e.g. drought) signaling and cell death, in an ORE9-dependent manner. Functions at a point of cross talk between ethylene, ABA and SA signaling that impinges on senescence and cell death. In another hand, confers sensitivity to various pathogens such as the fungus Erysiphe cichoracearum, the oomycete Hyaloperonospora parasitica and the bacteria Pseudomonas syringae pv. tomato DC3000. Required for the resistance to some hemibiotrophic/necrotrophic fungal pathogens (e.g. Colletotrichum gloeosporioides, Colletotrichum higginsianum and Alternaria brassicicola) through the induction of defensins expression, probably by repressing MYC2, an inhibitor of defensin genes (PDFs). Together with KEG, may regulate endocytic trafficking and/or the formation of signaling complexes on trans-Golgi network (TGN)/ early endosome (EE) vesicles during stress responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q55A09|Y9963_DICDI Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1

 Score =  107 bits (266), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 10/137 (7%)

Query: 5    MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
            +K  NLL+     ++K+AD G+ARE + T+ MT   GT  W APE+     LR    + Y
Sbjct: 1201 LKSSNLLMD-KHFNIKIADLGIARETSFTQTMTT-IGTVAWTAPEI-----LRH---ESY 1250

Query: 65   NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
            N K DVYS+ IVL+ELLT   P++G+  + A    A K  RP LP++  P+   +V  CW
Sbjct: 1251 NQKADVYSYAIVLYELLTGEEPYQGIPPMNAGILVASKGLRPELPDNCDPNWKKLVVWCW 1310

Query: 125  VEDPNLRPSFSQIIRML 141
             EDPN RPSF +I   L
Sbjct: 1311 SEDPNKRPSFEEITNYL 1327

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q66HA1|M3K11_RAT Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus GN=Map3k11 PE=1 SV=1

 Score =  104 bits (260), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 16/147 (10%)

Query: 5   MKEDN-LLLTP------DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR 57
           +K +N LLL P      + K+LK+ DFGLARE   T  M+A  GTY WMAPE+    T  
Sbjct: 243 LKSNNILLLQPIEGDDMEHKTLKITDFGLAREWHKTTQMSA-AGTYAWMAPEVIKASTFS 301

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
           +G         DV+SFG++LWELLT  +P+ G+  L  AY  A       +P       A
Sbjct: 302 KGS--------DVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFA 353

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAF 144
            ++  CW +DP+ RP F+ I++ L A 
Sbjct: 354 QLMADCWAQDPHRRPDFASILQQLEAL 380

Activates the JUN N-terminal pathway. Required for serum-stimulated cell proliferation and for mitogen and cytokine activation of MAPK14 (p38), MAPK3 (ERK) and MAPK8 (JNK1) through phosphorylation and activation of MAP2K4/MKK4 and MAP2K7/MKK7. Plays a role in mitogen-stimulated phosphorylation and activation of BRAF, but does not phosphorylate BRAF directly. Influences microtubule organization during the cell cycle.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q80XI6|M3K11_MOUSE Mitogen-activated protein kinase kinase kinase 11 OS=Mus musculus GN=Map3k11 PE=1 SV=1

 Score =  104 bits (260), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 16/147 (10%)

Query: 5   MKEDN-LLLTP------DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR 57
           +K +N LLL P      + K+LK+ DFGLARE   T  M+A  GTY WMAPE+    T  
Sbjct: 243 LKSNNILLLQPIEGDDMEHKTLKITDFGLAREWHKTTQMSA-AGTYAWMAPEVIKASTFS 301

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
           +G         DV+SFG++LWELLT  +P+ G+  L  AY  A       +P       A
Sbjct: 302 KGS--------DVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFA 353

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAF 144
            ++  CW +DP+ RP F+ I++ L A 
Sbjct: 354 QLMADCWAQDPHRRPDFASILQQLEAL 380

Activates the JUN N-terminal pathway. Required for serum-stimulated cell proliferation and for mitogen and cytokine activation of MAPK14 (p38), MAPK3 (ERK) and MAPK8 (JNK1) through phosphorylation and activation of MAP2K4/MKK4 and MAP2K7/MKK7. Plays a role in mitogen-stimulated phosphorylation and activation of BRAF, but does not phosphorylate BRAF directly. Influences microtubule organization during the cell cycle.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q16584|M3K11_HUMAN Mitogen-activated protein kinase kinase kinase 11 OS=Homo sapiens GN=MAP3K11 PE=1 SV=1

 Score =  104 bits (259), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 16/147 (10%)

Query: 5   MKEDN-LLLTP------DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR 57
           +K +N LLL P      + K+LK+ DFGLARE   T  M+A  GTY WMAPE+    T  
Sbjct: 242 LKSNNILLLQPIESDDMEHKTLKITDFGLAREWHKTTQMSA-AGTYAWMAPEVIKASTFS 300

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
           +G         DV+SFG++LWELLT  +P+ G+  L  AY  A       +P       A
Sbjct: 301 KGS--------DVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFA 352

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAF 144
            ++  CW +DP+ RP F+ I++ L A 
Sbjct: 353 QLMADCWAQDPHRRPDFASILQQLEAL 379

Activates the JUN N-terminal pathway. Required for serum-stimulated cell proliferation and for mitogen and cytokine activation of MAPK14 (p38), MAPK3 (ERK) and MAPK8 (JNK1) through phosphorylation and activation of MAP2K4/MKK4 and MAP2K7/MKK7. Plays a role in mitogen-stimulated phosphorylation and activation of BRAF, but does not phosphorylate BRAF directly. Influences microtubule organization during the cell cycle.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q8VDG6|M3KL4_MOUSE Mitogen-activated protein kinase kinase kinase MLK4 OS=Mus musculus GN=Mlk4 PE=2 SV=2

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 9/128 (7%)

Query: 17  KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+LK+ DFGLARE   T  M+A  GTY WMAPE+  +    +G         D++S+G++
Sbjct: 267 KTLKITDFGLAREWHRTTRMSA-AGTYAWMAPEVIRSSLFSKGS--------DIWSYGVL 317

Query: 77  LWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ 136
           LWELLT  +P+ G+  L  AY  A       +P       A +++ CW +DP++RPSF+ 
Sbjct: 318 LWELLTGEVPYRGIDGLAVAYGVAVNKLTLPIPSTCPEPFAKLMKECWEQDPHIRPSFAL 377

Query: 137 IIRMLNAF 144
           I++ L A 
Sbjct: 378 ILQQLTAI 385

Activates the JUN N-terminal pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q95UN8|M3KSL_DROME Mitogen-activated protein kinase kinase kinase OS=Drosophila melanogaster GN=slpr PE=1 SV=1

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 12/138 (8%)

Query: 16  QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           QK+LK+ DFGLARE   T+ M+A  GTY WM PE+ S  T        Y+   DV+S+G+
Sbjct: 283 QKTLKITDFGLAREMYNTQRMSA-AGTYAWMPPEVISVST--------YSKFSDVWSYGV 333

Query: 76  VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           +LWEL+T   P++G   L  AY  A       +P+        +++SCW  DP+ RP F 
Sbjct: 334 LLWELITGETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFK 393

Query: 136 QIIRMLNAFL---FTLRP 150
           +I++ L +     FTL P
Sbjct: 394 EILKQLESIACSKFTLTP 411

Activates the JUN N-terminal pathway during dorsal closure.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q5TCX8|M3KL4_HUMAN Mitogen-activated protein kinase kinase kinase MLK4 OS=Homo sapiens GN=MLK4 PE=1 SV=1

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 11/129 (8%)

Query: 17  KSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K+LK+ DFGLARE    T+M TA  GTY WMAPE+  +    +G         D++S+G+
Sbjct: 283 KTLKITDFGLAREWHRTTKMSTA--GTYAWMAPEVIKSSLFSKGS--------DIWSYGV 332

Query: 76  VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           +LWELLT  +P+ G+  L  AY  A       +P       A +++ CW +DP++RPSF+
Sbjct: 333 LLWELLTGEVPYRGIDGLAVAYGVAVNKLTLPIPSTCPEPFAKLMKECWQQDPHIRPSFA 392

Query: 136 QIIRMLNAF 144
            I+  L A 
Sbjct: 393 LILEQLTAI 401

Activates the JUN N-terminal pathway.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
255584255	367	protein kinase atn1, putative [Ricinus c	0.969	0.523	0.895	3e-98
225439671	374	PREDICTED: serine/threonine-protein kina	0.979	0.518	0.830	9e-92
297735553	337	unnamed protein product [Vitis vinifera]	0.979	0.575	0.830	2e-91
224139346	356	predicted protein [Populus trichocarpa]	0.969	0.539	0.855	5e-91
356532165	370	PREDICTED: serine/threonine-protein kina	0.969	0.518	0.850	3e-89
449439809	373	PREDICTED: serine/threonine-protein kina	0.979	0.520	0.827	1e-88
449521717	373	PREDICTED: serine/threonine-protein kina	0.979	0.520	0.827	2e-88
388513773	360	unknown [Medicago truncatula]	0.949	0.522	0.821	1e-87
357506575	363	Protein kinase, putative [Medicago trunc	0.969	0.528	0.829	1e-86
297810213	337	hypothetical protein ARALYDRAFT_324798 [	0.934	0.548	0.812	1e-86

>gi|255584255|ref|XP_002532865.1| protein kinase atn1, putative [Ricinus communis] gi|223527377|gb|EEF29519.1| protein kinase atn1, putative [Ricinus communis]

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 172/192 (89%), Positives = 181/192 (94%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +QKS+KLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 175 LKPDNLLLTANQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 234

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK  RP LPED SPDLAFI+QSCW
Sbjct: 235 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKQERPSLPEDTSPDLAFIIQSCW 294

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKFAF 184
           VEDPNLRPSFSQIIRMLNAFLFTL PPS SVPES T+EAAA+SNG ++EFSARARGKFAF
Sbjct: 295 VEDPNLRPSFSQIIRMLNAFLFTLSPPSTSVPESSTHEAAASSNGTVSEFSARARGKFAF 354

Query: 185 LRQLFTAKRTKN 196
           LRQLFTAKR +N
Sbjct: 355 LRQLFTAKRARN 366

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439671|ref|XP_002270753.1| PREDICTED: serine/threonine-protein kinase HT1-like [Vitis vinifera]

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 174/195 (89%), Gaps = 1/195 (0%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +QKS+KLADFGLAREE+VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 180 LKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 239

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIV WELLTNR+PFEGMSNLQAAYAAAFK  RP LPEDISPDLAFI+QSCW
Sbjct: 240 NNKVDVYSFGIVFWELLTNRMPFEGMSNLQAAYAAAFKQERPSLPEDISPDLAFIIQSCW 299

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPS-VPESDTNEAAATSNGAMTEFSARARGKFA 183
           VEDPN+RPSFSQIIRMLN F F + PP  S + ESDTN AA +SNG MTE SAR RGKF+
Sbjct: 300 VEDPNMRPSFSQIIRMLNTFHFKVTPPPSSLLEESDTNGAAMSSNGTMTELSARTRGKFS 359

Query: 184 FLRQLFTAKRTKNLQ 198
           FLRQLF AKRT+N Q
Sbjct: 360 FLRQLFAAKRTRNSQ 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735553|emb|CBI18047.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 174/195 (89%), Gaps = 1/195 (0%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +QKS+KLADFGLAREE+VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 143 LKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 202

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIV WELLTNR+PFEGMSNLQAAYAAAFK  RP LPEDISPDLAFI+QSCW
Sbjct: 203 NNKVDVYSFGIVFWELLTNRMPFEGMSNLQAAYAAAFKQERPSLPEDISPDLAFIIQSCW 262

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPS-VPESDTNEAAATSNGAMTEFSARARGKFA 183
           VEDPN+RPSFSQIIRMLN F F + PP  S + ESDTN AA +SNG MTE SAR RGKF+
Sbjct: 263 VEDPNMRPSFSQIIRMLNTFHFKVTPPPSSLLEESDTNGAAMSSNGTMTELSARTRGKFS 322

Query: 184 FLRQLFTAKRTKNLQ 198
           FLRQLF AKRT+N Q
Sbjct: 323 FLRQLFAAKRTRNSQ 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139346|ref|XP_002323067.1| predicted protein [Populus trichocarpa] gi|222867697|gb|EEF04828.1| predicted protein [Populus trichocarpa]

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 166/194 (85%), Positives = 182/194 (93%), Gaps = 2/194 (1%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +QKS+KLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 161 LKPDNLLLTANQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 220

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RP LPED+SPDLAFI+QSCW
Sbjct: 221 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPALPEDVSPDLAFIMQSCW 280

Query: 125 VEDPNLRPSFSQIIRMLNAFLF--TLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKF 182
           VEDPNLRPSF+QIIRMLNAFLF  +   P+PS+PESDTNEAA++SNG +TEFS+R RGKF
Sbjct: 281 VEDPNLRPSFNQIIRMLNAFLFTLSPPSPTPSLPESDTNEAASSSNGTITEFSSRTRGKF 340

Query: 183 AFLRQLFTAKRTKN 196
           AFLRQLFTAK+T+N
Sbjct: 341 AFLRQLFTAKKTRN 354

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532165|ref|XP_003534644.1| PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max]

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 165/194 (85%), Positives = 177/194 (91%), Gaps = 2/194 (1%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT DQKS+KLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 177 LKPDNLLLTADQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 236

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RPG+P+DISP+LAF++QSCW
Sbjct: 237 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPGIPDDISPELAFVIQSCW 296

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTN--EAAATSNGAMTEFSARARGKF 182
           VEDPNLRPSFSQIIRMLNAFLFTL PPSP +P    N  E A TSNG +TEFSAR RGKF
Sbjct: 297 VEDPNLRPSFSQIIRMLNAFLFTLSPPSPPLPVPPDNEPEVATTSNGTITEFSARNRGKF 356

Query: 183 AFLRQLFTAKRTKN 196
            FLRQLF++KRTKN
Sbjct: 357 GFLRQLFSSKRTKN 370

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439809|ref|XP_004137678.1| PREDICTED: serine/threonine-protein kinase HT1-like [Cucumis sativus]

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 163/197 (82%), Positives = 176/197 (89%), Gaps = 3/197 (1%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +Q+S+KLADFGLAREE+VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 177 LKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 236

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RP +P DISP+LAFIVQSCW
Sbjct: 237 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDISPELAFIVQSCW 296

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTL---RPPSPSVPESDTNEAAATSNGAMTEFSARARGK 181
           VEDPN+RPSFSQIIRMLNA+LFTL      SPS P+SDT E A TSN A+TEFS+RARGK
Sbjct: 297 VEDPNMRPSFSQIIRMLNAYLFTLPPPSQSSPSSPKSDTTETATTSNSAITEFSSRARGK 356

Query: 182 FAFLRQLFTAKRTKNLQ 198
           F FLRQLF AKR KN Q
Sbjct: 357 FGFLRQLFAAKRAKNSQ 373

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521717|ref|XP_004167876.1| PREDICTED: serine/threonine-protein kinase HT1-like [Cucumis sativus]

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 163/197 (82%), Positives = 176/197 (89%), Gaps = 3/197 (1%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +Q+S+KLADFGLAREE+VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 177 LKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 236

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RP +P DISP+LAFIVQSCW
Sbjct: 237 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDISPELAFIVQSCW 296

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTL---RPPSPSVPESDTNEAAATSNGAMTEFSARARGK 181
           VEDPN+RPSFSQIIRMLNA+LFTL      SPS P+SDT E A TSN A+TEFS+RARGK
Sbjct: 297 VEDPNMRPSFSQIIRMLNAYLFTLPPPSQSSPSSPKSDTTETATTSNSAITEFSSRARGK 356

Query: 182 FAFLRQLFTAKRTKNLQ 198
           F FLRQLF AKR KN Q
Sbjct: 357 FGFLRQLFAAKRAKNSQ 373

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388513773|gb|AFK44948.1| unknown [Medicago truncatula]

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 156/190 (82%), Positives = 171/190 (90%), Gaps = 2/190 (1%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +QKS+KLADFGLAREE+VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 170 LKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 229

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RP +P+DISPDLAF++QSCW
Sbjct: 230 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPKIPDDISPDLAFVIQSCW 289

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATS--NGAMTEFSARARGKF 182
           VEDPNLRPSFSQIIRMLN FLFTL P  P +PE D    AAT+  NGA+TEFSAR +GKF
Sbjct: 290 VEDPNLRPSFSQIIRMLNEFLFTLSPLFPPLPEPDNEPKAATTSNNGAITEFSARNKGKF 349

Query: 183 AFLRQLFTAK 192
           AF RQLF++K
Sbjct: 350 AFFRQLFSSK 359

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506575|ref|XP_003623576.1| Protein kinase, putative [Medicago truncatula] gi|355498591|gb|AES79794.1| Protein kinase, putative [Medicago truncatula]

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 161/194 (82%), Positives = 176/194 (90%), Gaps = 2/194 (1%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT +QKS+KLADFGLAREE+VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 170 LKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 229

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RP +P+DISPDLAF++QSCW
Sbjct: 230 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPKIPDDISPDLAFVIQSCW 289

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATS--NGAMTEFSARARGKF 182
           VEDPNLRPSFSQIIRMLN FLFTL P SP +PE D    AAT+  NGA+TEFSAR +GKF
Sbjct: 290 VEDPNLRPSFSQIIRMLNEFLFTLSPLSPPLPEPDNEPKAATTSNNGAITEFSARNKGKF 349

Query: 183 AFLRQLFTAKRTKN 196
           AFLRQLF++KR KN
Sbjct: 350 AFLRQLFSSKRIKN 363

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810213|ref|XP_002872990.1| hypothetical protein ARALYDRAFT_324798 [Arabidopsis lyrata subsp. lyrata] gi|297318827|gb|EFH49249.1| hypothetical protein ARALYDRAFT_324798 [Arabidopsis lyrata subsp. lyrata]

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 156/192 (81%), Positives = 169/192 (88%), Gaps = 7/192 (3%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DNLLLT + KS+KLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY
Sbjct: 152 LKPDNLLLTENHKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 211

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RPG+PE ISP LAFIVQSCW
Sbjct: 212 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQQRPGMPEGISPSLAFIVQSCW 271

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKFAF 184
           VEDPN+RPSFSQIIR+LN FL TL PP    PE+DTN    T+  A+TEFS+RA+GKFAF
Sbjct: 272 VEDPNMRPSFSQIIRLLNEFLLTLTPP----PETDTNR---TNGRAITEFSSRAKGKFAF 324

Query: 185 LRQLFTAKRTKN 196
           +RQLF AKR  N
Sbjct: 325 IRQLFAAKRNIN 336

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
TAIR|locus:2180992	333	AT5G01850 [Arabidopsis thalian	0.954	0.567	0.725	5.5e-70
TAIR|locus:2091423	356	ATN1 [Arabidopsis thaliana (ta	0.737	0.410	0.639	1.1e-46
TAIR|locus:2157717	346	AT5G50180 [Arabidopsis thalian	0.767	0.439	0.607	2.7e-45
TAIR|locus:2168778	353	AT5G40540 [Arabidopsis thalian	0.722	0.405	0.638	3.4e-45
TAIR|locus:2173674	405	AT5G66710 [Arabidopsis thalian	0.838	0.409	0.464	4.6e-34
TAIR|locus:2061092	411	AT2G24360 [Arabidopsis thalian	0.656	0.316	0.446	8.2e-28
TAIR|locus:2126311	412	AT4G31170 [Arabidopsis thalian	0.656	0.315	0.446	2.2e-27
TAIR|locus:2128043	570	STY17 "serine/threonine/tyrosi	0.666	0.231	0.404	5.4e-24
TAIR|locus:2101689	377	AT3G50720 [Arabidopsis thalian	0.676	0.355	0.416	4.8e-23
TAIR|locus:2121154	575	STY46 "serine/threonine/tyrosi	0.646	0.222	0.423	1.5e-22

TAIR|locus:2180992 AT5G01850 [Arabidopsis thaliana (taxid:3702)]

 Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
 Identities = 140/193 (72%), Positives = 153/193 (79%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K DNLLLT + KS+KLADFGLAR              YRWMAPELYSTVTLRQGEKKHY
Sbjct:   143 LKPDNLLLTENHKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 202

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             NNKVDVYSFGIVLWELLTNR+PFEGMSNLQAAYAAAFK  RP +PE ISP LAFIVQSCW
Sbjct:   203 NNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPVMPEGISPSLAFIVQSCW 262

Query:   125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPS-VPESDTNEAAATSNGAMTEFSARARGKFA 183
             VEDPN+RPSFSQIIR+LN FL TL PP P  +PE+ TN    T+  A+TEFS R +GKFA
Sbjct:   263 VEDPNMRPSFSQIIRLLNEFLLTLTPPPPQPLPETATNR---TNGRAITEFSIRPKGKFA 319

Query:   184 FLRQLFTAKRTKN 196
             F+RQLF AKR  N
Sbjct:   320 FIRQLFAAKRNIN 332

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

TAIR|locus:2091423 ATN1 [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 94/147 (63%), Positives = 111/147 (75%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K +NL+L+ D K++KLADFGLAR              YRWMAPELYSTVTLRQGEKKHY
Sbjct:   151 LKPENLILSADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 210

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             N+KVD YSF IVLWEL+ N+LPFEGMSNLQAAYAAAFK+ RP   ED+  DL  IV SCW
Sbjct:   211 NHKVDAYSFAIVLWELILNKLPFEGMSNLQAAYAAAFKNLRPSA-EDLPGDLEMIVTSCW 269

Query:   125 VEDPNLRPSFSQIIRMLNAFLFTLRPP 151
              EDPN RP+F++II+ML  +L T+  P
Sbjct:   270 KEDPNERPNFTEIIQMLLRYLTTVSAP 296

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0010053 "root epidermal cell differentiation" evidence=IMP

TAIR|locus:2157717 AT5G50180 [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 93/153 (60%), Positives = 110/153 (71%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K +NLLLT D K++KLADFGLAR              YRWMAPELYSTVTLR GEKKHY
Sbjct:   145 LKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRLGEKKHY 204

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             N+KVD YSF IVLWELL N+LPFEGMSNLQAAYAAAFK+ RP   E +  +L  IV SCW
Sbjct:   205 NHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSA-ESLPEELGDIVTSCW 263

Query:   125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 157
              EDPN RP+F+ II +L  +L  +  P  ++P+
Sbjct:   264 NEDPNARPNFTHIIELLLNYLSKVGSPISAIPQ 296

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2168778 AT5G40540 [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 92/144 (63%), Positives = 109/144 (75%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K ++L+LT D K++KLADFGLAR              YRWMAPELYSTVTLR GEKKHY
Sbjct:   151 LKPESLILTADYKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHY 210

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             N+KVD YSF IVLWEL+ N+LPFEGMSNLQAAYAAAFK+ RP   +D+  DLA IV SCW
Sbjct:   211 NHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNVRPSA-DDLPKDLAMIVTSCW 269

Query:   125 VEDPNLRPSFSQIIRMLNAFLFTL 148
              EDPN RP+F++II+ML   L T+
Sbjct:   270 KEDPNDRPNFTEIIQMLLRCLSTI 293

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

TAIR|locus:2173674 AT5G66710 [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 79/170 (46%), Positives = 105/170 (61%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K  N+LLT DQK +KLADFGLAR              YRWMAPEL+S  TL  GEKKHY
Sbjct:   197 LKPSNMLLTGDQKHVKLADFGLAREETKGFMTFEAGT-YRWMAPELFSYDTLEIGEKKHY 255

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             ++KVDVYSF IV WELLTN+ PF+G +N+  AYAA+ K+ RP + E++   +  I+QSCW
Sbjct:   256 DHKVDVYSFAIVFWELLTNKTPFKGKNNIFVAYAAS-KNQRPSV-ENLPEGVVSILQSCW 313

Query:   125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE-SDTNEAAATSNGAMTE 173
              E+P+ RP F +I   L   L +L   + +    S  N A   S  ++ +
Sbjct:   314 AENPDARPEFKEITYSLTNLLRSLSSDTDATSSNSKANIATEDSTSSLVQ 363

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

TAIR|locus:2061092 AT2G24360 [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 62/139 (44%), Positives = 87/139 (62%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K DNLL++ D KS+K+ADFG+AR              YRWMAPE+         + + Y
Sbjct:   257 LKSDNLLISAD-KSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMI--------QHRAY 307

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             N KVDVYSFGIVLWEL+T  LPF+ M+ +QAA+A   +  RP +P D  P L+ I+  CW
Sbjct:   308 NQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNRGVRPTVPNDCLPVLSDIMTRCW 367

Query:   125 VEDPNLRPSFSQIIRMLNA 143
               +P +RP F +++++L A
Sbjct:   368 DANPEVRPCFVEVVKLLEA 386

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

TAIR|locus:2126311 AT4G31170 [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 62/139 (44%), Positives = 85/139 (61%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K DNLL++ D +S+K+ADFG+AR              YRWMAPE+         + + Y
Sbjct:   258 LKSDNLLISAD-RSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMI--------QHRPY 308

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
               KVDVYSFGIVLWEL+T  LPF+ M+ +QAA+A   +  RP +P D  P L  I+  CW
Sbjct:   309 TQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNRGVRPTVPADCLPVLGEIMTRCW 368

Query:   125 VEDPNLRPSFSQIIRMLNA 143
               DP +RP F++I+ +L A
Sbjct:   369 DADPEVRPCFAEIVNLLEA 387

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006914 "autophagy" evidence=RCA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

TAIR|locus:2128043 STY17 "serine/threonine/tyrosine kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 5.4e-24, P = 5.4e-24
 Identities = 57/141 (40%), Positives = 84/141 (59%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K  NLL+  + + +K+ADFG+AR              YRWMAPE+         E K Y
Sbjct:   414 LKTANLLMD-EHEVVKVADFGVARVQTESGVMTAETGTYRWMAPEVI--------EHKPY 464

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +++ DV+S+ IVLWELLT  LP+  ++ LQAA     K  RP +P++  P L  +++ CW
Sbjct:   465 DHRADVFSYAIVLWELLTGELPYSYLTPLQAAVGVVQKGLRPKIPKETHPKLTELLEKCW 524

Query:   125 VEDPNLRPSFSQIIRMLNAFL 145
              +DP LRP+F++II MLN  +
Sbjct:   525 QQDPALRPNFAEIIEMLNQLI 545

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IGI

GO:0007015 "actin filament organization" evidence=RCA

TAIR|locus:2101689 AT3G50720 [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 57/137 (41%), Positives = 76/137 (55%)

Query:     9 NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 68
             N+L+T D K +KLADFGLAR              YRWMAPE+ S   LR GEKKHY+ K+
Sbjct:   178 NVLVTGDMKHVKLADFGLAREKTLGGMTCEAGT-YRWMAPEVCSREPLRIGEKKHYDQKI 236

Query:    69 DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
             DVYSF ++ W LLTN+ PF  + ++   Y    +  RP L  +I  ++  I++ CW  D 
Sbjct:   237 DVYSFALIFWSLLTNKTPFSEIPSISIPYFVN-QGKRPSL-SNIPDEVVPILECCWAADS 294

Query:   129 NLRPSFSQIIRMLNAFL 145
               R  F  I   L + L
Sbjct:   295 KTRLEFKDITISLESLL 311

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

TAIR|locus:2121154 STY46 "serine/threonine/tyrosine kinase 46" [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 1.5e-22, P = 1.5e-22
 Identities = 58/137 (42%), Positives = 80/137 (58%)

Query:     5 MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
             +K  NLL+  + + +K+ADFG+AR              YRWMAPE+         E K Y
Sbjct:   412 LKAANLLMD-ENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVI--------EHKPY 462

Query:    65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             ++K DV+S+GIVLWELLT +LP+E M+ LQAA     K  RP +P++  P LA +++  W
Sbjct:   463 DHKADVFSYGIVLWELLTGKLPYEYMTPLQAAVGVVQKGLRPTIPKNTHPKLAELLERLW 522

Query:   125 VEDPNLRPSFSQIIRML 141
               D   RP FS+II  L
Sbjct:   523 EHDSTQRPDFSEIIEQL 539

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IGI

GO:0007015 "actin filament organization" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	198
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	9e-34
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-33
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-33
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-31
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-30
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-28
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-23
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-23
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-23
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-20
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-19
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-18
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-18
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-17
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-17
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-16
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-16
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-16
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-16
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-16
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-16
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-16
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	5e-16
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-16
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	7e-16
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-16
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-16
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-15
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-15
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-15
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-15
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-15
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-15
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	6e-15
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-15
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-15
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	9e-15
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-14
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-14
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-14
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-14
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-14
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-14
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-14
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-14
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-14
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	5e-14
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-14
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	6e-14
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	7e-14
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	8e-14
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	8e-14
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	8e-14
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	9e-14
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-13
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-13
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-13
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-13
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-13
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-13
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-13
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-13
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-13
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-13
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-13
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	3e-13
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-13
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-13
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-13
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-13
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	4e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	5e-13
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	6e-13
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-13
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	8e-13
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-12
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-12
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-12
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	1e-12
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-12
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-12
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-12
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-12
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-12
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	4e-12
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-12
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-12
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-12
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-12
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	5e-12
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	6e-12
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	7e-12
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	7e-12
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-11
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	1e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-11
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-11
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-11
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-11
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	3e-11
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-11
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-11
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	4e-11
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-11
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-11
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	5e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	6e-11
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-11
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-10
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-10
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-10
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-10
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-10
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	2e-10
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-10
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	4e-10
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	5e-10
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-10
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	6e-10
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-10
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	7e-10
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	8e-10
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-09
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-09
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-09
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-09
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-09
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-09
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-09
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	3e-09
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	4e-09
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-09
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-09
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-09
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	5e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	5e-09
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-09
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	7e-09
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	7e-09
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-08
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-08
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-08
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	1e-08
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-08
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-08
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-08
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-08
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-08
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	5e-08
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	5e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	6e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	8e-08
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-07
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-07
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-07
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-07
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-07
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-07
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	2e-07
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-07
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-07
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-07
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-07
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-07
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	4e-07
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	4e-07
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	4e-07
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-07
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	5e-07
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-07
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	7e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	7e-07
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	7e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	7e-07
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	8e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	9e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-06
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-06
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-06
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-06
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-06
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	5e-06
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	6e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	6e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-06
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	7e-06
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	8e-06
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	8e-06
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	9e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-05
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-05
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-05
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-05
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-05
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	5e-05
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	7e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	8e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	8e-05
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	1e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-04
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	3e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-04
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	4e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-04
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	5e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	6e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	6e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	6e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-04
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	7e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	7e-04
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	7e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	7e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	8e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	9e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.001
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	0.001
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.001
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	0.001
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	0.001
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.001
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	0.002
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	0.003
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.004

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  120 bits (303), Expect = 9e-34
 Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETG--TYRWMAPELYSTVTLRQGEKKHYNN 66
           N L+  +   +K++DFGL+R+    +      G    RWMAPE     +L++G+   + +
Sbjct: 132 NCLVG-ENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPE-----SLKEGK---FTS 182

Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFG++LWE+ T    P+ GMSN +          R   P +  P+L  ++  CW 
Sbjct: 183 KSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLK-NGYRLPQPPNCPPELYDLMLQCWA 241

Query: 126 EDPNLRPSFSQIIRML 141
           EDP  RP+FS+++ +L
Sbjct: 242 EDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  119 bits (302), Expect = 1e-33
 Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 13/136 (9%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETG--TYRWMAPELYSTVTLRQGEKKHYNN 66
           N L+  +   +K++DFGL+R+    +    + G    RWMAPE     +L++G+   + +
Sbjct: 133 NCLVG-ENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPE-----SLKEGK---FTS 183

Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFG++LWE+ T    P+ GMSN +       K  R   P +  P+L  ++  CW 
Sbjct: 184 KSDVWSFGVLLWEIFTLGEEPYPGMSNAEV-LEYLKKGYRLPKPPNCPPELYKLMLQCWA 242

Query: 126 EDPNLRPSFSQIIRML 141
           EDP  RP+FS+++ +L
Sbjct: 243 EDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  118 bits (298), Expect = 5e-33
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D   +KLADFGLAR+    E +T   GT  +MAPE+           K Y
Sbjct: 123 LKPENILLDED-GHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLL--------GKGY 173

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQS 122
              VD++S G++L+ELLT + PF G   L   +    K   P  P   DISP+   +++ 
Sbjct: 174 GKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRK 233

Query: 123 CWVEDPNLRPSFSQIIRM 140
             V+DP  R +  + ++ 
Sbjct: 234 LLVKDPEKRLTAEEALQH 251

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  113 bits (284), Expect = 7e-31
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 14/137 (10%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYN 65
           N L+  D   +K++DFGL+R+    +    +TG     RWMAPE     +L+ G    + 
Sbjct: 135 NCLVGED-LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPE-----SLKDG---IFT 185

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           +K DV+SFG++LWE+ T    P+ G+SN +       K  R   PE    +L  ++ SCW
Sbjct: 186 SKSDVWSFGVLLWEIFTLGATPYPGLSNEEV-LEYLRKGYRLPKPEYCPDELYELMLSCW 244

Query: 125 VEDPNLRPSFSQIIRML 141
             DP  RP+FS+++  L
Sbjct: 245 QLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  111 bits (280), Expect = 2e-30
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 14/137 (10%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYN 65
           N L+T +   +K++DFGL+R+    +      G     +WMAPE      L+ G+   + 
Sbjct: 132 NCLVT-ENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPES-----LKDGK---FT 182

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           +K DV+SFG++LWE+ T    P+ GMSN +          R   PE+   +L  ++  CW
Sbjct: 183 SKSDVWSFGVLLWEIFTLGEQPYPGMSNEEV-LELLEDGYRLPRPENCPDELYELMLQCW 241

Query: 125 VEDPNLRPSFSQIIRML 141
             DP  RP+FS+++  L
Sbjct: 242 AYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  106 bits (266), Expect = 2e-28
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 16/140 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  +   +K+ADFGLA++    +  +T   GT  +MAPE+     L  G    
Sbjct: 124 LKPENILLDENG-VVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEV-----LLGG--NG 175

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED------ISPDLA 117
           Y  KVDV+S G++L+ELLT + PF G  N+        +   P L  D       S +  
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSG-ENILDQLQLIRRILGPPLEFDEPKWSSGSEEAK 234

Query: 118 FIVQSCWVEDPNLRPSFSQI 137
            +++ C  +DP+ RP+  +I
Sbjct: 235 DLIKKCLNKDPSKRPTAEEI 254

Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 92.9 bits (232), Expect = 3e-23
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 11/137 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ LT +   +KL DFG+++   +  ++     GT  +++PEL         + K 
Sbjct: 129 IKPQNIFLTSNGL-VKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELC--------QNKP 179

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN K D++S G VL+EL T + PFEG + L+ A         P +P   S +L  +V S 
Sbjct: 180 YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP-IPSQYSSELRNLVSSL 238

Query: 124 WVEDPNLRPSFSQIIRM 140
             +DP  RPS +QI++ 
Sbjct: 239 LQKDPEERPSIAQILQS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 91.8 bits (229), Expect = 8e-23
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 13/135 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           K  N+L+  D   +KLADFG A+   +    E   +  GT  WMAPE+     +R  E  
Sbjct: 128 KGANILVDSDGV-VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEV-----IRGEE-- 179

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA-YAAAFKHARPGLPEDISPDLAFIVQ 121
            Y    D++S G  + E+ T + P+  + N  AA Y        P +PE +S +    ++
Sbjct: 180 -YGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLR 238

Query: 122 SCWVEDPNLRPSFSQ 136
            C   DP  RP+  +
Sbjct: 239 KCLRRDPKKRPTADE 253

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 90.8 bits (226), Expect = 9e-23
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 41/137 (29%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET-GTYRWMAPELYSTVTLRQGEKKHY 64
           K +N+LL  D   +KLADFGL++  T  + +     GT  +MAPE+          K +Y
Sbjct: 119 KPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLL-------GKGYY 171

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           + K D++S G++L+EL                                 P+L  +++   
Sbjct: 172 SEKSDIWSLGVILYEL---------------------------------PELKDLIRKML 198

Query: 125 VEDPNLRPSFSQIIRML 141
            +DP  RPS  +I+  L
Sbjct: 199 QKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 84.7 bits (210), Expect = 4e-20
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 15/129 (11%)

Query: 18  SLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R+   T+            RWMAPE     +L+ G    +  K DV+SFG
Sbjct: 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE-----SLKDG---VFTTKSDVWSFG 208

Query: 75  IVLWELLT-NRLPFEGMSNLQA-AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP 132
           +VLWE+ T    P++G+SN +   +     H    LPE+    L  +++ CW  +P +RP
Sbjct: 209 VVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLD--LPENCPDKLLELMRMCWQYNPKMRP 266

Query: 133 SFSQIIRML 141
           +F +I+  L
Sbjct: 267 TFLEIVSSL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 82.3 bits (204), Expect = 4e-19
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 19/140 (13%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           K DN+LL+ D  S+KLADFG A + T       +  GT  WMAPE+          +K Y
Sbjct: 143 KSDNILLSKD-GSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIK--------RKDY 193

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP-----EDISPDLAFI 119
             KVD++S GI+  E+     P+     L+A +    K    G+P     E  SP+    
Sbjct: 194 GPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK----GIPPLKNPEKWSPEFKDF 249

Query: 120 VQSCWVEDPNLRPSFSQIIR 139
           +  C V+DP  RPS  ++++
Sbjct: 250 LNKCLVKDPEKRPSAEELLQ 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 79.8 bits (197), Expect = 2e-18
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 21/140 (15%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGT----YRWMAPELYSTVTLRQGEKKHYNNK 67
           L  +   LK++DFG++REE    + T   G      +W APE      L  G    Y ++
Sbjct: 125 LVGENNVLKISDFGMSREEE-GGIYTVSDGLKQIPIKWTAPE-----ALNYGR---YTSE 175

Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQA--AYAAAFKHARPGL-PEDISPDLAFIVQSC 123
            DV+S+GI+LWE  +    P+ GMSN Q      + ++   P L PE+I      ++  C
Sbjct: 176 SDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYR----LMLQC 231

Query: 124 WVEDPNLRPSFSQIIRMLNA 143
           W  DP  RPSFS+I   L  
Sbjct: 232 WAYDPENRPSFSEIYNELQI 251

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 79.8 bits (197), Expect = 2e-18
 Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 18/136 (13%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYNNKV 68
           L  +   +K++DFGLAR   + +  T+  GT    +W  PE++            +++K 
Sbjct: 132 LVGEDNVVKVSDFGLARY-VLDDQYTSSQGTKFPVKWAPPEVFD--------YSRFSSKS 182

Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           DV+SFG+++WE+ +  ++P+E  SN +     +A ++  RP L      ++  I+ SCW 
Sbjct: 183 DVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKL---APTEVYTIMYSCWH 239

Query: 126 EDPNLRPSFSQIIRML 141
           E P  RP+F +++  L
Sbjct: 240 EKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 76.6 bits (189), Expect = 3e-17
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 25/136 (18%)

Query: 20  KLADFGLAREETVTEMMTAETGTY---------RWMAPELYSTVTLRQGEKKHYNNKVDV 70
           K++DFGL+R    +E       TY         RW APE    +  R      + +  DV
Sbjct: 146 KVSDFGLSRRLEDSE------ATYTTKGGKIPIRWTAPE---AIAYR-----KFTSASDV 191

Query: 71  YSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPN 129
           +SFGIV+WE+++    P+  MSN Q    A     R   P D    L  ++  CW +D N
Sbjct: 192 WSFGIVMWEVMSYGERPYWDMSN-QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRN 250

Query: 130 LRPSFSQIIRMLNAFL 145
            RP+FSQI+  L+  +
Sbjct: 251 ERPTFSQIVSTLDKMI 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 75.7 bits (187), Expect = 7e-17
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 17/138 (12%)

Query: 6   KEDNLLLTPDQKSLKLADFGLA-REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           K  N+L T D   +KLADFG+A +   V++   +  GT  WMAPE    V    G     
Sbjct: 126 KAANILTTKDG-VVKLADFGVATKLNDVSKDDASVVGTPYWMAPE----VIEMSG----A 176

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA---RPGLPEDISPDLAFIVQ 121
           +   D++S G  + ELLT   P+    +L    AA F+      P LPE ISP+L   + 
Sbjct: 177 STASDIWSLGCTVIELLTGNPPY---YDLNPM-AALFRIVQDDHPPLPEGISPELKDFLM 232

Query: 122 SCWVEDPNLRPSFSQIIR 139
            C+ +DPNLRP+  Q+++
Sbjct: 233 QCFQKDPNLRPTAKQLLK 250

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 17/141 (12%)

Query: 6   KEDNLLLTPDQKSLKLADFG----LAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGE 60
           K  N+ L      +KL DFG    L    T   E + +  GT  +MAPE+        G+
Sbjct: 126 KPANIFLD-HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI-----TGGK 179

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN-LQAAYAAAFKHARPGLPE--DISPD-L 116
            K +    D++S G V+ E+ T + P+  + N  Q  +     H +P +P+   +SP+  
Sbjct: 180 GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGH-KPPIPDSLQLSPEGK 238

Query: 117 AFIVQSCWVEDPNLRPSFSQI 137
            F+ + C   DP  RP+ S++
Sbjct: 239 DFLDR-CLESDPKKRPTASEL 258

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 75.4 bits (186), Expect = 1e-16
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+ L     ++KL DFGLA+     +   A+T  GT  +M+PE  +           
Sbjct: 137 KPANIFLD-ANNNVKLGDFGLAKILG-HDSSFAKTYVGTPYYMSPEQLN--------HMS 186

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y+ K D++S G +++EL     PF   + LQ A        R  +P   S +L  +++S 
Sbjct: 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR-IPYRYSSELNEVIKSM 245

Query: 124 WVEDPNLRPSFSQIIRM 140
              DP+ RPS  +++++
Sbjct: 246 LNVDPDKRPSTEELLQL 262

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 75.6 bits (186), Expect = 1e-16
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 9/99 (9%)

Query: 44  RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFK 102
           RW+APE      +++ +   ++ K DV+SFG+++WE+ T   LPF G+S+ +        
Sbjct: 183 RWLAPE-----AVQEDD---FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG 234

Query: 103 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 141
                +PE     L  ++  CW  +P  RPSFS+++  L
Sbjct: 235 KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 75.1 bits (185), Expect = 1e-16
 Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 17/139 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNN 66
           N+L++ +    K++DFGLA+E +  +    ++G    +W APE      LR   +K ++ 
Sbjct: 132 NVLVS-EDLVAKVSDFGLAKEASQGQ----DSGKLPVKWTAPE-----ALR---EKKFST 178

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+LWE+ +  R+P+  +  L+       K  R   PE   P++  +++ CW 
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWE 237

Query: 126 EDPNLRPSFSQIIRMLNAF 144
            DP  RP+F Q+   L   
Sbjct: 238 LDPAKRPTFKQLREQLALI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 74.5 bits (184), Expect = 2e-16
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 14/130 (10%)

Query: 4   FMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEK 61
            +K +N+LL      +KL DFGLA+E   +E     T  GT  ++APE    V L +G  
Sbjct: 118 DLKPENILLD-ADGHIKLTDFGLAKEL-SSEGSRTNTFCGTPEYLAPE----VLLGKG-- 169

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
             Y   VD +S G++L+E+LT + PF    + +  Y           PE +SP+   ++ 
Sbjct: 170 --YGKAVDWWSLGVLLYEMLTGKPPFYA-EDRKEIY-EKILKDPLRFPEFLSPEARDLIS 225

Query: 122 SCWVEDPNLR 131
               +DP  R
Sbjct: 226 GLLQKDPTKR 235

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 15/135 (11%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+LL  +    KLADFG++  +    M    T  GT  WMAPE    V    G    
Sbjct: 126 KAGNILLNEE-GQAKLADFGVS-GQLTDTMAKRNTVIGTPFWMAPE----VIQEIG---- 175

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           YNNK D++S GI   E+   + P+  +  ++A +    K   P L  PE  SP+    V+
Sbjct: 176 YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPP-PTLSDPEKWSPEFNDFVK 234

Query: 122 SCWVEDPNLRPSFSQ 136
            C V+DP  RPS  Q
Sbjct: 235 KCLVKDPEERPSAIQ 249

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 74.4 bits (183), Expect = 3e-16
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV 68
           N+L+  +   +KLADFG+A++        +  G+  WMAPE    V  +QG    Y    
Sbjct: 132 NILVDTN-GVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPE----VIAQQGG---YGLAA 183

Query: 69  DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR----PGLPEDISPDLAFIVQSCW 124
           D++S G  + E+ T + P+   S L+   AA FK  R    P +P+ +S +    +  C 
Sbjct: 184 DIWSLGCTVLEMATGKPPW---SQLEG-VAAVFKIGRSKELPPIPDHLSDEAKDFILKCL 239

Query: 125 VEDPNLRPSFSQIIR 139
             DP+LRP+ ++++ 
Sbjct: 240 QRDPSLRPTAAELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 73.6 bits (181), Expect = 5e-16
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 18/130 (13%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKHYN 65
           +L  +    K+ADFGLAR     ++  A  G     +W APE  LY+  ++         
Sbjct: 134 VLVGENNICKVADFGLARV-IKEDIYEAREGAKFPIKWTAPEAALYNRFSI--------- 183

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
            K DV+SFGI+L E++T  R+P+ GM+N +        +  P  P     +L  I+  CW
Sbjct: 184 -KSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP-CPPGCPKELYDIMLDCW 241

Query: 125 VEDPNLRPSF 134
            EDP+ RP+F
Sbjct: 242 KEDPDDRPTF 251

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 74.8 bits (182), Expect = 5e-16
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)

Query: 6   KEDNLLLTPDQKSLKLADFGLARE-------ETVTEMMTAETGTYRWMAPELYSTVTLRQ 58
           K +N+LL  D + +KL DFGLA+         ++  + +   GT  +MAPE+     L  
Sbjct: 128 KPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV-----LLG 182

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAF 118
               + ++  D++S GI L+ELLT   PFEG  N   A +   K         ++  L+ 
Sbjct: 183 LSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS-ATSQTLKIILELPTPSLASPLSP 241

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESD 159
                      +  + S +++ L A     R  S S    D
Sbjct: 242 SNP------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHD 276

Length = 384

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 73.1 bits (179), Expect = 7e-16
 Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 18/141 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYR-----WMAPELYSTVTLRQGEKKH 63
           N L+T ++  LK++DFG++REE   + + A TG  +     W APE      L  G    
Sbjct: 124 NCLVT-EKNVLKISDFGMSREEE--DGVYASTGGMKQIPVKWTAPE-----ALNYGR--- 172

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           Y+++ DV+SFGI+LWE  +   +P+  +SN Q   A   +  R   PE     +  +++ 
Sbjct: 173 YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLPCPELCPDAVYRLMER 231

Query: 123 CWVEDPNLRPSFSQIIRMLNA 143
           CW  DP  RPSFS + + L +
Sbjct: 232 CWEYDPGQRPSFSTVHQELQS 252

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 73.0 bits (180), Expect = 7e-16
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 12/133 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K  N+LLT D + +KL DFGL+ + + T+      GT  WMAPE+ +         K Y+
Sbjct: 125 KAANILLTSDGE-VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVIN--------GKPYD 175

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSC 123
            K D++S GI   EL   + P+  +  ++A +  A     PGL  PE  S +    ++ C
Sbjct: 176 YKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP-PGLRNPEKWSDEFKDFLKKC 234

Query: 124 WVEDPNLRPSFSQ 136
             ++P  RP+  Q
Sbjct: 235 LQKNPEKRPTAEQ 247

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 73.2 bits (180), Expect = 7e-16
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 15/140 (10%)

Query: 10  LLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP    +K+ DFGLA+  +   +   AE G    +WMA E     ++       Y +
Sbjct: 141 LVKTPQH--VKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALE-----SILHRI---YTH 190

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+S+G+ +WEL+T    P+EG+           K  R   P   + D+  ++  CW+
Sbjct: 191 KSDVWSYGVTVWELMTFGAKPYEGI-PAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWM 249

Query: 126 EDPNLRPSFSQIIRMLNAFL 145
            D   RP+F ++I   +   
Sbjct: 250 IDAESRPTFKELINEFSKMA 269

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 71.8 bits (176), Expect = 2e-15
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 21/135 (15%)

Query: 17  KSLKLADFGLAREETVTEMMTAETG---TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           + +K+ DFGLAR+   ++    E       RWMAPE     +L  G+   +  + DV+SF
Sbjct: 148 RVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPE-----SLLDGK---FTTQSDVWSF 199

Query: 74  GIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDP 128
           G+++WE+LT  + P+  ++N +       +H   G     PE+    +  ++ +CW +DP
Sbjct: 200 GVLMWEILTLGQQPYPALNNQEV-----LQHVTAGGRLQKPENCPDKIYQLMTNCWAQDP 254

Query: 129 NLRPSFSQIIRMLNA 143
           + RP+F +I  +L  
Sbjct: 255 SERPTFDRIQEILQN 269

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 71.8 bits (176), Expect = 2e-15
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 12/125 (9%)

Query: 19  LKLADFGLA-REETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           +KL DFG + R +T+      M + TGT  WM+PE+ S      GE   Y  K DV+S G
Sbjct: 143 VKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS------GEG--YGRKADVWSVG 194

Query: 75  IVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
             + E+LT + P+     + A +  A +   P LP  +SPD    ++  +VE+   RPS 
Sbjct: 195 CTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSA 254

Query: 135 SQIIR 139
            +++R
Sbjct: 255 EELLR 259

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 72.2 bits (177), Expect = 3e-15
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 19/144 (13%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKH 63
           N+LL+ +   +K+ DFGLAR+    +      G  R    WMAPE ++  V         
Sbjct: 203 NILLS-ENNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPESIFDKV--------- 251

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQ 121
           Y  + DV+SFG++LWE+ +    P+ G+  +   +    K   R   PE  +P++  I+ 
Sbjct: 252 YTTQSDVWSFGVLLWEIFSLGASPYPGV-QIDEEFCRRLKEGTRMRAPEYATPEIYSIML 310

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFL 145
            CW  +P  RP+FS+++ +L   L
Sbjct: 311 DCWHNNPEDRPTFSELVEILGDLL 334

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 71.4 bits (175), Expect = 3e-15
 Identities = 38/143 (26%), Positives = 77/143 (53%), Gaps = 16/143 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREE----TVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           +K DNLL+  D    K++DFG++++        + M+ + G+  WMAPE+  +       
Sbjct: 134 LKADNLLVDAD-GICKISDFGISKKSDDIYDNDQNMSMQ-GSVFWMAPEVIHS------Y 185

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFI- 119
            + Y+ KVD++S G V+ E+   R P+     + A +    K + P +P D+S +L+ + 
Sbjct: 186 SQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVA 245

Query: 120 ---VQSCWVEDPNLRPSFSQIIR 139
              + +C+  +P+ RP+  ++++
Sbjct: 246 LDFLNACFTINPDNRPTARELLQ 268

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 71.3 bits (175), Expect = 4e-15
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 15/129 (11%)

Query: 20  KLADFGLAR--EETVTEMMTAETGT-YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ADFGLAR  +E V   ++++    Y+W APE  S           ++ K DV+SFGI+
Sbjct: 144 KVADFGLARLIKEDV--YLSSDKKIPYKWTAPEAAS--------HGTFSTKSDVWSFGIL 193

Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           L+E+ T  ++P+ GM+N    Y       R   P     ++  I+  CW  +P  RPSF 
Sbjct: 194 LYEMFTYGQVPYPGMNN-HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFK 252

Query: 136 QIIRMLNAF 144
            +   L+  
Sbjct: 253 ALREELDNI 261

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 70.8 bits (174), Expect = 5e-15
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 18/139 (12%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKHYNN 66
           L  +    K+ADFGLAR     E  TA  G     +W APE   Y   T+          
Sbjct: 135 LVGENLVCKIADFGLARLIEDDEY-TAREGAKFPIKWTAPEAANYGRFTI---------- 183

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L E++T  R+P+ GM+N +        +  P  P +   +L  ++  CW 
Sbjct: 184 KSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP-RPPNCPEELYDLMLQCWD 242

Query: 126 EDPNLRPSFSQIIRMLNAF 144
           +DP  RP+F  +   L  +
Sbjct: 243 KDPEERPTFEYLQSFLEDY 261

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 70.9 bits (174), Expect = 6e-15
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 24/146 (16%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETG---TYRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR+    +     T      +WMAPE L+  V         Y
Sbjct: 162 NVLVTEDH-VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV---------Y 211

Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFI 119
            ++ DV+SFG++LWE+ T    P+ G+          FK  + G     P++ + +L  +
Sbjct: 212 THQSDVWSFGVLLWEIFTLGGSPYPGI-----PVEELFKLLKEGYRMEKPQNCTQELYHL 266

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++ CW E P+ RP+F Q++  L+  L
Sbjct: 267 MRDCWHEVPSQRPTFKQLVEDLDRML 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 70.4 bits (173), Expect = 6e-15
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 12/133 (9%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D++  + + DF +A + T   + T+ +GT  +MAPE+           + 
Sbjct: 126 IKPDNILL--DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCR--------QG 175

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSN-LQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           Y+  VD +S G+  +E L  + P+ G S  ++    A  + A    P   S +    +  
Sbjct: 176 YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINK 235

Query: 123 CWVEDPNLRPSFS 135
               DP  R   +
Sbjct: 236 LLERDPQKRLGDN 248

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 70.7 bits (173), Expect = 6e-15
 Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 16/135 (11%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L      +K++DFG+ R     E  ++    +  +W  PE+++           Y++K D
Sbjct: 132 LVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF--------SKYSSKSD 183

Query: 70  VYSFGIVLWELLTN-RLPFEGMSNLQA--AYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
           V+SFG+++WE+ T  ++PFE  SN +     +  F+  RP L    S  +  ++ SCW E
Sbjct: 184 VWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLA---SMTVYEVMYSCWHE 240

Query: 127 DPNLRPSFSQIIRML 141
            P  RP+F++++R +
Sbjct: 241 KPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 70.1 bits (172), Expect = 9e-15
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 3   KFMKED----NLLLTPDQKSLKLADFGLAREETV-TEMMTAETG---TYRWMAPEL--YS 52
            F+  D    N+LL  ++   K++DFG++R     ++   A T      +W APE   Y 
Sbjct: 115 HFVHRDLAARNVLLV-NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYG 173

Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPED 111
                      +++K DV+S+G+ LWE  +    P+  M   +   A      R   PE+
Sbjct: 174 K----------FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI-AMLESGERLPRPEE 222

Query: 112 ISPDLAFIVQSCWVEDPNLRPSFSQIIRML 141
              ++  I+ SCW   P  RP+FS++    
Sbjct: 223 CPQEIYSIMLSCWKYRPEDRPTFSELESTF 252

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 69.6 bits (170), Expect = 1e-14
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 28/143 (19%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGTY----------RWMAPELYSTVTLRQGEK 61
           L  +   LK++DFG++R+E        + G Y          +W APE      L  G  
Sbjct: 125 LVGENNVLKISDFGMSRQE--------DDGIYSSSGLKQIPIKWTAPE-----ALNYGR- 170

Query: 62  KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
             Y+++ DV+S+GI+LWE  +    P+ GM+N QA      K  R   P+    D+  ++
Sbjct: 171 --YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE-KGYRMSCPQKCPDDVYKVM 227

Query: 121 QSCWVEDPNLRPSFSQIIRMLNA 143
           Q CW   P  RP FS++ + L A
Sbjct: 228 QRCWDYKPENRPKFSELQKELAA 250

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 69.6 bits (170), Expect = 1e-14
 Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 10/136 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ L+ +    KL DFG+AR+     E+     GT  +++PE+         + + 
Sbjct: 127 IKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEIC--------QNRP 178

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YNNK D++S G VL+EL T + PFEG +  Q        +  P  P + S DL  ++   
Sbjct: 179 YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISP-NFSRDLRSLISQL 237

Query: 124 WVEDPNLRPSFSQIIR 139
           +   P  RPS + I++
Sbjct: 238 FKVSPRDRPSITSILK 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 69.6 bits (170), Expect = 1e-14
 Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 18/136 (13%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYNNKV 68
           L  + + +K++DFG+ R   + +  T+ TGT    +W +PE++S           Y++K 
Sbjct: 132 LVGENQVVKVSDFGMTRF-VLDDQYTSSTGTKFPVKWSSPEVFSF--------SKYSSKS 182

Query: 69  DVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           DV+SFG+++WE+ +  + P+E  SN +      A F+  +P L    S  +  ++Q CW 
Sbjct: 183 DVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRL---ASQSVYELMQHCWK 239

Query: 126 EDPNLRPSFSQIIRML 141
           E P  RPSFS ++  L
Sbjct: 240 ERPEDRPSFSLLLHQL 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 69.8 bits (171), Expect = 2e-14
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 21/141 (14%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT   K +K+ DFGLAR+         +       +WMAPE +++ V         Y
Sbjct: 171 NVLLT-HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV---------Y 220

Query: 65  NNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
             + DV+S+GI+LWE+ +    P+ GM   S         ++ A+P   E    ++  I+
Sbjct: 221 TFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQP---EHAPAEIYDIM 277

Query: 121 QSCWVEDPNLRPSFSQIIRML 141
           ++CW  DP  RP+F QI++++
Sbjct: 278 KTCWDADPLKRPTFKQIVQLI 298

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 69.1 bits (169), Expect = 2e-14
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 14/140 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFG----LAREETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           +K DN+L+      +K++DFG    LA     TE  T   GT ++MAPE+     + +G 
Sbjct: 134 IKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT---GTLQYMAPEV-----IDKGP 185

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA-YAAAFKHARPGLPEDISPDLAFI 119
           +  Y    D++S G  + E+ T + PF  +   QAA +        P +PE +S +    
Sbjct: 186 RG-YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNF 244

Query: 120 VQSCWVEDPNLRPSFSQIIR 139
           +  C+  DP+ R S   +++
Sbjct: 245 ILRCFEPDPDKRASAHDLLQ 264

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 69.2 bits (169), Expect = 3e-14
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 38/159 (23%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGTYR----------WMAPELYSTVTLRQGEK 61
           +     ++K+ DFG+ R+         ET  YR          WMAPE     +L+ G  
Sbjct: 151 MVAHDFTVKIGDFGMTRD-------IYETDYYRKGGKGLLPVRWMAPE-----SLKDGVF 198

Query: 62  KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDL 116
              +   D++SFG+VLWE+ +    P++G+SN Q       K    G     P++    +
Sbjct: 199 TTSS---DMWSFGVVLWEITSLAEQPYQGLSNEQV-----LKFVMDGGYLDQPDNCPERV 250

Query: 117 AFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSV 155
             +++ CW  +P +RP+F +I+ +L      L P  P V
Sbjct: 251 TDLMRMCWQFNPKMRPTFLEIVNLLKD---DLHPSFPEV 286

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 69.0 bits (169), Expect = 3e-14
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 11/138 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+L+T     +KL DFG+A      +   +   GT  WMAPE+ +       E K+
Sbjct: 127 IKAANILVTNTGN-VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVIT-------EGKY 178

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED-ISPDLAFIVQS 122
           Y+ K D++S GI ++E+ T   P+  +   +A      K   P L ++  S  L   V +
Sbjct: 179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP-KSKPPRLEDNGYSKLLREFVAA 237

Query: 123 CWVEDPNLRPSFSQIIRM 140
           C  E+P  R S  ++++ 
Sbjct: 238 CLDEEPKERLSAEELLKS 255

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 68.3 bits (167), Expect = 4e-14
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 28/145 (19%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR     E    E   +  +W APE   Y T T+          
Sbjct: 133 ILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI---------- 182

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSN------LQAAYAAAFKHARPGLPEDISPDLAFI 119
           K DV+SFGI+L E++T  R+P+ GM+N      L+  Y       R   P++   +L  +
Sbjct: 183 KSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY-------RMPRPDNCPEELYEL 235

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAF 144
           ++ CW E P  RP+F  +  +L  F
Sbjct: 236 MRLCWKEKPEERPTFEYLRSVLEDF 260

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 69.2 bits (169), Expect = 4e-14
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 17/139 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKH 63
           N+LLT  + + K+ DFGLAR+    +      G  R    WMAPE +++ V         
Sbjct: 244 NILLTHGRIT-KICDFGLARDIR-NDSNYVVKGNARLPVKWMAPESIFNCV--------- 292

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           Y  + DV+S+GI+LWE+ +    P+ GM      Y    +  R   PE    ++  I++S
Sbjct: 293 YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKS 352

Query: 123 CWVEDPNLRPSFSQIIRML 141
           CW  DP  RP+F QI++++
Sbjct: 353 CWDADPLKRPTFKQIVQLI 371

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 68.0 bits (166), Expect = 5e-14
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 17/143 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-------ETVTEMMTAETGTYRWMAPELYSTVTLR 57
           +K +N++L P+   +KL DFG AR         T + M+ +  GT  WMAPE+ +     
Sbjct: 128 IKGNNVMLMPN-GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN----- 181

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA-AAFKHARPGLPEDISPDL 116
              +  Y  K D++S G  ++E+ T + P   M  L A +   A +   P LP+  S   
Sbjct: 182 ---ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAA 238

Query: 117 AFIVQSCWVEDPNLRPSFSQIIR 139
              V SC   D + RPS  Q++R
Sbjct: 239 IDFVTSCLTRDQHERPSALQLLR 261

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 68.9 bits (168), Expect = 5e-14
 Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 22/144 (15%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPE-----LYSTVTLRQGEKK 62
           +L  + K +K+ DFGLAR+        ++  T+   +WMAPE     LY+T++       
Sbjct: 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLS------- 322

Query: 63  HYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
                 DV+SFGI+LWE+ T    P+  +   +  Y A  +  R   P   S ++  I+Q
Sbjct: 323 ------DVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQ 376

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFL 145
            CW E   +RP FSQ++ ++   L
Sbjct: 377 KCWEEKFEIRPDFSQLVHLVGDLL 400

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 68.0 bits (166), Expect = 5e-14
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 16/133 (12%)

Query: 20  KLADFGLAR---EETVTEMMTAETG---TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           K++DFGL+R   ++T     T+  G     RW APE    +  R+     + +  DV+S+
Sbjct: 146 KVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPE---AIAYRK-----FTSASDVWSY 197

Query: 74  GIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP 132
           GIV+WE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP
Sbjct: 198 GIVMWEVMSYGERPYWDMSN-QDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARP 256

Query: 133 SFSQIIRMLNAFL 145
            F QI+  L+  +
Sbjct: 257 KFGQIVSTLDKMI 269

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 68.1 bits (166), Expect = 6e-14
 Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 19/142 (13%)

Query: 11  LLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPE-LYSTVTLRQGEKKHYNN 66
           +L  + + +K++DFGL+R   EE      +      +WMA E L+  +         Y  
Sbjct: 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI---------YTT 208

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMS--NLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           + DV+SFG++LWE++T    P+ G++   L       ++  RP   E+ S ++  ++ +C
Sbjct: 209 QSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERP---ENCSEEMYNLMLTC 265

Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W ++P+ RP+F+ I + L   +
Sbjct: 266 WKQEPDKRPTFADISKELEKMM 287

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 68.1 bits (166), Expect = 7e-14
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 13/138 (9%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYNNK 67
           +L  +Q  +K++D GL+RE    +    +  +    RWM PE      +  G+   +++ 
Sbjct: 155 ILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPE-----AIMYGK---FSSD 206

Query: 68  VDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            D++SFG+VLWE+ +  L P+ G SN +       +   P   ED  P +  ++  CW E
Sbjct: 207 SDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLP-CSEDCPPRMYSLMTECWQE 265

Query: 127 DPNLRPSFSQIIRMLNAF 144
            P+ RP F  I   L ++
Sbjct: 266 GPSRRPRFKDIHTRLRSW 283

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 67.4 bits (165), Expect = 8e-14
 Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 26/144 (18%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYR----------WMAPELYSTVTLRQ 58
           N+LL  D K +K+ DFGL R     E        Y           W APE   T T   
Sbjct: 127 NILLASDDK-VKIGDFGLMRALPQNEDH------YVMEEHLKVPFAWCAPESLRTRT--- 176

Query: 59  GEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
                +++  DV+ FG+ LWE+ T    P+ G+S  Q       +  R   PE    D+ 
Sbjct: 177 -----FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIY 231

Query: 118 FIVQSCWVEDPNLRPSFSQIIRML 141
            ++  CW  +P  RP+F+ +   L
Sbjct: 232 NVMLQCWAHNPADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 67.5 bits (165), Expect = 8e-14
 Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 13/137 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  N+ LT D  ++KL DFG+AR    TV E+     GT  +++PE+         E +
Sbjct: 127 IKSQNIFLTKD-GTIKLGDFGIARVLNSTV-ELARTCIGTPYYLSPEIC--------ENR 176

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            YNNK D+++ G VL+E+ T +  FE   N++       + + P +    S DL  +V  
Sbjct: 177 PYNNKSDIWALGCVLYEMCTLKHAFEA-GNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQ 235

Query: 123 CWVEDPNLRPSFSQIIR 139
            +  +P  RPS + I+ 
Sbjct: 236 LFKRNPRDRPSVNSILE 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 67.5 bits (165), Expect = 8e-14
 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L     ++K+ D G+A+     T       GT  +++PEL         E K 
Sbjct: 127 IKSLNLFLDAYD-NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELC--------EDKP 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN K DV++ G+VL+E  T + PF+  +N  A      +   P + +  S  LA ++  C
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDA-NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQC 236

Query: 124 WVEDPNLRPSFSQIIR 139
             +D   RP   Q++R
Sbjct: 237 LTKDYRQRPDTFQLLR 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 67.2 bits (164), Expect = 9e-14
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL   +  +K+ DFG+++  +         GT  +++PEL         E K Y
Sbjct: 127 LKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELC--------EGKPY 178

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           N K D+++ G VL+EL + +  FE  +NL A            + +  SPDL  ++ S  
Sbjct: 179 NQKSDIWALGCVLYELASLKRAFEA-ANLPALVLKIMSGTFAPISDRYSPDLRQLILSML 237

Query: 125 VEDPNLRPSFSQII 138
             DP+ RP  SQI+
Sbjct: 238 NLDPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 67.2 bits (164), Expect = 1e-13
 Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 24/135 (17%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGT--------YRWMAPELYSTVTLRQGEKKH 63
           L  +   +K+ADFGL+R      +MT +T T         +W APE  +           
Sbjct: 136 LVGENHLVKVADFGLSR------LMTGDTYTAHAGAKFPIKWTAPESLAYNK-------- 181

Query: 64  YNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           ++ K DV++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE   P +  ++++
Sbjct: 182 FSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKGYRMERPEGCPPKVYELMRA 240

Query: 123 CWVEDPNLRPSFSQI 137
           CW  +P+ RPSF++I
Sbjct: 241 CWQWNPSDRPSFAEI 255

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LLT +  ++KLADFG A   ++     +  GT  WMAPE    V L   E   Y
Sbjct: 141 IKAGNILLT-EPGTVKLADFGSA---SLVSPANSFVGTPYWMAPE----VILAMDEG-QY 191

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQSC 123
           + KVDV+S GI   EL   + P   M+ + A Y  A ++  P L   D S      V SC
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNDSPTLSSNDWSDYFRNFVDSC 250

Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTLRPPS 152
             + P  RPS  ++++  + F+   RPP+
Sbjct: 251 LQKIPQDRPSSEELLK--HRFVLRERPPT 277

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 67.3 bits (165), Expect = 1e-13
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 14/137 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLARE--ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           K  N+LL+ ++  +KLADFG++ +   T+++  T   GT  WMAPE+     ++Q     
Sbjct: 125 KAANILLS-EEGDVKLADFGVSGQLTSTMSKRNTF-VGTPFWMAPEV-----IKQSG--- 174

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED-ISPDLAFIVQS 122
           Y+ K D++S GI   EL     P   +  ++  +    K+  P L  +  S      V  
Sbjct: 175 YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP-KNNPPSLEGNKFSKPFKDFVSL 233

Query: 123 CWVEDPNLRPSFSQIIR 139
           C  +DP  RPS  ++++
Sbjct: 234 CLNKDPKERPSAKELLK 250

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 67.1 bits (164), Expect = 1e-13
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           M + +K  N+L+   +  +KL DFG++  E +  +     GT  +M+PE        QG 
Sbjct: 126 MHRDIKPSNILVN-SRGQIKLCDFGVS-GELINSIADTFVGTSTYMSPERI------QGG 177

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPF---EGMSNLQAAYAAAF-------KHARPGLP- 109
           K  Y  K DV+S GI + EL   + PF       + Q              +   P LP 
Sbjct: 178 K--YTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS 235

Query: 110 EDISPDLAFIVQSCWVEDPNLRPSFSQIIRM 140
            D   DL   V +C ++DP  RP+  Q+  M
Sbjct: 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 67.6 bits (165), Expect = 2e-13
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 23/146 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKH 63
           N+LLT D +  K+ DFGLAR+  + +      G  R    WMAPE ++  V         
Sbjct: 242 NVLLT-DGRVAKICDFGLARD-IMNDSNYVVKGNARLPVKWMAPESIFDCV--------- 290

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGM---SNLQAAYAAAFKHARPGLPEDISPDLAFI 119
           Y  + DV+S+GI+LWE+ +  + P+ G+   S         ++ +RP       P++  I
Sbjct: 291 YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFA---PPEIYSI 347

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++ CW  +P  RP+FSQI +++   L
Sbjct: 348 MKMCWNLEPTERPTFSQISQLIQRQL 373

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 66.8 bits (163), Expect = 2e-13
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 18/133 (13%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKHYNN 66
           L  DQ  +K++DFGL+R   + +  T+  G+    RW  PE  LYS           +++
Sbjct: 132 LVDDQGCVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLLYSK----------FSS 180

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV++FG+++WE+ +  ++P+E  +N +     +    R   P   S  +  I+ SCW 
Sbjct: 181 KSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL-RLYRPHLASEKVYAIMYSCWH 239

Query: 126 EDPNLRPSFSQII 138
           E    RP+F Q++
Sbjct: 240 EKAEERPTFQQLL 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 67.1 bits (164), Expect = 2e-13
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K  N+L+      +KL DFG++     +   T + G   +MAPE  +     +  +K Y+
Sbjct: 131 KPSNVLIN-RNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINP----ELNQKGYD 185

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED-ISPDLAFIVQSCW 124
            K DV+S GI + EL T R P++             +   P LP +  SP+    V  C 
Sbjct: 186 VKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCL 245

Query: 125 VEDPNLRPSFSQIIRM 140
            ++   RP++ ++++ 
Sbjct: 246 KKNYKERPNYPELLQH 261

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 2e-13
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 10/139 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K  N+LLT D   +KLADFG++ +   + +   +T  GT  WMAPE+ +  T +     
Sbjct: 129 LKAGNILLTLD-GDVKLADFGVSAKNK-STLQKRDTFIGTPYWMAPEVVACETFKD---N 183

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIV 120
            Y+ K D++S GI L EL     P   ++ ++       K   P L  P   S      +
Sbjct: 184 PYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL-KSEPPTLDQPSKWSSSFNDFL 242

Query: 121 QSCWVEDPNLRPSFSQIIR 139
           +SC V+DP+ RP+ +++++
Sbjct: 243 KSCLVKDPDDRPTAAELLK 261

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 27/161 (16%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE---TGTYRWMAPELYSTVTLRQGEK 61
           +K D++LLT D + +KL+DFG   +  V++ +       GT  WMAPE+ S        +
Sbjct: 141 IKSDSILLTSDGR-VKLSDFGFCAQ--VSKEVPRRKSLVGTPYWMAPEVIS--------R 189

Query: 62  KHYNNKVDVYSFGIVLWELLT------NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPD 115
             Y  +VD++S GI++ E++       N  P + M  ++       K+        +SP 
Sbjct: 190 LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKN-----LHKVSPR 244

Query: 116 LAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
           L   +    V DP  R + ++++   + FL    PPS  VP
Sbjct: 245 LRSFLDRMLVRDPAQRATAAELLN--HPFLAKAGPPSSIVP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 66.7 bits (163), Expect = 2e-13
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D   +K+ADFG+ +E    E   +   GT  ++APE+       +G+K  
Sbjct: 122 LKLDNVLLDKDGH-IKIADFGMCKENMNGEGKASTFCGTPDYIAPEIL------KGQK-- 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN  VD +SFG++L+E+L  + PF G    +     +  + RP  P  IS +    +   
Sbjct: 173 YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFD--SILNDRPHFPRWISKEAKDCLSKL 230

Query: 124 WVEDPNLR 131
           +  DP  R
Sbjct: 231 FERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 66.2 bits (161), Expect = 3e-13
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 16/139 (11%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR     E    E   +  +W APE   + + T+          
Sbjct: 134 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI---------- 183

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L+E++T  ++P+ GMSN     A    +  P   E+   +L  I+++CW 
Sbjct: 184 KSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMP-RMENCPDELYDIMKTCWK 242

Query: 126 EDPNLRPSFSQIIRMLNAF 144
           E    RP+F  +  +L+ F
Sbjct: 243 EKAEERPTFDYLQSVLDDF 261

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 67.0 bits (163), Expect = 3e-13
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 16/142 (11%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETG---TYRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR+    +     T      +WMAPE L+  V         Y
Sbjct: 164 NVLVTEDN-VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 213

Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  I++ C
Sbjct: 214 THQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTHELYMIMREC 272

Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 273 WHAVPSQRPTFKQLVEDLDRVL 294

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 65.7 bits (160), Expect = 3e-13
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 17/136 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNN 66
           N+L++ D  + K++DFGLAR       M  +      +W APE      L+  +   +++
Sbjct: 130 NILVSEDGVA-KVSDFGLAR----VGSMGVDNSKLPVKWTAPE-----ALKHKK---FSS 176

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+S+G++LWE+ +  R P+  MS L+       K  R   PE    D+  ++ SCW 
Sbjct: 177 KSDVWSYGVLLWEVFSYGRAPYPKMS-LKEVKECVEKGYRMEPPEGCPADVYVLMTSCWE 235

Query: 126 EDPNLRPSFSQIIRML 141
            +P  RPSF ++   L
Sbjct: 236 TEPKKRPSFHKLREKL 251

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 65.9 bits (161), Expect = 3e-13
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 14/136 (10%)

Query: 10  LLLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNNK 67
           L+ +PD   +KL DFGL+R         A  G    +WMAPE   ++  R+     + + 
Sbjct: 139 LVSSPD--CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPE---SINFRR-----FTSA 188

Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            DV+ FG+ +WE+L     PF+G+ N            R  +P +  P L  ++  CW  
Sbjct: 189 SDVWMFGVCMWEILMLGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAY 247

Query: 127 DPNLRPSFSQIIRMLN 142
           DP+ RP F+++   L+
Sbjct: 248 DPSKRPRFTELKAQLS 263

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 23/141 (16%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR-QGEKKHY 64
           K  N+L+   +  +KL DFG++ +  V  +     GT  +MAPE       R QG    Y
Sbjct: 128 KPSNILVN-SRGQIKLCDFGVSGQ-LVNSLAKTFVGTSSYMAPE-------RIQGN--DY 176

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF-------KHARPGLPEDI-SPDL 116
           + K D++S G+ L EL T R P+             F           P LP    SPD 
Sbjct: 177 SVKSDIWSLGLSLIELATGRFPY---PPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDF 233

Query: 117 AFIVQSCWVEDPNLRPSFSQI 137
              V  C ++DP  RPS+ ++
Sbjct: 234 QDFVNLCLIKDPRERPSYKEL 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 66.0 bits (161), Expect = 3e-13
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 25/133 (18%)

Query: 19  LKLADFGLAREETVTEMMTAETGTY---RWMAPE--LYSTVTLRQGEKKHYNNKVDVYSF 73
           +K+ADFGL+R     +   A        RWM PE   Y+           Y  + DV+++
Sbjct: 169 VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN----------RYTTESDVWAY 218

Query: 74  GIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDP 128
           G+VLWE+ +  + P+ GM++ +  Y     + R G     P++   +L  +++ CW + P
Sbjct: 219 GVVLWEIFSYGMQPYYGMAHEEVIY-----YVRDGNVLSCPDNCPLELYNLMRLCWSKLP 273

Query: 129 NLRPSFSQIIRML 141
           + RPSF+ I R+L
Sbjct: 274 SDRPSFASINRIL 286

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 65.5 bits (160), Expect = 4e-13
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K  N+ LT     +KL DFG+++    +E   AET  GT  +M+PEL       QG K 
Sbjct: 127 IKTLNIFLTKAG-LIKLGDFGISKILG-SEYSMAETVVGTPYYMSPELC------QGVK- 177

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            YN K D+++ G VL+ELLT +  F+  +N         +     +    S +L  +V S
Sbjct: 178 -YNFKSDIWALGCVLYELLTLKRTFDA-TNPLNLVVKIVQGNYTPVVSVYSSELISLVHS 235

Query: 123 CWVEDPNLRPSFSQIIRML 141
              +DP  RP+  +++   
Sbjct: 236 LLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 65.6 bits (160), Expect = 5e-13
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 11/131 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   + L DFGL++E    E   A +  GT  +MAPE+     +R G   
Sbjct: 131 IKLENILLDSE-GHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEV-----IRGGSGG 184

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           H +  VD +S G++ +ELLT   PF  +G  N Q+  +     ++P  P+ +S +    +
Sbjct: 185 H-DKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFI 243

Query: 121 QSCWVEDPNLR 131
           Q    +DP  R
Sbjct: 244 QKLLEKDPKKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 65.8 bits (160), Expect = 6e-13
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 19/144 (13%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKH 63
           N+LL+ +   +K+ DFGLAR+    +      G+ R    WMAPE ++  V         
Sbjct: 204 NILLS-ENNVVKICDFGLARD-IYKDPDYVRKGSARLPLKWMAPESIFDKV--------- 252

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQ 121
           Y  + DV+SFG++LWE+ +    P+ G+  +   +    K   R   PE+ +P++  I+ 
Sbjct: 253 YTTQSDVWSFGVLLWEIFSLGASPYPGV-QINEEFCQRLKDGTRMRAPENATPEIYRIML 311

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFL 145
           +CW  DP  RP+FS ++ +L   L
Sbjct: 312 ACWQGDPKERPTFSALVEILGDLL 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 66.0 bits (161), Expect = 7e-13
 Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 13/145 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K  N+LL  +   +KL DFG ++    T   ++     GT  ++APE++         +
Sbjct: 169 IKSANILLCSN-GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIW--------RR 219

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
           K Y+ K D++S G++L+ELLT + PF+G  N++             LP  ISP++  IV 
Sbjct: 220 KPYSKKADMFSLGVLLYELLTLKRPFDG-ENMEEVMHKTLAGRYDPLPPSISPEMQEIVT 278

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLF 146
           +    DP  RPS S+++ M    LF
Sbjct: 279 ALLSSDPKRRPSSSKLLNMPICKLF 303

Length = 496

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 64.6 bits (157), Expect = 8e-13
 Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 18/130 (13%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKHYN 65
           +L  D    K+ADFGLAR     E  TA  G     +W APE  LY   T+         
Sbjct: 133 ILVGDGLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTI--------- 182

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
            K DV+SFGI+L EL+T  R+P+ GM+N +        +  P  P+D    L  ++  CW
Sbjct: 183 -KSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP-CPQDCPISLHELMLQCW 240

Query: 125 VEDPNLRPSF 134
            +DP  RP+F
Sbjct: 241 KKDPEERPTF 250

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 64.8 bits (158), Expect = 1e-12
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 25/134 (18%)

Query: 20  KLADFGLAREETVTEMMTAETGTY---RWMAPE--LYSTVTLRQGEKKHYNNKVDVYSFG 74
           K+ DFG++R+   T+       T    RWM PE  +Y   T             DV+SFG
Sbjct: 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTES----------DVWSFG 211

Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIVQSCWVEDPN 129
           +VLWE+ T  + P+ G+SN +       +    G     P     ++  I+  CW  DP 
Sbjct: 212 VVLWEIFTYGKQPWYGLSNEE-----VIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQ 266

Query: 130 LRPSFSQIIRMLNA 143
            R +   I   L  
Sbjct: 267 QRINIKDIHERLQK 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 64.6 bits (157), Expect = 1e-12
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 18/131 (13%)

Query: 20  KLADFGLAREETVTEMMTAETGTYRWMAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVL 77
           K+ADFGL+R + V    T      RWMA E   YS           Y    DV+S+G++L
Sbjct: 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV----------YTTNSDVWSYGVLL 213

Query: 78  WELLT-NRLPFEGMS--NLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           WE+++    P+ GM+   L       ++  +P   +D   DL   ++ CW E P  RPSF
Sbjct: 214 WEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDL---MRQCWREKPYERPSF 270

Query: 135 SQIIRMLNAFL 145
           +QI+  LN  L
Sbjct: 271 AQILVSLNRML 281

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 64.6 bits (157), Expect = 1e-12
 Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 11/131 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE--ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   + L DFGL++E  E   E   +  GT  +MAP++     +R G+  
Sbjct: 131 IKLENILLDSNGHVV-LTDFGLSKEFHEDEVERAYSFCGTIEYMAPDI-----VRGGDGG 184

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           H +  VD +S G++++ELLT   PF  +G  N QA  +     + P  P+++S     I+
Sbjct: 185 H-DKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDII 243

Query: 121 QSCWVEDPNLR 131
           Q   ++DP  R
Sbjct: 244 QRLLMKDPKKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 64.4 bits (157), Expect = 1e-12
 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 18/106 (16%)

Query: 44  RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ-AAY-AAA 100
           +WMA E     +L     K Y++  DV+SFG++LWEL+T  + P+  +   + AAY    
Sbjct: 184 KWMALE-----SL---VNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG 235

Query: 101 FKHARPGLPEDIS-PDLAFIVQS-CWVEDPNLRPSFSQIIRMLNAF 144
           ++ A+P     I+ PD  F V + CW  DP  RPSFSQ+++ L  F
Sbjct: 236 YRLAQP-----INCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 64.3 bits (156), Expect = 2e-12
 Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 16/142 (11%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETG---TYRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR+    +     T      +WMAPE L+  +         Y
Sbjct: 170 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 219

Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 220 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 278

Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 279 WHAVPSQRPTFKQLVEDLDRIL 300

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 63.5 bits (154), Expect = 2e-12
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 17/132 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNN 66
           N+L++ D  + K++DFGL +E + T+    +TG    +W APE      LR+   K ++ 
Sbjct: 132 NVLVSEDNVA-KVSDFGLTKEASSTQ----DTGKLPVKWTAPE-----ALRE---KKFST 178

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+LWE+ +  R+P+  +  L+       K  +   P+   P +  +++ CW 
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWH 237

Query: 126 EDPNLRPSFSQI 137
            D   RPSF Q+
Sbjct: 238 LDAATRPSFLQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 63.7 bits (155), Expect = 2e-12
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 11/138 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +  +N++L  D K + + DFGLA+++     +T+  GT  +  PE+       + E   Y
Sbjct: 140 LTPNNIMLGEDDK-VTITDFGLAKQKQPESKLTSVVGTILYSCPEIV------KNEP--Y 190

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQSC 123
             K DV++FG +L+++ T + PF   + L  A         P LPE + S D+  ++ SC
Sbjct: 191 GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP-LPEGMYSEDVTDVITSC 249

Query: 124 WVEDPNLRPSFSQIIRML 141
              D   RP   Q+  M+
Sbjct: 250 LTPDAEARPDIIQVSAMI 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 63.5 bits (154), Expect = 3e-12
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 23/130 (17%)

Query: 18  SLKLADFGLAREETVTEMMTAETG-----TYRWMAPELYSTVTLRQGEKKHYNNKVDVYS 72
           ++K+ DFG+ R+  + E      G       RWM+PE     +L+ G    +    DV+S
Sbjct: 157 TVKIGDFGMTRD--IYETDYYRKGGKGLLPVRWMSPE-----SLKDGV---FTTYSDVWS 206

Query: 73  FGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDP 128
           FG+VLWE+ T    P++GMSN Q            GL +  D  PD+ F +++ CW  +P
Sbjct: 207 FGVVLWEIATLAEQPYQGMSNEQVLRFVM----EGGLLDKPDNCPDMLFELMRMCWQYNP 262

Query: 129 NLRPSFSQII 138
            +RPSF +II
Sbjct: 263 KMRPSFLEII 272

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 23/147 (15%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAET---GTYRWMAPELYSTVTLRQG 59
           +K  N+LL  D  S+K+ADFG++    +             GT  WMAPE+         
Sbjct: 128 IKAGNILLGED-GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME------- 179

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDL- 116
           +   Y+ K D++SFGI   EL T   P+   S            ++  P L         
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGAAPY---SKYPPMKVLMLTLQNDPPSLETGADYKKY 236

Query: 117 --AF--IVQSCWVEDPNLRPSFSQIIR 139
             +F  ++  C  +DP+ RP+  ++++
Sbjct: 237 SKSFRKMISLCLQKDPSKRPTAEELLK 263

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 63.1 bits (153), Expect = 4e-12
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ LT     +K+ D G+AR  E   +M +   GT  +M+PEL+S         K 
Sbjct: 128 LKTQNVFLT-RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN--------KP 178

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN K DV++ G  ++E+ T +  F    ++ +      +   P +P+D SP+L  ++ + 
Sbjct: 179 YNYKSDVWALGCCVYEMATLKHAFNA-KDMNSLVYRIIEGKLPPMPKDYSPELGELIATM 237

Query: 124 WVEDPNLRPSFSQIIR 139
             + P  RPS   I+R
Sbjct: 238 LSKRPEKRPSVKSILR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 63.1 bits (153), Expect = 4e-12
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 18/140 (12%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPEL--YSTVTLRQGEKKHYNNKV 68
           +L  +  + K+ADFGL+R E V    T      RWMA E   YS           Y  K 
Sbjct: 150 VLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSV----------YTTKS 199

Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+SFG++LWE+++    P+ GM+  +  Y    +  R   P +   ++  +++ CW + 
Sbjct: 200 DVWSFGVLLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDR 258

Query: 128 PNLRPSFSQII----RMLNA 143
           P  RP F+QI     RML A
Sbjct: 259 PYERPPFAQISVQLSRMLEA 278

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 63.0 bits (153), Expect = 4e-12
 Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 18/137 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-----TGTYRWMAPELYSTVTLRQG 59
           +K  NLL+    + L++ADFG A           E      GT  +MAPE+     LR G
Sbjct: 129 VKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV-----LR-G 182

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR----PGLPEDISPD 115
           E+  Y    DV+S G V+ E+ T + P+          A  FK A     P +PE +SP 
Sbjct: 183 EQ--YGRSCDVWSVGCVIIEMATAKPPW-NAEKHSNHLALIFKIASATTAPSIPEHLSPG 239

Query: 116 LAFIVQSCWVEDPNLRP 132
           L  +   C    P  RP
Sbjct: 240 LRDVTLRCLELQPEDRP 256

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 62.8 bits (152), Expect = 4e-12
 Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 16/139 (11%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  D    K+ADFGLAR     E    +   +  +W APE  LY   T+          
Sbjct: 133 ILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 182

Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL+T  R+P+ GM N +        +  P  P+     L  +++ CW 
Sbjct: 183 KSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMP-CPQGCPESLHELMKLCWK 241

Query: 126 EDPNLRPSFSQIIRMLNAF 144
           +DP+ RP+F  I   L  +
Sbjct: 242 KDPDERPTFEYIQSFLEDY 260

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 62.6 bits (153), Expect = 4e-12
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 21/142 (14%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLR-QGEKK 62
           K  NLL+      +K+ADFG+++  E T+ +  T   GT  +M+PE       R QGE  
Sbjct: 127 KPSNLLINSKG-EVKIADFGISKVLENTLDQCNTFV-GTVTYMSPE-------RIQGE-- 175

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH----ARPGLPED-ISPDLA 117
            Y+   D++S G+ L E    + PF      Q ++    +       P LP +  SP+  
Sbjct: 176 SYSYAADIWSLGLTLLECALGKFPFL--PPGQPSFFELMQAICDGPPPSLPAEEFSPEFR 233

Query: 118 FIVQSCWVEDPNLRPSFSQIIR 139
             + +C  +DP  RPS +++++
Sbjct: 234 DFISACLQKDPKKRPSAAELLQ 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 63.5 bits (154), Expect = 5e-12
 Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 13/141 (9%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLR 57
           M + +K  N+ L P    +KL DFG +++ + +   ++ ++  GT  ++APEL+      
Sbjct: 191 MHRDLKSANIFLMP-TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELW------ 243

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
             E+K Y+ K D++S G++L+ELLT   PF+G S  +      +    P  P  +S  + 
Sbjct: 244 --ERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP-FPCPVSSGMK 300

Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++     ++P LRP+  Q++
Sbjct: 301 ALLDPLLSKNPALRPTTQQLL 321

Length = 478

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 62.7 bits (152), Expect = 6e-12
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 24/146 (16%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETG---TYRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR     +     +      +WMAPE L+  V         Y
Sbjct: 164 NVLVTEDN-VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRV---------Y 213

Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFI 119
            ++ DV+SFGI++WE+ T    P+ G+          FK  R G     P + + +L  +
Sbjct: 214 THQSDVWSFGILMWEIFTLGGSPYPGIP-----VEELFKLLREGHRMDKPSNCTHELYML 268

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++ CW   P  RP+F Q++  L+  L
Sbjct: 269 MRECWHAVPTQRPTFKQLVEALDKVL 294

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 62.7 bits (152), Expect = 7e-12
 Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 16/142 (11%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETG---TYRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR+    +     T      +WMAPE L+  V         Y
Sbjct: 167 NVLVT-ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 216

Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 217 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 275

Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 276 WHAIPSHRPTFKQLVEDLDRIL 297

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 62.1 bits (151), Expect = 7e-12
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLAREETVTEMMTAETGT-----YRWMAPELYS 52
           KF+  D    N +L  D+  ++K+ADFGLAR+    E  +    T      +WMA E   
Sbjct: 118 KFVHRDLAARNCML--DESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQ 175

Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T          +  K DV+SFG++LWEL+T   P     +         +  R   PE  
Sbjct: 176 TQK--------FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYC 227

Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++ SCW   P +RP+FS+++  +     T
Sbjct: 228 PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFST 262

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 61.8 bits (150), Expect = 1e-11
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 14/131 (10%)

Query: 20  KLADFGLAR--EETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL+R  E+      T   G    RW APE    +  R+     + +  DV+S+GI
Sbjct: 146 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE---AIAYRK-----FTSASDVWSYGI 197

Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           V+WE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP F
Sbjct: 198 VMWEVMSYGERPYWEMSN-QDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKF 256

Query: 135 SQIIRMLNAFL 145
            QI+ +L+  +
Sbjct: 257 EQIVSILDKLI 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 62.3 bits (151), Expect = 1e-11
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 23/146 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPE-----LYSTVTLRQGE 60
           N+LL    K +K+ DFGLAR+        ++  T+   +WMAPE     LY+T++     
Sbjct: 267 NVLLA-QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLS----- 320

Query: 61  KKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFI 119
                   DV+S+GI+LWE+ +    P+ GM      Y       R   P+  + ++  I
Sbjct: 321 --------DVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDI 372

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFL 145
           +  CW  +P  RPSF  +  ++ + L
Sbjct: 373 MVKCWNSEPEKRPSFLHLSDIVESLL 398

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 62.0 bits (150), Expect = 1e-11
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 23/159 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGL-AREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+         +  GT  WMAPEL S +         
Sbjct: 142 IKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP-------- 192

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     L+     A K  R  LP        +SP L 
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPKLKNLHKVSPSLK 247

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V DP  R + +++++  + FL    PPS  VP
Sbjct: 248 GFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPSCIVP 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 17/132 (12%)

Query: 12  LTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPE--LYSTVTLRQGEKKHYNN 66
           L  +  ++K++DFGL+R+    +   + +      RWM PE  LY   T           
Sbjct: 156 LVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTES-------- 207

Query: 67  KVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
             D++SFG+VLWE+ +  L P+ G SN +       +   P  PED    +  ++  CW 
Sbjct: 208 --DIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPC-PEDCPARVYALMIECWN 264

Query: 126 EDPNLRPSFSQI 137
           E P  RP F  I
Sbjct: 265 EIPARRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 61.3 bits (149), Expect = 1e-11
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 14/130 (10%)

Query: 10  LLLTPDQKSLKLADFGLAREETVTEMMT-AETGTYRWMAPELYSTVTLRQGEKKHYNNKV 68
           LL+  D   +K+ D G+++   + + M   + GT  +MAPE++          + Y+ K 
Sbjct: 135 LLVANDL--VKIGDLGISK--VLKKNMAKTQIGTPHYMAPEVWK--------GRPYSYKS 182

Query: 69  DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           D++S G +L+E+ T   PFE  S +Q       +   P +P   S DL   ++S     P
Sbjct: 183 DIWSLGCLLYEMATFAPPFEARS-MQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKP 241

Query: 129 NLRPSFSQII 138
            LRP+  +I+
Sbjct: 242 KLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 61.2 bits (148), Expect = 1e-11
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPEL--YSTVTLRQGEKKHYNNKV 68
           +L  +    K+ADFGL+R + V    T      RWMA E   YS           Y    
Sbjct: 143 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV----------YTTNS 192

Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+S+G++LWE+++    P+ GM+  +  Y    +  R   P +   ++  +++ CW E 
Sbjct: 193 DVWSYGVLLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 251

Query: 128 PNLRPSFSQIIRMLNAFL 145
           P  RPSF+QI+  LN  L
Sbjct: 252 PYERPSFAQILVSLNRML 269

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 60.4 bits (146), Expect = 3e-11
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 11  LLTPDQKSLKLADFGLAR--EETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNN 66
           +L       K++DFGL+R  E+      T   G    RW APE  +         + + +
Sbjct: 138 ILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY--------RKFTS 189

Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
             DV+SFGIV+WE+++    P+  MSN      A     R   P D    +  ++  CW 
Sbjct: 190 ASDVWSFGIVMWEVMSFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQ 248

Query: 126 EDPNLRPSFSQIIRMLNAFL 145
           +D   RP F  I+ +L+  L
Sbjct: 249 QDRARRPRFVDIVNLLDKLL 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 60.3 bits (146), Expect = 3e-11
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 12/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ L      LK+ DFG++R    + ++ T  TGT  +M+PE        QG    
Sbjct: 132 LKAKNIFLK--NNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALK----HQG---- 181

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S G +L+E+      FEG  N  +      +   P LPE  S  L  I+QS 
Sbjct: 182 YDSKSDIWSLGCILYEMCCLAHAFEG-QNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSM 240

Query: 124 WVEDPNLRPSFSQIIR 139
             +DP+LRPS ++I+R
Sbjct: 241 LNKDPSLRPSAAEILR 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 15/148 (10%)

Query: 3   KFMKEDNLLLTPDQK----------SLKLADFGLAREETVTEMMTAETGTYRWMAPELYS 52
           KF+KE++ ++  D K           +KL DFG++    V  +     G   +MAPE   
Sbjct: 116 KFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS-GNLVASLAKTNIGCQSYMAPERIK 174

Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPE 110
           +    Q     Y  + DV+S G+ + E+   R P+  E  +N+ A  +A      P LP 
Sbjct: 175 SGGPNQ--NPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPS 232

Query: 111 DISPDLAFIVQSCWVEDPNLRPSFSQII 138
             S D    V  C  + PN RP+++Q++
Sbjct: 233 GYSDDAQDFVAKCLNKIPNRRPTYAQLL 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 39/166 (23%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWM-APELYSTVTLRQGEKK 62
           +K +NLL+  +   LKLADFGLAR   +     T    T RW  APEL   +  +     
Sbjct: 124 LKPENLLINTEG-VLKLADFGLARSFGSPVRPYTHYVVT-RWYRAPEL--LLGDKG---- 175

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEG------------------------MSNLQAAYA 98
            Y+  VD++S G +  ELL+ R  F G                         ++L   Y 
Sbjct: 176 -YSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234

Query: 99  AAFKH-ARPGLPE---DISPDLAFIVQSCWVEDPNLRPSFSQIIRM 140
            +F   A   LP+   + SP    ++      DP+ R +  Q +  
Sbjct: 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 60.4 bits (146), Expect = 4e-11
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 19/144 (13%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKH 63
           N+LL+ +   +K+ DFGLAR+    +      G  R    WMAPE ++  V         
Sbjct: 209 NILLS-ENNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRV--------- 257

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQ 121
           Y  + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   + 
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 316

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFL 145
            CW  +P+ RP+FS+++  L   L
Sbjct: 317 DCWHGEPSQRPTFSELVEHLGNLL 340

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 59.9 bits (145), Expect = 5e-11
 Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 20/143 (13%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTYR--------WMAPELYSTVTLRQGEKK 62
           +L  ++  +K++DFG++++     + T  T   R        WMAPE+         ++ 
Sbjct: 137 ILVDNKGGIKISDFGISKKLEANSLSTK-TNGARPSLQGSVFWMAPEVV--------KQT 187

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y  K D++S G ++ E+LT + PF   + LQA +    ++A P +P +IS +    ++ 
Sbjct: 188 SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG-ENASPEIPSNISSEAIDFLEK 246

Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
            +  D N RP+ +++  + + FL
Sbjct: 247 TFEIDHNKRPTAAEL--LKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 59.9 bits (146), Expect = 5e-11
 Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 42/167 (25%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWM-APELYSTVTLRQGEK 61
           +K +NLL++  +  +K+ADFGLARE  +      T    T RW  APE    + LR    
Sbjct: 125 LKPENLLVSGPE-VVKIADFGLARE--IRSRPPYTDYVST-RWYRAPE----ILLRST-- 174

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL--------------QAAYAAAFKHAR-- 105
             Y++ VD+++ G ++ EL T R  F G S +              +  +   +K A   
Sbjct: 175 -SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233

Query: 106 -------PGLPED-----ISPDLAFIVQSCWVEDPNLRPSFSQIIRM 140
                              SP+   +++     DP  RP+ SQ ++ 
Sbjct: 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 59.7 bits (144), Expect = 5e-11
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +Q  +KLADFG+A + T T++      GT  WMAPE+         ++  
Sbjct: 127 IKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI--------QQSA 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   M  ++  +    K+  P L  + S      + +C
Sbjct: 178 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLTGEFSKPFKEFIDAC 236

Query: 124 WVEDPNLRPSFSQIIR 139
             +DP+ RP+  ++++
Sbjct: 237 LNKDPSFRPTAKELLK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 59.6 bits (144), Expect = 6e-11
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 27/143 (18%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K  N+ LT + K +KL DFG AR  T +    A T  GT  ++ PE++        E  
Sbjct: 126 IKSKNIFLTQNGK-VKLGDFGSARLLT-SPGAYACTYVGTPYYVPPEIW--------ENM 175

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMS--NL-----QAAYAAAFKHARPGLPEDISPD 115
            YNNK D++S G +L+EL T + PF+  S  NL     Q +Y          LP   S +
Sbjct: 176 PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP--------LPSHYSYE 227

Query: 116 LAFIVQSCWVEDPNLRPSFSQII 138
           L  +++  +  +P  RPS + I+
Sbjct: 228 LRSLIKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 59.5 bits (144), Expect = 8e-11
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 15/155 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG   + T  +   +   GT  WMAPE+   VT     +K 
Sbjct: 141 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV---VT-----RKA 191

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 250

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D   R S  ++++  + FL   +P S   P
Sbjct: 251 RCLEMDVEKRGSAKELLQ--HPFLKIAKPLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 59.3 bits (143), Expect = 9e-11
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMM-TAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +Q  +KLADFG+A + T T++      GT  WMAPE+         ++  
Sbjct: 127 IKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI--------KQSA 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y+ K D++S GI   EL     P   +  ++  +    K++ P L    S      V++C
Sbjct: 178 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQYSKPFKEFVEAC 236

Query: 124 WVEDPNLRPSFSQIIR 139
             +DP  RP+  ++++
Sbjct: 237 LNKDPRFRPTAKELLK 252

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 59.3 bits (143), Expect = 1e-10
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 5   MKEDNLLLT-PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LLT P Q  +KLADFG A   + +    +  GT  WMAPE+   + + +G+   
Sbjct: 147 IKAGNILLTEPGQ--VKLADFGSA---SKSSPANSFVGTPYWMAPEV--ILAMDEGQ--- 196

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y+ KVDV+S GI   EL   + P   M+ + A Y  A   +      + +      V  C
Sbjct: 197 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYC 256

Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
             + P  RP+ ++++R  + F+   RP 
Sbjct: 257 LQKIPQERPASAELLR--HDFVRRDRPA 282

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 58.7 bits (142), Expect = 1e-10
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 31/144 (21%)

Query: 15  DQKSLKLADFGLAREETVTEMMTAETGTY-----------RWMAPE-LYSTVTLRQGEKK 62
           +  ++ +ADFGL++           +G Y           +W+A E L   V        
Sbjct: 148 EDMTVCVADFGLSK--------KIYSGDYYRQGRIAKMPVKWIAIESLADRV-------- 191

Query: 63  HYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
            Y +K DV++FG+ +WE+ T  + P+ G+ N +  Y       R   PED   +L  ++ 
Sbjct: 192 -YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI-YDYLRHGNRLKQPEDCLDELYDLMY 249

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFL 145
           SCW  DP  RP+F+++  +L   L
Sbjct: 250 SCWRADPKDRPTFTKLREVLENIL 273

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 12/133 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+LLT +   +KLADFG++ + T T +   ++  GT  WMAPE+ + V  + G    
Sbjct: 128 KGANILLT-EDGDVKLADFGVSAQLTAT-IAKRKSFIGTPYWMAPEVAA-VERKGG---- 180

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED---ISPDLAFIV 120
           Y+ K D+++ GI   EL   + P   +  ++A +  +  +  P   +D    SP     +
Sbjct: 181 YDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFI 240

Query: 121 QSCWVEDPNLRPS 133
           + C  +DP  RP+
Sbjct: 241 KKCLTKDPKKRPT 253

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 28/154 (18%)

Query: 1   MG-KFMKEDN-----------LLLTPDQKSLKLADFGLAREETVTEMMTAETGT----YR 44
           MG K+++E N           LL+T  Q   K++DFGL++     E             +
Sbjct: 106 MGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALGADENYYKAKTHGKWPVK 163

Query: 45  WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKH 103
           W APE  +           +++K DV+SFG+++WE  +  + P++GM   +         
Sbjct: 164 WYAPECMNYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVT-QMIESG 214

Query: 104 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 137
            R   P+   P++  +++ CW    + RP F+ +
Sbjct: 215 ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVV 248

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 58.2 bits (140), Expect = 2e-10
 Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 15/167 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG   + T  +   +   GT  WMAPE+ +        +K 
Sbjct: 142 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT--------RKA 192

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 251

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSN 168
            C   D   R S  ++++  + FL   +P S   P     + A  +N
Sbjct: 252 RCLDMDVEKRGSAKELLQ--HQFLKIAKPLSSLTPLIAAAKEATKNN 296

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 27/83 (32%), Positives = 45/83 (54%)

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y  K D+YS G+VLWE+ T ++PFE ++  +       K+    LP D   ++  IV++C
Sbjct: 199 YTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEAC 258

Query: 124 WVEDPNLRPSFSQIIRMLNAFLF 146
              D   RP+  +I+  L+ + F
Sbjct: 259 TSHDSIKRPNIKEILYNLSLYKF 281

Length = 283

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 57.7 bits (139), Expect = 4e-10
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 12/131 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE--ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   + L DFGL++E      E   +  GT  +MAPE+       +G+  
Sbjct: 131 IKLENILLDSEGHVV-LTDFGLSKEFLSEEKERTYSFCGTIEYMAPEII------RGKGG 183

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           H    VD +S GI+++ELLT   PF  EG  N Q+  +       P  P  I P+   ++
Sbjct: 184 H-GKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLL 242

Query: 121 QSCWVEDPNLR 131
                +DP  R
Sbjct: 243 HKLLRKDPKKR 253

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 57.2 bits (138), Expect = 4e-10
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 12/129 (9%)

Query: 20  KLADFGLAREETVTEMMTAETG--TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL 77
           K++ F   +E+    + T  +G     W APE      ++     H+++  DV+SFGIV+
Sbjct: 147 KISGFRRLQEDKSEAIYTTMSGKSPVLWAAPE-----AIQYH---HFSSASDVWSFGIVM 198

Query: 78  WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ 136
           WE+++    P+  MS  Q    A     R   P +    L  ++  CW ++   RP FSQ
Sbjct: 199 WEVMSYGERPYWDMSG-QDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQ 257

Query: 137 IIRMLNAFL 145
           I  +L+  +
Sbjct: 258 IHSILSKMV 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 57.0 bits (137), Expect = 4e-10
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 16/130 (12%)

Query: 20  KLADFGLAREETVTEMMTAETGTY--RWMAPEL--YSTVTLRQGEKKHYNNKVDVYSFGI 75
           K+ADFGLAR     E    E   +  +W APE   + + T+          K DV+SFGI
Sbjct: 142 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI----------KSDVWSFGI 191

Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           +L E++T  R+P+ GMSN +   A    +  P  PE+   +L  I+  CW   P  RP+F
Sbjct: 192 LLMEIVTYGRIPYPGMSNPEVIRALERGYRMP-RPENCPEELYNIMMRCWKNRPEERPTF 250

Query: 135 SQIIRMLNAF 144
             I  +L+ F
Sbjct: 251 EYIQSVLDDF 260

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 57.4 bits (138), Expect = 5e-10
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 5   MKEDNLLLT-PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LLT P Q  +KLADFG A   ++     +  GT  WMAPE+   + + +G+   
Sbjct: 151 IKAGNILLTEPGQ--VKLADFGSA---SIASPANSFVGTPYWMAPEV--ILAMDEGQ--- 200

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y+ KVDV+S GI   EL   + P   M+ + A Y  A   +      + S      V SC
Sbjct: 201 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSC 260

Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTLRPPS 152
             + P  RP+  ++++ +  F+   RP +
Sbjct: 261 LQKIPQDRPTSEELLKHM--FVLRERPET 287

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 57.0 bits (137), Expect = 5e-10
 Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 20/140 (14%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR     E    +   +  +W APE  LY   T+          
Sbjct: 133 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 182

Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  P +    L  ++  CW 
Sbjct: 183 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWR 241

Query: 126 EDPNLRPSFSQIIRMLNAFL 145
           ++P  RP+F      L AFL
Sbjct: 242 KEPEERPTF----EYLQAFL 257

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 57.0 bits (137), Expect = 6e-10
 Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 15/167 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL     S+KL DFG   + T  +   +   GT  WMAPE+ +        +K 
Sbjct: 141 IKSDNVLLGM-DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT--------RKA 191

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +SP     + 
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSPIFRDFLN 250

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSN 168
            C   D   R S  ++++  + FL   +P S   P     + A  SN
Sbjct: 251 RCLEMDVEKRGSAKELLQ--HPFLKLAKPLSSLTPLILAAKEAMKSN 295

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 56.7 bits (138), Expect = 6e-10
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 13/92 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K  N+L+  D   LKLADFGLAR   +     T E  T  YR  APE+        G K
Sbjct: 124 LKPQNILINRDG-VLKLADFGLARAFGIPLRTYTHEVVTLWYR--APEIL------LGSK 174

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            HY+  VD++S G +  E++T +  F G S +
Sbjct: 175 -HYSTAVDIWSVGCIFAEMITGKPLFPGDSEI 205

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 56.6 bits (137), Expect = 7e-10
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 35/144 (24%)

Query: 18  SLKLADFGLAREETVTEMMTAETGTY-----------RWMAPELYSTVTLRQGEKKHYNN 66
           ++K+ADFG++R           +  Y           RWMA E     ++  G+   +  
Sbjct: 168 TIKIADFGMSRN--------LYSSDYYRVQGRAPLPIRWMAWE-----SVLLGK---FTT 211

Query: 67  KVDVYSFGIVLWELLT--NRLPFEGMSNLQAAYAAAFKHARPGLPE-----DISP-DLAF 118
           K DV++FG+ LWE+LT     P+E +++ Q    A       G           P D+  
Sbjct: 212 KSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYE 271

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLN 142
           ++  CW  D   RP+F +I   L 
Sbjct: 272 LMLECWRRDEEDRPTFREIHLFLQ 295

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 56.2 bits (135), Expect = 8e-10
 Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +   +KLADFG+A + T T++      GT  WMAPE+         ++  
Sbjct: 127 IKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI--------KQSA 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   +  ++  +    K+  P L  + S  L   V++C
Sbjct: 178 YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEAC 236

Query: 124 WVEDPNLRPSFSQIIR 139
             ++P+ RP+  ++++
Sbjct: 237 LNKEPSFRPTAKELLK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 25/146 (17%)

Query: 9   NLLLTPD--QKSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQ 58
           N LLT     +  K+ADFG+AR+             M+       +WM PE +       
Sbjct: 146 NCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPI-----KWMPPEAFLDGI--- 197

Query: 59  GEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
                + +K DV+SFG++LWE+ +   +P+ G +N Q          R   P+     + 
Sbjct: 198 -----FTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-QEVMEFVTGGGRLDPPKGCPGPVY 251

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNA 143
            I+  CW   P  RP+F+ I+  +  
Sbjct: 252 RIMTDCWQHTPEDRPNFATILERIQY 277

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 56.0 bits (136), Expect = 1e-09
 Identities = 54/186 (29%), Positives = 74/186 (39%), Gaps = 51/186 (27%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWM-APEL-YSTVTLRQGEK 61
           +K +NLL+  D   LKLADFGLAR   +    MT +  T RW  APEL +          
Sbjct: 128 LKPNNLLIASDGV-LKLADFGLARSFGSPNRKMTHQVVT-RWYRAPELLFGA-------- 177

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPF-------------------------EGMSNLQAA 96
           +HY   VD++S G +  ELL  R+PF                          G+++L   
Sbjct: 178 RHYGVGVDMWSVGCIFAELL-LRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP-- 234

Query: 97  YAAAFKHARPGLPED-----ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
               FK   P  P        S D   ++Q     +PN R +  Q    L    F+  P 
Sbjct: 235 DYVEFKP-FPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ---ALEHPYFSNDPA 290

Query: 152 SPSVPE 157
            P+ P 
Sbjct: 291 -PTPPS 295

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  NLL+  +   LK+ DFGLAR E   E   MT E  T  + APE+           +
Sbjct: 129 IKPGNLLVNSNCV-LKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG-------SR 180

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           HY + VD++S G +  ELL  R+ F+  S +Q
Sbjct: 181 HYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ 212

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 55.9 bits (134), Expect = 1e-09
 Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 15/155 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG   + T  +   +   GT  WMAPE+ +        +K 
Sbjct: 141 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT--------RKA 191

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTPELQNPERLSAVFRDFLN 250

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D + R S  ++++  + FL   +P S   P
Sbjct: 251 RCLEMDVDRRGSAKELLQ--HPFLKLAKPLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 55.8 bits (134), Expect = 1e-09
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LLT D   +KLADFG++ +   T +   +  GT  WMAPE+    T++      
Sbjct: 136 LKAGNVLLTLD-GDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTP--- 191

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y+ K D++S GI L E+     P   ++ ++     A K   P L  P   S +    ++
Sbjct: 192 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSEPPTLSQPSKWSMEFRDFLK 250

Query: 122 SCWVEDPNLRPSFSQII 138
           +   + P  RPS +Q++
Sbjct: 251 TALDKHPETRPSAAQLL 267

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 10/139 (7%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K  N+LL     ++KL DFG++ +   +   T + G   +MAPE       R G    Y+
Sbjct: 135 KPSNILLD-RNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA-RDG----YD 188

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI----SPDLAFIVQ 121
            + DV+S GI L+E+ T + P+   +++        K   P L        SP     + 
Sbjct: 189 VRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFIN 248

Query: 122 SCWVEDPNLRPSFSQIIRM 140
            C ++D + RP + +++  
Sbjct: 249 LCLIKDESKRPKYKELLEH 267

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 55.4 bits (133), Expect = 2e-09
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 12/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D   +K+ADFG+ +E  + +  T    GT  ++APE+        G+K  
Sbjct: 122 LKLDNILLDTD-GHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEIL------LGQK-- 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN  VD +SFG++L+E+L  + PF G    +     + +   P  P  ++ +   I+   
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQSPFHGHD--EEELFQSIRMDNPCYPRWLTREAKDILVKL 230

Query: 124 WVEDPNLRPSFSQIIR 139
           +V +P  R      IR
Sbjct: 231 FVREPERRLGVKGDIR 246

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 55.0 bits (132), Expect = 2e-09
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 15/127 (11%)

Query: 18  SLKLADFGLARE-ETV----TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS 72
           ++KL DFG ++  +T+    T M +  TGT  WM+PE+ S      GE   Y  K D++S
Sbjct: 144 NVKLGDFGASKRLQTICLSGTGMKSV-TGTPYWMSPEVIS------GEG--YGRKADIWS 194

Query: 73  FGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP 132
            G  + E+LT + P+     + A +  A +   P LP  +S      ++  +VE   LRP
Sbjct: 195 VGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFVE-AKLRP 253

Query: 133 SFSQIIR 139
           S  +++R
Sbjct: 254 SADELLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 55.0 bits (132), Expect = 2e-09
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 17/133 (12%)

Query: 11  LLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPE--LYSTVTLRQGEKKHYN 65
           +L  D+ ++K++D GL RE    +   +M       RWM+PE  +Y   ++         
Sbjct: 155 VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDS------- 207

Query: 66  NKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
              D++S+G+VLWE+ +  L P+ G SN         +   P  P+D    +  ++  CW
Sbjct: 208 ---DIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLP-CPDDCPAWVYTLMLECW 263

Query: 125 VEDPNLRPSFSQI 137
            E P+ RP F  I
Sbjct: 264 NEFPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 22/144 (15%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE---------TGTYRWMAPELYSTVT 55
           +K DN+L+  +   LKL DFGL++   V   +             GT  ++APE    V 
Sbjct: 119 LKPDNILIDSNGH-LKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPE----VI 173

Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA--AAFKHARPGLPEDIS 113
           L QG    ++  VD +S G +L+E L    PF G    +  +      K   P   E +S
Sbjct: 174 LGQG----HSKTVDWWSLGCILYEFLVGIPPFHG-ETPEEIFQNILNGKIEWPEDVE-VS 227

Query: 114 PDLAFIVQSCWVEDPNLRPSFSQI 137
            +   ++    V DP  R     I
Sbjct: 228 DEAIDLISKLLVPDPEKRLGAKSI 251

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 55.0 bits (132), Expect = 3e-09
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 15/130 (11%)

Query: 19  LKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R+   T+       T    RWM PE   ++  R+     +  + D++SFG+
Sbjct: 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE---SILYRK-----FTTESDIWSFGV 212

Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPS 133
           VLWE+ T  + P+  +SN +A         R    P    P++  I+Q CW  +P  R  
Sbjct: 213 VLWEIFTYGKQPWYQLSNTEA--IECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMV 270

Query: 134 FSQIIRMLNA 143
              I   L A
Sbjct: 271 IKDIHSRLQA 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 38/154 (24%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET---------------------GTY 43
           +K +N+LL  D   +K+ DFG A+         +                       GT 
Sbjct: 128 LKPENILLDKD-MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA 186

Query: 44  RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAA 100
            +++PEL +        +K      D+++ G +++++LT + PF G +     Q      
Sbjct: 187 EYVSPELLN--------EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE 238

Query: 101 FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           +       P +  PD   +++   V DP  R   
Sbjct: 239 YS-----FPPNFPPDAKDLIEKLLVLDPQDRLGV 267

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 55.0 bits (132), Expect = 3e-09
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 27/139 (19%)

Query: 10  LLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---------RWMAPELYSTVTLRQGE 60
           L+ TP    +K+ DFGLA+      ++ A+   Y         +WMA        L    
Sbjct: 141 LVKTPQH--VKITDFGLAK------LLGADEKEYHAEGGKVPIKWMA--------LESIL 184

Query: 61  KKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFI 119
            + Y ++ DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I
Sbjct: 185 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMI 243

Query: 120 VQSCWVEDPNLRPSFSQII 138
           +  CW+ D + RP F ++I
Sbjct: 244 MVKCWMIDADSRPKFRELI 262

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 54.5 bits (131), Expect = 4e-09
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPE-LYSTVTLRQGEKKHY 64
           N +L  +  ++ +ADFGL+++    +      A     +W+A E L   V         Y
Sbjct: 143 NCMLNENM-TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNV---------Y 192

Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
               DV++FG+ +WE++T  + P+ G+ N +  Y    K  R   P D   D+  ++  C
Sbjct: 193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI-YNYLIKGNRLKQPPDCLEDVYELMCQC 251

Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W  +P  RPSF  +   L    
Sbjct: 252 WSPEPKCRPSFQHLRDQLELIW 273

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 40/167 (23%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPE-LYSTVTLRQGEK 61
           +K  NLL++ D   LK+ADFGLAR   E    + + +  T  + APE LY          
Sbjct: 125 LKPANLLISADG-VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG--------A 175

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEG------------------------MSNLQAAY 97
           + Y+  VD+++ G +  ELL     F G                        +++L    
Sbjct: 176 RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN 235

Query: 98  AAAFKHARPGLPEDISPDL---AF-IVQSCWVEDPNLRPSFSQIIRM 140
              F  ++P   E+I PD    A  +++   V DP+ R S ++ +R 
Sbjct: 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 14/140 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMT-AETGTYRWMAPELYSTVTLRQGEKKHY 64
           K  N+LLT     +KL DFG++ +   T        GT  WMAPE+   +   +     Y
Sbjct: 140 KGQNILLT-KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEV---IACDEQPDASY 195

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR---PGL--PEDISPDLAFI 119
           + + DV+S GI   EL   + P   M  ++    A FK  R   P L  PE+ S      
Sbjct: 196 DARSDVWSLGITAIELADGKPPLCDMHPMR----ALFKIPRNPPPTLKSPENWSKKFNDF 251

Query: 120 VQSCWVEDPNLRPSFSQIIR 139
           +  C +++   RP   +++ 
Sbjct: 252 ISECLIKNYEQRPFMEELLE 271

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 54.5 bits (131), Expect = 4e-09
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTY--RWMAPELYSTVTLRQGEKKHYN 65
           N  LT D  S+K+ D+GLA E+   +  +T +      RW+APEL          K    
Sbjct: 130 NCQLTADL-SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQ-T 187

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQA-AYAAA---FKHARPGLPEDISPDLAFIV 120
            K +++S G+ +WEL T    P+  +S+ Q           K  +P L    S     ++
Sbjct: 188 KKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVM 247

Query: 121 QSCWVEDPNLRPSFSQIIRML 141
           Q CW+ DP  RP+  ++  +L
Sbjct: 248 QFCWL-DPETRPTAEEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 54.6 bits (131), Expect = 4e-09
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMM-TAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LLT  +  +KL DFG++ + T T +      GT  WMAPE+   +   Q     
Sbjct: 150 VKGNNILLT-TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEV---IACEQQLDST 205

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y+ + DV+S GI   EL     P   +  ++A +    ++  P L  PE  S +    ++
Sbjct: 206 YDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP-RNPPPTLHQPELWSNEFNDFIR 264

Query: 122 SCWVEDPNLRPSFSQIIR 139
            C  +D   RP+ S +++
Sbjct: 265 KCLTKDYEKRPTVSDLLQ 282

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 54.3 bits (130), Expect = 4e-09
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 23/159 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGL-AREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+         +  GT  WMAPE+ S +         
Sbjct: 144 IKSDSILLTSDGR-IKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLP-------- 194

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     LQ     A +  R  LP        +S  L 
Sbjct: 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-----AMRRIRDNLPPRVKDSHKVSSVLR 249

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V +P+ R +  ++++  + FL    PPS  VP
Sbjct: 250 GFLDLMLVREPSQRATAQELLQ--HPFLKLAGPPSCIVP 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 54.0 bits (130), Expect = 5e-09
 Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 14/141 (9%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQ 58
           M + +K  N+ +T     +KL D GL R  + ++   A +  GT  +M+PE         
Sbjct: 128 MHRDIKPANVFITAT-GVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERI------- 178

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEG-MSNLQAAYAAAFKHARPGLPEDI-SPDL 116
             +  YN K D++S G +L+E+   + PF G   NL +      K   P LP D  S +L
Sbjct: 179 -HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEEL 237

Query: 117 AFIVQSCWVEDPNLRPSFSQI 137
             +V  C   DP  RP  S +
Sbjct: 238 RDLVSRCINPDPEKRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 54.2 bits (130), Expect = 5e-09
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMM-TAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LLT  +  +KL DFG++ + T T +      GT  WMAPE+   +   Q     
Sbjct: 154 VKGNNILLTT-EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEV---IACEQQYDYS 209

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y+ + DV+S GI   EL     P   M  ++  +    ++  P L  PE         + 
Sbjct: 210 YDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP-RNPPPTLLHPEKWCRSFNHFIS 268

Query: 122 SCWVEDPNLRPSFSQII 138
            C ++D   RPS + ++
Sbjct: 269 QCLIKDFEARPSVTHLL 285

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 54.0 bits (130), Expect = 6e-09
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 12/128 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  ++  +KL DFGL++E    E       GT  +MAPE    V  R+G    
Sbjct: 124 LKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE----VVNRRG---- 174

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +    D +SFG++++E+LT  LPF+G  + +       K A+ G+P+ +SP+   ++++ 
Sbjct: 175 HTQSADWWSFGVLMFEMLTGSLPFQG-KDRKETMTMILK-AKLGMPQFLSPEAQSLLRAL 232

Query: 124 WVEDPNLR 131
           +  +P  R
Sbjct: 233 FKRNPANR 240

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 53.5 bits (128), Expect = 7e-09
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)

Query: 18  SLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           ++KL DFG ++      M    + + TGT  WM+PE+ S      GE   Y  K DV+S 
Sbjct: 144 NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS------GEG--YGRKADVWSL 195

Query: 74  GIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           G  + E+LT + P+     + A +  A +   P LP  IS      +   +VE  + RPS
Sbjct: 196 GCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFLGCIFVEARH-RPS 254

Query: 134 FSQIIR 139
             +++R
Sbjct: 255 AEELLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 53.4 bits (129), Expect = 7e-09
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 11/85 (12%)

Query: 6   KEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           K +NLLL  D    +KL DFG A++    +      GT  ++APE+           K Y
Sbjct: 120 KPENLLL--DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEII--------LNKGY 169

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
           +  VD +S GI+L+ELLT R PF  
Sbjct: 170 DFSVDYWSLGILLYELLTGRPPFGE 194

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 53.1 bits (127), Expect = 1e-08
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 13/132 (9%)

Query: 11  LLTPDQKSLKLADFGLAREETVTEMMTAETG---TYRWMAPELYSTVTLRQGEKKHYNNK 67
           +L      +K+ DFGLAR   + E      G     +WMA        L     + + ++
Sbjct: 140 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA--------LESILHRRFTHQ 191

Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            DV+S+G+ +WEL+T    P++G+   +       K  R   P   + D+  I+  CW+ 
Sbjct: 192 SDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-KGERLPQPPICTIDVYMIMVKCWMI 250

Query: 127 DPNLRPSFSQII 138
           D   RP F +++
Sbjct: 251 DSECRPRFRELV 262

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 53.2 bits (127), Expect = 1e-08
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +NL+L  D   +K+ DFGL +E  +T+  T +T  GT  ++APE+         E  
Sbjct: 121 LKLENLMLDKD-GHIKITDFGLCKE-GITDAATMKTFCGTPEYLAPEVL--------EDN 170

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD +  G+V++E++  RLPF    + +       +  +   P  +S D   ++  
Sbjct: 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIK--FPRTLSADAKSLLSG 228

Query: 123 CWVEDPNLR 131
             ++DPN R
Sbjct: 229 LLIKDPNKR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 7/135 (5%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K  N+LL     ++KL DFG++     ++  T   G   +MAPE              Y+
Sbjct: 142 KPSNILLD-ASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDP----PDPNPKYD 196

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSC 123
            + DV+S GI L EL T + P++             +   P LP  E  SPD    V  C
Sbjct: 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLC 256

Query: 124 WVEDPNLRPSFSQII 138
             +D   RP + +++
Sbjct: 257 LTKDHRKRPKYRELL 271

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 21/142 (14%)

Query: 9   NLLLT--PDQKS-----LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           N+LL    D+K+     +KL+D G++      E++        W+ PE            
Sbjct: 130 NVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERI---PWVPPECIE-------NP 179

Query: 62  KHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           ++ +   D +SFG  LWE+ +    P   +S L +     F   R  LP     +LA ++
Sbjct: 180 QNLSLAADKWSFGTTLWEIFSGGDKP---LSALDSQKKLQFYEDRHQLPAPKWTELANLI 236

Query: 121 QSCWVEDPNLRPSFSQIIRMLN 142
             C   +P+ RPSF  IIR LN
Sbjct: 237 NQCMDYEPDFRPSFRAIIRDLN 258

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL  +   +K+ADFG+ +E  +   +T  T  GT  ++APE+         +  
Sbjct: 122 LKLDNVLLDSE-GHIKIADFGMCKE-GILGGVTTSTFCGTPDYIAPEIL------SYQP- 172

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD ++ G++L+E+L  + PFEG    +   +      R   P  +S +   I++S
Sbjct: 173 -YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR--YPRWLSKEAKSILKS 229

Query: 123 CWVEDPNLR 131
              ++P  R
Sbjct: 230 FLTKNPEKR 238

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 52.3 bits (125), Expect = 2e-08
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+L T D   +KLADFG++ + T T +   +  GT  WMAPE+   V     + + 
Sbjct: 129 LKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV---VMCETSKDRP 184

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y+ K DV+S GI L E+     P   ++ ++     A K   P L  P   S +    ++
Sbjct: 185 YDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSEPPTLAQPSRWSSEFKDFLK 243

Query: 122 SCWVEDPNLRPSFSQIIR 139
            C  ++ + R + +Q+++
Sbjct: 244 KCLEKNVDARWTTTQLLQ 261

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 25/151 (16%)

Query: 9   NLLLTPDQKSLKLADFGLA-------REETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           N+LL  D   +++ADFG+A       ++   +E  T      +WMA E   ++   +   
Sbjct: 139 NILLKSDSI-VQIADFGVADLLYPDDKKYFYSEHKTP----IKWMALE---SILFGR--- 187

Query: 62  KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
             Y ++ DV+S+G+ +WE+++    P+ GM           K  R   P+  + D+  ++
Sbjct: 188 --YTHQSDVWSYGVTVWEMMSYGAEPYAGM-RPHEVPDLLEKGERLAQPQICTIDVYMVM 244

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
             CW+ D N+RP+F +   + N F    R P
Sbjct: 245 VKCWMIDENVRPTFKE---LANEFTRMARDP 272

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 13/126 (10%)

Query: 18  SLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           ++KL DFG ++      M    + + TGT  WM+PE+ S      GE   Y  K DV+S 
Sbjct: 144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVIS------GEG--YGRKADVWSV 195

Query: 74  GIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
              + E+LT + P+     + A +  A +  +P LP+ +S      ++  +VE+   RP+
Sbjct: 196 ACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFVEE-KRRPT 254

Query: 134 FSQIIR 139
              ++R
Sbjct: 255 AEFLLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 51.6 bits (123), Expect = 4e-08
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 15/148 (10%)

Query: 5   MKEDNLLLT-PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ P    +KL DFG A   ++        GT  WMAPE+   + + +G+   
Sbjct: 141 VKAGNILLSEPGL--VKLGDFGSA---SIMAPANXFVGTPYWMAPEV--ILAMDEGQ--- 190

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED-ISPDLAFIVQS 122
           Y+ KVDV+S GI   EL   + P   M+ + A Y  A ++  P L     S      V S
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPALQSGHWSEYFRNFVDS 249

Query: 123 CWVEDPNLRPSFSQIIRMLNAFLFTLRP 150
           C  + P  RP+   +++  + F+   RP
Sbjct: 250 CLQKIPQDRPTSEVLLK--HRFVLRERP 275

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 39/159 (24%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY----------RWMAPELYSTVTLRQ 58
           N+L+  +   +K++DFGLA+      ++  +   Y           W APE   T     
Sbjct: 139 NILVESE-DLVKISDFGLAK------VLPEDKDYYYVKEPGESPIFWYAPECLRTSK--- 188

Query: 59  GEKKHYNNKVDVYSFGIVLWELLT----NRLPFEGMSNLQAAYAAAFKHAR--------P 106
                +++  DV+SFG+ L+EL T    ++ P      +           R         
Sbjct: 189 -----FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE 243

Query: 107 GLPE-DISPDLAF-IVQSCWVEDPNLRPSFSQIIRMLNA 143
            LP     PD  + +++ CW  +P  RPSF+ +I +++ 
Sbjct: 244 RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 51.5 bits (123), Expect = 5e-08
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN++L  D   +K+ADFG+ +E    +   +   GT  ++APE+       QG K  
Sbjct: 122 LKLDNVMLDRDGH-IKIADFGMCKENVFGDNRASTFCGTPDYIAPEIL------QGLK-- 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +SFG++L+E+L  + PF G  + +     + +   P  P  I+ +   I++  
Sbjct: 173 YTFSVDWWSFGVLLYEMLIGQSPFHG--DDEDELFESIRVDTPHYPRWITKESKDILEKL 230

Query: 124 WVEDPNLR 131
           +  DP  R
Sbjct: 231 FERDPTRR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 51.4 bits (124), Expect = 5e-08
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 16/92 (17%)

Query: 9   NLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKK 62
           N+L+  +   LK+ DFGLAR    +E     +T    T  YR  APEL            
Sbjct: 133 NILVNSNC-DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYR--APELL-------LSSS 182

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
            Y   +D++S G +  ELLT +  F G   + 
Sbjct: 183 RYTKAIDIWSVGCIFAELLTRKPLFPGRDYID 214

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 51.0 bits (123), Expect = 6e-08
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 14/89 (15%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGT--YRWMAPELYSTVTLRQGE 60
           +K  N+L+  +   LKLADFGLAR  T       T    T  YR   PEL        G 
Sbjct: 126 IKGSNILIN-NDGVLKLADFGLARPYTKRNSADYTNRVITLWYR--PPELL------LGA 176

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            + Y  +VD++S G +L EL   +  F+G
Sbjct: 177 TR-YGPEVDMWSVGCILAELFLGKPIFQG 204

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 51.2 bits (122), Expect = 6e-08
 Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGL-AREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+         +  GT  WMAPE+ S        +  
Sbjct: 143 IKSDSILLTLDGR-VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVIS--------RTP 193

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+   S +Q     A K  R   P        ISP L 
Sbjct: 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-----AMKRLRDSPPPKLKNAHKISPVLR 248

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             ++     +P  R +  +++   + FL     P   VP
Sbjct: 249 DFLERMLTREPQERATAQELLD--HPFLLQTGLPECLVP 285

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 50.6 bits (122), Expect = 8e-08
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 15/85 (17%)

Query: 5   MKEDNLLLTPDQK-SLKLADFGLA-REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL  D    +K+ DFG A R +  T  +    GT  ++APE    + L +G   
Sbjct: 127 LKPENLLL--DSDGYIKITDFGFAKRVKGRTYTLC---GTPEYLAPE----IILSKG--- 174

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF 87
            Y   VD ++ GI+++E+L    PF
Sbjct: 175 -YGKAVDWWALGILIYEMLAGYPPF 198

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 50.6 bits (121), Expect = 1e-07
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 10/84 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +E  +    M    GT  ++APE+         E   
Sbjct: 121 LKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL--------EDND 171

Query: 64  YNNKVDVYSFGIVLWELLTNRLPF 87
           Y   VD +  G+V++E++  RLPF
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPF 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 12/85 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR-QGEKKH 63
           +K  N+LLT  +  +KL DFG++  E V  +    TGT  +MAPE       R QG  K 
Sbjct: 131 IKPSNILLT-RKGQVKLCDFGVS-GELVNSLAGTFTGTSFYMAPE-------RIQG--KP 179

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFE 88
           Y+   DV+S G+ L E+  NR PF 
Sbjct: 180 YSITSDVWSLGLTLLEVAQNRFPFP 204

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 21/156 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLLLT D+  LK+ADFGLAR      + MT +  T  + APEL    T        
Sbjct: 134 LKVSNLLLT-DKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCT-------T 185

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISP---DLAFIV 120
           Y   +D+++ G +L ELL ++    G S ++           P   E I P   DL  + 
Sbjct: 186 YTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPN--ESIWPGFSDLPLVG 243

Query: 121 QSCWVEDP--NLRPSFSQI----IRMLNAFLFTLRP 150
           +    + P  NL+  F  +    +R+LN FL    P
Sbjct: 244 KFTLPKQPYNNLKHKFPWLSEAGLRLLN-FLLMYDP 278

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+     +LKLADFGLAR   +     T E  T  + APE+           +H
Sbjct: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLG-------SRH 180

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           Y+  VD++S G +  E++  +  F G S +
Sbjct: 181 YSTPVDIWSVGCIFAEMVNQKPLFPGDSEI 210

Length = 294

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 20/98 (20%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR------EETVTEMMTAETGTYRWM-APE--LYSTVT 55
           +K  N+LL  D + +KLADFGLAR      E     ++T    T RW  APE  L ST  
Sbjct: 133 LKPSNILLNSDCR-VKLADFGLARSLSELEENPENPVLTDYVAT-RWYRAPEILLGST-- 188

Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
                   Y   VD++S G +L E+L  +  F G S L
Sbjct: 189 -------RYTKGVDMWSVGCILGEMLLGKPLFPGTSTL 219

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 29/154 (18%)

Query: 11  LLTPDQKSLKLADFGLAR-----EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           +L   +  +K+ DFGL +     +E        E+  + W APE  +       E K ++
Sbjct: 139 ILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIF-WYAPESLT-------ESK-FS 189

Query: 66  NKVDVYSFGIVLWELLT----NRLP----FEGMSNLQAAYAAAF-------KHARPGLPE 110
              DV+SFG+VL+EL T    +  P       M N +      +        + R   P 
Sbjct: 190 VASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPP 249

Query: 111 DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 144
               ++  I++ CW  DP+ RPSFS++   + A 
Sbjct: 250 GCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 29/146 (19%)

Query: 9   NLLLTPD------QKSLKLADFGLAREETVTEMMTAETGTYR-----WMAPELYSTVTLR 57
           N+L+            +KL+D G+         +T  +   R     W+APE        
Sbjct: 131 NILVARYGLNEGYVPFIKLSDPGIP--------ITVLSREERVERIPWIAPECI------ 176

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDL 116
           +  +       D +SFG  L E+ +N   P   +S L ++    F   +  LP     +L
Sbjct: 177 RNGQASLTIAADKWSFGTTLLEICSNGEEP---LSTLSSSEKERFYQDQHRLPMPDCAEL 233

Query: 117 AFIVQSCWVEDPNLRPSFSQIIRMLN 142
           A ++  CW  DP  RPSF  I+R LN
Sbjct: 234 ANLINQCWTYDPTKRPSFRAILRDLN 259

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 49.5 bits (118), Expect = 2e-07
 Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 21/146 (14%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQG-----E 60
           N  LT D  ++K+ D+G+       + +  E       RW+APEL   V    G     E
Sbjct: 129 NCFLTSDL-TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPEL---VGEFHGGLITAE 184

Query: 61  KKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNL----QAAYAAAFKHARPGLPEDISPD 115
           +   +N   V++ G+ LWEL  N   P+  +S+             K  +P L    S  
Sbjct: 185 QTKPSN---VWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSER 241

Query: 116 LAFIVQSCWVEDPNLRPSFSQIIRML 141
              ++Q CW+  P  R +  ++ R+L
Sbjct: 242 WYEVLQFCWLS-PEKRATAEEVHRLL 266

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 12/86 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRW-MAPELYSTVTLRQGEKKH 63
           +K  N+ +  D + LK+ DFGLAR     + MT    T RW  APE    + L      H
Sbjct: 144 LKPSNIAVNEDCE-LKILDFGLARH--TDDEMTGYVAT-RWYRAPE----IML---NWMH 192

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG 89
           YN  VD++S G ++ ELLT +  F G
Sbjct: 193 YNQTVDIWSVGCIMAELLTGKTLFPG 218

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 18/92 (19%)

Query: 5   MKEDNLLL--TPDQKSLKLADFGLAR----EETVTEMMTAETGTYRWM-APELYSTVTLR 57
           +K  NLLL    D   LK+ DFGLAR    E   T  +T    T RW  APE+       
Sbjct: 132 LKPSNLLLNTNCD---LKICDFGLARIADPEHDHTGFLTEYVAT-RWYRAPEIMLN---- 183

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
               K Y   +D++S G +L E+L+NR  F G
Sbjct: 184 ---SKGYTKAIDIWSVGCILAEMLSNRPLFPG 212

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 48.9 bits (116), Expect = 3e-07
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 25/138 (18%)

Query: 18  SLKLADFGLA---------REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV 68
           ++ +ADFGL+         R+  + +M        +W+A E  +         + Y  K 
Sbjct: 150 NVCVADFGLSKKIYNGDYYRQGRIAKM------PVKWIAIESLA--------DRVYTTKS 195

Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+SFG+ +WE+ T  + P+ G+ N +  Y    +  R   P D    L  ++ SCW+ +
Sbjct: 196 DVWSFGVTMWEIATRGQTPYPGVENSE-IYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLN 254

Query: 128 PNLRPSFSQIIRMLNAFL 145
           P  RPSF  +   L   L
Sbjct: 255 PKDRPSFETLRCELEKAL 272

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DNLLL  +   +K+ADFGL +E       T+   GT  ++APE+ +        +  
Sbjct: 127 LKLDNLLLDTE-GFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLT--------ETS 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG 89
           Y   VD +  G++++E+L    PF G
Sbjct: 178 YTRAVDWWGLGVLIYEMLVGESPFPG 203

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 49.2 bits (117), Expect = 3e-07
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL      LKLADFG   +   T M+  +T  GT  +++PE+  +    QG   
Sbjct: 168 VKPDNMLLD-KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKS----QGGDG 222

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPEDI 112
           +Y  + D +S G+ L+E+L    PF   S L   Y+    H      PED+
Sbjct: 223 YYGRECDWWSVGVFLFEMLVGDTPFYADS-LVGTYSKIMDHKNSLNFPEDV 272

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 48.9 bits (116), Expect = 3e-07
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR     + MT    T  + APE+            HY
Sbjct: 146 LKPSNLAVNEDCE-LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM-------HY 195

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 196 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 224

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 48.8 bits (116), Expect = 4e-07
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 12/87 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN++L   +  +K+ADFG+ +E  + + +T +T  GT  ++APE+ +         +
Sbjct: 127 LKLDNVMLD-SEGHIKIADFGMCKE-NMWDGVTTKTFCGTPDYIAPEIIAY--------Q 176

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEG 89
            Y   VD ++FG++L+E+L  + PFEG
Sbjct: 177 PYGKSVDWWAFGVLLYEMLAGQAPFEG 203

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 28/131 (21%)

Query: 19  LKLADFG-----LAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           +KL+D G     L+REE V  +         W+APE               +   D +SF
Sbjct: 163 IKLSDPGVSFTALSREERVERI--------PWIAPECVPGGN-------SLSTAADKWSF 207

Query: 74  GIVLWELLTNRLPFEGMSNLQAAYAAA---FKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           G  L E+      F+G   L+    +    F   +  LPE    +LA ++  C   +P  
Sbjct: 208 GTTLLEIC-----FDGEVPLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQ 262

Query: 131 RPSFSQIIRML 141
           RPSF  I+R L
Sbjct: 263 RPSFRTILRDL 273

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 25/101 (24%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---------------EETVTEMMTAET-GTYRWMAP 48
           +K DNLL+T     +KL DFGL++               E+   E +  +  GT  ++AP
Sbjct: 127 LKPDNLLIT-SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP 185

Query: 49  ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
           E    V LRQG    Y   VD ++ GI+L+E L   +PF G
Sbjct: 186 E----VILRQG----YGKPVDWWAMGIILYEFLVGCVPFFG 218

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 9/83 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D  +++++D GLA E    + +    GT  +MAPE+         + + Y
Sbjct: 121 LKPENVLLD-DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVL--------QGEVY 171

Query: 65  NNKVDVYSFGIVLWELLTNRLPF 87
           +  VD ++ G  L+E++  R PF
Sbjct: 172 DFSVDWFALGCTLYEMIAGRSPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 48.4 bits (115), Expect = 4e-07
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 9/84 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           MK +N+LL  DQ + +L+D GLA E    + +T   GT  +MAPE+         +++ Y
Sbjct: 121 MKPENVLLD-DQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEIL--------KEEPY 171

Query: 65  NNKVDVYSFGIVLWELLTNRLPFE 88
           +  VD ++ G  ++E++  R PF+
Sbjct: 172 SYPVDWFAMGCSIYEMVAGRTPFK 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +NL+L  D   +K+ DFGL +E  +++  T +T  GT  ++APE+         E  
Sbjct: 121 IKLENLMLDKD-GHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVL--------EDN 170

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++  
Sbjct: 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAG 228

Query: 123 CWVEDPNLR 131
              +DP  R
Sbjct: 229 LLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 13/131 (9%)

Query: 11  LLTPDQKSLKLADFGLARE-ETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNNK 67
           +L      +K+ DFGLAR  E   +   A+ G    +WMA E            + + ++
Sbjct: 140 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--------HYRKFTHQ 191

Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            DV+S+G+ +WEL+T    P++G+   +       K  R   P   + D+  ++  CW+ 
Sbjct: 192 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGERLPQPPICTIDVYMVMVKCWMI 250

Query: 127 DPNLRPSFSQI 137
           D + RP F ++
Sbjct: 251 DADSRPKFKEL 261

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 15/131 (11%)

Query: 19  LKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R+   T+       T    RWM PE   ++  R+     +  + DV+SFG+
Sbjct: 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE---SIMYRK-----FTTESDVWSFGV 213

Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAF-IVQSCWVEDPNLRPS 133
           +LWE+ T  + P+  +SN +          R      + P   + I+  CW  +P  R +
Sbjct: 214 ILWEIFTYGKQPWFQLSNTEV--IECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLN 271

Query: 134 FSQIIRMLNAF 144
             +I ++L+A 
Sbjct: 272 IKEIYKILHAL 282

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 48.3 bits (115), Expect = 6e-07
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEK 61
           +K  NLL+    K++K+ADFG++R   + + M    +  GT  +M+PE  +T  L  G  
Sbjct: 194 IKPSNLLIN-SAKNVKIADFGVSR--ILAQTMDPCNSSVGTIAYMSPERINT-DLNHGAY 249

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFE-GMSNLQAAYAAAFKHAR-PGLPEDISPDLAFI 119
             Y    D++S G+ + E    R PF  G     A+   A   ++ P  P   S +    
Sbjct: 250 DGYAG--DIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHF 307

Query: 120 VQSCWVEDPNLRPSFSQIIR 139
           +  C   +P  R S  Q+++
Sbjct: 308 ISCCLQREPAKRWSAMQLLQ 327

Length = 353

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 48.1 bits (115), Expect = 7e-07
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLLL  +   LK+ DFGLAR  +   + MT    T  + APEL    +        
Sbjct: 134 LKPSNLLLNANC-DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCS-------E 185

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG 89
           Y   +DV+S G +  ELL  +  F G
Sbjct: 186 YTTAIDVWSVGCIFAELLGRKPLFPG 211

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 47.9 bits (114), Expect = 7e-07
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQG 59
           M + +K  NLL+   +  LK+AD GL R  ++  +  T E  T  + APE+    T    
Sbjct: 132 MHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGST---- 187

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
              HY+  VD++S G +  E+   +  F G S LQ
Sbjct: 188 ---HYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ 219

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 48.0 bits (115), Expect = 7e-07
 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 13/92 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K  NLLL  ++  LK+ DFGLARE  +  +  T    T  YR  APEL        G K
Sbjct: 132 LKTSNLLLN-NRGILKICDFGLAREYGSPLKPYTQLVVTLWYR--APELL------LGAK 182

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           + Y+  +D++S G +  ELLT +  F G S +
Sbjct: 183 E-YSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.0 bits (114), Expect = 7e-07
 Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 29/155 (18%)

Query: 9   NLLLTPDQKSLKLADFGLAR-----EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           N+LL  D + +K+ DFGLA+      E        ++  + W A E          E K 
Sbjct: 137 NVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-WYAVECLK-------ENKF 187

Query: 64  YNNKVDVYSFGIVLWELLTN-------RLPFEGMSNLQAAYAAAF-------KHARPGLP 109
                DV+SFG+ L+ELLT+          FE M   +              +  R   P
Sbjct: 188 SYAS-DVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCP 246

Query: 110 EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 144
           ++   ++  ++++CW  +   RP+F  +I +L   
Sbjct: 247 KNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 47.7 bits (113), Expect = 8e-07
 Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 12/87 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN++L   +  +K+ADFG+ +E  V + +T  T  GT  ++APE+ +         +
Sbjct: 127 LKLDNVMLD-SEGHIKIADFGMCKEHMV-DGVTTRTFCGTPDYIAPEIIAY--------Q 176

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEG 89
            Y   VD +++G++L+E+L  + PF+G
Sbjct: 177 PYGKSVDWWAYGVLLYEMLAGQPPFDG 203

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 47.8 bits (114), Expect = 9e-07
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL      LKLADFG   +     M+  +T  GT  +++PE    V   QG   
Sbjct: 168 VKPDNMLLD-KSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPE----VLKSQGGDG 222

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPEDIS 113
           +Y  + D +S G+ L+E+L    PF   S L   Y+    H      P+DI 
Sbjct: 223 YYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMDHKNSLTFPDDIE 273

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 47.3 bits (112), Expect = 1e-06
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 10/142 (7%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQG 59
           M + +K  N+LLT D   +KLADFG+A + T T     +  GT  WMAPE+ + V    G
Sbjct: 128 MHRDIKGANILLT-DNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEV-AAVEKNGG 185

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED---ISPDL 116
               YN   D+++ GI   EL   + P   +  ++A +  +  + +P   +D    S   
Sbjct: 186 ----YNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTF 241

Query: 117 AFIVQSCWVEDPNLRPSFSQII 138
              V+    ++P  RP+  +++
Sbjct: 242 HNFVKISLTKNPKKRPTAERLL 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +NL+L  D   +K+ DFGL +E  + +  T +T  GT  ++APE+         E  
Sbjct: 122 LKLENLMLDKD-GHIKITDFGLCKE-GIKDGATMKTFCGTPEYLAPEVL--------EDN 171

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++  
Sbjct: 172 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLSPEAKSLLSG 229

Query: 123 CWVEDPNLR 131
              +DP  R
Sbjct: 230 LLKKDPKQR 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 12/87 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN++L  +   +K+ADFG+ +E  +    T  T  GT  ++APE+ +         +
Sbjct: 127 LKLDNVMLDAE-GHIKIADFGMCKEN-IFGGKTTRTFCGTPDYIAPEIIAY--------Q 176

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEG 89
            Y   VD ++FG++L+E+L  + PF+G
Sbjct: 177 PYGKSVDWWAFGVLLYEMLAGQPPFDG 203

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 18  SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL 77
           +LK+ DFGLAR    + MMT    T  + APE    V L  G    Y   VD++S G ++
Sbjct: 156 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----VILGMG----YKENVDIWSVGCIM 207

Query: 78  WELLTNRLPFEG 89
            E++   + F G
Sbjct: 208 GEMIRGTVLFPG 219

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 7/137 (5%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE--ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  N+LLT +   +KL DFG++ +   TV    T   GT  WMAPE+   +   +    
Sbjct: 137 IKGQNVLLT-ENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWMAPEV---IACDENPDA 191

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y+ K D++S GI   E+     P   M  ++A +      A     +  S      ++S
Sbjct: 192 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIES 251

Query: 123 CWVEDPNLRPSFSQIIR 139
           C V++ + RP+  Q+++
Sbjct: 252 CLVKNHSQRPTTEQLMK 268

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 47.2 bits (112), Expect = 1e-06
 Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 19/141 (13%)

Query: 12  LTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYNNKV 68
           L  +  ++K+ADFG++R     +    +       RWMA E      +  G+   +    
Sbjct: 170 LVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWE-----CILMGK---FTTAS 221

Query: 69  DVYSFGIVLWELLT--NRLPFEGMSNLQAAYAAA--FKHARP----GLPEDISPDLAFIV 120
           DV++FG+ LWE+L      P+  +++ Q    A   F+          P      L  ++
Sbjct: 222 DVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELM 281

Query: 121 QSCWVEDPNLRPSFSQIIRML 141
             CW  D   RPSFS I   L
Sbjct: 282 LQCWSRDCRERPSFSDIHAFL 302

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKK 62
           +K  N+L+T D + +K+ADFGLAR  +    +T+   T  YR  APE    V L+     
Sbjct: 133 LKPQNILVTSDGQ-VKIADFGLARIYSFEMALTSVVVTLWYR--APE----VLLQS---- 181

Query: 63  HYNNKVDVYSFGIVLWELLTNRLP-FEGMSNLQ 94
            Y   VD++S G +  EL   R P F G S   
Sbjct: 182 SYATPVDMWSVGCIFAELF-RRRPLFRGTSEAD 213

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 10/85 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  +    KLADFG+ +E       T+   GT  ++APE+         ++  
Sbjct: 122 LKLDNVLLDHEGHC-KLADFGMCKEGIFNGKTTSTFCGTPDYIAPEIL--------QEML 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFE 88
           Y   VD ++ G++L+E+L    PFE
Sbjct: 173 YGPSVDWWAMGVLLYEMLCGHAPFE 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 28/132 (21%)

Query: 19  LKLADFG-----LAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           +KL+D G     L+R+E V  +         W+APE          + K+ +   D +SF
Sbjct: 151 IKLSDPGIPITVLSRQECVERI--------PWIAPECVE-------DSKNLSIAADKWSF 195

Query: 74  GIVLWELLTN-RLPFEG--MSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           G  LWE+  N  +P +   ++  +  Y        P   E     LA ++  C   DPN 
Sbjct: 196 GTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSCKE-----LADLMTHCMNYDPNQ 250

Query: 131 RPSFSQIIRMLN 142
           RP F  I+R +N
Sbjct: 251 RPFFRAIMRDIN 262

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 19/140 (13%)

Query: 19  LKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R+   T+       T    RWM PE   ++  R+     +  + DV+S G+
Sbjct: 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE---SIMYRK-----FTTESDVWSLGV 210

Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPS 133
           VLWE+ T  + P+  +SN +          R    P     ++  ++  CW  +P++R +
Sbjct: 211 VLWEIFTYGKQPWYQLSNNEV--IECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLN 268

Query: 134 FSQIIRMLNAFLFTLRPPSP 153
               I+ +++ L  L   SP
Sbjct: 269 ----IKEIHSLLQNLAKASP 284

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL   Q  +KL DFGL +E      +T    GT  +MAPE+      R G    
Sbjct: 126 LKPENILLDA-QGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILM----RSG---- 176

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG 89
           +   VD +S G +++++LT   PF  
Sbjct: 177 HGKAVDWWSLGALMYDMLTGAPPFTA 202

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 12/143 (8%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           M + +K  N+ +T     +KL D GL R   + T    +  GT  +M+PE        + 
Sbjct: 128 MHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE--------RI 178

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEG-MSNLQAAYAAAFKHARPGLPED-ISPDLA 117
            +  YN K D++S G +L+E+   + PF G   NL +      +   P LP D  S +L 
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 238

Query: 118 FIVQSCWVEDPNLRPSFSQIIRM 140
            +V  C   DP  RP  + +  +
Sbjct: 239 QLVNMCINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 20/132 (15%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +NLL+  DQ   LKL DFGL+R            GT  ++APE              
Sbjct: 123 IKPENLLI--DQTGHLKLTDFGLSR---NGLENKKFVGTPDYLAPETI--------LGVG 169

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISPDLAFI 119
            +   D +S G V++E L    PF   +    A        R   PE+     SP+   +
Sbjct: 170 DDKMSDWWSLGCVIFEFLFGYPPFH--AETPDAVFDNILSRRINWPEEVKEFCSPEAVDL 227

Query: 120 VQSCWVEDPNLR 131
           +      DP  R
Sbjct: 228 INRLLCMDPAKR 239

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+  +   +KLADFGLAR   V     T E  T  + APE+           K+
Sbjct: 126 LKPQNLLINTEGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           Y+  VD++S G +  E++T R  F G S +
Sbjct: 178 YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 207

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 20/101 (19%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGT---Y------RWM-APELYS 52
           +K  N+L+  +Q  LK+ADFGLAR  +           G    Y      RW   PEL  
Sbjct: 141 IKAANILID-NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLL 199

Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
                 GE++ Y   VD++  G V  E+ T R   +G S++
Sbjct: 200 ------GERR-YTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+++  D  +LK+ DFGLAR    + MMT    T  + APE    V L  G    Y
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----VILGMG----Y 202

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
              VD++S G ++ E++   + F G
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPG 227

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 45.3 bits (107), Expect = 5e-06
 Identities = 32/143 (22%), Positives = 74/143 (51%), Gaps = 15/143 (10%)

Query: 9   NLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           N+LL  +Q   K++DFGL++    +++  +  +A     +W APE    +  R+     +
Sbjct: 125 NVLLV-NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPE---CINFRK-----F 175

Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +++ DV+S+GI +WE  +  + P++ M   +   +   +  R   P +  P++  +++ C
Sbjct: 176 SSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM-SFIEQGKRLDCPAECPPEMYALMKDC 234

Query: 124 WVEDPNLRPSFSQIIRMLNAFLF 146
           W+     RP+F+++   +  + +
Sbjct: 235 WIYKWEDRPNFAKVEERMRTYYY 257

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 45.3 bits (107), Expect = 6e-06
 Identities = 41/166 (24%), Positives = 58/166 (34%), Gaps = 60/166 (36%)

Query: 40  TGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA--- 96
           T    W++PEL     LRQ +   YN K D+YS GI   EL T R+PF+ M   Q     
Sbjct: 169 TSVLPWLSPEL-----LRQ-DLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQK 222

Query: 97  ---------YAAAF-------KHARPGL--------------------------PEDISP 114
                        F       K+++ G+                           +  SP
Sbjct: 223 LKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSP 282

Query: 115 DLAFIVQSCWVEDPNLRPS---------FSQIIRMLNAFLFTLRPP 151
               +V+ C  +DP  RPS         F Q+       + +L PP
Sbjct: 283 AFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQTQGSILSLLPP 328

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 45.4 bits (107), Expect = 6e-06
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 9/110 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL      LKLADFG   +     M+  +T  GT  +++PE+  +    QG   
Sbjct: 168 VKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS----QGGDG 222

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPED 111
           +Y  + D +S G+ L+E+L    PF   S L   Y+    H      P+D
Sbjct: 223 YYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFPDD 271

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+   + +LKLADFGLAR   V     T E  T  + APE    + L     + 
Sbjct: 125 LKPQNLLID-REGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPE----ILLGS---RQ 176

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMS 91
           Y+  VD++S G +  E++  R  F G S
Sbjct: 177 YSTPVDIWSIGCIFAEMVNRRPLFPGDS 204

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 45.0 bits (106), Expect = 7e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+++  D  +LK+ DFGLAR      MMT    T  + APE    V L  G    Y
Sbjct: 149 LKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPE----VILGMG----Y 199

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
              VD++S G ++ EL+   + F+G  ++
Sbjct: 200 KENVDIWSVGCIMGELVKGSVIFQGTDHI 228

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 7/87 (8%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAE--TGTYRWMAPELYSTVTLRQGEK 61
           +K +N+L+  D+   +KLADFG A   T  +M+ ++   GT  ++APE+ +T  +    K
Sbjct: 128 IKPENVLI--DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTT--MNGDGK 183

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFE 88
             Y  + D +S G++ +E++  R PF 
Sbjct: 184 GTYGVECDWWSLGVIAYEMIYGRSPFH 210

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 45.0 bits (106), Expect = 8e-06
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+  ++  LKLADFGLAR ++V T+  + E  T  +  P++    T        
Sbjct: 129 LKPQNLLIN-EKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGST-------E 180

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG 89
           Y+  +D++  G +L+E+ T R  F G
Sbjct: 181 YSTPIDMWGVGCILYEMATGRPMFPG 206

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 44.7 bits (106), Expect = 9e-06
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR-----EETVTEMMTAETGTYRWM-APELYSTVTLRQ 58
           +K  NLL+  D + LK+ DFGLAR            MT    T RW  APE+  +     
Sbjct: 131 LKPGNLLVNADCE-LKICDFGLARGFSENPGENAGFMTEYVAT-RWYRAPEIMLSF---- 184

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
              + Y   +DV+S G +L ELL  +  F+G
Sbjct: 185 ---QSYTKAIDVWSVGCILAELLGRKPVFKG 212

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  +    KLADFG+ +E  +  + T    GT  ++APE+         ++  
Sbjct: 122 LKLDNILLDAE-GHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEIL--------QELE 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFE 88
           Y   VD ++ G++++E++  + PFE
Sbjct: 173 YGPSVDWWALGVLMYEMMAGQPPFE 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 45.1 bits (106), Expect = 1e-05
 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 20  KLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 79
           K+ DFGL++   +  M  +  GT  + +PEL         E K Y++K D+++ G +++E
Sbjct: 182 KIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLH------ETKSYDDKSDMWALGCIIYE 235

Query: 80  LLTNRLPFEGMSNLQAAYAAAFKHARPGLP-EDISPDLAFIVQSCWVEDPNLRPSFSQII 138
           L + + PF   +N  +   +  K   P LP +  S +L  ++++        RPS  Q +
Sbjct: 236 LCSGKTPFHKANNF-SQLISELKRG-PDLPIKGKSKELNILIKNLLNLSAKERPSALQCL 293

Length = 1021

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQG 59
           M + +K  N+LLT D   +KLADFG++ + T T     +  GT  WMAPE+ +       
Sbjct: 128 MHRDIKGANILLT-DNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAV-----E 181

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED---ISPDL 116
            K  YN   D+++ GI   EL   + P   +  ++A +     + +P   +D    S   
Sbjct: 182 RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSF 241

Query: 117 AFIVQSCWVEDPNLRPSFSQIIR 139
              V+    ++P  RP+  ++++
Sbjct: 242 HHFVKMALTKNPKKRPTAEKLLQ 264

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+  ++  LKLADFGLAR +++ T+  + E  T  +  P++    T        
Sbjct: 130 LKPQNLLIN-ERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST-------D 181

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG 89
           Y+ ++D++  G + +E+ T R  F G
Sbjct: 182 YSTQIDMWGVGCIFYEMSTGRPLFPG 207

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+ +  D + L++ DFGLAR+    + MT    T  + APE+            HY
Sbjct: 144 LKPSNVAVNEDCE-LRILDFGLARQ--ADDEMTGYVATRWYRAPEIMLNWM-------HY 193

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
           N  VD++S G ++ ELL  +  F G
Sbjct: 194 NQTVDIWSVGCIMAELLKGKALFPG 218

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 44/168 (26%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWM-APELYSTVTLRQGE 60
           +K +N+L++     +KL DFG AR  T+    E+ T    T RW  APEL        G+
Sbjct: 126 IKPENILVSQS-GVVKLCDFGFAR--TLAAPGEVYTDYVAT-RWYRAPELLV------GD 175

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMS-------------NLQAAYAAAFKHARPG 107
            K Y   VD+++ G ++ E+LT    F G S             NL   +   F+     
Sbjct: 176 TK-YGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234

Query: 108 ----LPE------------DISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
               LPE             +S  +  + + C   DP+ RPS SQ++ 
Sbjct: 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+++  D  +LK+ DFGLAR    + MMT    T  + APE    V L  G    Y
Sbjct: 145 LKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----VILGMG----Y 195

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
              VD++S G ++ E++ +++ F G
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPG 220

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 13/84 (15%)

Query: 5   MKEDNLLLTPDQK-SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +NLLL  D K  +K+ DFG A++  V +      GT  ++APE+         + K 
Sbjct: 144 LKPENLLL--DNKGHVKVTDFGFAKK--VPDRTFTLCGTPEYLAPEVI--------QSKG 191

Query: 64  YNNKVDVYSFGIVLWELLTNRLPF 87
           +   VD ++ G++L+E +    PF
Sbjct: 192 HGKAVDWWTMGVLLYEFIAGYPPF 215

Length = 329

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 14/95 (14%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N L+  D    +KL DFGL++   +     +  G+  +MAPE+       +G+   
Sbjct: 127 LKPENFLI--DASGHIKLTDFGLSKG--IVTYANSVVGSPDYMAPEVL------RGKG-- 174

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 98
           Y+  VD +S G +L+E L    PF G S     + 
Sbjct: 175 YDFTVDYWSLGCMLYEFLCGFPPFSG-STPNETWE 208

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 10/85 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR       MT    T  + APE    V L      HY
Sbjct: 143 LKPGNLAVNEDCE-LKILDFGLARHADAE--MTGYVVTRWYRAPE----VILNW---MHY 192

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
           N  VD++S G ++ E+LT +  F+G
Sbjct: 193 NQTVDIWSVGCIMAEMLTGKTLFKG 217

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 12/143 (8%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           M + +K  N+ +T     +KL D GL R   + T    +  GT  +M+PE        + 
Sbjct: 128 MHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE--------RI 178

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEG-MSNLQAAYAAAFKHARPGLP-EDISPDLA 117
            +  YN K D++S G +L+E+   + PF G   NL +      +   P LP E  S  L 
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLR 238

Query: 118 FIVQSCWVEDPNLRPSFSQIIRM 140
            +V  C   DP+ RP    + ++
Sbjct: 239 ELVSMCIYPDPDQRPDIGYVHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 10/84 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMT-AETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  +  +++++D GLA E    +  T    GT  +MAPEL       QGE+  
Sbjct: 123 LKPENVLLD-NDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELL------QGEE-- 173

Query: 64  YNNKVDVYSFGIVLWELLTNRLPF 87
           Y+  VD ++ G+ L+E++  R PF
Sbjct: 174 YDFSVDYFALGVTLYEMIAARGPF 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           M + +K  N+L+   +  +KL DFG++  + +  M  +  GT  +M+PE        QG 
Sbjct: 126 MHRDVKPSNILVN-SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERL------QG- 176

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDISP 114
             HY+ + D++S G+ L EL   R P        L+A +         G P  ISP
Sbjct: 177 -THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISP 231

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 10/84 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL   Q  + L DFGL +E       T+   GT  ++APE+     LR   K+ 
Sbjct: 122 LKPENILLD-SQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEV-----LR---KQP 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPF 87
           Y+  VD +  G VL+E+L    PF
Sbjct: 173 YDRTVDWWCLGAVLYEMLYGLPPF 196

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 9/93 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWM-APELYSTVTLRQGEKKHY 64
           K +N+L+T  Q  +KL DFG AR  T       +    RW  APEL    T        Y
Sbjct: 127 KPENILIT-KQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDT-------QY 178

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
              VDV++ G V  ELLT +  + G S++   Y
Sbjct: 179 GPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY 211

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE--ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  N+LLT +   +KL DFG++ +   TV    T   GT  WMAPE+   +   +    
Sbjct: 147 IKGQNVLLT-ENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWMAPEV---IACDENPDA 201

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQ 121
            Y+ + D++S GI   E+     P   M  ++A +    ++  P L  +  S      ++
Sbjct: 202 TYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIP-RNPPPKLKSKKWSKKFIDFIE 260

Query: 122 SCWVEDPNLRPSFSQIIR 139
            C V++   RPS  Q+++
Sbjct: 261 GCLVKNYLSRPSTEQLLK 278

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+ +  D   + + D G A+   V        GT    APE+ +        +  Y
Sbjct: 183 VKTENIFIN-DVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLA--------RDKY 233

Query: 65  NNKVDVYSFGIVLWELL 81
           N+K D++S GIVL+E+L
Sbjct: 234 NSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 13/93 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPE--LYSTVTLRQGEK 61
           +K  NLL++ ++  LKLADFGLAR ++V ++  + E  T  +  P+  L ST        
Sbjct: 129 LKPQNLLIS-ERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGST-------- 179

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
             Y+  +D++  G + +E+ T R  F G ++++
Sbjct: 180 -EYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE 211

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 17/140 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTV---TLRQGEKK 62
           N LLT D  ++K+ D+GL+  +   +        +   RW+APEL   V    L   + K
Sbjct: 130 NCLLTADL-TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTK 188

Query: 63  HYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA-AYAA---AFKHARPGLPEDISPDLA 117
             N    V+S G+ +WEL      P+  +S+ Q   Y       K  +P L   +S    
Sbjct: 189 ESN----VWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWY 244

Query: 118 FIVQSCWVEDPNLRPSFSQI 137
            ++Q CW++ P  RPS  ++
Sbjct: 245 EVMQFCWLQ-PEQRPSAEEV 263

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 11/85 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  +   +KL DFG A++  + +      GT  ++APE+         + K +
Sbjct: 127 LKPENILLDKE-GHIKLTDFGFAKK--LRDRTWTLCGTPEYLAPEVI--------QSKGH 175

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
           N  VD ++ GI+++E+L    PF  
Sbjct: 176 NKAVDWWALGILIYEMLVGYPPFFD 200

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 17/136 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+L+   +  +KL DFG++ +  V  +     GT  +MAPE  S      GE+  Y
Sbjct: 121 VKPSNMLVN-TRGQVKLCDFGVSTQ-LVNSIAKTYVGTNAYMAPERIS------GEQ--Y 170

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA------AAFKHARPGLPE-DISPDLA 117
               DV+S GI   EL   R P+  +   Q +               P LP    S    
Sbjct: 171 GIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFV 230

Query: 118 FIVQSCWVEDPNLRPS 133
             +  C  + P  RP+
Sbjct: 231 HFITQCMRKQPKERPA 246

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 10/84 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL   Q  + L DFGL +E    ++  T   GT  ++APE+          K+ 
Sbjct: 122 LKPENILLD-SQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVI--------RKQP 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPF 87
           Y+N VD +  G VL+E+L    PF
Sbjct: 173 YDNTVDWWCLGAVLYEMLYGLPPF 196

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 42.1 bits (99), Expect = 7e-05
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 12/91 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  +   +KL D+G+ +E       T+   GT  ++APE+     LR GE   
Sbjct: 122 LKLDNVLLDAE-GHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEI-----LR-GED-- 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFE--GMSN 92
           Y   VD ++ G++++E++  R PF+  GMS+
Sbjct: 173 YGFSVDWWALGVLMFEMMAGRSPFDIVGMSD 203

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 41.6 bits (98), Expect = 8e-05
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 11/89 (12%)

Query: 5   MKEDNLLLTPDQKSL-KLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  NLL+  D K + KLADFGLAR   +   + T E  T  + APE    V L  G  +
Sbjct: 127 LKPQNLLI--DNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPE----VLL--GSPR 178

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMS 91
            Y+  VD++S G +  E+ T +  F G S
Sbjct: 179 -YSTPVDIWSIGTIFAEMATKKPLFHGDS 206

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWM-APELYSTVTLRQGEKKHY 64
           K +N+L+      LKLADFG  R        T    T RW  APE      L  G   +Y
Sbjct: 127 KPENILI--KDDILKLADFGSCRGIYSKPPYTEYIST-RWYRAPE----CLLTDG---YY 176

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
             K+D+++ G V +E+L+    F G
Sbjct: 177 GPKMDIWAVGCVFFEILSLFPLFPG 201

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 22/90 (24%)

Query: 15  DQKSLKLADFGLAR---------------EETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
            +   K+ADFGLAR                    E MT++  T  + APEL     L   
Sbjct: 154 SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPEL-----LMGA 208

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
           EK  Y+  VD++S G +  ELLT +  F G
Sbjct: 209 EK--YHFAVDMWSVGCIFAELLTGKPLFPG 236

Length = 335

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLL++ D   LKLADFGLAR ++V     +      W  P     V L   E   Y
Sbjct: 129 LKPQNLLIS-DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRP---PDVLLGSTE---Y 181

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           +  +D++  G +  E++     F GM ++Q
Sbjct: 182 STCLDMWGVGCIFVEMIQGVAAFPGMKDIQ 211

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 10/89 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR+ T +EM T    T  + APE    V L      HY
Sbjct: 144 LKPGNLAVNEDCE-LKILDFGLARQ-TDSEM-TGYVVTRWYRAPE----VILNW---MHY 193

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
              VD++S G ++ E+LT +  F+G  +L
Sbjct: 194 TQTVDIWSVGCIMAEMLTGKPLFKGHDHL 222

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 10/84 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL   Q  + L DFGL +E    E  T+   GT  ++APE+     LR   K+ 
Sbjct: 122 LKPENILLD-SQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEV-----LR---KEP 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPF 87
           Y+  VD +  G VL+E+L    PF
Sbjct: 173 YDRTVDWWCLGAVLYEMLYGLPPF 196

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 14/96 (14%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWM-APELYSTVTLRQGEK 61
           K +N+L++     LKL DFG AR   +     +    Y   RW  APEL    T      
Sbjct: 127 KPENILVSESGV-LKLCDFGFAR--ALRARPASPLTDYVATRWYRAPELLVGDT------ 177

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
            +Y   VDV++ G ++ ELL     F G S++   Y
Sbjct: 178 -NYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLY 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+  ++  LKLADFGLAR ++V T+  + E  T  +  P+    V L   E   
Sbjct: 130 LKPQNLLIN-ERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPD----VLLGSSE--- 181

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG 89
           Y+ ++D++  G + +E+ + R  F G
Sbjct: 182 YSTQIDMWGVGCIFFEMASGRPLFPG 207

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 15/91 (16%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-----ETVTEMMTAETGTYRWM-APELYSTVTLRQ 58
           +K  NLL+  D   L++ DFG+AR            MT    T RW  APEL  ++    
Sbjct: 133 LKPSNLLVNEDC-ELRIGDFGMARGLSSSPTEHKYFMTEYVAT-RWYRAPELLLSL---- 186

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
                Y   +D++S G +  E+L  R  F G
Sbjct: 187 ---PEYTTAIDMWSVGCIFAEMLGRRQLFPG 214

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 45/192 (23%), Positives = 64/192 (33%), Gaps = 53/192 (27%)

Query: 6   KEDNLLLTPDQKSLKLADFGLA-------------REETVTEMMTAET------------ 40
           K DN+L+  D   +KLADFGL               +                       
Sbjct: 128 KPDNILIDAD-GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVR 186

Query: 41  -----GTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 95
                GT  ++APE    V         Y  + D +S G++L+E+L    PF     LQ 
Sbjct: 187 ANSTVGTPDYIAPE----VLRGTP----YGLECDWWSLGVILYEMLYGFPPFYS-DTLQE 237

Query: 96  AYAAAFKHARP-GLPED--ISPDLAFIVQSCWVEDPNLR-PSFSQIIRMLNAFLFT---- 147
            Y            P D  +SP+   ++    + DP  R  SF +I    + F       
Sbjct: 238 TYNKIINWKESLRFPPDPPVSPEAIDLICRL-LCDPEDRLGSFEEIKS--HPFFKGIDWE 294

Query: 148 --LRPPSPSVPE 157
                  P VPE
Sbjct: 295 NLRETKPPFVPE 306

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D   +KL D+G+ +E       T+   GT  ++APE+       +GE+  
Sbjct: 122 LKLDNVLLDAD-GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEIL------RGEE-- 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFE 88
           Y   VD ++ G++++E++  R PF+
Sbjct: 173 YGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 13/83 (15%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR-----EETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           MK  N+L+T D   LKLADFGLAR     + +     T    T  +  PEL        G
Sbjct: 145 MKAANILITKD-GILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELL------LG 197

Query: 60  EKKHYNNKVDVYSFGIVLWELLT 82
           E + Y   +D++  G ++ E+ T
Sbjct: 198 E-RDYGPPIDMWGAGCIMAEMWT 219

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 36/150 (24%), Positives = 50/150 (33%), Gaps = 52/150 (34%)

Query: 45  WMAPELYSTVTLRQ---GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ------- 94
           W++PE+     L+Q   G    YN K D+YS GI   EL    +PF+ M   Q       
Sbjct: 174 WLSPEV-----LQQNLQG----YNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR 224

Query: 95  -------------------AAYAAAFKHARPGLPEDI------SPDLAFIVQSCWVEDPN 129
                              +   ++ +H       D       S      V+ C   DP 
Sbjct: 225 GTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPE 284

Query: 130 LRPSFSQI--------IRMLNAFLFTLRPP 151
            RPS SQ+         +  N  L  L  P
Sbjct: 285 SRPSASQLLNHSFFKQCKRRNTSLLDLLKP 314

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 43/147 (29%)

Query: 18  SLKLADFGLAREETVTEMMTAETGTY-----------RWMAPELYSTVTLRQGEKKHYNN 66
           ++K+ADFG++R           +G Y           RWM+ E   ++ L +     +  
Sbjct: 168 TIKIADFGMSR--------NLYSGDYYRIQGRAVLPIRWMSWE---SILLGK-----FTT 211

Query: 67  KVDVYSFGIVLWELLT--NRLPFEGMSNLQAAYAAA--FKHA-------RPGLPEDISPD 115
             DV++FG+ LWE+LT     P+  +S+ Q        F+         +P L     PD
Sbjct: 212 ASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPAL----CPD 267

Query: 116 LAF-IVQSCWVEDPNLRPSFSQIIRML 141
             + ++ SCW  +   RPSF +I   L
Sbjct: 268 SLYKLMLSCWRRNAKERPSFQEIHATL 294

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPE-LYSTVTLRQGEKK 62
           +K  NLL+    + LKLADFGLAR   +     + E  T  + AP+ L  + T       
Sbjct: 126 LKPQNLLINKRGE-LKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRT------- 177

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN 92
            Y+  +D++S G ++ E++T R  F G +N
Sbjct: 178 -YSTSIDIWSVGCIMAEMITGRPLFPGTNN 206

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 15/110 (13%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K  N+LLT D   LKL      +         +    Y +MAPE+    +  +       
Sbjct: 38  KSGNILLTWD-GLLKLDGSVAFKTPE-----QSRPDPY-FMAPEVIQGQSYTE------- 83

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPD 115
            K D+YS GI L+E L   LP+     L A             P D S  
Sbjct: 84  -KADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNL 132

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLL+ P+  +LKL DFG A+     +   +   +  + APEL    T       +Y
Sbjct: 196 LKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGAT-------NY 248

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
              +D++S G ++ E++     F G S++
Sbjct: 249 TTHIDLWSLGCIIAEMILGYPIFSGQSSV 277

Length = 440

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 19/98 (19%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--------EETVTEMMTAETGTYRWMAPELYSTVTL 56
           +K  N+ +  +   LK+ DFGLAR        +  ++E +   T  YR  +P L  +   
Sbjct: 140 LKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLV--TKWYR--SPRLLLSPN- 194

Query: 57  RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
                 +Y   +D+++ G +  E+LT +  F G   L+
Sbjct: 195 ------NYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 37/174 (21%), Positives = 60/174 (34%), Gaps = 46/174 (26%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           M + +K  N+L+    + +KL DFG++  + +  M  +  GT  +M+PE        QG 
Sbjct: 122 MHRDVKPSNILVNSRGE-IKLCDFGVS-GQLIDSMANSFVGTRSYMSPERL------QGT 173

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLP--------FEGMSNLQA-AYAAAFKHARPG---- 107
             HY  + D++S G+ L E+   R P         E M         A   H        
Sbjct: 174 --HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231

Query: 108 ----------------------LPEDI-SPDLAFIVQSCWVEDPNLRPSFSQII 138
                                 LP    S +    V  C  ++P  R    ++ 
Sbjct: 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELT 285

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWM-APELYSTVTLRQGE 60
           +K  N+L   D K LK+ DFGLAR    +T T +   +    RW  APEL  +   +   
Sbjct: 129 LKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK--- 184

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
              Y   +D++S G +  E+LT +  F G
Sbjct: 185 ---YTPAIDIWSIGCIFAEVLTGKPLFPG 210

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 17/135 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL   +  +KL D+G+ +E       T+   GT  ++APE+       +GE   
Sbjct: 122 LKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL------RGED-- 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFE--GMS-----NLQAAYAAAFKHARPGLPEDISPDL 116
           Y   VD ++ G++++E++  R PF+  G S     N +          +  +P  +S   
Sbjct: 173 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 232

Query: 117 AFIVQSCWVEDPNLR 131
           A +++S   +DP  R
Sbjct: 233 ASVLKSFLNKDPKER 247

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 9/90 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL++     LKLADFGLAR +++ ++  ++E  T  +  P++    T        
Sbjct: 129 LKPQNLLIS-YLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGAT-------D 180

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           Y++ +D++  G +  E+L  +  F G+S++
Sbjct: 181 YSSALDIWGAGCIFIEMLQGQPAFPGVSDV 210

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 10/84 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE-TGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL   Q  + L DFGL +E       T+   GT  ++APE+          K+ 
Sbjct: 122 LKPENILLD-SQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVL--------HKQP 172

Query: 64  YNNKVDVYSFGIVLWELLTNRLPF 87
           Y+  VD +  G VL+E+L    PF
Sbjct: 173 YDRTVDWWCLGAVLYEMLYGLPPF 196

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+L+T   + +KLADFGLAR  +    +T+   T  + APE+     L Q     Y
Sbjct: 136 LKPQNILVTSSGQ-IKLADFGLARIYSFQMALTSVVVTLWYRAPEV-----LLQSS---Y 186

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
              VD++S G +  E+   +  F G S++
Sbjct: 187 ATPVDLWSVGCIFAEMFRRKPLFRGSSDV 215

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D   ++++D GLA E    E +    GT  +MAPE+         + + Y
Sbjct: 128 LKPENILLD-DYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVV--------KNERY 178

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
               D +  G +++E++  + PF  
Sbjct: 179 TFSPDWWGLGCLIYEMIEGKSPFRQ 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+L+  +   LK+ DFGLAR +     MT    T  + APE+  T        + Y
Sbjct: 134 LKPSNILIN-ENCDLKICDFGLARIQD--PQMTGYVSTRYYRAPEIMLTW-------QKY 183

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
           + +VD++S G +  E+L  +  F G
Sbjct: 184 DVEVDIWSAGCIFAEMLEGKPLFPG 208

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 26/153 (16%)

Query: 11  LLTPDQKSLKLADFGLARE-ETVTEMMTAET---GTYRWMAPELYSTVTLRQGEKKHYNN 66
           +L   +  +K+ DFGL +  ET  E  T +        W APE          + K Y  
Sbjct: 140 VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLI-------QSKFYIA 192

Query: 67  KVDVYSFGIVLWELLT----------NRLPFEGMSNLQAAYAAAFKHARPG----LPEDI 112
             DV+SFG+ L+ELLT            L   G ++ Q       +    G     P + 
Sbjct: 193 S-DVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNC 251

Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
             ++  +++ CW   P+ R +F  +I    A L
Sbjct: 252 PEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 39.2 bits (91), Expect = 7e-04
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 11/123 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFG--LAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL  +   ++LADFG  L   +  T   +   GT  +++PE+   +    G+  
Sbjct: 128 IKPDNVLLDMN-GHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGK-- 184

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR----PGLPEDISPDLAF 118
            Y  + D +S G+ ++E+L    PF   S L   Y     H      P    D+S +   
Sbjct: 185 -YGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHEERFQFPSHITDVSEEAKD 242

Query: 119 IVQ 121
           ++Q
Sbjct: 243 LIQ 245

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 10/87 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  N+LL  ++  +KLADFGLAR      +   T +  T  +  PEL        GE++
Sbjct: 142 IKCSNILLN-NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELL------LGEER 194

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEG 89
            Y   +DV+S G +L EL T +  F+ 
Sbjct: 195 -YGPAIDVWSCGCILGELFTKKPIFQA 220

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 18/94 (19%)

Query: 5   MKEDNLLLT---PDQKSLKLADFGLAR------EETVTEMMTAETGTYRWMAPELYSTVT 55
           +K  N+L+    P++  +K+ D GLAR      +          T  YR  APEL     
Sbjct: 134 LKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYR--APELLLGA- 190

Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
                 +HY   +D+++ G +  ELLT    F+G
Sbjct: 191 ------RHYTKAIDIWAIGCIFAELLTLEPIFKG 218

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 38.8 bits (90), Expect = 8e-04
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D   ++++D GLA +    E +    GT  +MAPE+ +         + Y
Sbjct: 128 LKPENILLD-DYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNN--------QRY 178

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEG 89
               D +  G +++E++  + PF G
Sbjct: 179 TLSPDYWGLGCLIYEMIEGQSPFRG 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 38.9 bits (90), Expect = 9e-04
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 7/101 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFG--LAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K DN+L+  +   ++LADFG  L   E  T   +   GT  +++PE+   +   +  K 
Sbjct: 128 IKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM---EDGKG 183

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH 103
            Y  + D +S G+ ++E+L    PF   S L   Y     H
Sbjct: 184 KYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNH 223

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 11/85 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL      + L DFGL++   +T+  T  T  GT  ++APE    V L   ++K
Sbjct: 122 LKPENILLDAT-GHIALCDFGLSKAN-LTDNKTTNTFCGTTEYLAPE----VLL---DEK 172

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF 87
            Y   VD +S G++++E+     PF
Sbjct: 173 GYTKHVDFWSLGVLVFEMCCGWSPF 197

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 24/135 (17%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL  +   ++++D GLA + +  +   A  GT+ +MAPE+     L++G    Y
Sbjct: 123 LKPANILLD-EHGHVRISDLGLACDFS-KKKPHASVGTHGYMAPEV-----LQKGVA--Y 173

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH--------ARPGLPEDISPDL 116
           ++  D +S G +L++LL    PF              KH            LP+  SP+L
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKD-------KHEIDRMTLTMAVELPDSFSPEL 226

Query: 117 AFIVQSCWVEDPNLR 131
             +++     D N R
Sbjct: 227 RSLLEGLLQRDVNRR 241

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D   ++++D GLA      + +    GT  +MAPE+         + + Y
Sbjct: 128 LKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV--------KNERY 178

Query: 65  NNKVDVYSFGIVLWELLTNRLPFE 88
               D ++ G +L+E++  + PF+
Sbjct: 179 TFSPDWWALGCLLYEMIAGQSPFQ 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFG--LAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL      ++LADFG  L      T       GT  +++PE+   +   +  K 
Sbjct: 128 IKPDNVLLDK-NGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAM---EDGKG 183

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF 87
            Y  + D +S G+ ++E+L    PF
Sbjct: 184 RYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D+  ++++D GLA +    E +    GT  +MAPE+         EK  Y
Sbjct: 128 LKPENILLD-DRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVI------NNEK--Y 178

Query: 65  NNKVDVYSFGIVLWELLTNRLPF 87
               D +  G +++E++  + PF
Sbjct: 179 TFSPDWWGLGCLIYEMIQGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 1   MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           M + +K  N+L+   +  +KL DFG++  + +  M  +  GT  +M+PE        QG 
Sbjct: 126 MHRDVKPSNILVN-SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERL------QG- 176

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLP 86
             HY+ + D++S G+ L E+   R P
Sbjct: 177 -THYSVQSDIWSMGLSLVEMAIGRYP 201

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+      LKLADFGLAR   +     +AE  T  +  P++     L       
Sbjct: 125 LKPQNLLIN-KNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL------- 176

Query: 64  YNNKVDVYSFGIVLWEL 80
           Y+  +D++S G +  EL
Sbjct: 177 YSTSIDMWSAGCIFAEL 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 9/83 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL  +   ++++D GLA + +  +   A  GT+ +MAPE+     L++G    Y
Sbjct: 123 LKPANILLD-EHGHVRISDLGLACDFS-KKKPHASVGTHGYMAPEV-----LQKGTA--Y 173

Query: 65  NNKVDVYSFGIVLWELLTNRLPF 87
           ++  D +S G +L++LL    PF
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPF 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+L+T     +KLADFGLAR  +    +T    T  + APE+    T        Y
Sbjct: 134 LKPENILVT-SGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQST--------Y 184

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMS 91
              VD++S G +  E+   +  F G S
Sbjct: 185 ATPVDMWSVGCIFAEMFRRKPLFCGNS 211

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	99.98
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.98
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.97
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.97
KOG0198	313	consensus MEKK and related serine/threonine protei	99.97
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.97
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.97
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.97
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.97
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.97
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.96
PHA02988	283	hypothetical protein; Provisional	99.96
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.96
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
PTZ00036	440	glycogen synthase kinase; Provisional	99.96
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.96
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.96
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.96
KOG0605	550	consensus NDR and related serine/threonine kinases	99.96
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.95
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.95
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.95
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.95
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.95
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.95
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.95
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.95
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
PTZ00283	496	serine/threonine protein kinase; Provisional	99.95
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.94
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.94
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.94
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.94
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.94
KOG0589	426	consensus Serine/threonine protein kinase [General	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.94
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.94
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.94
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.94
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.94
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.94
PTZ00284	467	protein kinase; Provisional	99.94
KOG0584	632	consensus Serine/threonine protein kinase [General	99.94
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.94
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.94
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.94
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.94
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
PHA02882	294	putative serine/threonine kinase; Provisional	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.94
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
PHA03212	391	serine/threonine kinase US3; Provisional	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.94
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.94
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.93
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.93
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.93
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.93
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.93
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.93
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.93
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.93
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.93
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.93
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.93
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.93
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.93
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.93
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.93
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.93
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.93
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.93
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.93
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.93
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.93
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.93
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.93
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.93
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.93
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.93
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.93
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.93
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.93
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.93
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.93
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.93
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.93
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.93
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.93
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.93
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.93
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.92
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.92
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.92
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.92
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.92
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.92
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.92
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.92
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.92
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.92
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.92
PHA03209	357	serine/threonine kinase US3; Provisional	99.92
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.92
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.92
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.92
PHA03207	392	serine/threonine kinase US3; Provisional	99.92
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.92
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.92
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.92
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.92
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.92
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.92
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.92
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.92
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.92
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.92
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.92
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.92
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.92
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.92
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.92
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.92
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.92
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.92
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.92
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.92
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.92
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.92
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.92
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.92
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.92
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.92
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.92
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.92
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.92
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.92
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.92
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.92
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.92
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.91
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.91
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.91
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.91
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.91
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.91
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.91
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.91
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.91
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.91
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.91
PHA03211	461	serine/threonine kinase US3; Provisional	99.91
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.91
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.91
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.91
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.91
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.91
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.91
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.91
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.91
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.91
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.91
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.91
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.91
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.91
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.91
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.91
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.91
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.91
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.91
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.91
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.91
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.91
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.91
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.91
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.91
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.91
PHA03210	501	serine/threonine kinase US3; Provisional	99.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.91
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.91
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.91
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.91
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.91
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.91
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.91
KOG0610	459	consensus Putative serine/threonine protein kinase	99.91
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.91
PLN00009	294	cyclin-dependent kinase A; Provisional	99.91
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.91
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.91
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.91
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.91
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.91
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.91
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.9
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.9
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.9
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.9
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.9
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.9
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.9
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.9
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.9
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.9
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.9
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.9
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.9
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.9
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.9
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.9
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.9
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.9
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.9
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.9
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.9
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.9
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.9
KOG0586	596	consensus Serine/threonine protein kinase [General	99.9
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.9
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.9
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.9
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.9
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.9
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.9
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.9
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.9
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.9
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.9
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.9
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.9
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.9
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.9
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.9
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.9
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.9
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.9
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.9
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.9
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.9
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.89
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.89
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.89
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.89
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.89
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.89
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.89
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.89
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.89
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.89
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.89
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.89
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.89
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.89
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.89
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.89
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.89
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.89
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.89
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.89
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.89
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.89
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.89
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.89
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.89
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.88
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.88
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.88
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.88
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.88
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.88
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.88
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.88
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.88
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.87
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.87
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.87
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.87
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.87
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.87
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.87
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.87
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.86
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.86
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.86
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.86
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.86
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.85
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.84
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.84
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.84
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.84
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.83
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.83
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.83
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.83
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.81
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.81
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.78
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.75
KOG3653	534	consensus Transforming growth factor beta/activin	99.75
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.74
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.72
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.7
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.68
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.67
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.64
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.63
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.63
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.62
KOG1152	772	consensus Signal transduction serine/threonine kin	99.58
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.56
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.53
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.52
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.5
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.48
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.46
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.45
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.37
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.2
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.12
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.1
PRK12274	218	serine/threonine protein kinase; Provisional	98.91
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.86
PRK09188	365	serine/threonine protein kinase; Provisional	98.82
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.81
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.78
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.64
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.52
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.46
COG4248	637	Uncharacterized protein with protein kinase and he	98.33
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.02
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.02
smart00090	237	RIO RIO-like kinase.	97.87
PRK10345	210	hypothetical protein; Provisional	97.77
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.62
PRK14879	211	serine/threonine protein kinase; Provisional	97.56
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.54
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.48
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.42
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.18
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.08
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.99
KOG3087	229	consensus Serine/threonine protein kinase [General	96.92
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.08
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	95.79
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.62
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.47
PF01636	239	APH: Phosphotransferase enzyme family This family	95.1
PRK05231	319	homoserine kinase; Provisional	95.07
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.9
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	94.89
PRK10271	188	thiK thiamine kinase; Provisional	94.75
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	94.53
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.44
KOG1243	690	consensus Protein kinase [General function predict	94.42
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	94.4
PLN02236	344	choline kinase	94.27
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.22
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	94.18
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	93.96
KOG0576	829	consensus Mitogen-activated protein kinase kinase	93.88
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.87
COG2334	331	Putative homoserine kinase type II (protein kinase	93.77
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.75
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	92.94
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	92.41
KOG1290	590	consensus Serine/threonine protein kinase [Signal	91.99
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	91.55
PHA03111	444	Ser/Thr kinase; Provisional	91.09
KOG1093	725	consensus Predicted protein kinase (contains TBC a	90.78
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	90.78
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	90.76
COG0661	517	AarF Predicted unusual protein kinase [General fun	90.71
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	90.5
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	90.12
COG0478	304	RIO-like serine/threonine protein kinase fused to	90.11
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	90.09
PRK09550	401	mtnK methylthioribose kinase; Reviewed	89.93
PRK06148	1013	hypothetical protein; Provisional	88.85
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	88.68
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	87.99
PRK12396	409	5-methylribose kinase; Reviewed	87.61
PRK06149	972	hypothetical protein; Provisional	87.25
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	86.87
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	85.78
PRK11768	325	serine/threonine protein kinase; Provisional	85.72
PRK10593	297	hypothetical protein; Provisional	83.1
PLN02876	822	acyl-CoA dehydrogenase	82.91
KOG1235	538	consensus Predicted unusual protein kinase [Genera	82.33

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-37  Score=229.47  Aligned_cols=139  Identities=29%  Similarity=0.539  Sum_probs=119.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.. +.+||||||+++...++ ...+++||..||+||.+.+        ..|+.++||||||++++|+
T Consensus       201 IHRDIKPsNlLvNsk-GeVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g--------~~Ys~~sDIWSLGLsllE~  270 (364)
T KOG0581|consen  201 IHRDIKPSNLLVNSK-GEVKICDFGVSGILVNS-IANTFVGTSAYMSPERISG--------ESYSVKSDIWSLGLSLLEL  270 (364)
T ss_pred             eeccCCHHHeeeccC-CCEEeccccccHHhhhh-hcccccccccccChhhhcC--------CcCCcccceecccHHHHHH
Confidence            799999999999976 78999999999876665 5678999999999999965        6789999999999999999


Q ss_pred             HcCCCCCCCC----CcHHHHHHHHHccCCCCCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           81 LTNRLPFEGM----SNLQAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        81 ~~g~~p~~~~----~~~~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      ++|+.||...    ......+.......+|.+|.. +++++++|+.+||.+||.+||++.++++  |.|+.....+
T Consensus       271 a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~--Hpfi~~~~~~  344 (364)
T KOG0581|consen  271 AIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ--HPFIKKFEDP  344 (364)
T ss_pred             hhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc--CHHHhhcccc
Confidence            9999998763    234445566667788889987 9999999999999999999999999999  8887655533

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-33  Score=216.59  Aligned_cols=144  Identities=44%  Similarity=0.830  Sum_probs=123.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+..++||+|||+++....+ ...+...||..|||||++...      ...|+.|+||||||+++||
T Consensus       165 IHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~------~~~~~~K~DvySFgIvlWE  238 (362)
T KOG0192|consen  165 IHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGE------KSPYTEKSDVYSFGIVLWE  238 (362)
T ss_pred             eecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCC------CCcCCccchhhhHHHHHHH
Confidence            799999999999977338999999999865543 333447899999999999631      3579999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ++||..||.+...............++.+|..+++.+..++.+||..||..||++.+++..|+.+......
T Consensus       239 l~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  239 LLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            99999999998886666666678888999999999999999999999999999999999999988775443

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-33  Score=203.09  Aligned_cols=138  Identities=29%  Similarity=0.533  Sum_probs=118.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||+||+|||+|.. +++|+||||++....++...+...|++.|||||.+....     ...|+.++||||||++++|+
T Consensus       214 iHRDvKPSNILlDe~-GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~-----~~kYDiRaDVWSlGITlveL  287 (391)
T KOG0983|consen  214 IHRDVKPSNILLDER-GNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPD-----KPKYDIRADVWSLGITLVEL  287 (391)
T ss_pred             eecccCccceEEccC-CCEEeecccccceeecccccccccCCccccCccccCCCC-----CCccchhhhhhhhccchhhh
Confidence            799999999999976 789999999998777777667788999999999986421     45688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCC--CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPED--ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +||+.||.+.+.......+.....+|.+|..  +++++.+|+..||..|+.+||...++++  |.+..
T Consensus       288 aTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~--h~Fi~  353 (391)
T KOG0983|consen  288 ATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE--HPFIK  353 (391)
T ss_pred             hcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc--Cccee
Confidence            9999999997766666666666666766654  7999999999999999999999999998  55543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-33  Score=203.79  Aligned_cols=129  Identities=32%  Similarity=0.491  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||.||+|+.+ +.+||+|||+++....... ..+.+|||.||+||++..        ..|+.++||||+||++||
T Consensus       150 mHRDIKPaNIFl~~~-gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~--------~~Y~~kSDiWslGCllyE  220 (375)
T KOG0591|consen  150 MHRDIKPANIFLTAN-GVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHE--------SGYNFKSDIWSLGCLLYE  220 (375)
T ss_pred             eeccCcchheEEcCC-CceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhc--------CCCCcchhHHHHHHHHHH
Confidence            699999999999977 7899999999997655443 456799999999999964        789999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCC-CCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLP-EDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |+.-++||.+.+ ...+........-+++| +.++.++..++..|+..||..||+.-.+++
T Consensus       221 McaL~~PF~g~n-~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~  280 (375)
T KOG0591|consen  221 MCALQSPFYGDN-LLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ  280 (375)
T ss_pred             HHhcCCCccccc-HHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence            999999999874 33333333344555677 668999999999999999999998544444

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=9.7e-33  Score=216.96  Aligned_cols=138  Identities=33%  Similarity=0.549  Sum_probs=118.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||.+|||++.+ +.+||+|||++....... ...+.+||++|||||++.        ...|++++||||||++.+|
T Consensus       391 iHrDIKSDnILL~~~-g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvt--------rk~YG~KVDIWSLGIMaIE  461 (550)
T KOG0578|consen  391 IHRDIKSDNILLTMD-GSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVT--------RKPYGPKVDIWSLGIMAIE  461 (550)
T ss_pred             eeeccccceeEeccC-CcEEEeeeeeeeccccccCccccccCCCCccchhhhh--------hcccCccccchhhhhHHHH
Confidence            799999999999988 679999999998654433 456789999999999985        4789999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |+.|.+||..+.+..+.+.+...+.+ ...++.+++.+++|+.+||+.|+.+|+++.|+|+  |.++....
T Consensus       462 MveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~--HpFl~~a~  530 (550)
T KOG0578|consen  462 MVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE--HPFLKMAK  530 (550)
T ss_pred             HhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc--ChhhhhcC
Confidence            99999999998888888776544322 3557889999999999999999999999999999  77774433

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.98  E-value=9.4e-34  Score=215.43  Aligned_cols=140  Identities=28%  Similarity=0.397  Sum_probs=111.5

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||||..+  ...+||+|||+|+..+....+.+.|||+.|.|||++.+..     ...+..++|+||+||++|
T Consensus       298 ~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg-----~~~~~~kVDiWSlGcvLf  372 (475)
T KOG0615|consen  298 IHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKG-----VEYYPSKVDIWSLGCVLF  372 (475)
T ss_pred             ccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCC-----eecccchheeeeccceEE
Confidence            699999999999754  2468999999999888778889999999999999986521     233345899999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHcc---CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKH---ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      -+++|.+||++.........+...+   .-+.....++++..+||.+||..||++||+++|+|+  |.|+..
T Consensus       373 vcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~--hpW~~~  442 (475)
T KOG0615|consen  373 VCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN--HPWFKD  442 (475)
T ss_pred             EEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc--Chhhhc
Confidence            9999999998766433222222211   223345568999999999999999999999999999  777763

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3.9e-32  Score=216.99  Aligned_cols=139  Identities=27%  Similarity=0.463  Sum_probs=119.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|+||+.. +++||+|||+|..........+.||++.|++||++.+       ..+.+.++||||+|+++|.+
T Consensus       134 cHRDLKpENlLLd~~-~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G-------~pYdG~~sDVWSCGVILfAL  205 (786)
T KOG0588|consen  134 CHRDLKPENLLLDVK-NNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSG-------RPYDGRPSDVWSCGVILFAL  205 (786)
T ss_pred             eeccCCchhhhhhcc-cCEeeeccceeecccCCccccccCCCcccCCchhhcC-------CCCCCCccccchhHHHHHHH
Confidence            599999999999977 5599999999998888888999999999999999976       34446799999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      ++|+.||.+.+ ...++ .........+|..+++++++|+.+|+..||+.|.|.+||++  |.|+......
T Consensus       206 LtG~LPFdDdN-ir~LL-lKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k--HP~l~g~~~~  272 (786)
T KOG0588|consen  206 LTGKLPFDDDN-IRVLL-LKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILK--HPFLSGYTSL  272 (786)
T ss_pred             HhCCCCCCCcc-HHHHH-HHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhh--CchhhcCCCC
Confidence            99999998644 34433 33456678889999999999999999999999999999999  8887755443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=9.8e-32  Score=212.89  Aligned_cols=137  Identities=26%  Similarity=0.436  Sum_probs=115.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||-.|++|+.+ .++||+|||||.... ......+.|||+.|.|||++..        ...+..+||||+||++|.
T Consensus       140 iHRDLKLGNlfL~~~-~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k--------~gHsfEvDiWSlGcvmYt  210 (592)
T KOG0575|consen  140 IHRDLKLGNLFLNEN-MNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNK--------SGHSFEVDIWSLGCVMYT  210 (592)
T ss_pred             eecccchhheeecCc-CcEEecccceeeeecCcccccceecCCCcccChhHhcc--------CCCCCchhhhhhhhHHHh
Confidence            799999999999976 789999999997654 3356678999999999999863        667899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ++.|++||+... ... ....+......+|..++.++.+||..+|..||.+|||+++++.  +.++.....
T Consensus       211 LL~G~PPFetk~-vke-ty~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~--h~Ff~~g~~  277 (592)
T KOG0575|consen  211 LLVGRPPFETKT-VKE-TYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD--HPFFKSGFT  277 (592)
T ss_pred             hhhCCCCcccch-HHH-HHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc--CHhhhCCCc
Confidence            999999998643 222 2334456667788999999999999999999999999999999  888854433

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-31  Score=201.53  Aligned_cols=129  Identities=30%  Similarity=0.456  Sum_probs=104.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC-cccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||||||||+.+ ++++|+|||+++.. .......+.|||+.|||||++..        ..|+..+|+||+|+++||
T Consensus       147 iyRDlKPENILLd~~-GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~--------~gy~~~vDWWsLGillYe  217 (357)
T KOG0598|consen  147 IYRDLKPENILLDEQ-GHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLG--------KGYDKAVDWWSLGILLYE  217 (357)
T ss_pred             eeccCCHHHeeecCC-CcEEEeccccchhcccCCCccccccCCccccChHHHhc--------CCCCcccchHhHHHHHHH
Confidence            799999999999977 89999999999844 33344566899999999999864        689999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC----CHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP----SFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp----s~~~~l~  139 (198)
                      |++|.+||.+.+...-. ........+..|..++.+.++++.++|..||.+|.    ++.++..
T Consensus       218 ML~G~pPF~~~~~~~~~-~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~  280 (357)
T KOG0598|consen  218 MLTGKPPFYAEDVKKMY-DKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR  280 (357)
T ss_pred             HhhCCCCCcCccHHHHH-HHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence            99999999987643322 22222333555666999999999999999999995    4666555

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=7.5e-32  Score=204.44  Aligned_cols=141  Identities=26%  Similarity=0.475  Sum_probs=112.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc----cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV----TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+++.+||+|||+++....    ........||+.|||||++..       ......++||||+||+
T Consensus       139 vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~-------g~~~~~~sDiWSlGCt  211 (313)
T KOG0198|consen  139 VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRN-------GEVARRESDIWSLGCT  211 (313)
T ss_pred             eccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcC-------CCcCCccchhhhcCCE
Confidence            79999999999997346899999999875442    112234689999999999852       1122358999999999


Q ss_pred             HHHHHcCCCCCCC-CCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           77 LWELLTNRLPFEG-MSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        77 l~e~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      +.||+||..||.. ................|.+|..+++++.+|+.+|+..||.+||||.++++  +.++.....
T Consensus       212 VvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~--hpf~~~~~~  284 (313)
T KOG0198|consen  212 VVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE--HPFLKQNSI  284 (313)
T ss_pred             EEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhh--Chhhhcccc
Confidence            9999999999987 44445555666566667899999999999999999999999999999999  666655443

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=208.68  Aligned_cols=129  Identities=23%  Similarity=0.403  Sum_probs=108.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--------------cccCCCCccceecccccccccccccccCCCCc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--------------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNN   66 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~   66 (198)
                      ||||||||||||+.| +++||.|||-++......              ...+++||..|.+||++..        ...++
T Consensus       196 IHRDlKPENILLd~d-mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~--------~~~~~  266 (604)
T KOG0592|consen  196 IHRDLKPENILLDKD-GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND--------SPAGP  266 (604)
T ss_pred             eeccCChhheeEcCC-CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcC--------CCCCc
Confidence            799999999999987 889999999998442211              1145789999999999863        67788


Q ss_pred             hhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           67 KVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        67 ~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      .+|+|+|||++|+|+.|.+||.+.++....  +.+......+|+.+++.+.+|+.++|..||.+|.+.++|.++
T Consensus       267 ~sDiWAlGCilyQmlaG~PPFra~NeyliF--qkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  267 SSDLWALGCILYQMLAGQPPFRAANEYLIF--QKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             ccchHHHHHHHHHHhcCCCCCccccHHHHH--HHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            999999999999999999999987754332  233456677899999999999999999999999999999884

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=205.16  Aligned_cols=134  Identities=32%  Similarity=0.546  Sum_probs=112.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||+.|||+..+ +.+||+|||++........ ..+.+||+.|||||++.+        ..|+.++||||||++.+|
T Consensus       133 iHrDIKaanil~s~~-g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~--------~~Y~~KADIWSLGITaiE  203 (467)
T KOG0201|consen  133 IHRDIKAANILLSES-GDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQ--------SGYDTKADIWSLGITAIE  203 (467)
T ss_pred             ecccccccceeEecc-CcEEEEecceeeeeechhhccccccccccccchhhhcc--------ccccchhhhhhhhHHHHH
Confidence            799999999999987 7899999999986654433 367899999999999964        679999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++|.+|+....++...+. .-+..+|.+...+++.+.+|+..||.+||+.||+|.++++  |.++.
T Consensus       204 la~GePP~s~~hPmrvlfl-Ipk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK--h~FIk  267 (467)
T KOG0201|consen  204 LAKGEPPHSKLHPMRVLFL-IPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK--HKFIK  267 (467)
T ss_pred             HhcCCCCCcccCcceEEEe-ccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh--hHHHH
Confidence            9999999988776443322 2234555566678999999999999999999999999998  55554

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=6.4e-31  Score=205.63  Aligned_cols=137  Identities=34%  Similarity=0.630  Sum_probs=115.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc--CCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT--AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||...|||++.+ ..+||+|||+++...++....  ...-...|.|||.+.        .+.|+.++||||||+++|
T Consensus       325 IHRDLAARNiLV~~~-~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~--------~~~FS~kSDVWSFGVlL~  395 (468)
T KOG0197|consen  325 IHRDLAARNILVDED-LVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALN--------YGKFSSKSDVWSFGVLLW  395 (468)
T ss_pred             cchhhhhhheeeccC-ceEEEcccccccccCCCceeecCCCCCCceecCHHHHh--------hCCcccccceeehhhhHH
Confidence            899999999999977 789999999999554433211  123357899999986        377999999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++| |+.||.++.. ......+..+.+.+.|+.+++++.++|..||..+|++||||+.+...|+++...
T Consensus       396 E~fT~G~~py~~msn-~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  396 ELFTYGRVPYPGMSN-EEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             HHhccCCCCCCCCCH-HHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            9997 8889888765 445567778899999999999999999999999999999999999988887543

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.97  E-value=7.2e-31  Score=193.19  Aligned_cols=131  Identities=31%  Similarity=0.449  Sum_probs=108.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||||||||..+ +.+||||||+|+... ....++.++.|.+|.|||.+.+       ...|+..+|||+.||++.|
T Consensus       123 IHRDIKPENILit~~-gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvG-------DtqYG~pVDiWAiGCv~aE  194 (396)
T KOG0593|consen  123 IHRDIKPENILITQN-GVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVG-------DTQYGKPVDIWAIGCVFAE  194 (396)
T ss_pred             ecccCChhheEEecC-CcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcc-------cCcCCCcccchhhhHHHHH
Confidence            799999999999987 789999999999765 5566778899999999999875       5678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-------------------CCCCCC----------CCCcHHHHHHHHHhcccCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-------------------ARPGLP----------EDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-------------------~~~~~p----------~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      |++|.+.|.|....++.+.+...-                   ...+.|          ..++.-+.+|+.+||..||++
T Consensus       195 l~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~  274 (396)
T KOG0593|consen  195 LLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDD  274 (396)
T ss_pred             HhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccc
Confidence            999999999988887776543311                   111111          123556889999999999999


Q ss_pred             CCCHHHHHH
Q 029154          131 RPSFSQIIR  139 (198)
Q Consensus       131 Rps~~~~l~  139 (198)
                      |++.++++.
T Consensus       275 R~sc~qll~  283 (396)
T KOG0593|consen  275 RLSCEQLLH  283 (396)
T ss_pred             cccHHHHhc
Confidence            999999887

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-31  Score=191.68  Aligned_cols=132  Identities=25%  Similarity=0.459  Sum_probs=112.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||+||+|||++.. +.+||||||++....++-..+...|+..|||||.+..      ....|+.++|+||+|+++||+
T Consensus       190 IHRDvKPSNILldr~-G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p------~~~gyDiRSDvWSLGITL~Ev  262 (361)
T KOG1006|consen  190 IHRDVKPSNILLDRH-GDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDP------SDKGYDIRSDVWSLGITLYEV  262 (361)
T ss_pred             hhccCChhheEEecC-CCEeeecccchHhHHHHHHhhhccCCccccChhccCC------ccCCcchhhhhhhhcceEeee
Confidence            799999999999987 6799999999988776666667789999999999865      234689999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC--C---CCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP--E---DISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~---~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      .||..||.+.............+.++.+.  .   .++..+..++..||..|-++||++.++++
T Consensus       263 AtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  263 ATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             ecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            99999999888766666666555555442  2   26788999999999999999999999987

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.4e-30  Score=189.64  Aligned_cols=141  Identities=21%  Similarity=0.335  Sum_probs=113.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ .++||+|||++............|||++|+|||.+.+.+.-  ....|+..+|.|++|+++|.+
T Consensus       145 VHRDLKpENILlddn-~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e--~~pGYs~EVD~Wa~GVImyTL  221 (411)
T KOG0599|consen  145 VHRDLKPENILLDDN-MNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYE--NHPGYSKEVDEWACGVIMYTL  221 (411)
T ss_pred             hhcccChhheeeccc-cceEEeccceeeccCCchhHHHhcCCCcccChhheeeeccc--CCCCccchhhHHHHHHHHHHH
Confidence            699999999999966 78999999999887777777889999999999999775532  235678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC--CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR--PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +.|.+||.....+.-...++.....  .+...+++.+..+|+.+||+.||.+|.|++|.+.  |.|+.
T Consensus       222 LaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La--Hpff~  287 (411)
T KOG0599|consen  222 LAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA--HPFFI  287 (411)
T ss_pred             HcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc--ChHHH
Confidence            9999999754433323333322222  3345668999999999999999999999999998  66553

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.3e-30  Score=200.66  Aligned_cols=136  Identities=28%  Similarity=0.533  Sum_probs=114.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC-cccccccCCCCccceecccccccccccccccCCC-CchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY-NNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+.+.+||+|||++... .......+.+||+.|+|||++.+       ...| +.++||||+|+++|
T Consensus       142 ~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~-------~~~Y~g~~aDvWS~GViLy  214 (370)
T KOG0583|consen  142 VHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSG-------KGTYSGKAADVWSLGVILY  214 (370)
T ss_pred             eeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCC-------CCCcCCchhhhhhhHHHHH
Confidence            699999999999976467999999999876 45566788999999999999964       2214 57899999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCC-cHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      .|++|..||..... ...+. .+......+|..+ ++++..|+.+||..||.+|+++.+++.  +.|+..
T Consensus       215 ~ml~G~~PF~d~~~-~~l~~-ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~--h~w~~~  280 (370)
T KOG0583|consen  215 VLLCGRLPFDDSNV-PNLYR-KIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE--HPWFQK  280 (370)
T ss_pred             HHHhCCCCCCCccH-HHHHH-HHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh--Chhhcc
Confidence            99999999987443 22222 3556677888888 999999999999999999999999995  788775

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.8e-30  Score=197.17  Aligned_cols=136  Identities=28%  Similarity=0.444  Sum_probs=114.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      .||||||||||+... ..+||+|||+||.......++.++.|.+|.|||++..       ...|+.+.|+|++||+++|+
T Consensus       132 FHRDlKPENiLi~~~-~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLr-------s~~Ys~pvD~wA~GcI~aEl  203 (538)
T KOG0661|consen  132 FHRDLKPENILISGN-DVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLR-------SGYYSSPVDMWAVGCIMAEL  203 (538)
T ss_pred             ccccCChhheEeccc-ceeEecccccccccccCCCcchhhhcccccchHHhhh-------ccccCCchHHHHHHHHHHHH
Confidence            499999999999954 6799999999998887778889999999999999874       57899999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCC-----------------C-----------CCCCcHHHHHHHHHhcccCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPG-----------------L-----------PEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------~-----------p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      .+-++.|.|..+.++.+.++..-..|.                 +           -...++++..++.+||..||.+||
T Consensus       204 ~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRp  283 (538)
T KOG0661|consen  204 YSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRP  283 (538)
T ss_pred             HHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCc
Confidence            999999999988887766544322221                 1           122578899999999999999999


Q ss_pred             CHHHHHHHHHHHHh
Q 029154          133 SFSQIIRMLNAFLF  146 (198)
Q Consensus       133 s~~~~l~~l~~~~~  146 (198)
                      ||.+.++  +.+..
T Consensus       284 TA~~al~--~pffq  295 (538)
T KOG0661|consen  284 TASQALQ--HPFFQ  295 (538)
T ss_pred             cHHHHhc--Ccccc
Confidence            9999999  44443

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=3.8e-29  Score=190.78  Aligned_cols=135  Identities=24%  Similarity=0.400  Sum_probs=108.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++......  ....|+..|+|||++.+      ....++.++|||||||++||+
T Consensus       145 ~Hrdlkp~nill~~~-~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~------~~~~~~~k~Di~SlGvil~el  215 (283)
T PHA02988        145 PYKNLTSVSFLVTEN-YKLKIICHGLEKILSSPP--FKNVNFMVYFSYKMLND------IFSEYTIKDDIYSLGVVLWEI  215 (283)
T ss_pred             CCCcCChhhEEECCC-CcEEEcccchHhhhcccc--ccccCcccccCHHHhhh------ccccccchhhhhHHHHHHHHH
Confidence            599999999999976 689999999987543221  23568899999999743      124688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ++|..||.+................+..|..+++.+.+++.+||+.||.+||++.++++.|+.+
T Consensus       216 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        216 FTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             HHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            9999999876644333332234455566767899999999999999999999999999998865

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.8e-29  Score=188.39  Aligned_cols=142  Identities=27%  Similarity=0.378  Sum_probs=113.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|+|++.+ ..+||+|||+|+....   ....+..+.|.+|.|||++..       ...|+...||||.||++
T Consensus       147 iHRDLKPsNll~n~~-c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~-------~~~Yt~aiDiWSvGCI~  218 (359)
T KOG0660|consen  147 IHRDLKPSNLLLNAD-CDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLN-------SSEYTKAIDIWSVGCIL  218 (359)
T ss_pred             cccccchhheeeccC-CCEEeccccceeeccccCcccchhcceeeeeecCHHHHhc-------cccccchhhhhhhhHHH
Confidence            799999999999977 6799999999997643   334566788999999999864       57899999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccC------------------------CCCC-----CCCCcHHHHHHHHHhcccCC
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHA------------------------RPGL-----PEDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~------------------------~~~~-----p~~~~~~~~~l~~~~l~~dp  128 (198)
                      .||++|++.|.|.+...+.........                        .+..     ....++.+.+|+.+||..||
T Consensus       219 AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP  298 (359)
T KOG0660|consen  219 AEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDP  298 (359)
T ss_pred             HHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCc
Confidence            999999999998776554433221111                        1111     13468999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHhhcCCCC
Q 029154          129 NLRPSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       129 ~~Rps~~~~l~~l~~~~~~~~~~~  152 (198)
                      .+|+|++|.++  |..++....+.
T Consensus       299 ~kRita~eAL~--hPYl~~~hdp~  320 (359)
T KOG0660|consen  299 KKRITAEEALA--HPYLAPYHDPE  320 (359)
T ss_pred             cccCCHHHHhc--ChhhhhhcCCc
Confidence            99999999999  77877766553

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.5e-29  Score=193.13  Aligned_cols=137  Identities=30%  Similarity=0.534  Sum_probs=107.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc----c-cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT----E-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~----~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      ||||||+.||||+.+ |.|||+|||++.....+    . .+.+.+||++|||||++..      ....|+.|+||||||+
T Consensus       148 IHRdvKAgnILi~~d-G~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q------~~~GYdfKaDIwSfGI  220 (516)
T KOG0582|consen  148 IHRDVKAGNILIDSD-GTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQ------QLHGYDFKADIWSFGI  220 (516)
T ss_pred             eecccccccEEEcCC-CcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhh------cccCccchhhhhhhhH
Confidence            799999999999977 78999999987633211    1 1256799999999999654      4578999999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccCCC-----CCC----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHARP-----GLP----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +..|+.+|..||....++.-+...+. ..+|     .++    ..++..++.++..||+.||.+|||++++++  +.|+.
T Consensus       221 TA~ELA~G~aPf~k~pPmkvLl~tLq-n~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk--h~FFk  297 (516)
T KOG0582|consen  221 TACELAHGHAPFSKYPPMKVLLLTLQ-NDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK--HAFFK  297 (516)
T ss_pred             HHHHHhcCCCCcccCChHHHHHHHhc-CCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc--cHHHh
Confidence            99999999999998877666555443 2222     111    114567889999999999999999999999  66665


Q ss_pred             h
Q 029154          147 T  147 (198)
Q Consensus       147 ~  147 (198)
                      .
T Consensus       298 ~  298 (516)
T KOG0582|consen  298 K  298 (516)
T ss_pred             h
Confidence            3

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-29  Score=181.37  Aligned_cols=174  Identities=22%  Similarity=0.382  Sum_probs=127.6

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      ||||+||+|+||....  -.+||+|||++............+||+.||+||++.        ...|+..+|||++|+++|
T Consensus       132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvr--------kdpy~kpvDiW~cGViLf  203 (355)
T KOG0033|consen  132 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLK--------KDPYSKPVDIWACGVILY  203 (355)
T ss_pred             eeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhh--------cCCCCCcchhhhhhHHHH
Confidence            7999999999996432  348999999998776655566789999999999985        368899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHcc---CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKH---ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSV  155 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~~~~  155 (198)
                      -++.|.+||.+..... .+......   .+++..+.+++++.+|+++||..||++|.|+.|.++  |.|+.....-....
T Consensus       204 iLL~G~~PF~~~~~~r-lye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~--HpWi~~r~~~As~~  280 (355)
T KOG0033|consen  204 ILLVGYPPFWDEDQHR-LYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK--HPWICNRERVASAI  280 (355)
T ss_pred             HHHhCCCCCCCccHHH-HHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC--CchhcchHHHHHHh
Confidence            9999999999865433 33332222   222344568999999999999999999999999999  77776544322111


Q ss_pred             CCCcchhhhccCCCccchhhHhhhhhHHHHHHHHHHh
Q 029154          156 PESDTNEAAATSNGAMTEFSARARGKFAFLRQLFTAK  192 (198)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (198)
                      ...       ..-.-+..+.++.+-+.+.|......+
T Consensus       281 H~~-------dtvd~lrkfNarRKLKgavLtav~s~r  310 (355)
T KOG0033|consen  281 HRQ-------DTVDCLKKFNARRKLKGAILTTVIATR  310 (355)
T ss_pred             hhH-------HHHHHHHHhhHHHHHHHHHHHHHHhcc
Confidence            110       011124556677777777776665544

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=6.5e-29  Score=193.80  Aligned_cols=137  Identities=31%  Similarity=0.609  Sum_probs=108.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....++..|+|||++.+        ..++.++|||||||++
T Consensus       196 vHrDiKp~Nil~~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDiwslG~il  266 (338)
T cd05102         196 IHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD--------KVYTTQSDVWSFGVLL  266 (338)
T ss_pred             ECCCCccceEEEcCC-CcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc--------CCCCcccCHHHHHHHH
Confidence            699999999999976 6799999999975432211   122345678999998753        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |||++ |..||.+...................+..+++++.+++.+||..||.+||++.++++.|+.++.
T Consensus       267 ~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         267 WEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            99996 9999987554333333334444555677889999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.96  E-value=5.2e-29  Score=200.56  Aligned_cols=141  Identities=22%  Similarity=0.323  Sum_probs=108.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+++.+||+|||+++...........+||+.|+|||++.+       ...++.++||||+||++|||
T Consensus       192 iHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwSlGvil~el  264 (440)
T PTZ00036        192 CHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLG-------ATNYTTHIDLWSLGCIIAEM  264 (440)
T ss_pred             ecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcC-------CCCCCcHHHHHHHHHHHHHH
Confidence            69999999999987655799999999986543333345678999999998753       24678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC---------------------------CCCCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR---------------------------PGLPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ++|.+||.+................                           ..+|...++++.+|+.+||..||.+|||
T Consensus       265 ltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t  344 (440)
T PTZ00036        265 ILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN  344 (440)
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC
Confidence            9999999887654433222110000                           0123456789999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCC
Q 029154          134 FSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~  150 (198)
                      +.++++  +.|+.....
T Consensus       345 a~e~l~--hp~f~~~~~  359 (440)
T PTZ00036        345 PIEALA--DPFFDDLRD  359 (440)
T ss_pred             HHHHhC--ChhHHhhhc
Confidence            999998  777766544

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.96  E-value=3.4e-30  Score=203.42  Aligned_cols=133  Identities=30%  Similarity=0.642  Sum_probs=113.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||||.-||||..+ ..|||+|||-++...+....-.++||..|||||++.        +...+.|+||||||+++|||
T Consensus       234 IHRDLKSPNiLIs~~-d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIr--------nePcsEKVDIwSfGVVLWEm  304 (904)
T KOG4721|consen  234 IHRDLKSPNILISYD-DVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIR--------NEPCSEKVDIWSFGVVLWEM  304 (904)
T ss_pred             hhhccCCCceEeecc-ceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhh--------cCCcccccceehhHHHHHHH
Confidence            799999999999977 679999999998655544445689999999999995        47789999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +||..||.........+.........++|..+++.+.-|++.||.-.|..||+|.+++.+|.
T Consensus       305 LT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  305 LTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             HhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence            99999998766544444333334556778999999999999999999999999999999885

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.96  E-value=2.1e-29  Score=184.80  Aligned_cols=118  Identities=26%  Similarity=0.438  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |+|||||||||||.+ +++||.|||+|+.....  ..+.|||+.|+|||++..        ..|+.++|+|+||+++|||
T Consensus       166 iYRDLKPENiLlD~~-G~iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~s--------k~ynkavDWWalGVLIYEM  234 (355)
T KOG0616|consen  166 IYRDLKPENLLLDQN-GHIKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQS--------KGYNKAVDWWALGVLIYEM  234 (355)
T ss_pred             eeccCChHHeeeccC-CcEEEEeccceEEecCc--EEEecCCccccChHHhhc--------CCCCcchhHHHHHHHHHHH
Confidence            579999999999987 78999999999876543  457899999999999864        7889999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      +.|.+||....+....  ..+......+|..+++++.+|+.++|+.|-.+|
T Consensus       235 laG~pPF~~~~~~~iY--~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  235 LAGYPPFYDDNPIQIY--EKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HcCCCCCcCCChHHHH--HHHHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence            9999999987774432  334456677899999999999999999999999

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=3.9e-29  Score=190.14  Aligned_cols=137  Identities=29%  Similarity=0.461  Sum_probs=110.6

Q ss_pred             CCCCCCCCCeEEcCC--C---CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--Q---KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~---~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+||||...  .   -.+||+|||+|+.........+.||++.|||||++.        .+.|+.|+|+||.|+
T Consensus       131 iHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~--------~~~YdAKADLWSiG~  202 (429)
T KOG0595|consen  131 IHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIM--------SQQYDAKADLWSIGT  202 (429)
T ss_pred             eeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHH--------hccccchhhHHHHHH
Confidence            799999999999864  1   248999999999888777778899999999999985        378999999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHc-cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|+|++|+.||............... ...+..+...+..+.+++...+..++.+|-++.+...  +.++..
T Consensus       203 Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~--~~~l~~  273 (429)
T KOG0595|consen  203 ILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFD--HPFLAA  273 (429)
T ss_pred             HHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhh--hhhccc
Confidence            999999999999987754443322222 2334455667888889999999999999998887766  555543

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.96  E-value=4e-29  Score=195.59  Aligned_cols=135  Identities=24%  Similarity=0.395  Sum_probs=104.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---------------c---------c----------------------
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---------------T---------E----------------------   34 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---------------~---------~----------------------   34 (198)
                      |||||||+|+|||.. |++||+||||+.....               .         .                      
T Consensus       263 IHRDIKPdNlLiD~~-GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nr  341 (550)
T KOG0605|consen  263 IHRDIKPDNLLIDAK-GHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNR  341 (550)
T ss_pred             ccccCChhheeecCC-CCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhh
Confidence            799999999999987 8999999999851100               0         0                      


Q ss_pred             --cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--C
Q 029154           35 --MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--E  110 (198)
Q Consensus        35 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~  110 (198)
                        .....+|||-|+|||++.+        ..|+..+|+||+||++|||+.|.+||.+...................|  .
T Consensus       342 r~~a~StVGTPDYiAPEVll~--------kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~  413 (550)
T KOG0605|consen  342 RQLAYSTVGTPDYIAPEVLLG--------KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEV  413 (550)
T ss_pred             hhhhhcccCCccccchHHHhc--------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcC
Confidence              0012379999999999975        668999999999999999999999999988766554443333334444  3


Q ss_pred             CCcHHHHHHHHHhcccCCCCCC---CHHHHHHHHHHHHhh
Q 029154          111 DISPDLAFIVQSCWVEDPNLRP---SFSQIIRMLNAFLFT  147 (198)
Q Consensus       111 ~~~~~~~~l~~~~l~~dp~~Rp---s~~~~l~~l~~~~~~  147 (198)
                      .+++++++||.+||. ||.+|.   .++||.+  |.|+..
T Consensus       414 ~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~--HPfF~~  450 (550)
T KOG0605|consen  414 DLSDEAKDLITRLLC-DPENRLGSKGAEEIKK--HPFFKG  450 (550)
T ss_pred             cccHHHHHHHHHHhc-CHHHhcCcccHHHHhc--CCcccc
Confidence            478999999999998 999995   5778877  666543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.95  E-value=2e-28  Score=184.11  Aligned_cols=143  Identities=27%  Similarity=0.349  Sum_probs=117.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      .||||||+|||+|.+.+.+||||||.|+....+....+.++|..|.|||.+.+       ...|+.+.||||.||++.||
T Consensus       147 cHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifg-------a~~Yt~~IDiWSaGCV~aEL  219 (364)
T KOG0658|consen  147 CHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFG-------ATEYTTSIDIWSAGCVMAEL  219 (364)
T ss_pred             ccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcC-------ccccCceeEEhhhhHHHHHH
Confidence            59999999999999989999999999997766666667789999999999876       46799999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCC------------------C---------CCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARP------------------G---------LPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~------------------~---------~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      +.|++.|.|.....+...+..--..|                  .         +....+++..+|+.++|.++|.+|.+
T Consensus       220 l~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~  299 (364)
T KOG0658|consen  220 LKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS  299 (364)
T ss_pred             hcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC
Confidence            99999999987766554332211110                  0         12346899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCC
Q 029154          134 FSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~~~  152 (198)
                      +.|++.  +.+...+..+.
T Consensus       300 ~~~~l~--h~fFdelr~~~  316 (364)
T KOG0658|consen  300 ALEALA--HPFFDELRDPN  316 (364)
T ss_pred             HHHHhc--chhhHHhhCcC
Confidence            999999  78877776653

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.9e-28  Score=191.85  Aligned_cols=141  Identities=22%  Similarity=0.397  Sum_probs=120.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|+.+-..-+-+||.|||++-.+.......+.||+..|-|||++.+       ..+..+++||||+|+++|-+
T Consensus       140 VHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLG-------DsYDAPAVDiWSLGVILyML  212 (864)
T KOG4717|consen  140 VHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLG-------DSYDAPAVDIWSLGVILYML  212 (864)
T ss_pred             hcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhc-------CccCCcchhhhHHHHHHHHH
Confidence            79999999998876667899999999987777777889999999999999976       34446789999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~  152 (198)
                      ++|++||+..+....+  .++..+...+|..++.++++||..||..||.+|.+.+++..  ..|+.....+.
T Consensus       213 VCGq~PFqeANDSETL--TmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s--~~Wlq~~D~~~  280 (864)
T KOG4717|consen  213 VCGQPPFQEANDSETL--TMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS--TSWLQAGDRGL  280 (864)
T ss_pred             HhCCCccccccchhhh--hhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc--cccccCCCCCc
Confidence            9999999876654443  34456788889999999999999999999999999999998  77877665543

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.8e-29  Score=200.84  Aligned_cols=138  Identities=30%  Similarity=0.556  Sum_probs=118.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc-cCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR-EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||.+|+|++.-.+.+||+|||-++ ..+.+.+..++.||..|||||++..      ....|+.++|||||||++.|
T Consensus       697 VHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDq------G~RGYG~aADIWS~GCT~vE  770 (1226)
T KOG4279|consen  697 VHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQ------GPRGYGKAADIWSFGCTMVE  770 (1226)
T ss_pred             eeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhcc------CCcCCCchhhhhhccceeEe
Confidence            7999999999999777889999999986 4456667778899999999999976      35789999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHH-HHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAA-YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |.||++||......+.. +...+-...|++|+.++.++.+++.+|+..||.+||++.++++  ..++.
T Consensus       771 MATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~--DpFlq  836 (1226)
T KOG4279|consen  771 MATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ--DPFLQ  836 (1226)
T ss_pred             eccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc--Ccccc
Confidence            99999999876655544 3444455678899999999999999999999999999999998  66654

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.95  E-value=1.3e-27  Score=173.02  Aligned_cols=141  Identities=28%  Similarity=0.383  Sum_probs=111.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||.|+|++.+ +.+||+|||+++.... +......+-|.+|.|||.+.+       .+.|+..+|+||.||++.|
T Consensus       123 lHRDlKPnNLLis~~-g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfG-------sr~Yg~~VDmWavGCI~AE  194 (318)
T KOG0659|consen  123 LHRDLKPNNLLISSD-GQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFG-------SRQYGTGVDMWAVGCIFAE  194 (318)
T ss_pred             hcccCCccceEEcCC-CcEEeecccchhccCCCCcccccceeeeeccChHHhcc-------chhcCCcchhhhHHHHHHH
Confidence            699999999999977 7899999999996653 333444578999999999876       5789999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--C------------------------CCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--G------------------------LPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~------------------------~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ++-|.+-|.|....++.......-..|  .                        +....+.++.+|+.++|..||.+|.+
T Consensus       195 Lllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit  274 (318)
T KOG0659|consen  195 LLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT  274 (318)
T ss_pred             HHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc
Confidence            999999999988777654432211111  1                        11224677899999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCC
Q 029154          134 FSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~~  151 (198)
                      +.|+++  +.++...+.+
T Consensus       275 a~qaL~--~~yf~~~P~p  290 (318)
T KOG0659|consen  275 ASQALK--HPYFKSLPLP  290 (318)
T ss_pred             HHHHhc--chhhhcCCCC
Confidence            999999  7777665444

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.4e-28  Score=193.79  Aligned_cols=138  Identities=30%  Similarity=0.535  Sum_probs=114.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||..|||+..+ |.++|+|||++...... ....+++||++|||||+..+.++   ...+|++++||||||+++.|
T Consensus       152 IHRDLKAGNiL~Tld-GdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~---KD~PYDykaDiWSlGITLIE  227 (1187)
T KOG0579|consen  152 IHRDLKAGNILLTLD-GDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETF---KDQPYDYKADIWSLGITLIE  227 (1187)
T ss_pred             hhhhccccceEEEec-CcEeeecccccccchhHHhhhccccCCcccccchheeeccc---cCCCchhhhhHHhhhhHHHH
Confidence            799999999999988 67999999998644322 23456899999999999877553   46899999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |..+.+|....+.+....... ...+|  -.|..++..+.+|+.+||..||..||+++++++  |.|+
T Consensus       228 MAqiEPPHhelnpMRVllKia-KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~--Hpfv  292 (1187)
T KOG0579|consen  228 MAQIEPPHHELNPMRVLLKIA-KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK--HPFV  292 (1187)
T ss_pred             HhccCCCccccchHHHHHHHh-hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh--Cccc
Confidence            999999998888776654443 23333  457789999999999999999999999999998  4444

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.95  E-value=3.9e-28  Score=191.56  Aligned_cols=133  Identities=30%  Similarity=0.498  Sum_probs=110.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|||+||.||||+.. +.+|+||||+++.+..+. ..+...||+.|||||++.        .+.|+..+|+||+||++||
T Consensus       122 lhrd~kPqniLl~~~-~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~--------e~pyd~~sDlWslGcilYE  192 (808)
T KOG0597|consen  122 LHRDMKPQNILLEKG-GTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVE--------EQPYDHTSDLWSLGCILYE  192 (808)
T ss_pred             ccccCCcceeeecCC-CceeechhhhhhhcccCceeeeeccCcccccCHHHHc--------CCCccchhhHHHHHHHHHH
Confidence            599999999999976 789999999999665443 345578999999999985        4889999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++.|++||....-.. . ...+...++..|..++.++.+|+..+|.+||.+|.+..+++.  |.+..
T Consensus       193 ~~~G~PPF~a~si~~-L-v~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~--HpF~k  255 (808)
T KOG0597|consen  193 LYVGQPPFYARSITQ-L-VKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG--HPFWK  255 (808)
T ss_pred             HhcCCCCchHHHHHH-H-HHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc--ChHHh
Confidence            999999998644322 2 223344555667789999999999999999999999999998  55543

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.1e-28  Score=194.14  Aligned_cols=128  Identities=27%  Similarity=0.452  Sum_probs=109.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |+||||-+|||||.+ |++||+|||+++... .....++.|||+.|||||++.+        ..|+..+|+|+||+++||
T Consensus       490 IYRDlKLdNiLLD~e-Gh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e--------~~Yt~aVDWW~lGVLlye  560 (694)
T KOG0694|consen  490 IYRDLKLDNLLLDTE-GHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTE--------QSYTRAVDWWGLGVLLYE  560 (694)
T ss_pred             eeeecchhheEEccc-CcEEecccccccccCCCCCccccccCChhhcChhhhcc--------CcccchhhHHHHHHHHHH
Confidence            689999999999988 789999999998433 4445678999999999999964        789999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~  139 (198)
                      |+.|+.||.+.+...  ....+....+..|..++.+..++++++|..+|.+|..     +.+|.+
T Consensus       561 ML~Gq~PF~gddEee--~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~  623 (694)
T KOG0694|consen  561 MLVGESPFPGDDEEE--VFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKK  623 (694)
T ss_pred             HHcCCCCCCCCCHHH--HHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhh
Confidence            999999999877533  3344456677789999999999999999999999964     556665

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.95  E-value=4.8e-28  Score=184.80  Aligned_cols=135  Identities=21%  Similarity=0.363  Sum_probs=105.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||++.............|+..|+|||++.+        ..++.++||||+||++|+|
T Consensus       124 iH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DvwslGvil~el  194 (285)
T cd05631         124 VYRDLKPENILLDDR-GHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINN--------EKYTFSPDWWGLGCLIYEM  194 (285)
T ss_pred             EeCCCCHHHEEECCC-CCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcC--------CCCCcccCchhHHHHHHHH
Confidence            699999999999966 6799999999976443333345678999999999853        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHH--HHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQ--AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|+.||.+.....  ..............+..+++++.+|+.+||..||.+||+     ++++++  +.|+.
T Consensus       195 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~--h~~~~  265 (285)
T cd05631         195 IQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ--HPIFK  265 (285)
T ss_pred             HhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc--CHhhc
Confidence            99999998654321  112222233344556778999999999999999999997     788887  55543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.95  E-value=1.9e-27  Score=187.99  Aligned_cols=136  Identities=30%  Similarity=0.556  Sum_probs=105.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....++..|+|||++..        ..++.++|||||||++
T Consensus       234 iHrDLkp~Nil~~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwSlGvil  304 (374)
T cd05106         234 IHRDVAARNVLLTDG-RVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD--------CVYTVQSDVWSYGILL  304 (374)
T ss_pred             EeccCchheEEEeCC-CeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC--------CCCCccccHHHHHHHH
Confidence            699999999999966 6899999999875432221   112234567999998743        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |+|++ |..||..................+..+...++++.+++.+||+.||.+||++.++++.|+..+
T Consensus       305 ~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         305 WEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            99997 999998755433333333333445556678899999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=3.5e-27  Score=184.07  Aligned_cols=137  Identities=30%  Similarity=0.593  Sum_probs=107.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++......   ......++..|+|||++.+        ..++.++||||+||++
T Consensus       195 vHrDikp~Nill~~~-~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~SlGv~l  265 (337)
T cd05054         195 IHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD--------KVYTTQSDVWSFGVLL  265 (337)
T ss_pred             ecCCCCcceEEEeCC-CcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC--------CCCCccccHHHHHHHH
Confidence            699999999999976 679999999997542211   1122345678999998753        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||.+...................+...++++.+++.+||+.+|++||++.+++++|+..+.
T Consensus       266 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         266 WEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            99997 9999976543333333333444555567788999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.8e-28  Score=192.64  Aligned_cols=130  Identities=31%  Similarity=0.470  Sum_probs=111.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||||..||||... +.|||+|||.+....   ...+++||++|||||++...     +.+.|+.++||||+|+++.|+
T Consensus       148 IHRDiKAGNILLse~-g~VKLaDFGSAsi~~---PAnsFvGTPywMAPEVILAM-----DEGqYdgkvDvWSLGITCIEL  218 (948)
T KOG0577|consen  148 IHRDIKAGNILLSEP-GLVKLADFGSASIMA---PANSFVGTPYWMAPEVILAM-----DEGQYDGKVDVWSLGITCIEL  218 (948)
T ss_pred             HhhhccccceEecCC-CeeeeccccchhhcC---chhcccCCccccchhHheec-----cccccCCccceeeccchhhhh
Confidence            799999999999965 789999999886543   24578999999999998642     468899999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ...++|+.+++.+..++.+.....+.-....++..+.+|+..||..-|.+|||.++++.
T Consensus       219 AERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  219 AERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             hhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            99999999999998888776544433334568999999999999999999999999887

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=3.4e-28  Score=191.17  Aligned_cols=143  Identities=27%  Similarity=0.438  Sum_probs=103.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccc---cCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGE---KKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~---~~~~~~~~Dvws~G   74 (198)
                      ||.||||.|.|+-+  |.+||+|||+|......   ......+||..||+||.+......+..   .-..+.++||||||
T Consensus       482 VHSDLKPANFLlVk--G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG  559 (677)
T KOG0596|consen  482 VHSDLKPANFLLVK--GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG  559 (677)
T ss_pred             eecCCCcccEEEEe--eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence            79999999999984  56999999999754332   223456899999999998654322110   12257899999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHH-HHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPD-LAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~-~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++|+|+.|+.||....+............. .++|..-... +.++++.||++||.+||+..++|+  +.++..
T Consensus       560 CILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq--hpFl~~  632 (677)
T KOG0596|consen  560 CILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ--HPFLQI  632 (677)
T ss_pred             hHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc--Cccccc
Confidence            9999999999999755443333332222211 2444443333 999999999999999999999999  666554

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=3.3e-27  Score=179.66  Aligned_cols=134  Identities=28%  Similarity=0.541  Sum_probs=106.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||+++......   ......++..|+|||.+..        ..++.++|+|||||++
T Consensus       146 ~H~dlkp~Nil~~~~-~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDv~slG~il  216 (283)
T cd05048         146 VHRDLAARNCLVGEG-LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY--------GKFTTESDIWSFGVVL  216 (283)
T ss_pred             eccccccceEEEcCC-CcEEECCCcceeeccccccccccCCCcccccccCHHHhcc--------CcCchhhhHHHHHHHH
Confidence            699999999999966 679999999987432211   1223456788999998743        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ||+++ |..||.+..... ..........+..+..+++++.+|+.+||+.||.+||++.+++++|+.+
T Consensus       217 ~el~~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         217 WEIFSYGLQPYYGFSNQE-VIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            99997 999998766533 3333334455566778999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.95  E-value=2.3e-27  Score=193.36  Aligned_cols=130  Identities=33%  Similarity=0.566  Sum_probs=105.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.....   ......+||+.|+|||++.+        ..++.++|||||||++
T Consensus       165 iHrDLKP~NILl~~~-~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--------~~~s~k~DVwSlGvil  235 (496)
T PTZ00283        165 IHRDIKSANILLCSN-GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR--------KPYSKKADMFSLGVLL  235 (496)
T ss_pred             ecCCCCHHHEEEeCC-CCEEEEecccCeeccccccccccccccCCcceeCHHHhCC--------CCCCcHHHHHHHHHHH
Confidence            699999999999976 68999999999754321   12334679999999999853        5688999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      ||+++|..||.+.... .............+|..+++++.+++.+||..||.+||++.+++.+
T Consensus       236 yeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        236 YELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            9999999999875543 2333333444456778899999999999999999999999999874

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=1.5e-27  Score=195.43  Aligned_cols=139  Identities=28%  Similarity=0.541  Sum_probs=115.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCC---CCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE---TGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||-..|+|++.+ ..|||+|||++|..-....++..   .=...||+||.+.        .+.|+.++||||||+++
T Consensus       625 VHRDLATRNCLVge~-l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIl--------y~kFTteSDVWs~GVvL  695 (774)
T KOG1026|consen  625 VHRDLATRNCLVGEN-LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL--------YGKFTTESDVWSFGVVL  695 (774)
T ss_pred             cccchhhhhceeccc-eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhh--------cCcccchhhhhhhhhhh
Confidence            799999999999966 78999999999965444433322   2246899999986        47899999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ||+++ |..||.+..+.+..... ..+...+.|+.++.++.+||..||+..|++||+|+||-..|+.+....+
T Consensus       696 WEIFsyG~QPy~glSn~EVIe~i-~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~  767 (774)
T KOG1026|consen  696 WEIFSYGKQPYYGLSNQEVIECI-RAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP  767 (774)
T ss_pred             hhhhccccCcccccchHHHHHHH-HcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence            99996 89999998876654443 3444578899999999999999999999999999999999998865433

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=5.5e-27  Score=184.44  Aligned_cols=135  Identities=26%  Similarity=0.392  Sum_probs=101.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............||..|+|||++.+        ..++.++|+||+||++|+|
T Consensus       145 vHrDlkp~NIl~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwSlG~il~el  215 (359)
T cd07876         145 IHRDLKPSNIVVKSD-CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEL  215 (359)
T ss_pred             ccCCCCHHHEEECCC-CCEEEecCCCccccccCccCCCCcccCCCCCchhccC--------CCCCcchhhHHHHHHHHHH
Confidence            799999999999976 6799999999976544333445678999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHH--------------------ccCCCC--------------------CCCCCcHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAF--------------------KHARPG--------------------LPEDISPDLAFIV  120 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~--------------------~~~~~~--------------------~p~~~~~~~~~l~  120 (198)
                      ++|..||.+............                    ....+.                    .....++++.+|+
T Consensus       216 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  295 (359)
T cd07876         216 VKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLL  295 (359)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHH
Confidence            999999987653221110000                    000000                    0112357789999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          121 QSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      .+||..||.+|||+.|+++  +.|+.
T Consensus       296 ~~mL~~dP~~R~t~~e~l~--hp~~~  319 (359)
T cd07876         296 SKMLVIDPDKRISVDEALR--HPYIT  319 (359)
T ss_pred             HHHhccCcccCCCHHHHhc--Cchhh
Confidence            9999999999999999999  66654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=1.4e-27  Score=182.41  Aligned_cols=130  Identities=26%  Similarity=0.343  Sum_probs=99.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++............|+..|+|||++..        ..++.++|+||+||++||+
T Consensus       132 iH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DiwslG~il~el  202 (290)
T cd07862         132 VHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--------SSYATPVDLWSVGCIFAEM  202 (290)
T ss_pred             eeCCCCHHHEEEcCC-CCEEEccccceEeccCCcccccccccccccChHHHhC--------CCCCCccchHHHHHHHHHH
Confidence            699999999999976 6799999999975544333445678999999998753        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCC-------------------------CCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARP-------------------------GLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|.+||.+................+                         .....+++.+.+++.+||+.||.+||++.
T Consensus       203 ~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~  282 (290)
T cd07862         203 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY  282 (290)
T ss_pred             HcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHH
Confidence            99999998766543322211100000                         01134678889999999999999999999


Q ss_pred             HHHH
Q 029154          136 QIIR  139 (198)
Q Consensus       136 ~~l~  139 (198)
                      ++++
T Consensus       283 ~~l~  286 (290)
T cd07862         283 SALS  286 (290)
T ss_pred             HHhc
Confidence            9987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.94  E-value=1.4e-26  Score=177.64  Aligned_cols=140  Identities=31%  Similarity=0.538  Sum_probs=108.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||++..............+..|++||++.+        ..++.++|||||||++|||
T Consensus       141 vH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwSlG~il~el  211 (297)
T cd05089         141 IHRDLAARNVLVGEN-LASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY--------SVYTTKSDVWSFGVLLWEI  211 (297)
T ss_pred             ccCcCCcceEEECCC-CeEEECCcCCCccccceeccCCCCcCccccCchhhcc--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999876 6799999999864322111112223557999998743        5678899999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ++ |..||.+..... .............+..++..+.+++.+||..+|.+||+++++++.|+.+......
T Consensus       212 ~t~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         212 VSLGGTPYCGMTCAE-LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             HcCCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            97 999998765433 2333333444556777899999999999999999999999999999988765543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.94  E-value=8.3e-28  Score=168.63  Aligned_cols=106  Identities=28%  Similarity=0.461  Sum_probs=89.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||+||+||||+.+ +++|+||||++....++...+...|+..|||||.+..+.    ....|+.++||||+|+++.||
T Consensus       171 IHRDvKPsNiLIn~~-GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~----n~~gY~vksDvWSLGItmiEl  245 (282)
T KOG0984|consen  171 IHRDVKPSNILINYD-GQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPEL----NQKGYSVKSDVWSLGITMIEM  245 (282)
T ss_pred             hhccCCcceEEEccC-CcEEEcccccceeehhhhHHHHhcCCCccCChhhcCccc----Ccccceeehhhhhhhhhhhhh
Confidence            799999999999988 789999999999877766555578999999999987633    345799999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPED  111 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~  111 (198)
                      .+++.||...........+..+...|.+|.+
T Consensus       246 A~lr~PY~~w~tpF~qLkqvVeep~P~Lp~~  276 (282)
T KOG0984|consen  246 AILRFPYESWGTPFQQLKQVVEEPSPQLPAD  276 (282)
T ss_pred             hhccccccccCCHHHHHHHHhcCCCCCCccc
Confidence            9999999988877777777777777777653

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.94  E-value=8.8e-28  Score=186.45  Aligned_cols=132  Identities=27%  Similarity=0.493  Sum_probs=105.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       117 vHrDlkp~NIll~~~-~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~e  187 (323)
T cd05571         117 VYRDLKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--------NDYGRAVDWWGLGVVMYE  187 (323)
T ss_pred             EeCCCCHHHEEECCC-CCEEEeeCCCCcccccCCCcccceecCccccChhhhcC--------CCCCccccCcccchhhhh
Confidence            699999999999976 679999999987432 2222344679999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~  145 (198)
                      |++|..||.+.......  .........+|..+++++.+++.+||..||.+||     ++.++++  +.|+
T Consensus       188 lltg~~Pf~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~--h~~f  254 (323)
T cd05571         188 MMCGRLPFYNQDHEKLF--ELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME--HRFF  254 (323)
T ss_pred             hhcCCCCCCCCCHHHHH--HHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc--CCCc
Confidence            99999999875543322  2223345567788999999999999999999999     7999987  4444

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.94  E-value=5.6e-29  Score=183.67  Aligned_cols=130  Identities=30%  Similarity=0.494  Sum_probs=108.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||..||||+.+ +++||+|||++....+... ..+.+||+.|||||++.        .-.|+.++||||+|++..|
T Consensus       151 IHRDIKAGNILLNT~-G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~--------EIGY~~~ADIWSLGITaIE  221 (502)
T KOG0574|consen  151 IHRDIKAGNILLNTD-GIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIE--------EIGYDTKADIWSLGITAIE  221 (502)
T ss_pred             HHhhcccccEEEccc-chhhhhhccccchhhhhHHhhCccccCcccccHHHHH--------HhccchhhhHhhhcchhhh
Confidence            799999999999977 7899999999987665433 45679999999999985        3678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |..|++||....++...+.+.-.. .....|+.++.++.++++.||...|.+|.|+-++++
T Consensus       222 MAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  222 MAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             hhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            999999999888766654432111 112346778999999999999999999999999988

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=2.8e-28  Score=206.60  Aligned_cols=133  Identities=26%  Similarity=0.407  Sum_probs=114.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+||+|+.+ +.+|++|||.|+....+.     ......||+.|||||++.+..     ..+...+.||||+||
T Consensus      1356 VHRDIK~aNI~Ld~~-g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~-----~kG~~~A~DiWslGC 1429 (1509)
T KOG4645|consen 1356 VHRDIKPANILLDFN-GLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTK-----GKGHGGAADIWSLGC 1429 (1509)
T ss_pred             eecCCCccceeeecC-CcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccc-----cCCCCcchhhhcccc
Confidence            799999999999977 689999999998654432     234568999999999997632     345567899999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++.||+||+.||...++.-+...++-.+..|++|+.++.+-++|+.+||..||.+|.++.|+++
T Consensus      1430 VVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1430 VVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             eEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            9999999999999888777777777778889999999999999999999999999999999988

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-27  Score=190.50  Aligned_cols=136  Identities=30%  Similarity=0.611  Sum_probs=118.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCC--ccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETG--TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||...|||+... .++||+|||++|...+...++...|  ...||+||.++        ...++.++|||.||+++|
T Consensus       513 VHRDIAaRNiLVsSp-~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESIN--------fRrFTtASDVWMFgVCmW  583 (974)
T KOG4257|consen  513 VHRDIAARNILVSSP-QCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESIN--------FRRFTTASDVWMFGVCMW  583 (974)
T ss_pred             hhhhhhhhheeecCc-ceeeecccchhhhccccchhhccccccceeecCccccc--------hhcccchhhHHHHHHHHH
Confidence            799999999999965 7899999999998887777766655  46899999985        478999999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++. |..||++..+.+ .......+.+++.|+.+++.+..|+.+||++||.+||.+.++...|++++.
T Consensus       584 EIl~lGvkPfqgvkNsD-VI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  584 EILSLGVKPFQGVKNSD-VIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHHhcCCccccccccc-eEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            9974 999999987644 334455678889999999999999999999999999999999999988876

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=1.2e-27  Score=186.38  Aligned_cols=131  Identities=30%  Similarity=0.449  Sum_probs=113.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|||||+.||++.+++ .|||+|||+|+...... ...+.+||+.||+||.+.        +..|+.|+|+||+||++||
T Consensus       128 LHRDlK~~Nifltk~~-~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~--------d~pYn~KSDiWsLGC~~yE  198 (426)
T KOG0589|consen  128 LHRDLKCANIFLTKDK-KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILS--------DIPYNEKSDIWSLGCCLYE  198 (426)
T ss_pred             hcccchhhhhhccccC-ceeecchhhhhhcCCchhhhheecCCCcccCHHHhC--------CCCCCccCcchhhcchHHH
Confidence            5999999999999884 57999999999776554 567789999999999985        4889999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |++-+++|.+.+.. ..........-.++|..++.+++.++..|+..+|..||++.+++.+.
T Consensus       199 m~~lk~aF~a~~m~-~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P  259 (426)
T KOG0589|consen  199 MCTLKPAFKASNMS-ELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP  259 (426)
T ss_pred             HHhcccccCccchH-HHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence            99999999886643 34444445556778899999999999999999999999999999863

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=6.4e-27  Score=190.32  Aligned_cols=129  Identities=29%  Similarity=0.554  Sum_probs=103.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   .....+||+.|+|||++.+        ..++.++||||+||++
T Consensus       191 vHrDlkp~NIll~~~-~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~~l  261 (478)
T PTZ00267        191 MHRDLKSANIFLMPT-GIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER--------KRYSKKADMWSLGVIL  261 (478)
T ss_pred             EECCcCHHhEEECCC-CcEEEEeCcCceecCCccccccccccCCCccccCHhHhCC--------CCCCcHHhHHHHHHHH
Confidence            699999999999976 679999999997543321   1234579999999998853        5688999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |+|++|..||.+...... ..........+.|..++.++.+++.+||..||.+||++.+++.
T Consensus       262 ~el~tg~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        262 YELLTLHRPFKGPSQREI-MQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            999999999987654332 2333333444566778999999999999999999999999875

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.94  E-value=7.9e-27  Score=177.66  Aligned_cols=134  Identities=28%  Similarity=0.505  Sum_probs=105.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....+++.|+|||.+..        ..++.++|+||+|+++
T Consensus       146 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l  216 (283)
T cd05091         146 VHKDLATRNVLVFDK-LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY--------GKFSIDSDIWSYGVVL  216 (283)
T ss_pred             cccccchhheEecCC-CceEecccccccccccchheeeccCccCCccccCHHHHhc--------CCCCcchhHHHHHHHH
Confidence            699999999999966 6799999999875432221   223455778999998753        4578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |||++ |..||.+..... .............+..++..+.+++.+||+.+|.+||++.+++..|+.|
T Consensus       217 ~el~~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  283 (283)
T cd05091         217 WEVFSYGLQPYCGYSNQD-VIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW  283 (283)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence            99998 888887765433 3333334444556778999999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.94  E-value=1.2e-26  Score=183.43  Aligned_cols=134  Identities=32%  Similarity=0.561  Sum_probs=104.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++........   ....++..|+|||++.+        ..++.++|+||||+++
T Consensus       236 vH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDi~slG~~l  306 (375)
T cd05104         236 IHRDLAARNILLTHG-RITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFN--------CVYTFESDVWSYGILL  306 (375)
T ss_pred             eccCCchhhEEEECC-CcEEEecCccceeccCcccccccCCCCCCcceeChhHhcC--------CCCCCCCCHHHHHHHH
Confidence            699999999999966 67999999999754322211   12234567999999853        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ||+++ |..||.....................|...+.++.+++.+||..||.+||++.++++.|+.
T Consensus       307 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         307 WEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            99997 8889977654433333333444455566778999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.94  E-value=8.1e-27  Score=183.82  Aligned_cols=135  Identities=24%  Similarity=0.362  Sum_probs=101.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............||..|+|||++.+        ..++.++|||||||++|+|
T Consensus       148 vH~Dlkp~NIll~~~-~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwSlG~il~el  218 (364)
T cd07875         148 IHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEM  218 (364)
T ss_pred             ecCCCCHHHEEECCC-CcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhC--------CCCCchhhHHhHHHHHHHH
Confidence            699999999999976 6899999999986554433445678999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHc--------------------cCCCC--------------------CCCCCcHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFK--------------------HARPG--------------------LPEDISPDLAFIV  120 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~~--------------------~p~~~~~~~~~l~  120 (198)
                      ++|+.||.+.............                    ...+.                    .....+.++.+++
T Consensus       219 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll  298 (364)
T cd07875         219 IKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL  298 (364)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHH
Confidence            9999999876543322111100                    00000                    0111346789999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          121 QSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      .+||..||.+|||+.++++  +.|+.
T Consensus       299 ~~mL~~dP~~R~t~~e~L~--hp~~~  322 (364)
T cd07875         299 SKMLVIDASKRISVDEALQ--HPYIN  322 (364)
T ss_pred             HHhcCcCcccCCCHHHHhc--Ccccc
Confidence            9999999999999999999  66654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=4.9e-27  Score=182.90  Aligned_cols=135  Identities=25%  Similarity=0.375  Sum_probs=108.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc--cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV--TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|||||.+|||||.+ +.+||+|||||+....  ...++..+.|.+|.+||.+.+       ...|+...|+||+||++.
T Consensus       240 lHRDIK~SNiLidn~-G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG-------~t~Yg~aVDlWS~GCIl~  311 (560)
T KOG0600|consen  240 LHRDIKGSNILIDNN-GVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLG-------ATSYGTAVDLWSVGCILA  311 (560)
T ss_pred             eeccccccceEEcCC-CCEEeccccceeeccCCCCcccccceEEeeccChHHhcC-------CcccccceeehhhhHHHH
Confidence            699999999999966 7899999999995433  334677788999999999987       467999999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHc--cCC------CCCC-------------------CCCcHHHHHHHHHhcccCCCCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFK--HAR------PGLP-------------------EDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~--~~~------~~~p-------------------~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ||+.|++.|+|.....+...+...  ...      ..+|                   ..++....+|+..+|.+||.+|
T Consensus       312 El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR  391 (560)
T KOG0600|consen  312 ELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKR  391 (560)
T ss_pred             HHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccc
Confidence            999999999998877765433211  100      0111                   2246778899999999999999


Q ss_pred             CCHHHHHHHHHHHH
Q 029154          132 PSFSQIIRMLNAFL  145 (198)
Q Consensus       132 ps~~~~l~~l~~~~  145 (198)
                      .|+.++++  +.++
T Consensus       392 ~tA~~aL~--seyF  403 (560)
T KOG0600|consen  392 GTASSALQ--SEYF  403 (560)
T ss_pred             ccHHHHhc--Cccc
Confidence            99999998  7766

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=7e-27  Score=183.56  Aligned_cols=135  Identities=24%  Similarity=0.379  Sum_probs=101.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............||..|+|||++.+        ..++.++|+|||||++|+|
T Consensus       141 vHrDikp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwslG~il~el  211 (355)
T cd07874         141 IHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEM  211 (355)
T ss_pred             ccCCCChHHEEECCC-CCEEEeeCcccccCCCccccCCccccCCccCHHHHcC--------CCCCchhhHHHHHHHHHHH
Confidence            799999999999976 6899999999986554444455678999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHc--------------------cCCC--------------------CCCCCCcHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFK--------------------HARP--------------------GLPEDISPDLAFIV  120 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~--------------------~~p~~~~~~~~~l~  120 (198)
                      ++|+.||.+.............                    ...+                    ..+...+.++.+++
T Consensus       212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  291 (355)
T cd07874         212 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL  291 (355)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHH
Confidence            9999999875533221110000                    0000                    01112356789999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          121 QSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      .+||..||.+|||+.++++  +.|+.
T Consensus       292 ~~mL~~dP~~Rps~~ell~--hp~~~  315 (355)
T cd07874         292 SKMLVIDPAKRISVDEALQ--HPYIN  315 (355)
T ss_pred             HHHhcCCchhcCCHHHHhc--Ccchh
Confidence            9999999999999999999  55553

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.94  E-value=5.7e-27  Score=175.93  Aligned_cols=138  Identities=29%  Similarity=0.430  Sum_probs=108.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+|+... ....++..++|..|.|||++.+       ...|+...|+||+||++.|
T Consensus       142 lHRDLKPQNlLi~~~-G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlG-------s~~Ys~~vDiWs~GcIfaE  213 (323)
T KOG0594|consen  142 LHRDLKPQNLLISSS-GVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLG-------STSYSTSVDIWSLGCIFAE  213 (323)
T ss_pred             ecccCCcceEEECCC-CcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcC-------CCcCCCCcchHhHHHHHHH
Confidence            699999999999976 789999999999655 3344777899999999999876       4568999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC----------------CCC------------CCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP----------------GLP------------EDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------~~p------------~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |+++++.|.+.....+...+...-..|                .++            ...+++..+++.+||+++|.+|
T Consensus       214 m~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R  293 (323)
T KOG0594|consen  214 MFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKR  293 (323)
T ss_pred             HHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccC
Confidence            999999999988766654443321111                011            1123578999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhc
Q 029154          132 PSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~  148 (198)
                      .|++.++.  +..+...
T Consensus       294 ~Sa~~al~--h~yf~~~  308 (323)
T KOG0594|consen  294 ISAKGALT--HPYFSEL  308 (323)
T ss_pred             cCHHHHhc--Chhhccc
Confidence            99999998  5444433

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.94  E-value=1.9e-26  Score=173.38  Aligned_cols=134  Identities=25%  Similarity=0.519  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+||+++.+ +.+||+|||+++.......    .....++..|+|||.+..        ..++.++|+||||++
T Consensus       117 ~H~dlkp~nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~  187 (257)
T cd05116         117 VHRDLAARNVLLVTQ-HYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNY--------YKFSSKSDVWSFGVL  187 (257)
T ss_pred             eecccchhhEEEcCC-CeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhcc--------CCcCchhHHHHHHHH
Confidence            699999999999976 6799999999975432221    112234578999998743        457889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +||+++ |..||.+..... ..........+..|..+++++.+++.+||..||++||++.+|.+.|+.+
T Consensus       188 l~el~t~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         188 MWEAFSYGQKPYKGMKGNE-VTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHhCCCCCCCCCCHHH-HHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            999997 999998765433 2333344455667888999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.94  E-value=5.7e-27  Score=180.30  Aligned_cols=138  Identities=24%  Similarity=0.385  Sum_probs=101.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||++..... ........|+..|+|||++.+       ...++.++|+||+||++|+
T Consensus       125 vH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~  196 (303)
T cd07869         125 LHRDLKPQNLLISDT-GELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLG-------STEYSTCLDMWGVGCIFVE  196 (303)
T ss_pred             ecCCCCHHHEEECCC-CCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcC-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999966 6799999999874322 222334578999999998753       2457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-CCC----------------C-----CC---------CCCcHHHHHHHHHhcccCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-ARP----------------G-----LP---------EDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~----------------~-----~p---------~~~~~~~~~l~~~~l~~dp  128 (198)
                      |++|..||.+.............. ..+                .     .+         ...+.++.+++.+||+.||
T Consensus       197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp  276 (303)
T cd07869         197 MIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFP  276 (303)
T ss_pred             HHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCc
Confidence            999999998765543322221110 000                0     00         1134678899999999999


Q ss_pred             CCCCCHHHHHHHHHHHHhhc
Q 029154          129 NLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       129 ~~Rps~~~~l~~l~~~~~~~  148 (198)
                      .+|||+.++++  |.|+...
T Consensus       277 ~~R~s~~~~l~--h~~f~~~  294 (303)
T cd07869         277 KNRLSAQAALS--HEYFSDL  294 (303)
T ss_pred             hhccCHHHHhc--CcccccC
Confidence            99999999998  7776544

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=1.3e-26  Score=181.91  Aligned_cols=143  Identities=24%  Similarity=0.399  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++...... ......||..|++||++....   ......+.++|||||||++||
T Consensus       190 vHrDlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~~~DvwslGvil~e  265 (353)
T PLN00034        190 VHRDIKPSNLLINSA-KNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDL---NHGAYDGYAGDIWSLGVSILE  265 (353)
T ss_pred             eecCCCHHHEEEcCC-CCEEEcccccceecccccccccccccCccccCcccccccc---ccCcCCCcchhHHHHHHHHHH
Confidence            699999999999976 679999999987543221 223467999999999874210   011234568999999999999


Q ss_pred             HHcCCCCCCCCCc--HHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSN--LQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |++|+.||.....  .............+..+..++.++.+|+.+||..||++||++.|+++  +.|+....
T Consensus       266 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~--hp~~~~~~  335 (353)
T PLN00034        266 FYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ--HPFILRAQ  335 (353)
T ss_pred             HHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc--CcccccCC
Confidence            9999999974322  12222222233445566778999999999999999999999999999  77766543

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.94  E-value=1.7e-27  Score=170.99  Aligned_cols=139  Identities=24%  Similarity=0.417  Sum_probs=101.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----------ccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      .||||||.|||+..+ +.++|.|||.+........          .....+|..|.|||.+...     .....+.++||
T Consensus       151 AH~DiKP~NILls~~-~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk-----~~~ti~ertDI  224 (302)
T KOG2345|consen  151 AHRDIKPANILLSDS-GLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK-----SHCTITERTDI  224 (302)
T ss_pred             cccCCCcceeEecCC-CceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc-----cCcccccccch
Confidence            499999999999976 6799999998864322110          1123578999999998642     24566889999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |||||++|+|+.|..||....................+|  ..+++.+.+++..||+.||.+||++.+++..+++..
T Consensus       225 WSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  225 WSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             hhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            999999999999999996432211111111111122222  228899999999999999999999999999887653

>PTZ00284 protein kinase; Provisional

Probab=99.94  E-value=1.3e-26  Score=188.08  Aligned_cols=136  Identities=21%  Similarity=0.295  Sum_probs=99.2

Q ss_pred             CCCCCCCCCeEEcCCCC---------------ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCC
Q 029154            1 MGKFMKEDNLLLTPDQK---------------SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN   65 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---------------~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~   65 (198)
                      |||||||+|||++.++.               .+||+|||++.....  .....+||..|+|||++.+        ..++
T Consensus       254 iHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~--------~~~~  323 (467)
T PTZ00284        254 MHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLG--------LGWM  323 (467)
T ss_pred             ecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhc--------CCCC
Confidence            79999999999986532               489999998764322  2335689999999999864        5688


Q ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHH--ccC-----------------------CCCC-C----------
Q 029154           66 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF--KHA-----------------------RPGL-P----------  109 (198)
Q Consensus        66 ~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~--~~~-----------------------~~~~-p----------  109 (198)
                      .++|||||||++|||++|+.||.+............  ...                       .+.. +          
T Consensus       324 ~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (467)
T PTZ00284        324 YSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARAR  403 (467)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhccc
Confidence            999999999999999999999987664332211100  000                       0000 0          


Q ss_pred             ----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154          110 ----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       110 ----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                          ...++.+.+|+.+||..||.+|||+.|+++  |.|+...
T Consensus       404 ~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~--Hp~~~~~  444 (467)
T PTZ00284        404 PVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT--HPYVLKY  444 (467)
T ss_pred             chhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc--Ccccccc
Confidence                011355779999999999999999999999  7776543

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=2.6e-27  Score=188.48  Aligned_cols=135  Identities=26%  Similarity=0.502  Sum_probs=117.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||||.+||+|+.+-|.|||+|+|||.....+. ....+|||.|||||.+-         ..|+..+||||||+++.||
T Consensus       167 IHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-aksvIGTPEFMAPEmYE---------E~YnE~VDVYaFGMCmLEM  236 (632)
T KOG0584|consen  167 IHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-AKSVIGTPEFMAPEMYE---------ENYNELVDVYAFGMCMLEM  236 (632)
T ss_pred             cccccccceEEEcCCcCceeecchhHHHHhhccc-cceeccCccccChHHHh---------hhcchhhhhhhhhHHHHHH
Confidence            7999999999999888999999999998655444 34479999999999983         5789999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCC-CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPG-LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +|+..||....+..+.|.++..+..|. +-..-+++++.||.+||.. .++|+++.|+|+  +.|+...
T Consensus       237 vT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~--d~Ff~~d  302 (632)
T KOG0584|consen  237 VTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK--DPFFDED  302 (632)
T ss_pred             HhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh--Chhhccc
Confidence            999999999888888888888777663 2333579999999999998 999999999999  7777654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.7e-27  Score=187.42  Aligned_cols=130  Identities=25%  Similarity=0.367  Sum_probs=106.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+.++++|+|||.++.....  +.+.+-|..|.|||+..        ...|+..+|+||||+++|+|
T Consensus       437 vhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~--------~~~yt~acD~WSLGvlLy~M  506 (612)
T KOG0603|consen  437 VHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLA--------IQEYTEACDWWSLGVLLYEM  506 (612)
T ss_pred             eecCCChhheeecCCCCcEEEEEechhhhCchh--hcccchhhcccChhhhc--------cCCCCcchhhHHHHHHHHHH
Confidence            799999999999544578999999999865544  44556788999999985        37899999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|+.||........ ....  ...+.....++.++++|+.+||+.||.+|++++++..  +.|+
T Consensus       507 L~G~tp~~~~P~~~e-i~~~--i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~--h~w~  566 (612)
T KOG0603|consen  507 LTGRTLFAAHPAGIE-IHTR--IQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA--HPWF  566 (612)
T ss_pred             HhCCCccccCCchHH-HHHh--hcCCccccccCHHHHHHHHHhccCChhhCcChhhhcc--Ccch
Confidence            999999987655422 2222  2233344789999999999999999999999999999  8887

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.94  E-value=3.1e-26  Score=178.35  Aligned_cols=136  Identities=26%  Similarity=0.475  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++..... ......|+..|+|||++.+        ..++.++|+|||||++||+
T Consensus       126 vH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwslG~il~el  195 (331)
T cd06649         126 MHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG--------THYSVQSDIWSMGLSLVEL  195 (331)
T ss_pred             EcCCCChhhEEEcCC-CcEEEccCccccccccc-ccccCCCCcCcCCHhHhcC--------CCCCchHhHHHHHHHHHHH
Confidence            699999999999976 67999999998754322 2334578999999999853        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHH---------------------------------------------HHHHHccCCCCCC-CCCcH
Q 029154           81 LTNRLPFEGMSNLQAA---------------------------------------------YAAAFKHARPGLP-EDISP  114 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~p-~~~~~  114 (198)
                      ++|+.||.........                                             .........+..+ ..+++
T Consensus       196 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (331)
T cd06649         196 AIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTP  275 (331)
T ss_pred             HhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccH
Confidence            9999999654321110                                             0001111112111 24678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154          115 DLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       115 ~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ++.+|+.+||..||++||++.++++  +.|+...
T Consensus       276 ~l~~li~~~L~~~P~~Rpt~~ell~--h~~~~~~  307 (331)
T cd06649         276 DFQEFVNKCLIKNPAERADLKMLMN--HTFIKRS  307 (331)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhc--ChHHhhc
Confidence            9999999999999999999999999  6676543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.9e-27  Score=182.40  Aligned_cols=138  Identities=26%  Similarity=0.422  Sum_probs=107.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC------cccccccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE------TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      |||||||+|+||+.+ +++||+|||.+...      .....+...+||+.|+|||.+.++.    .....+.+.||||+|
T Consensus       232 iHRDIKPsNLLl~~~-g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~----~~~~~g~a~DiWalG  306 (576)
T KOG0585|consen  232 IHRDIKPSNLLLSSD-GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGN----SFSYSGFALDIWALG  306 (576)
T ss_pred             eccccchhheEEcCC-CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCC----Cccccchhhhhhhhh
Confidence            799999999999977 88999999998643      2222344568999999999986522    012235689999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCC--CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED--ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +++|.++.|+.||.+......  ...+...+..+|..  +.+++.+||.++|.+||.+|.+..+|..  |.|...
T Consensus       307 VTLYCllfG~~PF~~~~~~~l--~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~--Hpwvt~  377 (576)
T KOG0585|consen  307 VTLYCLLFGQLPFFDDFELEL--FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL--HPWVTR  377 (576)
T ss_pred             hhHHHhhhccCCcccchHHHH--HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee--cceecc
Confidence            999999999999987664433  33344555566654  7899999999999999999999999988  555543

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=5e-27  Score=182.61  Aligned_cols=129  Identities=28%  Similarity=0.496  Sum_probs=103.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++|+
T Consensus       117 vHrDikp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil~e  187 (328)
T cd05593         117 VYRDLKLENLMLDKD-GHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLED--------NDYGRAVDWWGLGVVMYE  187 (328)
T ss_pred             EecccCHHHeEECCC-CcEEEecCcCCccCCCcccccccccCCcCccChhhhcC--------CCCCccCCccccchHHHH
Confidence            699999999999976 679999999987532 2222344679999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRM  140 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~  140 (198)
                      +++|..||.+.......  .........+|..+++++.+++.+||..||.+|+     ++.+++++
T Consensus       188 lltG~~Pf~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         188 MMCGRLPFYNQDHEKLF--ELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HhhCCCCCCCCCHHHHH--HHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            99999999876543322  2223344567788999999999999999999997     89999873

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.94  E-value=4.1e-26  Score=172.64  Aligned_cols=134  Identities=28%  Similarity=0.516  Sum_probs=104.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....++..|++||.+..        ..++.++|+||||+++
T Consensus       134 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~Di~slG~il  204 (272)
T cd05075         134 IHRDLAARNCMLNEN-MNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD--------RVYTTKSDVWSFGVTM  204 (272)
T ss_pred             eccccchhheEEcCC-CCEEECCCCcccccCcccceecCCcccCCcccCCHHHccC--------CCcChHHHHHHHHHHH
Confidence            699999999999866 6799999999975433221   112245678999998743        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |++++ |..||.+..... .............+..++..+.+++.+||..||.+||++.++++.|+..
T Consensus       205 ~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         205 WEIATRGQTPYPGVENSE-IYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99998 889998755432 3333334444455667889999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.94  E-value=1.1e-26  Score=173.07  Aligned_cols=137  Identities=28%  Similarity=0.349  Sum_probs=110.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||++|+|+... +.+||+|||+||..+.. ..++..+-|.+|.|||.+.+       ...|+...|+||+||++.|
T Consensus       199 lHRDLK~SNLLm~~~-G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG-------~~tyst~iDMWSvGCI~aE  270 (419)
T KOG0663|consen  199 LHRDLKTSNLLLSHK-GILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLG-------AKTYSTAVDMWSVGCIFAE  270 (419)
T ss_pred             EecccchhheeeccC-CcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcC-------CcccCcchhhhhHHHHHHH
Confidence            699999999999966 78999999999976654 33556778999999999986       4678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC-----------------------------CCCC-CcHHHHHHHHHhcccCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG-----------------------------LPED-ISPDLAFIVQSCWVEDPN  129 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------~p~~-~~~~~~~l~~~~l~~dp~  129 (198)
                      ++.+++.|.|.....+...+...-..|.                             ++.. +++...+|+..+|.+||.
T Consensus       271 ~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~  350 (419)
T KOG0663|consen  271 LLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPG  350 (419)
T ss_pred             HHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcc
Confidence            9999999999887776655433211110                             0111 357788999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhh
Q 029154          130 LRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       130 ~Rps~~~~l~~l~~~~~~  147 (198)
                      +|.|+++.|+  +.|+..
T Consensus       351 kR~tA~~~L~--h~~F~e  366 (419)
T KOG0663|consen  351 KRITAEDGLK--HEYFRE  366 (419)
T ss_pred             ccccHHHhhc--cccccc
Confidence            9999999999  777664

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-26  Score=196.33  Aligned_cols=139  Identities=29%  Similarity=0.526  Sum_probs=114.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCC---CCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE---TGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||...|+||+.. ..+||+|||+|+.......+...   .-...|||||.+.        .+.|+.|+||||||+++
T Consensus       824 vHRDLAaRNCLL~~~-r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~--------d~iFtskSDvWsFGVll  894 (1025)
T KOG1095|consen  824 VHRDLAARNCLLDER-RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLK--------DGIFTSKSDVWSFGVLL  894 (1025)
T ss_pred             cCcchhhhheeeccc-CcEEEcccchhHhhhhchheeccCccccceecCCHHHHh--------hcccccccchhhhHHHH
Confidence            799999999999977 78999999999944333332221   1246899999986        37899999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ||+++ |..||.+..+.+. ......+.+.+.|..+++.+.++|..||..+|++||+|..+++.+..++....
T Consensus       895 WEifslG~~PY~~~~n~~v-~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~  966 (1025)
T KOG1095|consen  895 WEIFSLGATPYPSRSNFEV-LLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL  966 (1025)
T ss_pred             HHHHhCCCCCCCCcchHHH-HHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence            99997 8899988776544 34345566889999999999999999999999999999999998888776443

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=4.8e-26  Score=171.70  Aligned_cols=134  Identities=29%  Similarity=0.553  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc--cCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM--TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||++.........  ....++..|++||.+.+        ..++.++|+||||+++|
T Consensus       126 ~H~dlkp~nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~  196 (263)
T cd05052         126 IHRDLAARNCLVGEN-HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSDVWAFGVLLW  196 (263)
T ss_pred             eecccCcceEEEcCC-CcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc--------CCCCchhHHHHHHHHHH
Confidence            699999999999866 67999999998754332211  11234567999998753        56788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |+++ |..||.+... ............+..+..++.++.+++.+||..||++||++.++++.|+.+
T Consensus       197 el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         197 EIATYGMSPYPGIDL-SQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHcCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            9998 8999987553 333334444455667788999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.94  E-value=2e-26  Score=176.63  Aligned_cols=131  Identities=11%  Similarity=0.195  Sum_probs=98.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--------cccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||++.+ +.++|+|||+++....+.        ......||+.|+|||+..+        ..++.++||||
T Consensus       148 iHrDiKp~Nill~~~-~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~--------~~~~~~~DiwS  218 (294)
T PHA02882        148 SHGDIKPENIMVDGN-NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG--------ACVTRRGDLES  218 (294)
T ss_pred             ecCCCCHHHEEEcCC-CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC--------CCCCcHHHHHH
Confidence            699999999999866 679999999997432111        1123468999999998753        56789999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCcHHHHHH-------HHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           73 FGIVLWELLTNRLPFEGMSNLQAAYA-------AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~~~~~~~~~~~-------~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +||++||+++|..||.+.........       ....... .....++..+.+++..||..+|.+||++.++.+.+
T Consensus       219 lG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        219 LGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK-IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh-hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            99999999999999987632211110       1111111 12344678999999999999999999999998865

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.6e-27  Score=181.14  Aligned_cols=128  Identities=25%  Similarity=0.405  Sum_probs=101.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..++.++|+||+||++|+
T Consensus       115 ~HrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslGvil~e  185 (312)
T cd05585         115 IYRDLKPENILLDYQ-GHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLG--------HGYTKAVDWWTLGVLLYE  185 (312)
T ss_pred             EeCCCCHHHeEECCC-CcEEEEECcccccCccCCCccccccCCcccCCHHHHcC--------CCCCCccceechhHHHHH
Confidence            699999999999976 6799999999875322 222334679999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS---FSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps---~~~~l~  139 (198)
                      |++|..||.+...... .. ........+|..+++++.+++.+||..||.+||+   +.+++.
T Consensus       186 l~tg~~pf~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         186 MLTGLPPFYDENVNEM-YR-KILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHhCCCCcCCCCHHHH-HH-HHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            9999999987654322 22 2234455677889999999999999999999975   566665

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=1.9e-26  Score=179.69  Aligned_cols=141  Identities=24%  Similarity=0.331  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    .....+|+..|+|||++.+      ....++.++|||||||+
T Consensus       125 vH~dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~~~DvwSlGvv  197 (338)
T cd07859         125 FHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS------FFSKYTPAIDIWSIGCI  197 (338)
T ss_pred             ecCCCCHHHeEECCC-CcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhc------cccccCchhHHHHHHHH
Confidence            699999999999976 689999999997432211    1234578999999998743      12467889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHH--------------------------HHccCCCCC---CCCCcHHHHHHHHHhcccC
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAA--------------------------AFKHARPGL---PEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~---p~~~~~~~~~l~~~~l~~d  127 (198)
                      +|+|++|+.||.+..........                          .........   ....++.+.+++.+||..|
T Consensus       198 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  277 (338)
T cd07859         198 FAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFD  277 (338)
T ss_pred             HHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcC
Confidence            99999999999765532211000                          000000000   1236788999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhhcCC
Q 029154          128 PNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      |.+||+++++++  +.|+.....
T Consensus       278 P~~Rpt~~e~l~--hp~f~~~~~  298 (338)
T cd07859         278 PKDRPTAEEALA--DPYFKGLAK  298 (338)
T ss_pred             cccCCCHHHHhc--CchhhhcCc
Confidence            999999999999  777765443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=4.2e-26  Score=172.72  Aligned_cols=135  Identities=32%  Similarity=0.561  Sum_probs=103.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||++..............+..|++||++..        ..++.++|+||||+++||+
T Consensus       134 ~H~dikp~nili~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~--------~~~~~~~Di~slG~il~el  204 (270)
T cd05047         134 IHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--------SVYTTNSDVWSYGVLLWEI  204 (270)
T ss_pred             eecccccceEEEcCC-CeEEECCCCCccccchhhhccCCCCccccCChHHHcc--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 6799999999863322111112233567999998743        5678899999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++ |..||.+.... ..............+..++.++.+++.+||..+|.+||++.+++..|+.++
T Consensus       205 ~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         205 VSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HcCCCCCccccCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            96 99999765532 223333333444556678899999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.94  E-value=2.4e-26  Score=175.64  Aligned_cols=131  Identities=25%  Similarity=0.372  Sum_probs=98.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... .......++..|+|||++.+       ...++.++|+||+||++|+
T Consensus       125 vH~dlkp~Nil~~~~-~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~~l~~  196 (288)
T cd07871         125 LHRDLKPQNLLINEK-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG-------STEYSTPIDMWGVGCILYE  196 (288)
T ss_pred             ccCCCCHHHEEECCC-CCEEECcCcceeeccCCCccccCceecccccChHHhcC-------CcccCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998743321 22334568899999998753       3457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC--------------------C--------CCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR--------------------P--------GLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~--------~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|+.||.+................                    +        .....+++++.+++.+||..||.+|
T Consensus       197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R  276 (288)
T cd07871         197 MATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSR  276 (288)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccC
Confidence            99999999876543332211110000                    0        0012367889999999999999999


Q ss_pred             CCHHHHHH
Q 029154          132 PSFSQIIR  139 (198)
Q Consensus       132 ps~~~~l~  139 (198)
                      ||++|+++
T Consensus       277 ~t~~~~l~  284 (288)
T cd07871         277 ISAEAALR  284 (288)
T ss_pred             CCHHHHhc
Confidence            99999987

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.94  E-value=6.6e-26  Score=173.43  Aligned_cols=136  Identities=25%  Similarity=0.488  Sum_probs=107.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||++.......   ......++..|++||.+.+        ..++.++|+||||+++
T Consensus       145 ~H~dlkp~Nil~~~~-~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  215 (291)
T cd05094         145 VHRDLATRNCLVGAN-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY--------RKFTTESDVWSFGVIL  215 (291)
T ss_pred             eecccCcceEEEccC-CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc--------CCCCchhhHHHHHHHH
Confidence            699999999999976 689999999987443221   1223456788999998753        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++++ |..||....... ..........+..+...+..+.+++.+||..||.+||++.+++++|+.+..
T Consensus       216 ~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         216 WEIFTYGKQPWFQLSNTE-VIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            99998 999987655432 223333344445566688999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=5.9e-27  Score=182.41  Aligned_cols=131  Identities=30%  Similarity=0.430  Sum_probs=101.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ......+||..|+|||++.+       ...++.++|||||||++|
T Consensus       127 vHrDlkp~Nili~~~-~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~il~  198 (332)
T cd05614         127 VYRDIKLENILLDSE-GHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRG-------KGGHGKAVDWWSLGILIF  198 (332)
T ss_pred             EecCCCHHHeEECCC-CCEEEeeCcCCccccccCCCccccccCCccccCHHHhcC-------CCCCCCccccccchhhhh
Confidence            699999999999976 67999999998753222  12234579999999999753       234678999999999999


Q ss_pred             HHHcCCCCCCCCCc--HHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           79 ELLTNRLPFEGMSN--LQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        79 e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      ||++|..||.....  .............+.++..+++.+.+++.+||..||.+||     +++++++
T Consensus       199 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         199 ELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             hhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            99999999964321  1122222233455667778999999999999999999999     6778887

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.94  E-value=9.9e-27  Score=180.37  Aligned_cols=128  Identities=28%  Similarity=0.463  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... .........||+.|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vH~dlkp~NIli~~~-~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  188 (320)
T cd05590         118 IYRDLKLDNVLLDHE-GHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQE--------MLYGPSVDWWAMGVLLYE  188 (320)
T ss_pred             EeCCCCHHHeEECCC-CcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcC--------CCCCCccchhhhHHHHHH
Confidence            699999999999976 679999999987432 2222334679999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF------SQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~------~~~l~  139 (198)
                      |++|..||.+...... . ..........|..++.++.+++.+||..||.+|+++      +++++
T Consensus       189 l~~g~~Pf~~~~~~~~-~-~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~  252 (320)
T cd05590         189 MLCGHAPFEAENEDDL-F-EAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILR  252 (320)
T ss_pred             HhhCCCCCCCCCHHHH-H-HHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHc
Confidence            9999999987664332 2 223344455677799999999999999999999998      66666

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=1e-26  Score=180.53  Aligned_cols=128  Identities=26%  Similarity=0.474  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... .........||+.|+|||++.+        ..++.++|+|||||++||
T Consensus       117 vH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~e  187 (323)
T cd05595         117 VYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--------NDYGRAVDWWGLGVVMYE  187 (323)
T ss_pred             EecCCCHHHEEEcCC-CCEEecccHHhccccCCCCccccccCCcCcCCcccccC--------CCCCchhchhhhHHHHHH
Confidence            699999999999976 679999999987432 2222334679999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      +++|..||.+.........  .......+|..+++++.+++.+||..||.+|+     ++.++++
T Consensus       188 ll~g~~Pf~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         188 MMCGRLPFYNQDHERLFEL--ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHhCCCCCCCCCHHHHHHH--HhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            9999999987654332222  22334456778999999999999999999998     8888887

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=1.3e-26  Score=179.99  Aligned_cols=128  Identities=23%  Similarity=0.422  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++.... ........|++.|+|||++.+        ..++.++||||+|+++||
T Consensus       122 vH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  192 (323)
T cd05584         122 IYRDLKPENILLDAQ-GHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMR--------SGHGKAVDWWSLGALMYD  192 (323)
T ss_pred             ecCCCCHHHeEECCC-CCEEEeeCcCCeecccCCCcccccCCCccccChhhccC--------CCCCCcceecccHHHHHH
Confidence            699999999999976 6799999999874322 222334578999999999853        456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      |++|..||.+........ . .......+|..+++++.+++.+||..||.+||     ++.++++
T Consensus       193 ll~G~~pf~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         193 MLTGAPPFTAENRKKTID-K-ILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HhcCCCCCCCCCHHHHHH-H-HHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            999999998766433222 2 22344567788999999999999999999999     7888887

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=9.2e-26  Score=169.86  Aligned_cols=136  Identities=30%  Similarity=0.546  Sum_probs=104.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +||||||+|||++.+ +.+||+|||+++......     ......++..|+|||.+..        ..++.++|+||||+
T Consensus       120 ~H~dlk~~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~  190 (262)
T cd05058         120 VHRDLAARNCMLDES-FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGV  190 (262)
T ss_pred             cccccCcceEEEcCC-CcEEECCccccccccCCcceeecccccCcCCccccChhHhcc--------CccchHHHHHHHHH
Confidence            699999999999976 679999999987433211     1112345678999998743        56788999999999


Q ss_pred             HHHHHHcC-CCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           76 VLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        76 ~l~e~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++||+++| .+||...... ...........+..+..+++.+.+++.+||..+|++||++.++++.|+.+..
T Consensus       191 ~l~el~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         191 LLWELMTRGAPPYPDVDSF-DITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            99999994 5667655433 2333334444455566788999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=3.9e-26  Score=181.35  Aligned_cols=139  Identities=24%  Similarity=0.338  Sum_probs=99.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc--cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV--TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++....  .......+||+.|+|||++.+        ..++.++|+||+||++|
T Consensus       204 vHrDiKP~NIll~~~-~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~  274 (391)
T PHA03212        204 IHRDIKAENIFINHP-GDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR--------DPYGPAVDIWSAGIVLF  274 (391)
T ss_pred             ccCCCChHhEEEcCC-CCEEEEeCCcccccccccccccccccCccCCCChhhhcC--------CCCCcHHHHHHHHHHHH
Confidence            799999999999976 6799999999864322  122334579999999999853        56889999999999999


Q ss_pred             HHHcCCCCCCCCCcH------HHHHH--------------------------HHHcc--CCC-CCC-----CCCcHHHHH
Q 029154           79 ELLTNRLPFEGMSNL------QAAYA--------------------------AAFKH--ARP-GLP-----EDISPDLAF  118 (198)
Q Consensus        79 e~~~g~~p~~~~~~~------~~~~~--------------------------~~~~~--~~~-~~p-----~~~~~~~~~  118 (198)
                      |+++|..||......      .....                          .....  ..+ ..+     ..++.++.+
T Consensus       275 elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  354 (391)
T PHA03212        275 EMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEY  354 (391)
T ss_pred             HHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHH
Confidence            999999876532210      00000                          00000  000 001     124568899


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154          119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       119 l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      |+.+||..||.+|||+.|+++  +.|+.....
T Consensus       355 Li~~mL~~dP~~Rpta~elL~--hp~f~~~~~  384 (391)
T PHA03212        355 LICKMLAFDAHHRPSAEALLD--FAAFQDIPD  384 (391)
T ss_pred             HHHHHhcCChhhCCCHHHHhc--ChhhccCCC
Confidence            999999999999999999999  777765443

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=1.1e-26  Score=179.76  Aligned_cols=128  Identities=28%  Similarity=0.489  Sum_probs=101.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++... ........+||..|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vHrDlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil~e  188 (316)
T cd05620         118 IYRDLKLDNVMLDRD-GHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG--------LKYTFSVDWWSFGVLLYE  188 (316)
T ss_pred             EecCCCHHHeEECCC-CCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcC--------CCCCcccchhhhHHHHHH
Confidence            699999999999976 679999999987432 1222345679999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS-QIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~-~~l~  139 (198)
                      |++|..||.+...... . .......+..|..++.++.+++.+||..||.+|+++. ++++
T Consensus       189 l~~g~~Pf~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~  247 (316)
T cd05620         189 MLIGQSPFHGDDEDEL-F-ESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRG  247 (316)
T ss_pred             HHhCCCCCCCCCHHHH-H-HHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            9999999987654322 2 2223345566778999999999999999999999974 6664

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.94  E-value=6.8e-27  Score=186.96  Aligned_cols=134  Identities=23%  Similarity=0.286  Sum_probs=103.8

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||+|||||||||..- ...+||+|||.|........  +.+-+..|.|||++.+        ..|+.+.|+|||||++.|
T Consensus       311 IHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy--tYiQSRfYRAPEVILG--------lpY~~~IDmWSLGCIlAE  380 (586)
T KOG0667|consen  311 IHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY--TYIQSRFYRAPEVILG--------LPYDTAIDMWSLGCILAE  380 (586)
T ss_pred             eeccCChhheeeccCCcCceeEEecccccccCCcce--eeeeccccccchhhcc--------CCCCCccceeehhhhHHh
Confidence            899999999999642 23599999999987665433  6677899999999976        789999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--------------------------------------------------CCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--------------------------------------------------GLP  109 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~p  109 (198)
                      |++|.+.|.|....++...+......|                                                  ..|
T Consensus       381 L~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P  460 (586)
T KOG0667|consen  381 LFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGP  460 (586)
T ss_pred             HhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCC
Confidence            999999999887766554332210000                                                  011


Q ss_pred             -C----------CCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          110 -E----------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       110 -~----------~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                       .          .-...+.+++.+||..||..|+|..++++  |.|+.
T Consensus       461 ~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~--Hpfl~  506 (586)
T KOG0667|consen  461 PGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALN--HPFLT  506 (586)
T ss_pred             CCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhc--Ccccc
Confidence             0          01234789999999999999999999999  77776

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.94  E-value=5.3e-26  Score=173.17  Aligned_cols=134  Identities=29%  Similarity=0.573  Sum_probs=105.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ ..+||+|||+++......   ......++..|++||.+.+        ..++.++|+||||+++
T Consensus       146 ~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il  216 (283)
T cd05090         146 VHKDLAARNILIGEQ-LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY--------GKFSSDSDIWSFGVVL  216 (283)
T ss_pred             ehhccccceEEEcCC-CcEEeccccccccccCCcceecccCCCccceecChHHhcc--------CCCCchhhhHHHHHHH
Confidence            699999999999976 679999999997543221   1223445678999998753        5578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |||++ |..||.+..... .............+..+++.+.+++.+||..||.+||++.++++.|..|
T Consensus       217 ~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05090         217 WEIFSFGLQPYYGFSNQE-VIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence            99998 889997765422 2333333444556777899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=1.2e-25  Score=171.07  Aligned_cols=136  Identities=25%  Similarity=0.517  Sum_probs=105.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++......   ......++..|++||.+.+        ..++.++|+||||+++
T Consensus       131 iH~dlkp~nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--------~~~~~~~Dv~slG~il  201 (279)
T cd05111         131 VHRNLAARNILLKSD-SIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF--------GRYTHQSDVWSYGVTV  201 (279)
T ss_pred             eccccCcceEEEcCC-CcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhcc--------CCcCchhhHHHHHHHH
Confidence            699999999999966 679999999997542211   1223456778999998753        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||.+..... ..........+..+..++.++..++.+||..||++||++.++++.|..+..
T Consensus       202 ~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         202 WEMMSYGAEPYAGMRPHE-VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            99998 999998765432 222233344455566678899999999999999999999999998877643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=3e-27  Score=183.62  Aligned_cols=128  Identities=27%  Similarity=0.488  Sum_probs=103.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||..|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vHrDikp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  188 (325)
T cd05594         118 VYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED--------NDYGRAVDWWGLGVVMYE  188 (325)
T ss_pred             EecCCCCCeEEECCC-CCEEEecCCCCeecCCCCcccccccCCcccCCHHHHcc--------CCCCCccccccccceeee
Confidence            699999999999976 679999999987432 2222344679999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      |++|..||.+.......  .........+|..+++++.+++.+||..||.+|+     ++.++++
T Consensus       189 l~tG~~Pf~~~~~~~~~--~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         189 MMCGRLPFYNQDHEKLF--ELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             eccCCCCCCCCCHHHHH--HHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            99999999876543322  2223345566788999999999999999999996     8999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=2.4e-26  Score=164.20  Aligned_cols=132  Identities=25%  Similarity=0.473  Sum_probs=111.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|+|++.. +.+||+|||.+.... .....+.|||.-|.+||...        ...++..+|+|++|++.||+
T Consensus       146 IhRdiKpenlLlg~~-~~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~--------~~~hd~~Vd~w~lgvl~yef  215 (281)
T KOG0580|consen  146 IHRDIKPENLLLGSA-GELKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVE--------GRGHDKFVDLWSLGVLCYEF  215 (281)
T ss_pred             ccCCCCHHHhccCCC-CCeeccCCCceeecC-CCCceeeecccccCCHhhcC--------CCCccchhhHHHHHHHHHHH
Confidence            799999999999977 679999999997655 33456789999999999985        47789999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +.|.+||..... ...+ ..+......+|..++.++.++|.+|+..+|.+|....|++.  +.|+.
T Consensus       216 lvg~ppFes~~~-~etY-krI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~--hpwI~  277 (281)
T KOG0580|consen  216 LVGLPPFESQSH-SETY-KRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMD--HPWIV  277 (281)
T ss_pred             HhcCCchhhhhh-HHHH-HHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhh--hHHHH
Confidence            999999987663 2223 33445566778999999999999999999999999999998  66654

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.4e-26  Score=177.31  Aligned_cols=131  Identities=22%  Similarity=0.350  Sum_probs=104.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++.....  ....+|++.|+|||++.+        ..++.++||||+||++|+|
T Consensus       123 ~H~dlkp~NIli~~~-~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~~l  191 (291)
T cd05612         123 VYRDLKPENILLDKE-GHIKLTDFGFAKKLRDR--TWTLCGTPEYLAPEVIQS--------KGHNKAVDWWALGILIYEM  191 (291)
T ss_pred             eecCCCHHHeEECCC-CCEEEEecCcchhccCC--cccccCChhhcCHHHHcC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 67999999998754322  224578999999998753        5578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|..||.+....... .. .......+|..+++.+.+++.+||..||.+|++     ++++++  +.|+.
T Consensus       192 ~~g~~pf~~~~~~~~~-~~-i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~--h~~~~  258 (291)
T cd05612         192 LVGYPPFFDDNPFGIY-EK-ILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN--HRWFK  258 (291)
T ss_pred             HhCCCCCCCCCHHHHH-HH-HHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc--Ccccc
Confidence            9999999876543322 22 223445667778999999999999999999995     888888  55543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=1.9e-26  Score=179.09  Aligned_cols=128  Identities=25%  Similarity=0.422  Sum_probs=101.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+|++.|+|||.+.+        ..++.++|+|||||++|+
T Consensus       123 vHrdlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  193 (324)
T cd05589         123 VYRDLKLDNLLLDTE-GFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTE--------TSYTRAVDWWGLGVLIYE  193 (324)
T ss_pred             EecCCCHHHeEECCC-CcEEeCcccCCccCCCCCCcccccccCccccCHhHhcC--------CCCCcccchhhHHHHHHH
Confidence            699999999999977 6799999999874322 222345679999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      |++|..||.+.........  ........|..+++++.+++.+||..||.+||     ++.++++
T Consensus       194 l~~G~~pf~~~~~~~~~~~--i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         194 MLVGESPFPGDDEEEVFDS--IVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHhCCCCCCCCCHHHHHHH--HHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            9999999987654333222  22334556778999999999999999999999     5777776

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=4.2e-26  Score=178.34  Aligned_cols=138  Identities=25%  Similarity=0.357  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++.....  ....+||..|+|||++.+       ...++.++||||+||++|+|
T Consensus       140 vHrdikp~Nil~~~~-~~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~el  209 (343)
T cd07878         140 IHRDLKPSNVAVNED-CELRILDFGLARQADDE--MTGYVATRWYRAPEIMLN-------WMHYNQTVDIWSVGCIMAEL  209 (343)
T ss_pred             ecccCChhhEEECCC-CCEEEcCCccceecCCC--cCCccccccccCchHhcC-------CccCCchhhhHhHHHHHHHH
Confidence            699999999999976 67999999999754332  234578999999998753       24578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHcc---------------------CCCCC--------CCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKH---------------------ARPGL--------PEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~~~--------p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+..............                     ..+..        ....++.+.+|+.+||..||.+|
T Consensus       210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R  289 (343)
T cd07878         210 LKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKR  289 (343)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhC
Confidence            99999997655332221110000                     00001        12356678899999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCC
Q 029154          132 PSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~  150 (198)
                      ||+.++++  +.|+.....
T Consensus       290 ~s~~ell~--hp~~~~~~~  306 (343)
T cd07878         290 ISASEALA--HPYFSQYHD  306 (343)
T ss_pred             CCHHHHhc--CcchhccCC
Confidence            99999998  777765443

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=6e-26  Score=171.70  Aligned_cols=134  Identities=28%  Similarity=0.571  Sum_probs=105.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||+++........   ....++..|++||.+.        ...++.++|+|||||++
T Consensus       135 ~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--------~~~~~~~~Dv~SlG~il  205 (273)
T cd05035         135 IHRDLAARNCMLRED-MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA--------DRVYTSKSDVWAFGVTM  205 (273)
T ss_pred             eccccchheEEECCC-CeEEECCccceeeccccccccccccccCCccccCHhhcc--------cCCCCcccchHHHHHHH
Confidence            699999999999976 67999999998754322211   1123456899999874        35678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ||+++ |..||.+..... .............+..++.++.+++.+||..||++||++.++++.|+.+
T Consensus       206 ~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         206 WEIATRGQTPYPGVENHE-IYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99998 889997765433 3334444455667788999999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=8.1e-26  Score=174.89  Aligned_cols=136  Identities=26%  Similarity=0.505  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++........   ....++..|++||.+..        ..++.++|+||||+++
T Consensus       131 iH~dlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~--------~~~~~~~Di~slGv~l  201 (316)
T cd05108         131 VHRDLAARNVLVKTP-QHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILH--------RIYTHQSDVWSYGVTV  201 (316)
T ss_pred             eccccchhheEecCC-CcEEEccccccccccCCCcceeccCCccceeecChHHhcc--------CCCCchhhhHHHHHHH
Confidence            699999999999976 67999999999854322211   12234668999998753        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||.+..... .............+..++.++.+++.+||..+|.+||++.+++..+.....
T Consensus       202 ~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         202 WELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            99997 999998755332 223333444555567788999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.94  E-value=3e-26  Score=174.81  Aligned_cols=130  Identities=25%  Similarity=0.306  Sum_probs=97.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||++......  .......|+..|+|||++.+        ..++.++|+||+||++|
T Consensus       122 ~H~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DiwslGvil~  192 (287)
T cd07848         122 VHRDIKPENLLISHN-DVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG--------APYGKAVDMWSVGCILG  192 (287)
T ss_pred             ecCCCCHHHEEEcCC-CcEEEeeccCcccccccccccccccccccccCCcHHHcC--------CCCCCchhHHhHHHHHH
Confidence            699999999999976 67999999999754322  12234578999999999853        45788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccC-----------------CCCC-------------CCCCcHHHHHHHHHhcccCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHA-----------------RPGL-------------PEDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~~-------------p~~~~~~~~~l~~~~l~~dp  128 (198)
                      |+++|+.||.+...............                 ....             ...++.++.+|+.+||..||
T Consensus       193 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P  272 (287)
T cd07848         193 ELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNP  272 (287)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCc
Confidence            99999999987654333221110000                 0000             12367789999999999999


Q ss_pred             CCCCCHHHHHH
Q 029154          129 NLRPSFSQIIR  139 (198)
Q Consensus       129 ~~Rps~~~~l~  139 (198)
                      .+|||++++++
T Consensus       273 ~~R~s~~~~l~  283 (287)
T cd07848         273 TDRYLTEQCLN  283 (287)
T ss_pred             ccCCCHHHHhc
Confidence            99999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.93  E-value=9.4e-26  Score=172.33  Aligned_cols=136  Identities=24%  Similarity=0.479  Sum_probs=106.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++......   ......++..|+|||.+.+        ..++.++|+||||+++
T Consensus       142 ~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDiwslG~il  212 (288)
T cd05093         142 VHRDLATRNCLVGEN-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY--------RKFTTESDVWSLGVVL  212 (288)
T ss_pred             eecccCcceEEEccC-CcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc--------CCCCchhhHHHHHHHH
Confidence            699999999999976 679999999987543221   1123345778999998753        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |+|++ |..||....... .............+..++.++.+++.+||..||.+||++.+++..|+.+..
T Consensus       213 ~~l~t~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         213 WEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            99998 899997765433 223333334445566788999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.93  E-value=8.9e-27  Score=181.28  Aligned_cols=126  Identities=22%  Similarity=0.345  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++.....  ....+||+.|+|||++.+        ..++.++|+|||||++|+|
T Consensus       140 vH~dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~el  208 (329)
T PTZ00263        140 IYRDLKPENLLLDNK-GHVKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQS--------KGHGKAVDWWTMGVLLYEF  208 (329)
T ss_pred             eecCCCHHHEEECCC-CCEEEeeccCceEcCCC--cceecCChhhcCHHHHcC--------CCCCCcceeechHHHHHHH
Confidence            699999999999976 68999999999754332  224578999999999853        5578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~  139 (198)
                      ++|..||.+....... .. .......+|..++..+.+|+.+||..||.+|++     +.+++.
T Consensus       209 ltg~~pf~~~~~~~~~-~~-i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        209 IAGYPPFFDDTPFRIY-EK-ILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HcCCCCCCCCCHHHHH-HH-HhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            9999999876543322 22 233455677789999999999999999999986     688887

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.93  E-value=1e-25  Score=171.13  Aligned_cols=132  Identities=28%  Similarity=0.522  Sum_probs=103.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||+++......   ......++..|+|||++.+        ..++.++|+||||+++
T Consensus       144 ~h~dlkp~nili~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  214 (280)
T cd05049         144 VHRDLATRNCLVGYD-LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY--------RKFTTESDVWSFGVVL  214 (280)
T ss_pred             eccccccceEEEcCC-CeEEECCcccceecccCcceecCCCCcccceecChhhhcc--------CCcchhhhHHHHHHHH
Confidence            699999999999977 789999999987432211   1123345778999998853        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |||++ |..||.+....... ...........+..++..+.+++.+||..||.+||++.|+++.|+
T Consensus       215 ~e~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         215 WEIFTYGKQPWYGLSNEEVI-ECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHhcCCCCCCCCCHHHHH-HHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            99998 99999776543322 223333444556678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.93  E-value=3.3e-26  Score=174.62  Aligned_cols=130  Identities=25%  Similarity=0.306  Sum_probs=98.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............|+..|+|||++.+        ..++.++|+||+||++|+|
T Consensus       130 vH~dikp~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DiwslG~~l~~l  200 (288)
T cd07863         130 VHRDLKPENILVTSG-GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQ--------STYATPVDMWSVGCIFAEM  200 (288)
T ss_pred             ecCCCCHHHEEECCC-CCEEECccCccccccCcccCCCccccccccCchHhhC--------CCCCCcchhhhHHHHHHHH
Confidence            699999999999976 6799999999976543333344578999999998853        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHcc-------CC-----------C-------CCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKH-------AR-----------P-------GLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~-------~~-----------~-------~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|.+||.+..............       .+           .       .....++..+.+++.+||+.||.+||++.
T Consensus       201 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  280 (288)
T cd07863         201 FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAF  280 (288)
T ss_pred             HhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHH
Confidence            99999997765433221111000       00           0       01124677889999999999999999999


Q ss_pred             HHHH
Q 029154          136 QIIR  139 (198)
Q Consensus       136 ~~l~  139 (198)
                      +++.
T Consensus       281 ~~l~  284 (288)
T cd07863         281 RALQ  284 (288)
T ss_pred             HHhc
Confidence            9987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.93  E-value=1.3e-26  Score=179.83  Aligned_cols=128  Identities=26%  Similarity=0.468  Sum_probs=101.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+|||||++||
T Consensus       123 vHrDlkp~Nill~~~-~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~e  193 (323)
T cd05616         123 IYRDLKLDNVMLDSE-GHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY--------QPYGKSVDWWAFGVLLYE  193 (323)
T ss_pred             EecCCCHHHeEECCC-CcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcC--------CCCCCccchhchhHHHHH
Confidence            699999999999976 689999999987432 2222335679999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF-----SQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~-----~~~l~  139 (198)
                      |++|..||.+....... .. ........|..++.++.+++.+||..||.+|++.     .++++
T Consensus       194 lltg~~Pf~~~~~~~~~-~~-i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~  256 (323)
T cd05616         194 MLAGQAPFEGEDEDELF-QS-IMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  256 (323)
T ss_pred             HHhCCCCCCCCCHHHHH-HH-HHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence            99999999876643332 22 2234456677899999999999999999999974     55654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=2.5e-26  Score=177.81  Aligned_cols=128  Identities=30%  Similarity=0.513  Sum_probs=101.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vH~dlkp~Nill~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~e  188 (316)
T cd05592         118 IYRDLKLDNVLLDKD-GHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKG--------QKYNESVDWWSFGVLLYE  188 (316)
T ss_pred             EeCCCCHHHeEECCC-CCEEEccCcCCeECCCCCCccccccCCccccCHHHHcC--------CCCCCcccchhHHHHHHH
Confidence            699999999999976 6799999999974322 222344679999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS-QIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~-~~l~  139 (198)
                      |++|..||.+....... . ......+..|..++.++.+++.+||..||.+||++. ++++
T Consensus       189 ll~G~~Pf~~~~~~~~~-~-~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         189 MLIGQSPFHGEDEDELF-D-SILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHhCCCCCCCCCHHHHH-H-HHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            99999999876643322 2 223445667788999999999999999999999865 5655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=5.6e-26  Score=193.38  Aligned_cols=141  Identities=23%  Similarity=0.400  Sum_probs=106.5

Q ss_pred             CCCCCCCCCeEEcCC----------------CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCC
Q 029154            1 MGKFMKEDNLLLTPD----------------QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY   64 (198)
Q Consensus         1 iH~dlKp~NIll~~~----------------~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~   64 (198)
                      |||||||+||||+.+                ...+||+|||++............+||+.|+|||++.+      ....+
T Consensus       147 VHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~g------e~~~~  220 (1021)
T PTZ00266        147 LHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLH------ETKSY  220 (1021)
T ss_pred             eeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhc------cCCCC
Confidence            799999999999642                13489999999986544333445679999999998753      23457


Q ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        65 ~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +.++|||||||++|+|++|..||................. .......+.++.+||.+||..+|.+||++.+++.  +.+
T Consensus       221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p-~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~--h~~  297 (1021)
T PTZ00266        221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGP-DLPIKGKSKELNILIKNLLNLSAKERPSALQCLG--YQI  297 (1021)
T ss_pred             CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCC-CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc--cHH
Confidence            8899999999999999999999987665544433332222 1112347899999999999999999999999997  556


Q ss_pred             HhhcCC
Q 029154          145 LFTLRP  150 (198)
Q Consensus       145 ~~~~~~  150 (198)
                      +....+
T Consensus       298 ik~i~~  303 (1021)
T PTZ00266        298 IKNVGP  303 (1021)
T ss_pred             HhhcCC
Confidence            554443

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-26  Score=183.99  Aligned_cols=141  Identities=30%  Similarity=0.552  Sum_probs=109.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      ||||||..||+|..+ ..|||+|||++.....   ...+....|...|||||++..     .+...|+..+|||+||+++
T Consensus       510 IHrDLKSnNIFl~~~-~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRm-----qd~nPfS~qSDVYaFGiV~  583 (678)
T KOG0193|consen  510 IHRDLKSNNIFLHED-LKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRM-----QDDNPFSFQSDVYAFGIVW  583 (678)
T ss_pred             hhhhccccceEEccC-CcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhh-----cccCCCCcccchhhhhHHH
Confidence            799999999999966 7899999999863221   222344568899999999863     3567899999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCC---CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGL---PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||++|..||......+..+........+..   -..++.++..|+..||..++++||.+.+|+..|+.++..
T Consensus       584 YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  584 YELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             HHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            9999999999954444333333322222222   244677999999999999999999999999988887664

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=7e-26  Score=170.55  Aligned_cols=130  Identities=32%  Similarity=0.553  Sum_probs=104.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.++|+|||+++.......    .....|+..|+|||.+.+        ..++.++|+||+|++
T Consensus       126 ~H~dl~p~nilv~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  196 (263)
T cd06625         126 VHRDIKGANILRDSA-GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG--------EGYGRKADVWSVGCT  196 (263)
T ss_pred             ecCCCCHHHEEEcCC-CCEEEeecccceeccccccccccccCCCcCccccCcceecc--------CCCCchhhhHHHHHH
Confidence            699999999999966 6799999999864322111    123457889999999854        457889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +|++++|+.||.....................+..++..+.+++.+||..+|.+||++.++++
T Consensus       197 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         197 VVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             HHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            999999999998766554444444444556677889999999999999999999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=1.5e-26  Score=179.42  Aligned_cols=128  Identities=27%  Similarity=0.424  Sum_probs=102.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||++..... .......+|+..|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vHrDikp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~e  188 (321)
T cd05591         118 IYRDLKLDNILLDAE-GHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQE--------LEYGPSVDWWALGVLMYE  188 (321)
T ss_pred             eccCCCHHHeEECCC-CCEEEeecccceecccCCccccccccCccccCHHHHcC--------CCCCCccceechhHHHHH
Confidence            699999999999976 6899999999874322 222334578999999998753        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-------CHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-------SFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-------s~~~~l~  139 (198)
                      |++|..||.+....... .. ........|..++.++.+++.+||..||.+|+       ++.++++
T Consensus       189 l~tg~~Pf~~~~~~~~~-~~-i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         189 MMAGQPPFEADNEDDLF-ES-ILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HhcCCCCCCCCCHHHHH-HH-HHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            99999999876643332 22 22334456677899999999999999999999       7888887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.93  E-value=9.2e-26  Score=179.56  Aligned_cols=136  Identities=29%  Similarity=0.553  Sum_probs=107.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....++..|+|||.+.+        ..++.++||||||+++
T Consensus       259 vH~dikp~Nill~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DiwSlGvil  329 (400)
T cd05105         259 VHRDLAARNVLLAQG-KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD--------NLYTTLSDVWSYGILL  329 (400)
T ss_pred             eCCCCChHhEEEeCC-CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC--------CCCCchhhHHHHHHHH
Confidence            699999999999976 6799999999875432211   122356778999998753        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ||+++ |..||..................+..+..++.++.+++.+||..||++||++.++.++|..++
T Consensus       330 ~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         330 WEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            99996 889997655433333344444555667778999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.93  E-value=5.6e-26  Score=179.55  Aligned_cols=137  Identities=30%  Similarity=0.437  Sum_probs=101.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||+++.....  .......++..|+|||++.+       ...++.++|+||+||++|
T Consensus       125 vH~dlkp~Nili~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~il~  196 (372)
T cd07853         125 LHRDIKPGNLLVNSN-CVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG-------SRHYTSAVDIWSVGCIFA  196 (372)
T ss_pred             eCCCCChHHEEECCC-CCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcC-------CCCCCcHHHHHhHHHHHH
Confidence            699999999999976 68999999999754322  12234567899999998753       245788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHH-----------------------ccCCC-------CCCCCCcHHHHHHHHHhcccCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAF-----------------------KHARP-------GLPEDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~-------~~p~~~~~~~~~l~~~~l~~dp  128 (198)
                      ||++|+.||.+............                       ....+       ......++++.+|+.+||..||
T Consensus       197 el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP  276 (372)
T cd07853         197 ELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDP  276 (372)
T ss_pred             HHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCCh
Confidence            99999999987654332211100                       00000       1223467899999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHhh
Q 029154          129 NLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       129 ~~Rps~~~~l~~l~~~~~~  147 (198)
                      .+|||+.++++  +.|+..
T Consensus       277 ~~R~t~~e~l~--hp~~~~  293 (372)
T cd07853         277 DKRISAADALA--HPYLDE  293 (372)
T ss_pred             hhCcCHHHHhc--CHhhCC
Confidence            99999999998  666554

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.93  E-value=1.4e-25  Score=170.47  Aligned_cols=134  Identities=26%  Similarity=0.535  Sum_probs=103.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....++..|++||.+.+        ..++.++|+|||||++
T Consensus       131 iH~dlkp~Nil~~~~-~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~slG~~l  201 (279)
T cd05109         131 VHRDLAARNVLVKSP-NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILH--------RRFTHQSDVWSYGVTV  201 (279)
T ss_pred             eccccccceEEEcCC-CcEEECCCCceeecccccceeecCCCccchhhCCHHHhcc--------CCCCchhHHHHHHHHH
Confidence            699999999999866 6799999999975432221   111234678999998753        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ||+++ |..||....... ..........+..+..++.++.+++.+||..||.+||++.++++.|+..
T Consensus       202 ~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~  268 (279)
T cd05109         202 WELMTFGAKPYDGIPARE-IPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM  268 (279)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            99998 889987655322 2223333444555667889999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.93  E-value=2.5e-26  Score=178.42  Aligned_cols=128  Identities=25%  Similarity=0.466  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++... ........+||..|+|||++.+        ..++.++|+||+||++|+
T Consensus       123 vH~dlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil~e  193 (324)
T cd05587         123 IYRDLKLDNVMLDAE-GHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAY--------QPYGKSVDWWAFGVLLYE  193 (324)
T ss_pred             EecCCCHHHeEEcCC-CCEEEeecCcceecCCCCCceeeecCCccccChhhhcC--------CCCCcccchhhhHHHHHH
Confidence            699999999999976 679999999986432 1222334578999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF-----SQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~-----~~~l~  139 (198)
                      |++|+.||.+....... . .........|..++.++.+++.+||..||.+|++.     .++++
T Consensus       194 lltG~~pf~~~~~~~~~-~-~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  256 (324)
T cd05587         194 MLAGQPPFDGEDEDELF-Q-SIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE  256 (324)
T ss_pred             HHhCCCCCCCCCHHHHH-H-HHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            99999999876643322 2 22344556677899999999999999999999976     56655

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.93  E-value=1.1e-25  Score=169.02  Aligned_cols=131  Identities=30%  Similarity=0.587  Sum_probs=102.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||+++......  ....++..|++||++..        ..++.++|+|||||++|++
T Consensus       124 ~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~i~~~l  192 (256)
T cd05082         124 VHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALRE--------KKFSTKSDVWSFGILLWEI  192 (256)
T ss_pred             eccccchheEEEcCC-CcEEecCCccceeccccC--CCCccceeecCHHHHcc--------CCCCchhhhHHHHHHHHHH
Confidence            699999999999976 679999999987433221  23345678999998743        5678899999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++ |..||..... ............+..+..+++.+.+++.+||..+|.+||++.++++.|+.
T Consensus       193 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         193 YSFGRVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HhCCCCCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            97 9999876543 22222333344555667789999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.5e-26  Score=178.98  Aligned_cols=129  Identities=23%  Similarity=0.353  Sum_probs=100.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++....  .....+||+.|+|||++.+        ..++.++||||+||++|||
T Consensus       123 vH~dlkp~Nil~~~~-~~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~el  191 (333)
T cd05600         123 IHRDLKPENFLIDAS-GHIKLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRG--------KGYDFTVDYWSLGCMLYEF  191 (333)
T ss_pred             cccCCCHHHEEECCC-CCEEEEeCcCCccccc--ccCCcccCccccChhHhcC--------CCCCCccceecchHHHhhh
Confidence            799999999999976 6899999999975433  2345679999999999853        4678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC------CCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      ++|..||.+...................|      ..+++++.+++.+||..+|.+||++.+++++
T Consensus       192 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         192 LCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             hhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            99999998765433222211111111111      1468999999999999999999999999983

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.93  E-value=1.7e-25  Score=169.97  Aligned_cols=132  Identities=30%  Similarity=0.572  Sum_probs=103.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||+++.......   .....++..|+|||.+.+        ..++.++|+||||+++
T Consensus       141 vH~dlkp~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l  211 (277)
T cd05062         141 VHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD--------GVFTTYSDVWSFGVVL  211 (277)
T ss_pred             ccCCcchheEEEcCC-CCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc--------CCcCchhHHHHHHHHH
Confidence            699999999999976 6799999999874432211   112345778999998753        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||+++ |..||.+..... .............+..++..+.+++.+||..||.+||++.++++.|+
T Consensus       212 ~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         212 WEIATLAEQPYQGMSNEQ-VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            99998 688987765432 22333344445567778899999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.93  E-value=4.2e-26  Score=178.90  Aligned_cols=137  Identities=28%  Similarity=0.416  Sum_probs=112.3

Q ss_pred             CCCCCCCCCeEEcCCC---CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ---KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~---~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|+|+....   ..+|++|||++............+||+.|+|||++..        ..|+..+|+||.|+++
T Consensus       157 vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~--------~~y~~~~DiWS~Gvi~  228 (382)
T KOG0032|consen  157 VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGG--------RPYGDEVDVWSIGVIL  228 (382)
T ss_pred             eeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcC--------CCCCcccchhHHHHHH
Confidence            6999999999997542   3699999999987666556778899999999999853        6789999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCC--CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |.|++|.+||.+................  .+..+.++..+.+++.+++..||..|+++.++++  |.|+..
T Consensus       229 yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~--HpWi~~  298 (382)
T KOG0032|consen  229 YILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ--HPWIKS  298 (382)
T ss_pred             HHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc--CccccC
Confidence            9999999999988765554433333222  2334568999999999999999999999999999  677554

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.93  E-value=1e-25  Score=173.46  Aligned_cols=139  Identities=31%  Similarity=0.540  Sum_probs=105.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||++.............++..|++||.+.+        ..++.++|+||||+++|++
T Consensus       146 ~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~el  216 (303)
T cd05088         146 IHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--------SVYTTNSDVWSYGVLLWEI  216 (303)
T ss_pred             cccccchheEEecCC-CcEEeCccccCcccchhhhcccCCCcccccCHHHHhc--------cCCcccccchhhhhHHHHH
Confidence            699999999999976 6799999999864321111111234567999998743        4578899999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ++ |..||.+..... .............+..+++++.+++.+||..+|.+||++.++++.|+.++....
T Consensus       217 lt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~  285 (303)
T cd05088         217 VSLGGTPYCGMTCAE-LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  285 (303)
T ss_pred             HhcCCCCcccCChHH-HHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence            98 999997655432 222222333444566688999999999999999999999999999988766543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=2.1e-26  Score=179.19  Aligned_cols=130  Identities=24%  Similarity=0.461  Sum_probs=101.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++... ........+||..|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~~l~e  188 (329)
T cd05588         118 IYRDLKLDNVLLDAE-GHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRG--------EDYGFSVDWWALGVLMFE  188 (329)
T ss_pred             EecCCCHHHeEECCC-CCEEECcCccccccccCCCccccccCCccccCHHHHcC--------CCCCCccceechHHHHHH
Confidence            699999999999976 679999999987422 2222345679999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCC-------cHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC------HHHHHH
Q 029154           80 LLTNRLPFEGMS-------NLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS------FSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps------~~~~l~  139 (198)
                      +++|..||....       ................+|..++.++.+++.+||..||.+|++      +.++++
T Consensus       189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         189 MMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            999999996311       111112223334555678889999999999999999999987      677776

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.4e-26  Score=178.63  Aligned_cols=130  Identities=21%  Similarity=0.356  Sum_probs=106.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |-|||||+|||||.. ++++|+|+|+|............+||.+|||||++..        ..|+...|+||+||++|||
T Consensus       309 VYRDLKPeNILLDd~-GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~n--------e~Y~~s~Dwf~lGCllYem  379 (591)
T KOG0986|consen  309 VYRDLKPENILLDDH-GHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQN--------EVYDFSPDWFSLGCLLYEM  379 (591)
T ss_pred             eeccCChhheeeccC-CCeEeeccceEEecCCCCccccccCcccccCHHHHcC--------CcccCCccHHHHHhHHHHH
Confidence            469999999999966 8999999999987777777777799999999999863        5699999999999999999


Q ss_pred             HcCCCCCCCCCcHHH--HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 029154           81 LTNRLPFEGMSNLQA--AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~  139 (198)
                      +.|+.||........  .............++.+++++.++...+|..||.+|..     ++++.+
T Consensus       380 i~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~  445 (591)
T KOG0986|consen  380 IAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE  445 (591)
T ss_pred             HcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhh
Confidence            999999975443222  12233334455677889999999999999999999964     556665

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=3.4e-26  Score=177.20  Aligned_cols=128  Identities=27%  Similarity=0.456  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++.... .......+|+..|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwslGvil~~  188 (318)
T cd05570         118 IYRDLKLDNVLLDSE-GHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSY--------QPYGPAVDWWALGVLLYE  188 (318)
T ss_pred             EccCCCHHHeEECCC-CcEEecccCCCeecCcCCCcccceecCccccCHHHhcC--------CCCCcchhhhhHHHHHHH
Confidence            699999999999976 6799999999874322 222234578999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF-----SQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~-----~~~l~  139 (198)
                      +++|..||.+....... . .........|..++.++.+++.+||..||.+||++     .++++
T Consensus       189 l~~G~~pf~~~~~~~~~-~-~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         189 MLAGQSPFEGDDEDELF-Q-SILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HhhCCCCCCCCCHHHHH-H-HHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            99999999876543322 2 22334455677889999999999999999999999     88876

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.93  E-value=1.2e-25  Score=172.03  Aligned_cols=135  Identities=32%  Similarity=0.639  Sum_probs=106.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||+++.......   .....++..|++||.+.+        ..++.++|+|||||++
T Consensus       154 vH~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  224 (293)
T cd05053         154 IHRDLAARNVLVTED-HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD--------RVYTHQSDVWSFGVLL  224 (293)
T ss_pred             cccccceeeEEEcCC-CeEEeCccccccccccccceeccCCCCCCccccCHHHhcc--------CCcCcccceeehhhHH
Confidence            699999999999976 6899999999975432211   112234567999998743        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ||+++ |..||.+.... ...........+..+...+.++.+++.+||..||.+|||+.++++.|+.++
T Consensus       225 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         225 WEIFTLGGSPYPGIPVE-ELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHhcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            99997 88999765533 333334444555667778899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.93  E-value=9.5e-26  Score=173.96  Aligned_cols=140  Identities=21%  Similarity=0.326  Sum_probs=103.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++..... .......++..|+|||++.+       ...++.++|+||+|+++|+
T Consensus       126 vH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~il~e  197 (309)
T cd07872         126 LHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG-------SSEYSTQIDMWGVGCIFFE  197 (309)
T ss_pred             ecCCCCHHHEEECCC-CCEEECccccceecCCCccccccccccccccCCHHHhC-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998753322 22234567899999998753       2457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc---------------------CCC-------CCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH---------------------ARP-------GLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~-------~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|+.||.+..............                     .+.       .....+++++.+++.+||..||.+|
T Consensus       198 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  277 (309)
T cd07872         198 MASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKR  277 (309)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhC
Confidence            999999998755432211111000                     000       0112467889999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCC
Q 029154          132 PSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~  150 (198)
                      ||+.++++  +.|+.....
T Consensus       278 ~t~~e~l~--h~~~~~~~~  294 (309)
T cd07872         278 ISAEEAMK--HAYFRSLGT  294 (309)
T ss_pred             CCHHHHhc--Chhhhhccc
Confidence            99999999  777765543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=2e-26  Score=179.29  Aligned_cols=130  Identities=25%  Similarity=0.469  Sum_probs=100.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||..|+|||++.+        ..++.++|+|||||++|+
T Consensus       118 vH~Dikp~Nili~~~-~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  188 (329)
T cd05618         118 IYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG--------EDYGFSVDWWALGVLMFE  188 (329)
T ss_pred             eeCCCCHHHEEECCC-CCEEEeeCCccccccCCCCccccccCCccccCHHHHcC--------CCCCCccceecccHHHHH
Confidence            699999999999977 6799999999874322 222334678999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCC-------cHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC------HHHHHH
Q 029154           80 LLTNRLPFEGMS-------NLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS------FSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps------~~~~l~  139 (198)
                      |++|..||....       ................+|..++..+.+++.+||..||.+|++      +.++++
T Consensus       189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05618         189 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  261 (329)
T ss_pred             HhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence            999999995211       111112223334555678889999999999999999999998      467776

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=1.6e-25  Score=168.60  Aligned_cols=133  Identities=32%  Similarity=0.548  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||++........  .....++..|++||.+..        ..++.++|+||||+++|
T Consensus       125 ~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  195 (261)
T cd05072         125 IHRDLRAANVLVSES-LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF--------GSFTIKSDVWSFGILLY  195 (261)
T ss_pred             eccccchhhEEecCC-CcEEECCCccceecCCCceeccCCCccceecCCHHHhcc--------CCCChhhhhhhhHHHHH
Confidence            699999999999976 6799999999975433221  122345678999998753        45788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++++ |..||.+...... ..........+.+..++.++.+++.+||..+|++||+++++++.|++
T Consensus       196 ~l~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         196 EIVTYGKIPYPGMSNSDV-MSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHccCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            9998 9999977554332 23333344445556688999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=1.4e-25  Score=172.69  Aligned_cols=133  Identities=28%  Similarity=0.493  Sum_probs=98.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++......   ......++..|+|||++..        ..++.++|+||||+++
T Consensus       160 vH~dlkp~Nill~~~-~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l  230 (304)
T cd05096         160 VHRDLATRNCLVGEN-LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM--------GKFTTASDVWAFGVTL  230 (304)
T ss_pred             cccCcchhheEEcCC-ccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc--------CCCCchhhhHHHHHHH
Confidence            699999999999976 679999999997432211   1123345788999998753        5678999999999999


Q ss_pred             HHHHc--CCCCCCCCCcHHHHHHH--HHc----cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT--NRLPFEGMSNLQAAYAA--AFK----HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~--g~~p~~~~~~~~~~~~~--~~~----~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||+++  +..||.+..........  ...    ......+..++..+.+++.+||..||.+||++.++.+.|+
T Consensus       231 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         231 WEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            99986  56788765433221111  001    1112335567899999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.93  E-value=2.4e-26  Score=179.58  Aligned_cols=126  Identities=21%  Similarity=0.310  Sum_probs=101.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ....+||+.|+|||++.+        ..++.++|+||+||++|||
T Consensus       153 vHrDLkp~NILl~~~-~~ikL~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~el  221 (340)
T PTZ00426        153 VYRDLKPENLLLDKD-GFIKMTDFGFAKVVDTR--TYTLCGTPEYIAPEILLN--------VGHGKAADWWTLGIFIYEI  221 (340)
T ss_pred             EccCCCHHHEEECCC-CCEEEecCCCCeecCCC--cceecCChhhcCHHHHhC--------CCCCccccccchhhHHHHH
Confidence            699999999999966 68999999999754322  234579999999999853        5578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      ++|..||.+....... .. ........|..+++.+.+++.+||..||.+|+     +++++++
T Consensus       222 l~G~~Pf~~~~~~~~~-~~-i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        222 LVGCPPFYANEPLLIY-QK-ILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             hcCCCCCCCCCHHHHH-HH-HhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            9999999876643322 22 22334456778899999999999999999995     8999888

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.93  E-value=3.2e-25  Score=170.62  Aligned_cols=137  Identities=29%  Similarity=0.617  Sum_probs=107.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....++..|+|||++.+        ..++.++|+||||+++
T Consensus       159 vH~dlkp~Nili~~~-~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l  229 (304)
T cd05101         159 IHRDLAARNVLVTEN-NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD--------RVYTHQSDVWSFGVLM  229 (304)
T ss_pred             eecccccceEEEcCC-CcEEECCCccceecccccccccccCCCCCceeeCchhhcc--------CCCCchhhHHHHHHHH
Confidence            699999999999966 6799999999975432111   122345678999998753        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++++ |..||.+... ...............+..++..+.+++.+||..+|.+||++.++++.|+.++..
T Consensus       230 ~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         230 WEIFTLGGSPYPGIPV-EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HHHHcCCCCCcccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            99998 7888876543 333333444444556677899999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=4.2e-26  Score=176.57  Aligned_cols=128  Identities=29%  Similarity=0.540  Sum_probs=100.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... ........||..|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vHrdikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~e  188 (316)
T cd05619         118 VYRDLKLDNILLDTD-GHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLG--------QKYNTSVDWWSFGVLLYE  188 (316)
T ss_pred             EeCCCCHHHEEECCC-CCEEEccCCcceECCCCCCceeeecCCccccCHHHHcC--------CCCCchhhhhhHHHHHHH
Confidence            699999999999976 6799999999874321 122334578999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS-QIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~-~~l~  139 (198)
                      |++|..||.+...... ... .....+..|..++.++.+++.+||..||.+|+++. ++++
T Consensus       189 l~~G~~pf~~~~~~~~-~~~-i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         189 MLIGQSPFHGHDEEEL-FQS-IRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHhCCCCCCCCCHHHH-HHH-HHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            9999999987654332 222 22334556777899999999999999999999996 6655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.4e-25  Score=170.19  Aligned_cols=132  Identities=31%  Similarity=0.615  Sum_probs=104.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||+++......   ......++..|+|||.+..        ..++.++|+||||+++
T Consensus       141 ~H~di~p~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  211 (277)
T cd05032         141 VHRDLAARNCMVAED-LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD--------GVFTTKSDVWSFGVVL  211 (277)
T ss_pred             cccccChheEEEcCC-CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc--------CCCCcccchHHHHHHH
Confidence            699999999999977 679999999987543222   1223456788999998743        5578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||+++ |..||.+...... ............|..++.++.+++.+||..+|.+|||+.++++.|+
T Consensus       212 ~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         212 WEMATLAEQPYQGLSNEEV-LKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHhhccCCCCCccCCHHHH-HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            99998 8899977554333 2333344455677788999999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.93  E-value=1.7e-25  Score=170.22  Aligned_cols=132  Identities=27%  Similarity=0.528  Sum_probs=102.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||++........   .....+++.|++||.+.+        ..++.++|+|||||++
T Consensus       144 ~H~dlkp~nil~~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  214 (280)
T cd05092         144 VHRDLATRNCLVGQG-LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY--------RKFTTESDIWSFGVVL  214 (280)
T ss_pred             ecccccHhhEEEcCC-CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc--------CCcCchhhHHHHHHHH
Confidence            699999999999966 6799999999874332211   122345678999998753        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||+++ |..||........ ............+..+++.+.+++.+||..||.+||++.++++.|+
T Consensus       215 ~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         215 WEIFTYGKQPWYQLSNTEA-IECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHcCCCCCCccCCHHHH-HHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            99998 8999976554332 2333344445566778999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.93  E-value=5.2e-26  Score=173.57  Aligned_cols=139  Identities=25%  Similarity=0.518  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||+++............|+..|++||.+.+.     ....++.++|+||+|+++|++
T Consensus       130 ~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~~~Di~slG~il~el  203 (288)
T cd06616         130 IHRDVKPSNILLDRN-GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS-----ARDGYDVRSDVWSLGITLYEV  203 (288)
T ss_pred             eccCCCHHHEEEccC-CcEEEeecchhHHhccCCccccccCccCccCHHHhccc-----cccCCcchhhhhHHHHHHHHH
Confidence            699999999999976 67999999998754333323344688899999998531     013578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCC----CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||..................+.+    +..++.++.+|+.+||..||++||++.+++.  +.|+..
T Consensus       204 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~--~~~~~~  272 (288)
T cd06616         204 ATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE--HPFIKD  272 (288)
T ss_pred             HhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc--Chhhhc
Confidence            9999999765432222222222222222    2347889999999999999999999999998  666543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.93  E-value=2.5e-25  Score=170.10  Aligned_cols=136  Identities=26%  Similarity=0.566  Sum_probs=106.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....++..|++||.+.+        ..++.++|+||||+++
T Consensus       149 vH~dikp~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~--------~~~~~~~Di~slG~~l  219 (290)
T cd05045         149 VHRDLAARNVLVAEG-RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD--------HIYTTQSDVWSFGVLL  219 (290)
T ss_pred             ehhhhhhheEEEcCC-CcEEeccccccccccCccchhcccCCCCCccccCHHHHcc--------CCcchHhHHHHHHHHH
Confidence            699999999999966 6799999999874322111   112345678999998743        5578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++++ |..||.+.... ..............+..++.++.+++.+||+.+|.+||++.++++.|+..+.
T Consensus       220 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         220 WEIVTLGGNPYPGIAPE-RLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHhcCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            99998 99999775533 2233333344555677789999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.93  E-value=2.9e-25  Score=173.70  Aligned_cols=137  Identities=28%  Similarity=0.564  Sum_probs=106.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||++........   .....++..|++||.+.+        ..++.++|+||||+++
T Consensus       201 ~H~dikp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l  271 (343)
T cd05103         201 IHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--------RVYTIQSDVWSFGVLL  271 (343)
T ss_pred             ecCCCccCeEEEcCC-CcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC--------CCCCchhhHHHHHHHH
Confidence            699999999999966 6799999999875422111   112335667999998743        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++++ |..||.+...................|...++++.+++.+||..||.+||++.+++++|+.++.
T Consensus       272 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         272 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             HHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            99996 8999976554333333333444555667788999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.93  E-value=2.5e-25  Score=171.17  Aligned_cols=135  Identities=32%  Similarity=0.568  Sum_probs=104.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+|||++.+ ..+||+|||+++.......   .....++..|++||.+..        ..++.++|+||+|+++
T Consensus       163 vH~dlkp~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DiwslGvil  233 (302)
T cd05055         163 IHRDLAARNVLLTHG-KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN--------CVYTFESDVWSYGILL  233 (302)
T ss_pred             ehhhhccceEEEcCC-CeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc--------CCCCcHhHHHHHHHHH
Confidence            699999999999866 6799999999875432211   122345678999998753        5578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |++++ |..||.....................+...++++.+++.+||..+|++||++.++++.|...
T Consensus       234 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         234 WEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            99998 99999876543333333333344455667889999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.93  E-value=3.5e-25  Score=176.25  Aligned_cols=136  Identities=32%  Similarity=0.576  Sum_probs=107.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++......   ......++..|++||.+..        ..++.++|+||||+++
T Consensus       261 vHrdlkp~NiLl~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGvil  331 (401)
T cd05107         261 VHRDLAARNVLICEG-KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN--------NLYTTLSDVWSFGILL  331 (401)
T ss_pred             CcccCCcceEEEeCC-CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC--------CCCCcHhHHHHHHHHH
Confidence            699999999999965 679999999997432211   1123456788999998753        5578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ||+++ |..||.................++..|..++.++.+++.+||..+|.+||+++++++.|+..+
T Consensus       332 ~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         332 WEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            99998 888987655444333434445556667788999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.93  E-value=4.2e-25  Score=170.25  Aligned_cols=138  Identities=30%  Similarity=0.617  Sum_probs=107.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||+++........   ....++..|+|||.+.+        ..++.++|+||+|+++
T Consensus       162 ~H~dlkp~Nill~~~-~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~~l  232 (307)
T cd05098         162 IHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD--------RIYTHQSDVWSFGVLL  232 (307)
T ss_pred             ccccccHHheEEcCC-CcEEECCCcccccccccchhhccccCCCccceeChHHhcc--------CCCCcHHHHHHHHHHH
Confidence            699999999999977 67999999998754321111   11234568999998753        5578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |+|++ |..||.+... ...............+..++.++.+++.+||..+|.+||++.++++.|+.++...
T Consensus       233 ~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~  303 (307)
T cd05098         233 WEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT  303 (307)
T ss_pred             HHHHcCCCCCCCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence            99998 8888876443 3333333344455667778999999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.93  E-value=2.8e-25  Score=167.12  Aligned_cols=134  Identities=22%  Similarity=0.540  Sum_probs=104.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+ +.+||+|||++........    .....++..|++||.+..        ..++.++|+||||++
T Consensus       117 ~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~  187 (257)
T cd05115         117 VHRDLAARNVLLVNQ-HYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINF--------RKFSSRSDVWSYGIT  187 (257)
T ss_pred             eecccchheEEEcCC-CcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHcc--------CCCCchhhHHHHHHH
Confidence            699999999999966 6799999999874322211    111223568999998743        457889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +|++++ |..||.+...... .........+..+...++++.+++.+||..+|.+||++.++.+.|+.+
T Consensus       188 l~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         188 MWEAFSYGQKPYKKMKGPEV-MSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHhcCCCCCcCcCCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            999996 9999987664332 333344455667778899999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=3e-26  Score=177.97  Aligned_cols=125  Identities=23%  Similarity=0.374  Sum_probs=98.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..++.++||||+||++|+
T Consensus       118 iHrDlkp~Nili~~~-~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  188 (325)
T cd05602         118 VYRDLKPENILLDSQ-GHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHK--------QPYDRTVDWWCLGAVLYE  188 (325)
T ss_pred             EecCCCHHHeEECCC-CCEEEccCCCCcccccCCCCcccccCCccccCHHHHcC--------CCCCCccccccccHHHHH
Confidence            699999999999976 6799999999874322 222344679999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ  136 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~  136 (198)
                      |++|..||.+....... ... .......+..++..+.+++.+||+.||.+|+++.+
T Consensus       189 l~~g~~pf~~~~~~~~~-~~i-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         189 MLYGLPPFYSRNTAEMY-DNI-LNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             HhcCCCCCCCCCHHHHH-HHH-HhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            99999999876543322 222 22344556678999999999999999999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=1.3e-25  Score=170.96  Aligned_cols=136  Identities=24%  Similarity=0.404  Sum_probs=102.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++...... .......|+..|+|||++.+        ..++.++|+||+|+++|+
T Consensus       119 ~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DvwslG~il~e  189 (280)
T cd05608         119 IYRDLKPENVLLDND-GNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQG--------EEYDFSVDYFALGVTLYE  189 (280)
T ss_pred             ccCCCCHHHEEECCC-CCEEEeeCccceecCCCCccccccCCCcCccCHHHhcC--------CCCCccccHHHHHHHHHH
Confidence            699999999999966 67999999998743322 22234578999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHH--HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQA--AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~~  147 (198)
                      +++|+.||........  .............+..+++++.+++.+||..||.+||     +++++++  +.|+..
T Consensus       190 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~--h~~~~~  262 (280)
T cd05608         190 MIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT--HPLFRD  262 (280)
T ss_pred             HHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc--Chhhhc
Confidence            9999999976432211  1111122233455677899999999999999999999     6788887  555543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.93  E-value=2.6e-26  Score=169.06  Aligned_cols=138  Identities=22%  Similarity=0.401  Sum_probs=109.0

Q ss_pred             CCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            2 GKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         2 H~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||+|+|....  +-.+||+|||+++....+....+.|.|++|.|||++-        ...|+...|+||+|+++|-
T Consensus       184 HRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg--------~eKydkscdmwSlgVimYI  255 (400)
T KOG0604|consen  184 HRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLG--------PEKYDKSCDMWSLGVIMYI  255 (400)
T ss_pred             hccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhC--------chhcCCCCCccchhHHHHH
Confidence            99999999999643  2358999999999766666677889999999999984        3568999999999999999


Q ss_pred             HHcCCCCCCCCCcHHH--HHHHHHccCCCCCC----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQA--AYAAAFKHARPGLP----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +++|.+||+.......  -....+......+|    ..++++..++|+++|..+|.+|.|+.+++.  +.|+.+..
T Consensus       256 lLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~--hpwi~~~~  329 (400)
T KOG0604|consen  256 LLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD--HPWINQYE  329 (400)
T ss_pred             hhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc--Cchhcccc
Confidence            9999999986654221  12222222333333    347899999999999999999999999999  88876544

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=4.6e-26  Score=177.14  Aligned_cols=130  Identities=25%  Similarity=0.444  Sum_probs=100.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vHrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil~e  188 (327)
T cd05617         118 IYRDLKLDNVLLDAD-GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG--------EEYGFSVDWWALGVLMFE  188 (327)
T ss_pred             eccCCCHHHEEEeCC-CCEEEeccccceeccCCCCceecccCCcccCCHHHHCC--------CCCCchheeehhHHHHHH
Confidence            699999999999976 679999999987432 2222345679999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCC-----cHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 029154           80 LLTNRLPFEGMS-----NLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF------SQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~------~~~l~  139 (198)
                      |++|..||....     .............+...|..++..+.+++.+||..||.+|+++      .++++
T Consensus       189 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  259 (327)
T cd05617         189 MMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKS  259 (327)
T ss_pred             HHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHc
Confidence            999999995321     1112222233344556788899999999999999999999984      56766

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=1.8e-25  Score=161.44  Aligned_cols=179  Identities=23%  Similarity=0.286  Sum_probs=127.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-----ccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +|||+|++|+||+.+ +.+||+|||+++.....     ..++..+-|..|.+||.+.+       ...|+++.|+|.-||
T Consensus       146 lHRDmKaaNvLIt~d-gilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG-------~r~yg~~iDiWgAgC  217 (376)
T KOG0669|consen  146 LHRDMKAANVLITKD-GILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLG-------DREYGPPIDIWGAGC  217 (376)
T ss_pred             HhhcccHhhEEEcCC-ceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhc-------ccccCCcchhHhHHH
Confidence            699999999999987 78999999999743221     22445567999999999986       678999999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHH--HHccCCCC------------------CC-------------CCCcHHHHHHHHH
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAA--AFKHARPG------------------LP-------------EDISPDLAFIVQS  122 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~--~~~~~~~~------------------~p-------------~~~~~~~~~l~~~  122 (198)
                      ++.||+++.+.+++..+.+....+  +.....++                  +|             ..-+++..+|+.+
T Consensus       218 imaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~  297 (376)
T KOG0669|consen  218 IMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEK  297 (376)
T ss_pred             HHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHH
Confidence            999999999999988776654222  22222211                  11             1125678899999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhccCCCccchhhHhhhhhHHHHHHHHHHhhh
Q 029154          123 CWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARARGKFAFLRQLFTAKRT  194 (198)
Q Consensus       123 ~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (198)
                      ++.+||.+|+++++++.  +++++....|.     +.......+...++.++.+.++...+.-...-...++
T Consensus       298 ll~~DP~kR~~ad~aln--h~~F~kdp~pq-----anl~~ml~t~~~s~fey~~~~~~~~~~~~~q~~~q~~  362 (376)
T KOG0669|consen  298 LLKLDPTKRIDADQALN--HDFFWKDPMPQ-----ANLQDMLSTHLQSMFEYLAQPRRSNQMRNYQQQLQTM  362 (376)
T ss_pred             HhccCcccCcchHhhhc--hhhhhcCCcch-----hhHHHHHHHhHHHHHHHhcCcchhhhhhhHHHHhcCC
Confidence            99999999999999999  77777655442     2223334445556667666666555544444333333

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.93  E-value=3.6e-25  Score=166.21  Aligned_cols=133  Identities=30%  Similarity=0.590  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.+||+|||+++......    ......++..|++||.+..        ..++.++|+||||++
T Consensus       119 ~H~di~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--------~~~~~~~Di~slG~~  189 (257)
T cd05040         119 IHRDLAARNILLASD-DKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT--------RTFSHASDVWMFGVT  189 (257)
T ss_pred             cccccCcccEEEecC-CEEEeccccccccccccccceecccCCCCCceecCHHHhcc--------cCcCchhhhHHHHHH
Confidence            699999999999977 689999999987543211    1112356788999998753        567889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +|+|++ |..||.....................+...+..+.+++.+||..+|++||++.++++.|.
T Consensus       190 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         190 LWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            999998 999997665543322222233344456678899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.9e-26  Score=179.56  Aligned_cols=129  Identities=26%  Similarity=0.425  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc------------------------------cccCCCCccceecccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE------------------------------MMTAETGTYRWMAPEL   50 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~------------------------------~~~~~~gt~~y~aPE~   50 (198)
                      |||||||+|||++.+ +.+||+|||++.......                              ......||+.|+|||+
T Consensus       123 iH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  201 (350)
T cd05573         123 IHRDIKPDNILIDAD-GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEV  201 (350)
T ss_pred             eccCCCHHHeEECCC-CCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHH
Confidence            699999999999977 679999999987543222                              1234578999999999


Q ss_pred             cccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC--CCcHHHHHHHHHhcccCC
Q 029154           51 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~l~~~~l~~dp  128 (198)
                      +.+        ..++.++|||||||++|||++|..||.+...................|.  .+++++.+++.+||. ||
T Consensus       202 ~~~--------~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp  272 (350)
T cd05573         202 LRG--------TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DP  272 (350)
T ss_pred             HcC--------CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Ch
Confidence            854        5678999999999999999999999987664333222222112222333  369999999999997 99


Q ss_pred             CCCCC-HHHHHH
Q 029154          129 NLRPS-FSQIIR  139 (198)
Q Consensus       129 ~~Rps-~~~~l~  139 (198)
                      .+|++ ++++++
T Consensus       273 ~~R~~s~~~ll~  284 (350)
T cd05573         273 EDRLGSFEEIKS  284 (350)
T ss_pred             hhcCCCHHHHhc
Confidence            99999 999998

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=3.7e-25  Score=166.28  Aligned_cols=134  Identities=27%  Similarity=0.495  Sum_probs=104.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-cc---CCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MT---AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+|||++.+ +.+||+|||+++....... ..   ...++..|++||.+.+        ..++.++|+||||++
T Consensus       117 ~H~di~p~nili~~~-~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~  187 (257)
T cd05060         117 VHRDLAARNVLLVNR-HQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY--------GKFSSKSDVWSYGVT  187 (257)
T ss_pred             eccCcccceEEEcCC-CcEEeccccccceeecCCcccccccCccccccccCHHHhcC--------CCCCccchHHHHHHH
Confidence            699999999999976 6799999999875432221 11   1123467999998753        557889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +|++++ |..||....... .............+..++..+.+++.+||..+|.+||++.++++.|+..
T Consensus       188 l~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         188 LWEAFSYGAKPYGEMKGAE-VIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHcCCCCCcccCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            999997 999997765433 2333334444566777899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=2.6e-25  Score=184.84  Aligned_cols=137  Identities=33%  Similarity=0.646  Sum_probs=114.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccC--CCC--ccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTA--ETG--TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~--~~g--t~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||-..|||+..+ ..+||+|||+++.......+..  ..|  ...|||||.+.        ...|+.++||||||++
T Consensus       440 vHRDLAaRNVLi~~~-~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~--------~~~ft~kSDVWSfGI~  510 (609)
T KOG0200|consen  440 VHRDLAARNVLITKN-KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF--------DRVFTSKSDVWSFGIL  510 (609)
T ss_pred             cchhhhhhhEEecCC-CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc--------cCcccccchhhHHHHH
Confidence            799999999999977 6899999999996554443321  222  34699999985        3789999999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +||+++ |..||.+.............+.+...|..+++++.++|+.||..+|.+||++.++.+.+...+.
T Consensus       511 L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  511 LWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             HHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            999997 8899998664455566677788889999999999999999999999999999999999988543

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=6.2e-25  Score=165.64  Aligned_cols=135  Identities=30%  Similarity=0.519  Sum_probs=104.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||+++.......  .....++..|++||....        ..++.++|+||+|+++|
T Consensus       124 ~H~dl~p~Nill~~~-~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~DvwslG~~l~  194 (262)
T cd05071         124 VHRDLRAANILVGEN-LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTIKSDVWSFGILLT  194 (262)
T ss_pred             cccccCcccEEEcCC-CcEEeccCCceeeccccccccccCCcccceecCHhHhcc--------CCCCchhhHHHHHHHHH
Confidence            699999999999976 6799999999875432221  112345678999998743        56789999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++++ |..||.+...... ............+..++..+.+++.+||..||.+||+++++++.|++++
T Consensus       195 ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         195 ELTTKGRVPYPGMVNREV-LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             HHHcCCCCCCCCCChHHH-HHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            9999 8888877654332 2222333334445668899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=2.6e-25  Score=173.35  Aligned_cols=136  Identities=25%  Similarity=0.453  Sum_probs=100.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||++...... ......|+..|+|||++.+        ..++.++|+|||||++|++
T Consensus       126 vH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~il~~l  195 (333)
T cd06650         126 MHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG--------THYSVQSDIWSMGLSLVEM  195 (333)
T ss_pred             EecCCChhhEEEcCC-CCEEEeeCCcchhhhhh-ccccCCCCccccCHHHhcC--------CCCCcHHHHHHHHHHHHHH
Confidence            699999999999976 67999999998744321 2234578999999999853        5578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHH-------------------------------------------HHHHccCCCCCC-CCCcHHH
Q 029154           81 LTNRLPFEGMSNLQAAY-------------------------------------------AAAFKHARPGLP-EDISPDL  116 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~p-~~~~~~~  116 (198)
                      ++|+.||..........                                           ........+..+ ..++.++
T Consensus       196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (333)
T cd06650         196 AIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEF  275 (333)
T ss_pred             HHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHH
Confidence            99999986533211100                                           001111112222 1357889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154          117 AFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       117 ~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      .+|+.+||..||++||++.++++  +.|+...
T Consensus       276 ~~li~~~L~~~P~~Rpt~~ell~--h~~~~~~  305 (333)
T cd06650         276 QDFVNKCLIKNPAERADLKQLMV--HAFIKRS  305 (333)
T ss_pred             HHHHHHhccCCcccCcCHHHHhh--CHHHhcC
Confidence            99999999999999999999998  7777543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=1e-25  Score=171.32  Aligned_cols=130  Identities=23%  Similarity=0.336  Sum_probs=97.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.++|+|||++.............|+..|+|||++.+        ..++.++|+||+||++|++
T Consensus       117 vH~dikp~Nili~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGv~l~el  187 (277)
T cd05607         117 VYRDMKPENVLLDDQ-GNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE--------EPYSYPVDWFAMGCSIYEM  187 (277)
T ss_pred             EEccCChHhEEEcCC-CCEEEeeceeeeecCCCceeeccCCCCCccCHHHHcc--------CCCCCchhHHHHHHHHHHH
Confidence            699999999999976 6799999999875443333334578999999999853        4588999999999999999


Q ss_pred             HcCCCCCCCCCcHHH---HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|..||........   ................+++++.+++.+||+.||.+||++.|+++
T Consensus       188 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         188 VAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             HhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            999999976433211   11111111111122457899999999999999999999966553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=5.3e-26  Score=176.50  Aligned_cols=124  Identities=25%  Similarity=0.403  Sum_probs=98.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..++.++|+|||||++|+
T Consensus       118 vH~dikp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~e  188 (323)
T cd05575         118 IYRDLKPENILLDSQ-GHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRK--------QPYDRTVDWWCLGAVLYE  188 (323)
T ss_pred             EeCCCCHHHeEECCC-CcEEEeccCCCcccccCCCccccccCChhhcChhhhcC--------CCCCccccccccchhhhh
Confidence            699999999999976 6799999999874322 222334579999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      |++|..||.+...... .... .......+..++..+.+++.+||..||.+||++.
T Consensus       189 ll~g~~pf~~~~~~~~-~~~i-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         189 MLYGLPPFYSRDTAEM-YDNI-LNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             hhcCCCCCCCCCHHHH-HHHH-HcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            9999999987654322 2222 2334455667899999999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.93  E-value=4.1e-25  Score=166.96  Aligned_cols=134  Identities=28%  Similarity=0.503  Sum_probs=104.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc--CCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT--AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+|++|||.+..........  ...++..|+|||.+.+        ..++.++|+|||||++|
T Consensus       129 iH~dikp~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  199 (266)
T cd05064         129 VHKGLAAHKVLVNSD-LVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY--------HHFSSASDVWSFGIVMW  199 (266)
T ss_pred             eeccccHhhEEEcCC-CcEEECCCcccccccccchhcccCCCCceeecCHHHHhh--------CCccchhHHHHHHHHHH
Confidence            699999999999976 679999999876432221111  2234678999998753        56789999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |+++ |..||.+...... ..........+.|..++..+.+++.+||..+|.+||++.++++.|+..
T Consensus       200 ell~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         200 EVMSYGERPYWDMSGQDV-IKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHhcCCCCCcCcCCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            9775 9999987664332 223334445566778899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=6.8e-26  Score=172.95  Aligned_cols=130  Identities=22%  Similarity=0.381  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+||+++.+ +.++|+|||++............+|+..|++||++.+        ..++.++|+||+|+++|++
T Consensus       124 vH~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Diws~G~~l~el  194 (285)
T cd05605         124 VYRDLKPENILLDDY-GHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKN--------ERYTFSPDWWGLGCLIYEM  194 (285)
T ss_pred             EecCCCHHHEEECCC-CCEEEeeCCCceecCCCCccccccCCCCccCcHHhcC--------CCCCccccchhHHHHHHHH
Confidence            699999999999966 6799999999876543333345578999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHH--HHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      ++|..||.+.......  ............+..+++.+.+++.+||..||.+||     +++++++
T Consensus       195 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         195 IEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            9999999875432211  112222334455667899999999999999999999     8888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.93  E-value=7.1e-25  Score=169.49  Aligned_cols=138  Identities=30%  Similarity=0.610  Sum_probs=107.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....++..|++||.+..        ..++.++|+||||+++
T Consensus       156 ~H~dlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DiwslG~~l  226 (314)
T cd05099         156 IHRDLAARNVLVTED-NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD--------RVYTHQSDVWSFGILM  226 (314)
T ss_pred             eeccccceeEEEcCC-CcEEEccccccccccccccccccccCCCCccccCHHHHcc--------CCcCccchhhHHHHHH
Confidence            699999999999976 6799999999975432211   111234467999998743        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++++ |..||.+.... ..............+..++.++.+++.+||..+|.+||++.++++.|..+....
T Consensus       227 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         227 WEIFTLGGSPYPGIPVE-ELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence            99998 88899765532 333333344445567778899999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.93  E-value=4.4e-25  Score=165.62  Aligned_cols=131  Identities=34%  Similarity=0.587  Sum_probs=105.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||.+......   .......++..|+|||.+..        ..++.++|+||+|+++
T Consensus       127 ~H~di~p~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  197 (262)
T cd00192         127 VHRDLAARNCLVGED-LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKD--------GIFTSKSDVWSFGVLL  197 (262)
T ss_pred             ccCccCcceEEECCC-CcEEEcccccccccccccccccccCCCcCccccCHHHhcc--------CCcchhhccHHHHHHH
Confidence            699999999999977 67999999999754432   11233457889999998753        4678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |++++ |..||...... ..............+..++.++.+++.+||..+|.+||++.+++++|
T Consensus       198 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         198 WEIFTLGATPYPGLSNE-EVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            99998 68999876543 33333444555667788899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.93  E-value=5.3e-25  Score=167.40  Aligned_cols=136  Identities=29%  Similarity=0.531  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||+++.......   .....++..|+|||++..        ..++.++|+||||+++
T Consensus       139 ~H~di~p~nil~~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~--------~~~~~~~Di~slG~~l  209 (280)
T cd05043         139 IHKDIAARNCVIDEE-LQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN--------KEYSSASDVWSFGVLL  209 (280)
T ss_pred             eecccCHhhEEEcCC-CcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc--------CCCCchhhHHHhHHHH
Confidence            699999999999866 6899999999975432211   122345678999998753        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||....... ..........+..+..+++++.+++.+||..||++||++.++++.|+++..
T Consensus       210 ~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         210 WELMTLGQTPYVEIDPFE-MAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             HHHhcCCCCCcCcCCHHH-HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            99998 999998765433 223333344445556678999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=4.8e-25  Score=167.94  Aligned_cols=135  Identities=24%  Similarity=0.449  Sum_probs=100.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+ +.+||+|||+++.......    .....++..|++||.+..        ..++.++|+||||++
T Consensus       129 ~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------~~~~~~~Di~slG~~  199 (283)
T cd05080         129 IHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE--------NKFSYASDVWSFGVT  199 (283)
T ss_pred             eccccChheEEEcCC-CcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcc--------cCCCcccccHHHHHH
Confidence            699999999999976 6799999999875432211    112345667999998743        557889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHH--------------HHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQ--------------AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +|++++|..|+.......              ............+.+..++..+.+++.+||..+|++||+++++++.|+
T Consensus       200 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~  279 (283)
T cd05080         200 LYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK  279 (283)
T ss_pred             HHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence            999999998875432110              000011112223345668899999999999999999999999999988


Q ss_pred             HH
Q 029154          143 AF  144 (198)
Q Consensus       143 ~~  144 (198)
                      .+
T Consensus       280 ~~  281 (283)
T cd05080         280 EM  281 (283)
T ss_pred             Hh
Confidence            75

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.4e-25  Score=165.72  Aligned_cols=133  Identities=32%  Similarity=0.520  Sum_probs=102.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc--CCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT--AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||++..........  ....+..|++||.+.+        ..++.++|+||||+++|
T Consensus       125 ~H~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  195 (261)
T cd05068         125 IHRDLAARNVLVGEN-NICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALY--------NRFSIKSDVWSFGILLT  195 (261)
T ss_pred             eeccCCcceEEEcCC-CCEEECCcceEEEccCCcccccCCCcCceeccCcccccc--------CCCCchhhHHHHHHHHH
Confidence            699999999999976 679999999987544221111  1122457999998753        56788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++++ |+.||.+...... ............+...+..+.+++.+||..+|.+||++.++++.|++
T Consensus       196 el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         196 EIVTYGRMPYPGMTNAEV-LQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            9998 9999987654332 23333334445566788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.93  E-value=5.5e-25  Score=165.61  Aligned_cols=133  Identities=32%  Similarity=0.538  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.++|+|||++........  .....++..|+|||.+..        ..++.++|+||||+++|
T Consensus       124 ~H~di~p~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  194 (260)
T cd05070         124 IHRDLRSANILVGDG-LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTIKSDVWSFGILLT  194 (260)
T ss_pred             ccCCCccceEEEeCC-ceEEeCCceeeeeccCcccccccCCCCCccccChHHHhc--------CCCcchhhhHHHHHHHH
Confidence            699999999999966 6799999999975433221  112235567999998743        56788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++++ |..||.+...... ..........+.+...+..+.+++.+||..+|++|||+.++.+.|+.
T Consensus       195 ~l~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         195 ELVTKGRVPYPGMNNREV-LEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9998 8899987654332 23333344556677789999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.93  E-value=5e-25  Score=167.39  Aligned_cols=133  Identities=28%  Similarity=0.553  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +||||||+||+++.++  ..+||+|||+++.......   ......+..|++||++.+        ..++.++|||||||
T Consensus       138 vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DiwslG~  209 (277)
T cd05036         138 IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD--------GIFTSKTDVWSFGV  209 (277)
T ss_pred             eecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhc--------CCcCchhHHHHHHH
Confidence            6999999999998542  3589999999975432211   112233567999999853        56889999999999


Q ss_pred             HHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           76 VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        76 ~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ++||+++ |..||.+...... ............|..++..+.+++.+||..+|++||++.+++++|+
T Consensus       210 il~el~~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         210 LLWEIFSLGYMPYPGRTNQEV-MEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHcCCCCCCCCCCHHHH-HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            9999996 9999987654332 2333334445567778999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.93  E-value=2e-25  Score=168.95  Aligned_cols=135  Identities=27%  Similarity=0.413  Sum_probs=101.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++...... .......|+..|++||++.+...   ....++.++|+||+||++||
T Consensus       133 vh~dl~~~nili~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~---~~~~~~~~~Dv~slGv~l~e  208 (272)
T cd06637         133 IHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN---PDATYDFKSDLWSLGITAIE  208 (272)
T ss_pred             ccCCCCHHHEEECCC-CCEEEccCCCceecccccccCCcccccccccCHhHhccccC---cCCCCCchhhHHHHHHHHHH
Confidence            699999999999976 67999999998754322 12234578899999998753110   12457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||.................+...+..++.++.+|+.+||..||.+||++.++++
T Consensus       209 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         209 MAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            999999997655444333322222222334457889999999999999999999999987

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.93  E-value=1.9e-25  Score=171.41  Aligned_cols=137  Identities=31%  Similarity=0.480  Sum_probs=104.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......|+..|++||.+.+        ..++.++|+|||||++|+
T Consensus       138 ~H~dLkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~s~Gvil~~  208 (296)
T cd06654         138 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--------KAYGPKVDIWSLGIMAIE  208 (296)
T ss_pred             ccCCCCHHHEEEcCC-CCEEECccccchhccccccccCcccCCccccCHHHHcC--------CCCCccchHHHHHHHHHH
Confidence            699999999999876 679999999987433221 1233568899999998753        456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +++|..||................ .....+..++..+.+++.+||..||.+||++.++++  +.|+...
T Consensus       209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~--~~~~~~~  276 (296)
T cd06654         209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ--HQFLKIA  276 (296)
T ss_pred             HHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh--Chhhhcc
Confidence            999999998766533332222111 122345668889999999999999999999999998  6665543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.92  E-value=1.1e-25  Score=177.39  Aligned_cols=133  Identities=25%  Similarity=0.384  Sum_probs=96.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc------------------------------------cccCCCCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE------------------------------------MMTAETGTYR   44 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~------------------------------------~~~~~~gt~~   44 (198)
                      |||||||+|||++.+ +.+||+|||+++......                                    .....+||+.
T Consensus       123 vHrDlKp~NILi~~~-~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~  201 (363)
T cd05628         123 IHRDIKPDNLLLDSK-GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPD  201 (363)
T ss_pred             EecCCCHHHeEECCC-CCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcc
Confidence            699999999999976 689999999986432100                                    0123579999


Q ss_pred             eecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC--CCcHHHHHHHHH
Q 029154           45 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQS  122 (198)
Q Consensus        45 y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~l~~~  122 (198)
                      |+|||++.+        ..++.++|+|||||++|||++|..||.+..................+|.  .+++++.+++.+
T Consensus       202 Y~aPE~~~~--------~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  273 (363)
T cd05628         202 YIAPEVFMQ--------TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILR  273 (363)
T ss_pred             ccCHHHHcC--------CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHH
Confidence            999999853        5678999999999999999999999987664433222222122233343  368899999998


Q ss_pred             hcccCCC---CCCCHHHHHHHHHHHH
Q 029154          123 CWVEDPN---LRPSFSQIIRMLNAFL  145 (198)
Q Consensus       123 ~l~~dp~---~Rps~~~~l~~l~~~~  145 (198)
                      ++. +|.   .||+++++++  +.|+
T Consensus       274 l~~-~~~~r~~r~~~~ei~~--hp~f  296 (363)
T cd05628         274 FCC-EWEHRIGAPGVEEIKT--NPFF  296 (363)
T ss_pred             HcC-ChhhcCCCCCHHHHhC--CCCC
Confidence            664 444   4589999998  5554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=1.1e-25  Score=172.13  Aligned_cols=135  Identities=21%  Similarity=0.368  Sum_probs=109.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|||||-+|||||.+ +++||+|||++-...+.....++||++-|.+||++++       ..+-++.+|.||+|+++|.+
T Consensus       175 vHRDLKLENILLD~N-~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG-------~PY~GPEVDsWsLGvLLYtL  246 (668)
T KOG0611|consen  175 VHRDLKLENILLDQN-NNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNG-------TPYKGPEVDSWSLGVLLYTL  246 (668)
T ss_pred             eecccchhheeecCC-CCeeeeccchhhhhccccHHHHhcCCcccCCccccCC-------CCCCCCccchhhHHHHHHHH
Confidence            699999999999977 6799999999998888888899999999999999975       22336789999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +.|..||.|.+......++.  .....-|+ .+.++..||++||..+|..|.|+.++..  |.|+...
T Consensus       247 VyGtMPFDG~Dhk~lvrQIs--~GaYrEP~-~PSdA~gLIRwmLmVNP~RRATieDiAs--HWWvNwg  309 (668)
T KOG0611|consen  247 VYGTMPFDGRDHKRLVRQIS--RGAYREPE-TPSDASGLIRWMLMVNPERRATIEDIAS--HWWVNWG  309 (668)
T ss_pred             hhcccccCCchHHHHHHHhh--cccccCCC-CCchHHHHHHHHHhcCcccchhHHHHhh--hheeecc
Confidence            99999999877544333322  22222222 4557889999999999999999999998  7776543

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=8.7e-25  Score=167.75  Aligned_cols=139  Identities=32%  Similarity=0.512  Sum_probs=107.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......++..|++||.+.+        ..++.++|+||||+++|+
T Consensus       137 ~H~dL~p~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slGvil~~  207 (296)
T cd06655         137 IHRDIKSDNVLLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--------KAYGPKVDIWSLGIMAIE  207 (296)
T ss_pred             ccCCCCHHHEEECCC-CCEEEccCccchhcccccccCCCcCCCccccCcchhcC--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 679999999987433222 1223468889999998753        557889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      +++|..||.+.............. .....+..+++.+.+++.+||..||.+||++.++++  +.|+....+
T Consensus       208 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~--~~~~~~~~~  277 (296)
T cd06655         208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ--HPFLKLAKP  277 (296)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh--ChHhhhccc
Confidence            999999998766544332222111 122345678899999999999999999999999998  888775543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.92  E-value=7.1e-25  Score=165.05  Aligned_cols=133  Identities=32%  Similarity=0.540  Sum_probs=104.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.++|+|||++........  .....++..|++||...+        ..++.++|+||||+++|
T Consensus       124 ~H~dl~~~Nill~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--------~~~~~~~Di~slG~~l~  194 (260)
T cd05069         124 IHRDLRAANILVGDN-LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTIKSDVWSFGILLT  194 (260)
T ss_pred             eecccCcceEEEcCC-CeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc--------CCcChHHHHHHHHHHHH
Confidence            699999999999966 6799999999975432221  112345678999998743        56788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++++ |..||.+...... .........+..+...+..+.+++.+||..||.+||+++++++.|+.
T Consensus       195 el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         195 ELVTKGRVPYPGMVNREV-LEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHhCCCCCCCCCCHHHH-HHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            9998 8999987654333 23333344455667789999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.92  E-value=1.3e-25  Score=177.34  Aligned_cols=138  Identities=23%  Similarity=0.355  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||++.......  .....+||+.|+|||++....    ....++.++|+||+||++|
T Consensus       164 vHrDLkp~NILl~~~-~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~~DiwSlGvily  238 (370)
T cd05596         164 IHRDVKPDNMLLDKS-GHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQG----GDGYYGRECDWWSVGVFLY  238 (370)
T ss_pred             eccCCCHHHEEEcCC-CCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCC----CCCCCCCceeeeehhHHHH
Confidence            699999999999976 689999999987543221  123467999999999875310    1234788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC--CCcHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQSCWVEDPNL--RPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~~l~~~~  145 (198)
                      ||++|..||.+...................|.  .++.++.+++.+||..+|.+  |+++.++++  +.|+
T Consensus       239 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~--h~~~  307 (370)
T cd05596         239 EMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS--HPFF  307 (370)
T ss_pred             HHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc--Cccc
Confidence            99999999987664333222222222233443  47899999999999999987  999999998  4554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.92  E-value=7.8e-25  Score=164.72  Aligned_cols=133  Identities=32%  Similarity=0.587  Sum_probs=104.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++........ .....++..|++||.+..        ..++.++|+||||+++|+
T Consensus       126 ~h~dl~~~nilv~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------~~~~~~~DiwslG~~l~~  196 (261)
T cd05148         126 IHRDLAARNILVGED-LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASH--------GTFSTKSDVWSFGILLYE  196 (261)
T ss_pred             eccccCcceEEEcCC-ceEEEccccchhhcCCccccccCCCCceEecCHHHHcc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 6799999999875432221 122345678999998743        567889999999999999


Q ss_pred             HHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           80 LLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        80 ~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      +++ |..||.+..... .............+..+++.+.+++.+||..||.+||++.++++.|+.
T Consensus       197 l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         197 MFTYGQVPYPGMNNHE-VYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHcCCCCCCCcCCHHH-HHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            998 899997765433 223333444556677889999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.92  E-value=7.7e-26  Score=175.42  Aligned_cols=124  Identities=27%  Similarity=0.394  Sum_probs=98.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..++.++|+|||||++||
T Consensus       118 vH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  188 (321)
T cd05603         118 IYRDLKPENILLDSQ-GHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRK--------EPYDRTVDWWCLGAVLYE  188 (321)
T ss_pred             EeccCCHHHeEECCC-CCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcC--------CCCCCcCcccccchhhhh
Confidence            699999999999976 6799999999875322 222334578999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      |++|..||.+..... .... .......+|...+.++.+++.+||..||.+|+++.
T Consensus       189 l~~g~~pf~~~~~~~-~~~~-i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         189 MLYGLPPFYSRDVSQ-MYDN-ILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             hhcCCCCCCCCCHHH-HHHH-HhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            999999998765332 2222 22344566777899999999999999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=9.8e-25  Score=163.81  Aligned_cols=131  Identities=31%  Similarity=0.614  Sum_probs=103.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||+++......  ....++..|++||.+..        ..++.++|+||||+++|++
T Consensus       124 ~H~di~p~Nili~~~-~~~~l~d~g~~~~~~~~~--~~~~~~~~~~ape~~~~--------~~~~~~~Di~slG~il~~l  192 (256)
T cd05039         124 VHRDLAARNVLVSED-LVAKVSDFGLAKEASQGQ--DSGKLPVKWTAPEALRE--------KKFSTKSDVWSFGILLWEI  192 (256)
T ss_pred             cchhcccceEEEeCC-CCEEEccccccccccccc--ccCCCcccccCchhhcC--------CcCCcHHHHHHHHHHHHHH
Confidence            699999999999966 679999999997653222  12344567999998753        4578899999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++ |..||..... ...............+..+++.+.+++.+||..+|++||++.+++++|+.
T Consensus       193 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         193 YSFGRVPYPRIPL-KDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HhcCCCCCCCCCH-HHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            97 9999976543 33333333344555667789999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.92  E-value=1.1e-24  Score=163.67  Aligned_cols=131  Identities=29%  Similarity=0.586  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc--cCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM--TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||+++........  ....++..|+|||.+.+        ..++.++|+||||+++|
T Consensus       122 ~H~dl~p~ni~i~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~s~G~~l~  192 (256)
T cd05114         122 IHRDLAARNCLVSST-GVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF--------SKYSSKSDVWSFGVLMW  192 (256)
T ss_pred             cccccCcceEEEcCC-CeEEECCCCCccccCCCceeccCCCCCchhhCChhhccc--------CccchhhhhHHHHHHHH
Confidence            699999999999966 67999999998754322211  12234568999999753        46788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ++++ |+.||........ ............|...+..+.+++.+||..+|.+||+++++++.|
T Consensus       193 el~~~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         193 EVFTEGKMPFEKKSNYEV-VEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHcCCCCCCCCCCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            9999 8999987664433 233333444555667888999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.92  E-value=1.4e-25  Score=171.17  Aligned_cols=135  Identities=21%  Similarity=0.394  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.++|+|||++.............|+..|+|||++.+        ..++.++|+||+|+++|+|
T Consensus       124 iH~dikp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwslG~~l~~l  194 (285)
T cd05630         124 VYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--------ERYTFSPDWWALGCLLYEM  194 (285)
T ss_pred             EeCCCCHHHEEECCC-CCEEEeeccceeecCCCccccCCCCCccccChHHHcC--------CCCCCccccHHHHHHHHHH
Confidence            699999999999976 6799999999875443333344578999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHH--HHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQ--AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|..||.......  ..............+..+++++.+++.+||+.||.+||+     +.++++  +.|+.
T Consensus       195 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~--h~~~~  265 (285)
T cd05630         195 IAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE--HPLFK  265 (285)
T ss_pred             HhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc--Chhhh
Confidence            99999998654211  111122222233456678899999999999999999999     889988  45543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.92  E-value=9.7e-25  Score=164.88  Aligned_cols=134  Identities=29%  Similarity=0.545  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccC--CCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTA--ETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~--~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.+||+|||++........  ...  ...+..|++||++..        ..++.++|+||||++
T Consensus       129 ~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Dv~slG~i  199 (268)
T cd05063         129 VHRDLAARNILVNSN-LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY--------RKFTSASDVWSFGIV  199 (268)
T ss_pred             eccccchhhEEEcCC-CcEEECCCccceecccccccceeccCCCcCceecCHHHhhc--------CCcChHhHHHHHHHH
Confidence            699999999999976 6799999999874432111  111  123457999998753        567889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +||+++ |..||....... ...........+.+..++..+.+++.+||..+|++||++.++++.|+++
T Consensus       200 l~ell~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         200 MWEVMSFGERPYWDMSNHE-VMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHhCCCCCCCcCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            999997 999997655433 2233333344455667889999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.7e-25  Score=174.87  Aligned_cols=135  Identities=25%  Similarity=0.400  Sum_probs=115.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |-|||||+|.+|+.+ +-+||.|||+++.........++|||+.|.|||++.        ++..+.++|.|++|+++||+
T Consensus       542 IYRDLKPENllLd~~-Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIIL--------nKGHD~avDyWaLGIli~EL  612 (732)
T KOG0614|consen  542 IYRDLKPENLLLDNR-GYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIIL--------NKGHDRAVDYWALGILIYEL  612 (732)
T ss_pred             eeccCChhheeeccC-CceEEeehhhHHHhccCCceeeecCCcccccchhhh--------ccCcchhhHHHHHHHHHHHH
Confidence            569999999999987 569999999999888888888999999999999985        36678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|.+||++.+++.....++..-....+|..++....+++++++..+|.+|..     +.++-+  |.|+.
T Consensus       613 L~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk--H~Wf~  681 (732)
T KOG0614|consen  613 LTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK--HRWFE  681 (732)
T ss_pred             HcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh--hhhhh
Confidence            99999999988877665555445556788889999999999999999999965     666766  55554

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.92  E-value=4.9e-25  Score=165.40  Aligned_cols=129  Identities=30%  Similarity=0.520  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++...... .......++..|+|||++..        ..++.++|+||+|+++++
T Consensus       124 ~H~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~~  194 (257)
T cd08223         124 LHRDLKTQNVFLTRT-NIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN--------KPYNYKSDVWALGCCVYE  194 (257)
T ss_pred             eccCCCchhEEEecC-CcEEEecccceEEecccCCccccccCCcCccChhHhcC--------CCCCchhhhHHHHHHHHH
Confidence            699999999999976 67999999998754322 22234568889999998753        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|+.||......... ........+..+..+++.+.+++.+||+.+|.+||++.++++
T Consensus       195 l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         195 MATLKHAFNAKDMNSLV-YRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHcCCCCCCCCCHHHHH-HHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            99999999765543322 223334444566778999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.92  E-value=1e-24  Score=163.12  Aligned_cols=132  Identities=31%  Similarity=0.573  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc--cCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM--TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||++.........  ....++..|++||++.+        ..++.++|+||||+++|
T Consensus       115 ~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~ll~  185 (250)
T cd05085         115 IHRDLAARNCLVGEN-NVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNY--------GRYSSESDVWSYGILLW  185 (250)
T ss_pred             eecccChheEEEcCC-CeEEECCCccceeccccccccCCCCCCcccccCHHHhcc--------CCCCchhHHHHHHHHHH
Confidence            699999999999966 67999999998753322211  11234567999998753        55788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ++++ |..||.+..... .............+..++.++.+++.+||..+|.+||++.++++.|.
T Consensus       186 ~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         186 ETFSLGVCPYPGMTNQQ-AREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHhcCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            9998 999998765433 22333344445566778999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.92  E-value=2.3e-25  Score=172.99  Aligned_cols=123  Identities=25%  Similarity=0.479  Sum_probs=97.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... ........||..|+|||++.+        ..++.++|+||+||++|+
T Consensus       123 vHrDikp~Nill~~~-~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil~e  193 (323)
T cd05615         123 IYRDLKLDNVMLDSE-GHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAY--------QPYGKSVDWWAYGVLLYE  193 (323)
T ss_pred             eccCCCHHHeEECCC-CCEEEeccccccccCCCCccccCccCCccccCHHHHcC--------CCCCCccchhhhHHHHHH
Confidence            699999999999976 6799999999874322 122334578999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF  134 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~  134 (198)
                      |++|..||.+.........  ........|..++.++.+++.+||..+|.+|++.
T Consensus       194 lltG~~pf~~~~~~~~~~~--i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         194 MLAGQPPFDGEDEDELFQS--IMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHhCCCCCCCCCHHHHHHH--HHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            9999999987664333222  2234445677889999999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=2.2e-25  Score=175.26  Aligned_cols=135  Identities=25%  Similarity=0.400  Sum_probs=94.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............||..|+|||++.+        ..++.++|+|||||++|||
T Consensus       179 vHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvvl~el  249 (357)
T PHA03209        179 IHRDVKTENIFINDV-DQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLAR--------DKYNSKADIWSAGIVLFEM  249 (357)
T ss_pred             ecCCCCHHHEEECCC-CCEEEecCccccccccCcccccccccccccCCeecCC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 6799999999975433333344678999999999853        5678999999999999999


Q ss_pred             HcCCCC-CCCCCcHH---------HHHHH--HHccCCCCCC------------------------------CCCcHHHHH
Q 029154           81 LTNRLP-FEGMSNLQ---------AAYAA--AFKHARPGLP------------------------------EDISPDLAF  118 (198)
Q Consensus        81 ~~g~~p-~~~~~~~~---------~~~~~--~~~~~~~~~p------------------------------~~~~~~~~~  118 (198)
                      +++..+ |.......         .....  .....+..++                              ..++.++.+
T Consensus       250 l~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (357)
T PHA03209        250 LAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEF  329 (357)
T ss_pred             HHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHH
Confidence            985544 33211110         00000  0000011111                              134567788


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          119 IVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       119 l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++.+||..||.+|||+.|+++  +.|+.
T Consensus       330 li~~mL~~dP~~Rpta~e~l~--hp~f~  355 (357)
T PHA03209        330 LVHKMLTFDAAMRPSAEEILN--YPMFA  355 (357)
T ss_pred             HHHHHHcCCcccCcCHHHHhc--Cchhc
Confidence            999999999999999999998  55543

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.92  E-value=2.1e-25  Score=172.53  Aligned_cols=132  Identities=22%  Similarity=0.303  Sum_probs=92.6

Q ss_pred             CCCCCCCCCeEEcC---CCCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTP---DQKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~---~~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      |||||||+|||+..   ..+.+||+|||+++.....    ......+||+.|+|||++.+       ...++.++|+||+
T Consensus       130 vHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~Diwsl  202 (317)
T cd07868         130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-------ARHYTKAIDIWAI  202 (317)
T ss_pred             EcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcC-------CCCcCchhhHHHH
Confidence            69999999999942   2357999999999754321    11234578999999998853       2457889999999


Q ss_pred             HHHHHHHHcCCCCCCCCCcHH--------HHHHHHHc--c-------------------------CCC----------CC
Q 029154           74 GIVLWELLTNRLPFEGMSNLQ--------AAYAAAFK--H-------------------------ARP----------GL  108 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~~~--------~~~~~~~~--~-------------------------~~~----------~~  108 (198)
                      ||++|+|++|++||.+.....        ........  .                         ...          ..
T Consensus       203 G~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (317)
T cd07868         203 GCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKH  282 (317)
T ss_pred             HHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhc
Confidence            999999999999996432100        00000000  0                         000          00


Q ss_pred             CCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154          109 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus       109 p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ....+.++.+++.+||..||.+|||++|+++
T Consensus       283 ~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         283 KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             CCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1123567889999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.92  E-value=1.2e-24  Score=164.37  Aligned_cols=134  Identities=32%  Similarity=0.567  Sum_probs=104.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-ccccc--CCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMT--AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+|||++.+ +.+||+|||+++.... .....  ...++..|++||.+.+        ..++.++|+||||+++
T Consensus       128 ~H~di~p~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--------~~~~~~~Dv~slG~~l  198 (266)
T cd05033         128 VHRDLAARNILVNSN-LVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY--------RKFTSASDVWSFGIVM  198 (266)
T ss_pred             ccCCCCcceEEEcCC-CCEEECccchhhcccccccceeccCCCCCccccChhhhcc--------CCCccccchHHHHHHH
Confidence            699999999999976 6799999999975431 11111  1234578999998753        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |++++ |..||....... ...........+.+..++..+.+++.+||..+|++||++.+++++|+.+
T Consensus       199 ~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         199 WEVMSYGERPYWDMSNQD-VIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHccCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99997 999997655433 2233333344455677899999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.92  E-value=1.2e-24  Score=162.92  Aligned_cols=132  Identities=33%  Similarity=0.577  Sum_probs=100.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||++.........   ....++..|++||.+.+        ..++.++|+||+|+++
T Consensus       116 ~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il  186 (252)
T cd05084         116 IHRDLAARNCLVTEK-NVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY--------GRYSSESDVWSFGILL  186 (252)
T ss_pred             cccccchheEEEcCC-CcEEECccccCcccccccccccCCCCCCceeecCchhhcC--------CCCChHHHHHHHHHHH
Confidence            699999999999976 67999999998753322111   11123457999998753        5578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |++++ |..||........ ............+..++..+.+++.+||..+|++||++.++++.|.
T Consensus       187 ~e~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         187 WEAFSLGAVPYANLSNQQT-REAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHhCCCCCccccCHHHH-HHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            99997 8888876554332 2223334455667778999999999999999999999999999774

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=4e-25  Score=175.81  Aligned_cols=136  Identities=23%  Similarity=0.374  Sum_probs=99.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......||..|+|||++.+        ..++.++||||+||++
T Consensus       207 vHrDlkp~Nill~~~-~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslGvil  277 (392)
T PHA03207        207 IHRDVKTENIFLDEP-ENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLAL--------DPYCAKTDIWSAGLVL  277 (392)
T ss_pred             cccCCCHHHEEEcCC-CCEEEccCccccccCcccccccccccccccCccCHhHhcC--------CCCCchhhHHHHHHHH
Confidence            799999999999976 679999999987543221   1224578999999999853        5678999999999999


Q ss_pred             HHHHcCCCCCCCCCcHH--HHHHHH---H-----------------------ccCCC--CCC-----CCCcHHHHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQ--AAYAAA---F-----------------------KHARP--GLP-----EDISPDLAFIVQS  122 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~--~~~~~~---~-----------------------~~~~~--~~p-----~~~~~~~~~l~~~  122 (198)
                      |||++|..||.+.....  ......   .                       ...++  ..+     ..++.++.+++.+
T Consensus       278 ~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  357 (392)
T PHA03207        278 FEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAK  357 (392)
T ss_pred             HHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHH
Confidence            99999999997643210  000000   0                       00011  011     2346788999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHHHhh
Q 029154          123 CWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       123 ~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ||..||.+||++.+++.  +.++..
T Consensus       358 ml~~dp~~Rpsa~e~l~--~p~f~~  380 (392)
T PHA03207        358 MLTFDQEFRPSAQDILS--LPLFTK  380 (392)
T ss_pred             HhccChhhCCCHHHHhh--Cchhhc
Confidence            99999999999999999  666644

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.92  E-value=1.8e-24  Score=168.60  Aligned_cols=137  Identities=31%  Similarity=0.620  Sum_probs=106.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....++..|++||++.+        ..++.++|+||||+++
T Consensus       156 vH~dlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  226 (334)
T cd05100         156 IHRDLAARNVLVTED-NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD--------RVYTHQSDVWSFGVLL  226 (334)
T ss_pred             eccccccceEEEcCC-CcEEECCcccceecccccccccccCCCcCceEcCHHHhcc--------CCcCchhhhHHHHHHH
Confidence            699999999999976 6799999999875432211   112234567999998853        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||++ |..||.+.... ..............+..++.++.+++.+||..+|.+||++.++++.|..+...
T Consensus       227 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         227 WEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            99998 88898775533 33333334445556677889999999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=6.1e-25  Score=166.05  Aligned_cols=132  Identities=27%  Similarity=0.503  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.............|+..|++||.+.+        ..++.++|+||||+++|++
T Consensus       136 ~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--------~~~~~~~Dv~slG~ll~~l  206 (269)
T cd08528         136 VHRDLTPNNIMLGED-DKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKN--------EPYGEKADVWAFGCILYQM  206 (269)
T ss_pred             eecCCCHHHEEECCC-CcEEEecccceeecccccccccccCcccCcChhhhcC--------CCCchHHHHHHHHHHHHHH
Confidence            599999999999976 6799999999975544333345578899999998853        4578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC-CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP-EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ++|..||........... .......+.+ ..+++.+.+++.+||..||++||++.++..++.
T Consensus       207 ~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         207 CTLQPPFYSTNMLSLATK-IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HhCCCcccccCHHHHHHH-HhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            999999976543332222 2222222222 357899999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.92  E-value=8.9e-25  Score=164.17  Aligned_cols=131  Identities=28%  Similarity=0.588  Sum_probs=101.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc--CCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT--AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||+++.........  ...++..|++||.+.+        ..++.++|+||||+++|
T Consensus       122 ~H~dl~p~ni~i~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--------~~~~~~~Di~slG~il~  192 (256)
T cd05059         122 IHRDLAARNCLVGED-NVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY--------SRFSSKSDVWSFGVLMW  192 (256)
T ss_pred             ccccccHhhEEECCC-CcEEECCcccceecccccccccCCCCCCccccCHHHhcc--------CCCCchhhHHHHHHHHH
Confidence            699999999999976 679999999987544322111  1223457999998753        56788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ++++ |..||........ ............+..++..+.+++.+||..+|++||++.++++.|
T Consensus       193 ~l~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         193 EVFSEGKMPYERFSNSEV-VESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHhccCCCCCCCCCHHHH-HHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            9998 7899976554332 333334445556677899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4e-26  Score=177.64  Aligned_cols=129  Identities=23%  Similarity=0.411  Sum_probs=98.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||..|+|||++.+       ...++.++|+||+||++|+
T Consensus       118 vHrDlkp~Nili~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DvwslGvil~e  189 (330)
T cd05586         118 VYRDLKPENILLDAT-GHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLD-------EKGYTKHVDFWSLGVLVFE  189 (330)
T ss_pred             EeccCCHHHeEECCC-CCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcC-------CCCCCCccceeccccEEEE
Confidence            699999999999976 6799999999874322 222345679999999998753       2457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCC-CCCcHHHHHHHHHhcccCCCCCC----CHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLP-EDISPDLAFIVQSCWVEDPNLRP----SFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~l~~~~l~~dp~~Rp----s~~~~l~  139 (198)
                      |++|..||.+...... ..... .....++ ..+++++.+++.+||..||.+||    ++.++++
T Consensus       190 lltG~~Pf~~~~~~~~-~~~i~-~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         190 MCCGWSPFYAEDTQQM-YRNIA-FGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             eccCCCCCCCCCHHHH-HHHHH-cCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            9999999987654332 22222 2223333 34789999999999999999998    5677766

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.92  E-value=4e-25  Score=168.18  Aligned_cols=141  Identities=27%  Similarity=0.493  Sum_probs=105.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||+++............++..|++||.+.+..    ....++.++|+||+|+++|+|
T Consensus       126 ~h~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~~~Di~slG~~l~~l  200 (283)
T cd06617         126 IHRDVKPSNVLINRN-GQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL----NQKGYDVKSDVWSLGITMIEL  200 (283)
T ss_pred             ecCCCCHHHEEECCC-CCEEEeecccccccccccccccccCCccccChhhcCCcc----cccccCccccchhhHHHHHHH
Confidence            699999999999976 679999999987544332223356888999999875311    114567899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC-CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP-EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ++|..||..................+..+ ..++.++.+++.+||..+|.+||++.++++  +.|+...
T Consensus       201 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~--~~~~~~~  267 (283)
T cd06617         201 ATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ--HPFFELH  267 (283)
T ss_pred             HhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc--Cchhhhc
Confidence            99999997543322222233333344444 347899999999999999999999999998  6665543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.92  E-value=1.1e-24  Score=163.29  Aligned_cols=129  Identities=28%  Similarity=0.468  Sum_probs=102.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||+++...... ......|+..|++||++..        ..++.++|+||||+++++
T Consensus       123 ~h~dl~~~nili~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~  193 (256)
T cd08529         123 LHRDIKSLNLFLDAY-DNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCED--------KPYNEKSDVWALGVVLYE  193 (256)
T ss_pred             ccCCCCcceEEEeCC-CCEEEcccccceeccCccchhhccccCccccCHHHhcC--------CCCCCccchHHHHHHHHH
Confidence            699999999999976 679999999987543322 2234568889999998753        557889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||....... ..........+..+..++.++.+++.+||+.+|++||++.++++
T Consensus       194 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         194 CCTGKHPFDANNQGA-LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHhCCCCCCCCCHHH-HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            999999997765332 22333344445566678899999999999999999999999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=3.8e-25  Score=157.30  Aligned_cols=130  Identities=28%  Similarity=0.372  Sum_probs=96.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|..-||+|||++.+ +.+|+  ||+++.....    ...|++.|+|||++.+        ..++.++|||||||++|||
T Consensus        33 lH~~~kp~Nil~~~~-~~~~~--fG~~~~~~~~----~~~g~~~y~aPE~~~~--------~~~~~~~DiwSlG~il~el   97 (176)
T smart00750       33 LHRQAKSGNILLTWD-GLLKL--DGSVAFKTPE----QSRVDPYFMAPEVIQG--------QSYTEKADIYSLGITLYEA   97 (176)
T ss_pred             HHhcCCcccEeEcCc-cceee--ccceEeeccc----cCCCcccccChHHhcC--------CCCcchhhHHHHHHHHHHH
Confidence            366669999999976 67888  9998754332    2368899999999854        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCC------CCCCCcH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPG------LPEDISP--DLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~------~p~~~~~--~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|..||....................      .+..++.  ++.+++.+||..+|.+||++.++++++....
T Consensus        98 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750       98 LDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            999999976544333322222222211      1122333  6899999999999999999999999776543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.92  E-value=1.7e-24  Score=166.65  Aligned_cols=136  Identities=25%  Similarity=0.494  Sum_probs=104.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....++..|++||.+.+        ..++.++|+||||+++
T Consensus       131 vH~dikp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~DiwslG~~l  201 (303)
T cd05110         131 VHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY--------RKFTHQSDVWSYGVTI  201 (303)
T ss_pred             eccccccceeeecCC-CceEEccccccccccCcccccccCCCccccccCCHHHhcc--------CCCChHHHHHHHHHHH
Confidence            699999999999866 6799999999975432211   112345678999998743        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||.+..... ..........+..+..++.++.+++.+||..+|++||++.++++.|+.+..
T Consensus       202 ~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         202 WELMTFGGKPYDGIPTRE-IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            99987 889997654322 222233334445556688999999999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.4e-25  Score=165.97  Aligned_cols=132  Identities=28%  Similarity=0.514  Sum_probs=108.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC-cccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |-||||-+|+||+++ +++||.|||+++.. ......++.|||+.|+|||++.        ...|+..+|+|.+|+++||
T Consensus       290 vYRDlKLENLlLDkD-GHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVle--------DnDYgraVDWWG~GVVMYE  360 (516)
T KOG0690|consen  290 VYRDLKLENLLLDKD-GHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLE--------DNDYGRAVDWWGVGVVMYE  360 (516)
T ss_pred             eeeechhhhheeccC-CceEeeecccchhcccccceeccccCChhhcCchhhc--------cccccceeehhhhhHHHHH
Confidence            469999999999988 79999999999843 3344567899999999999984        5789999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~  145 (198)
                      |++|+.||.+.++...  ..++......+|..+++++..|+..+|..||.+|.     .+.|+.+  +.++
T Consensus       361 MmCGRLPFyn~dh~kL--FeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~--h~FF  427 (516)
T KOG0690|consen  361 MMCGRLPFYNKDHEKL--FELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR--HRFF  427 (516)
T ss_pred             HHhccCcccccchhHH--HHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh--hhhh
Confidence            9999999987765433  23333455677899999999999999999999994     3666666  4444

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.92  E-value=9.1e-25  Score=164.87  Aligned_cols=134  Identities=28%  Similarity=0.404  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++....... ......|+..|+|||.+.+        ..++.++|+||+|+++|+
T Consensus       128 ~H~dl~~~nil~~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~~~Di~slG~~l~e  198 (267)
T cd08228         128 MHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--------NGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             eCCCCCHHHEEEcCC-CCEEECccccceeccchhHHHhcCCCCccccChhhhcc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 679999999987543322 1234568889999998753        457889999999999999


Q ss_pred             HHcCCCCCCCCCcH-HHHHHHHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNL-QAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        80 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      +++|..||...... ............++. +...+..+.+++.+||..+|++||++.++++.|+.
T Consensus       199 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~  264 (267)
T cd08228         199 MAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ  264 (267)
T ss_pred             HhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence            99999998654422 222222222222233 34577899999999999999999999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.92  E-value=2.3e-25  Score=176.56  Aligned_cols=135  Identities=25%  Similarity=0.384  Sum_probs=98.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-----------------------------------------------
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-----------------------------------------------   33 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-----------------------------------------------   33 (198)
                      |||||||+|||++.+ +.+||+|||+++.....                                               
T Consensus       123 vHrDlKp~Nili~~~-~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (381)
T cd05626         123 IHRDIKPDNILIDLD-GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQ  201 (381)
T ss_pred             eecCCcHHHEEECCC-CCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccc
Confidence            699999999999976 68999999997522100                                               


Q ss_pred             -ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--C
Q 029154           34 -EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--E  110 (198)
Q Consensus        34 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~  110 (198)
                       ......+||..|+|||++.+        ..++.++||||+||++|||++|..||.....................|  .
T Consensus       202 ~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  273 (381)
T cd05626         202 RCLAHSLVGTPNYIAPEVLLR--------KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQV  273 (381)
T ss_pred             ccccccccCCccccCHHHHcC--------CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCC
Confidence             00123479999999999853        567899999999999999999999998766443333322222223333  3


Q ss_pred             CCcHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHh
Q 029154          111 DISPDLAFIVQSCW--VEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       111 ~~~~~~~~l~~~~l--~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      .+++++.+++.+++  ..++..|+++.+++.  +.|+.
T Consensus       274 ~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~--hp~f~  309 (381)
T cd05626         274 KLSPEAVDLITKLCCSAEERLGRNGADDIKA--HPFFS  309 (381)
T ss_pred             CCCHHHHHHHHHHccCcccccCCCCHHHHhc--CcccC
Confidence            57899999999855  455556999999998  55543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.92  E-value=1.9e-24  Score=165.07  Aligned_cols=134  Identities=27%  Similarity=0.564  Sum_probs=104.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....++..|++||.+.+        ..++.++|+|||||++
T Consensus       141 ~H~dikp~nili~~~-~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--------~~~~~~~DvwslG~~l  211 (288)
T cd05061         141 VHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD--------GVFTTSSDMWSFGVVL  211 (288)
T ss_pred             cCCCCChheEEEcCC-CcEEECcCCccccccccccccccCCCcccccccCHHHhcc--------CCCChHhHHHHHHHHH
Confidence            699999999999976 6799999999874432111   112245678999998743        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ||+++ |..||.+..... .............+...++.+.+++.+||..||.+||++.++++.|...
T Consensus       212 ~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         212 WEITSLAEQPYQGLSNEQ-VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            99998 788887655433 3333334444556777889999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.92  E-value=1.3e-24  Score=166.49  Aligned_cols=133  Identities=28%  Similarity=0.507  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.++|+|||+++......   ......++..|++||.+..        ..++.++||||||+++
T Consensus       152 ~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l  222 (296)
T cd05051         152 VHRDLATRNCLVGKN-YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL--------GKFTTKSDVWAFGVTL  222 (296)
T ss_pred             cccccchhceeecCC-CceEEccccceeecccCcceeecCcCCCCceecCHHHhhc--------CCCCccchhhhhHHHH
Confidence            699999999999976 689999999987432221   1223456778999998753        4578999999999999


Q ss_pred             HHHHc--CCCCCCCCCcHHHHHHHHHc------cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT--NRLPFEGMSNLQAAYAAAFK------HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~--g~~p~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||+++  +..||...............      ......+..++.++.+++.+||+.||.+||++.++++.|+
T Consensus       223 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         223 WEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            99987  66788665433322111111      1112234456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.92  E-value=5.1e-26  Score=176.21  Aligned_cols=125  Identities=28%  Similarity=0.523  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++..... .......|+..|++||.+.+        ..++.++|+|||||++|+
T Consensus       120 ~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  190 (318)
T cd05582         120 IYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR--------RGHTQSADWWSFGVLMFE  190 (318)
T ss_pred             ecCCCCHHHeEECCC-CcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcC--------CCCCCccceeccceEeee
Confidence            699999999999976 67999999998754332 22334578999999999853        456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ  136 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~  136 (198)
                      |++|+.||.+.........  .......+|..+++++.+++.+||..||.+||++.+
T Consensus       191 l~tg~~p~~~~~~~~~~~~--i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         191 MLTGSLPFQGKDRKETMTM--ILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             eccCCCCCCCCCHHHHHHH--HHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            9999999987664333222  223445667789999999999999999999999554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.92  E-value=5.9e-25  Score=167.77  Aligned_cols=130  Identities=22%  Similarity=0.378  Sum_probs=100.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+||+++.+ +.+||+|||++.............|+..|+|||++.+        ..++.++|+||+|+++|++
T Consensus       124 iH~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~--------~~~~~~~Di~slG~~l~~l  194 (285)
T cd05632         124 VYRDLKPENILLDDY-GHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNN--------QRYTLSPDYWGLGCLIYEM  194 (285)
T ss_pred             eecCCCHHHEEECCC-CCEEEecCCcceecCCCCcccCCCCCcCccChHHhcC--------CCCCcccchHHHHHHHHHH
Confidence            699999999999976 6799999999865433333344578999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHH--HHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 029154           81 LTNRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~  139 (198)
                      ++|..||.+.......  ............+..+++++.+|+.+||..||.+||+     +.+++.
T Consensus       195 ~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         195 IEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            9999999876543221  1111222233445668899999999999999999999     677777

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.92  E-value=1.2e-24  Score=163.78  Aligned_cols=133  Identities=31%  Similarity=0.548  Sum_probs=104.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.++|+|||++........  .....++..|++||.+..        ..++.++|+||||+++|
T Consensus       124 ~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--------~~~~~~~Di~slG~~l~  194 (260)
T cd05067         124 IHRDLRAANILVSET-LCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY--------GTFTIKSDVWSFGILLT  194 (260)
T ss_pred             ecccccHHhEEEcCC-CCEEEccCcceeecCCCCcccccCCcccccccCHHHhcc--------CCcCcccchHHHHHHHH
Confidence            699999999999976 6799999999875432211  122345678999998753        45788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++++ |..||.+..... .............+...+.++.+++.+||..+|++||++++++..|+.
T Consensus       195 el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         195 EIVTYGRIPYPGMTNPE-VIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHhCCCCCCCCCChHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            9998 999998765433 223333344455667788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=1.1e-24  Score=163.95  Aligned_cols=128  Identities=26%  Similarity=0.454  Sum_probs=97.5

Q ss_pred             CCCCCCCCCeEEcCCCCc-------eEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKS-------LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~-------~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      +||||||+||+++.++..       ++++|||++......   ....++..|++||++..       ...++.++|+|||
T Consensus       122 iH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~-------~~~~~~~~Diwsl  191 (258)
T cd05078         122 THGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK---EILLERIPWVPPECIEN-------PQNLSLAADKWSF  191 (258)
T ss_pred             ecCCCccceEEEecccccccCCCceEEecccccccccCCc---hhccccCCccCchhccC-------CCCCCchhhHHHH
Confidence            699999999999866432       699999998644322   23467889999999853       2456889999999


Q ss_pred             HHHHHHHHcCC-CCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           74 GIVLWELLTNR-LPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        74 G~~l~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |+++|++++|. .|+......... ..  ......+|...+.++.+++.+||+.||.+||+++++++.|
T Consensus       192 G~~l~~l~~g~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         192 GTTLWEIFSGGDKPLSALDSQKKL-QF--YEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHHHHcCCCCChhhccHHHHH-HH--HHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            99999999985 666554432221 11  1234456666778999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.92  E-value=1.1e-24  Score=163.82  Aligned_cols=129  Identities=26%  Similarity=0.423  Sum_probs=103.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++........ .....++..|++||.+..        ..++.++|+||||+++++
T Consensus       132 ~h~dl~p~nili~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~--------~~~~~~~Dv~slG~il~~  202 (265)
T cd08217         132 LHRDLKPANIFLDAN-NNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNH--------MSYDEKSDIWSLGCLIYE  202 (265)
T ss_pred             eecCCCHHHEEEecC-CCEEEecccccccccCCcccccccccCCCccChhhhcC--------CCCCchhHHHHHHHHHHH
Confidence            699999999999966 7899999999876543332 334578899999999853        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||..... ............+.++..++.++.+++.+||..+|.+||++.++++
T Consensus       203 l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         203 LCALSPPFTARNQ-LQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHCCCcccCcCH-HHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            9999999987653 2223333334444567778899999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.92  E-value=1.6e-24  Score=164.00  Aligned_cols=134  Identities=27%  Similarity=0.550  Sum_probs=103.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ ..+||+|||+++.......   .....++..|++||.+..        ..++.++|+||||+++
T Consensus       135 ~H~dikp~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~sDi~slG~il  205 (273)
T cd05074         135 IHRDLAARNCMLNEN-MTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD--------NVYTTHSDVWAFGVTM  205 (273)
T ss_pred             eecccchhhEEEcCC-CCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc--------CccchhhhhHHHHHHH
Confidence            699999999999866 6799999999875432221   122345678999998743        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |++++ |..||.+.... ..............+...+..+.+++.+||..+|++||++.++++.|+.+
T Consensus       206 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         206 WEIMTRGQTPYAGVENS-EIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHhhCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99998 88898766543 23333334444455567889999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.92  E-value=1.2e-24  Score=164.28  Aligned_cols=135  Identities=27%  Similarity=0.408  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++....... ......|+..|++||.+.+        ..++.++|+||||+++|+
T Consensus       128 ~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~--------~~~~~~~Dv~slG~il~~  198 (267)
T cd08229         128 MHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--------NGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             ecCCCCHHHEEEcCC-CCEEECcchhhhccccCCcccccccCCcCccCHHHhcC--------CCccchhhHHHHHHHHHH
Confidence            699999999999976 679999999987543322 1234568889999998753        557889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHH-HHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYA-AAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +++|..||.+......... .......+.. +..+++.+.+++.+||..||.+|||+.++++.+...
T Consensus       199 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         199 MAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            9999999976543222221 2222222222 345788999999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.92  E-value=1.1e-24  Score=166.97  Aligned_cols=139  Identities=28%  Similarity=0.529  Sum_probs=103.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++.............++..|++||.+.+..    ....++.++|+||||+++|++
T Consensus       137 ~H~dl~p~nill~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~~~Di~slG~il~el  211 (296)
T cd06618         137 IHRDVKPSNILLDAS-GNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPD----PNPKYDIRADVWSLGISLVEL  211 (296)
T ss_pred             ecCCCcHHHEEEcCC-CCEEECccccchhccCCCcccCCCCCccccCHhhcCCCC----CccccccchhHHHHHHHHHHH
Confidence            699999999999966 689999999987544333233345788999999875310    013477899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|+.||..................+..+  ..++.++.+++.+||..||.+||++.++++  +.|+.
T Consensus       212 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~--~~~~~  277 (296)
T cd06618         212 ATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ--HPFIR  277 (296)
T ss_pred             HhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc--Chhhh
Confidence            99999997644322333333333333333  236889999999999999999999999998  55544

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-25  Score=182.80  Aligned_cols=137  Identities=31%  Similarity=0.566  Sum_probs=116.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCC--ccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETG--TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~g--t~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||...|||++.+ -.+|++|||++|...+..  .+++.-|  ...|.|||.+.        .+.++.++||||||++
T Consensus       753 VHRDLAARNILVNsn-LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa--------~RKFTsASDVWSyGIV  823 (996)
T KOG0196|consen  753 VHRDLAARNILVNSN-LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIA--------YRKFTSASDVWSYGIV  823 (996)
T ss_pred             hhhhhhhhheeeccc-eEEEeccccceeecccCCCccccccCCccceeecChhHhh--------hcccCchhhccccceE
Confidence            799999999999976 689999999999553332  2333333  46899999985        5889999999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +||.++ |..||-.+.+ ++......+..+.+.|-+++..+..||..||++|-..||.|.+|+..|+..+..
T Consensus       824 mWEVmSyGERPYWdmSN-QdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  824 MWEVMSYGERPYWDMSN-QDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             EEEecccCCCcccccch-HHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            999874 9999988776 455666777888888999999999999999999999999999999999988764

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.92  E-value=2.5e-24  Score=162.82  Aligned_cols=136  Identities=28%  Similarity=0.569  Sum_probs=106.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc--CCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT--AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||+++.........  ...++..|++||.+..        ..++.++|+||||+++|
T Consensus       129 ~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~  199 (270)
T cd05056         129 VHRDIAARNVLVSSP-DCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINF--------RRFTSASDVWMFGVCMW  199 (270)
T ss_pred             eccccChheEEEecC-CCeEEccCceeeecccccceecCCCCccccccChhhhcc--------CCCCchhhhHHHHHHHH
Confidence            699999999999976 679999999987543322111  2234567999998743        56788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |+++ |..||.+...... ............+..++..+.+++.+||..+|.+||++.++++.|+.+..
T Consensus       200 el~~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         200 EILMLGVKPFQGVKNNDV-IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHcCCCCCCCCCHHHH-HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            9885 9999987665333 23333444556677889999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=8.8e-25  Score=174.76  Aligned_cols=136  Identities=29%  Similarity=0.547  Sum_probs=115.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccC--CCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTA--ETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||...|.|+..+ ..+||+|||+++.+.......+  ......|.|||.+.        ...++.|+|||+||+++|
T Consensus       387 IHRDLAARNCLVgEn-hiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLA--------yNtFSiKSDVWAFGVLLW  457 (1157)
T KOG4278|consen  387 IHRDLAARNCLVGEN-HIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--------YNTFSIKSDVWAFGVLLW  457 (1157)
T ss_pred             hhhhhhhhhcccccc-ceEEeeccchhhhhcCCceecccCccCcccccCccccc--------ccccccchhhHHHHHHHH
Confidence            799999999999976 6799999999998766543221  23467899999884        467899999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |+.| |..||.+.+ ..+.+..+....+...|+.+++.+..||+.||...|++||+|.|+.+.++..+.
T Consensus       458 EIATYGMsPYPGid-lSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  458 EIATYGMSPYPGID-LSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             HHHhcCCCCCCCcc-HHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            9986 889999866 455677777788889999999999999999999999999999999998877653

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.92  E-value=1e-24  Score=167.04  Aligned_cols=140  Identities=29%  Similarity=0.482  Sum_probs=105.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++...... .......|+..|+|||.+..        ..++.++|+||+|+++||
T Consensus       140 vH~dlkp~Nill~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slGvil~e  210 (292)
T cd06658         140 IHRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISR--------LPYGTEVDIWSLGIMVIE  210 (292)
T ss_pred             eecCCCHHHEEEcCC-CCEEEccCcchhhcccccccCceeecCccccCHHHHcc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 67999999998643221 11233568899999998743        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~  152 (198)
                      +++|..||.......... .........  .....+..+.+++.+||..||.+||+++++++  +.|+....++.
T Consensus       211 l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~--~~~~~~~~~~~  282 (292)
T cd06658         211 MIDGEPPYFNEPPLQAMR-RIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ--HPFLKLAGPPS  282 (292)
T ss_pred             HHhCCCCCCCCCHHHHHH-HHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhh--ChhhhccCCcc
Confidence            999999998765443322 222222222  22347889999999999999999999999998  77766555443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.92  E-value=1.5e-25  Score=174.05  Aligned_cols=124  Identities=27%  Similarity=0.389  Sum_probs=97.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+|+..|+|||++.+        ..++.++|+||+||++|+
T Consensus       118 vH~Dlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~e  188 (325)
T cd05604         118 VYRDLKPENILLDSQ-GHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRK--------QPYDNTVDWWCLGAVLYE  188 (325)
T ss_pred             eecCCCHHHeEECCC-CCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcC--------CCCCCcCccccccceehh
Confidence            699999999999976 6799999999874322 222334579999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      |++|..||........ ..... ......+...+..+.+++.+||..+|.+||++.
T Consensus       189 l~~G~~pf~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         189 MLYGLPPFYCRDVAEM-YDNIL-HKPLVLRPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             hhcCCCCCCCCCHHHH-HHHHH-cCCccCCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence            9999999987654332 22222 233344556889999999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.92  E-value=6.5e-25  Score=165.77  Aligned_cols=129  Identities=29%  Similarity=0.513  Sum_probs=100.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.+||+|||+++.....    .......++..|+|||.+.+        ..++.++|+||+||+
T Consensus       128 ~H~~l~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~i  198 (266)
T cd06651         128 VHRDIKGANILRDSA-GNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG--------EGYGRKADVWSLGCT  198 (266)
T ss_pred             eeCCCCHHHEEECCC-CCEEEccCCCccccccccccCCccccCCccccccCHHHhCC--------CCCCchhhhHHHHHH
Confidence            699999999999966 67999999998743211    11123457889999998853        557889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +|++++|+.||..................+.+|..+++.+.+++ +||..+|++||+++++++
T Consensus       199 ~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         199 VVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             HHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            99999999999876554444333333344566777889999998 677789999999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.92  E-value=9.4e-25  Score=163.83  Aligned_cols=129  Identities=30%  Similarity=0.481  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++++|||++....... ......|+..|+|||++.+        ..++.++|+||+|+++|+
T Consensus       122 ~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~~~Dv~slG~i~~~  192 (255)
T cd08219         122 LHRDIKSKNIFLTQN-GKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWEN--------MPYNNKSDIWSLGCILYE  192 (255)
T ss_pred             ccCCCCcceEEECCC-CcEEEcccCcceeecccccccccccCCccccCHHHHcc--------CCcCchhhhhhhchhhee
Confidence            699999999999976 679999999987543222 2234568889999998753        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |++|..||........ ............+..++..+.+++.+||..||.+||++.+++.
T Consensus       193 l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         193 LCTLKHPFQANSWKNL-ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             hhhccCCCCCCCHHHH-HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence            9999999987554332 2333344444567778999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.92  E-value=1.2e-24  Score=163.02  Aligned_cols=130  Identities=28%  Similarity=0.454  Sum_probs=104.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.++..+||+|||++.............|+..|++||.+.+        ..++.++|+||+|+++|++
T Consensus       123 ~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~~l  194 (256)
T cd08220         123 LHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEG--------KPYNQKSDIWALGCVLYEL  194 (256)
T ss_pred             ecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccC--------CCCCcccchHHHHHHHHHH
Confidence            69999999999986656789999999976544333334568889999998753        4567899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|..||.+...... ............+..+++++.+++.+||..+|.+||++.++++
T Consensus       195 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         195 ASLKRAFEAANLPAL-VLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HhCCCCcccCchHHH-HHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            999999977654332 2333334445567778999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=1.3e-24  Score=163.99  Aligned_cols=129  Identities=27%  Similarity=0.526  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-------cccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      +||||||+||+++.+ +.+||+|||+++......       ......|+..|++||.+.+        ..++.++|+||+
T Consensus       128 vH~di~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--------~~~~~~~Dv~sl  198 (267)
T cd06628         128 IHRDIKGANILVDNK-GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ--------TSYTRKADIWSL  198 (267)
T ss_pred             ccccCCHHHEEEcCC-CCEEecccCCCcccccccccCCccccccccCCCcCccChhHhcc--------CCCCchhhhHHH
Confidence            699999999999866 679999999987543211       1112357889999998753        457889999999


Q ss_pred             HHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           74 GIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |+++|++++|..||.+....... ........+.++..++..+.+++.+||+.||.+||++.++++
T Consensus       199 G~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         199 GCLVVEMLTGKHPFPDCTQLQAI-FKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHHHhhCCCCCCCccHHHHH-HHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            99999999999999876543332 233334556677789999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.92  E-value=1.4e-24  Score=165.26  Aligned_cols=140  Identities=27%  Similarity=0.446  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++...... .......++..|++||++....   .....++.++|+||+||++|+
T Consensus       125 ~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~~~~~~Dv~slGvil~e  200 (282)
T cd06643         125 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET---SKDRPYDYKADVWSLGITLIE  200 (282)
T ss_pred             eecCCCcccEEEccC-CCEEEccccccccccccccccccccccccccCHhhccccC---CCCCCCCccchhhhHHHHHHH
Confidence            699999999999976 67999999998654322 1223456889999999874211   012456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..||................ .....+..++.++.+++.+||..||.+||++.++++  +.++.
T Consensus       201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--~~~~~  266 (282)
T cd06643         201 MAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ--HPFVT  266 (282)
T ss_pred             HccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc--CCCEe
Confidence            999999998765443332222111 122345668899999999999999999999999988  55543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.92  E-value=2.4e-24  Score=162.45  Aligned_cols=135  Identities=30%  Similarity=0.452  Sum_probs=103.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++....... ......++..|++||.+.+        ..++.++|+||||+++|+
T Consensus       128 ~h~dl~p~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~--------~~~~~~~Di~slG~il~~  198 (267)
T cd08224         128 MHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--------NGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             ecCCcChhhEEECCC-CcEEEeccceeeeccCCCcccceecCCccccCHHHhcc--------CCCCchhcHHHHHHHHHH
Confidence            699999999999976 679999999987543221 1223467889999998753        557889999999999999


Q ss_pred             HHcCCCCCCCCCc-HHHHHHHHHccCCCCCCC-CCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSN-LQAAYAAAFKHARPGLPE-DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        80 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +++|..||..... .............++.|. .++.++.+++.+||..+|++||++.++++.|+.+
T Consensus       199 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         199 MAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            9999999965442 222222222233334444 6788999999999999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.92  E-value=3.2e-25  Score=175.09  Aligned_cols=139  Identities=25%  Similarity=0.373  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||++.......  .....+||+.|+|||++...    .....++.++|+||+||++|
T Consensus       164 vHrDLKp~NILl~~~-~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~~~~~~DiwSlG~ily  238 (370)
T cd05621         164 IHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQ----GGDGYYGRECDWWSVGVFLF  238 (370)
T ss_pred             EecCCCHHHEEECCC-CCEEEEecccceecccCCceecccCCCCcccCCHHHHhcc----CCCCCCCcccCEEeehHHHH
Confidence            699999999999976 689999999997543222  22356799999999998531    01134678999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC--CCcHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHHh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQSCWVEDPNL--RPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~~l~~~~~  146 (198)
                      +|++|..||.+...................|.  .++..+.+++.+||..++..  |+++.++++  +.|+.
T Consensus       239 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~--hp~~~  308 (370)
T cd05621         239 EMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ--HPFFK  308 (370)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc--CcccC
Confidence            99999999987664433322222222334444  46899999999999855543  889999999  56654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.92  E-value=8.1e-25  Score=166.52  Aligned_cols=135  Identities=25%  Similarity=0.399  Sum_probs=100.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++...... .......|+..|+|||.+....   .....++.++|+||||+++|+
T Consensus       143 vH~dl~~~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~---~~~~~~~~~~DvwslG~~l~e  218 (282)
T cd06636         143 IHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE---NPDATYDYRSDIWSLGITAIE  218 (282)
T ss_pred             ccCCCCHHHEEECCC-CCEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc---CcCcCCCcccchhHHHHHHHH
Confidence            699999999999976 67999999998744321 1223456889999999874210   012456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||........................++.++.+++.+||..||.+||++.++++
T Consensus       219 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         219 MAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            999999997655433332222111222223457899999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.6e-24  Score=160.96  Aligned_cols=132  Identities=32%  Similarity=0.566  Sum_probs=100.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||++.........   ....++..|++||.+.+        ..++.++|+||||+++
T Consensus       115 ~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~slG~i~  185 (251)
T cd05041         115 IHRDLAARNCLVGEN-NVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY--------GRYTSESDVWSYGILL  185 (251)
T ss_pred             ehhhcCcceEEEcCC-CcEEEeeccccccccCCcceeccccCcceeccCChHhhcc--------CCCCcchhHHHHHHHH
Confidence            699999999999976 67999999998754321111   11233567999998753        5678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |++++ |..||........ ............+..++..+.+++.+||..+|.+||++.++++.|+
T Consensus       186 ~~l~t~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         186 WETFSLGDTPYPGMSNQQT-RERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHhccCCCCccCCHHHH-HHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            99998 7888876654332 2222233344556778999999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.92  E-value=2.4e-24  Score=161.90  Aligned_cols=131  Identities=27%  Similarity=0.534  Sum_probs=101.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc--cCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM--TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||+++........  ....++..|++||.+.+        ..++.++|+||||+++|
T Consensus       122 ~H~dl~p~nili~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--------~~~~~~~Di~slG~~l~  192 (256)
T cd05113         122 IHRDLAARNCLVDDQ-GCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY--------SKFSSKSDVWAFGVLMW  192 (256)
T ss_pred             eccccCcceEEEcCC-CCEEECCCccceecCCCceeecCCCccChhhCCHHHHhc--------CcccchhHHHHHHHHHH
Confidence            699999999999966 67999999998754332211  11234568999998753        45788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ++++ |..||....... .............+...+..+.+++.+||..+|.+||++.+++..|
T Consensus       193 ~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         193 EVYSLGKMPYERFNNSE-TVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             HHhcCCCCCcCcCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence            9998 999997655432 2233333444455666789999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.92  E-value=1.2e-25  Score=174.92  Aligned_cols=139  Identities=24%  Similarity=0.386  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||++........  .....||+.|+|||++.....  .....++.++|||||||++|
T Consensus       124 ~H~Dlkp~NIll~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~~~DiwslG~il~  200 (330)
T cd05601         124 VHRDIKPENVLIDRT-GHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNG--DGKGTYGVECDWWSLGVIAY  200 (330)
T ss_pred             EcccCchHheEECCC-CCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccc--cccCCCCCcceeecccceee
Confidence            699999999999976 6799999999975432221  223478999999998753110  01245778999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      +|++|..||.+...................|  ..+++++.+++.+||. +|.+||++.+++.  +.|+
T Consensus       201 el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~--h~~~  266 (330)
T cd05601         201 EMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC--HPFF  266 (330)
T ss_pred             eeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC--CCCc
Confidence            9999999998765433322222111112223  3478999999999997 9999999999987  5444

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.6e-24  Score=164.29  Aligned_cols=134  Identities=30%  Similarity=0.506  Sum_probs=104.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.++|+|||+++..... .......++..|++||.+.+        ..++.++|+||||+++|+
T Consensus       120 ~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~sDv~slG~il~~  190 (274)
T cd06609         120 IHRDIKAANILLSEE-GDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQ--------SGYDEKADIWSLGITAIE  190 (274)
T ss_pred             ccCCCCHHHEEECCC-CCEEEcccccceeecccccccccccCCccccChhhhcc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 67999999999754432 22234568889999999853        457899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..||......... ........+..+.. +++++.+++.+||..+|.+||+++++++  +.|+.
T Consensus       191 l~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~--~~~~~  255 (274)
T cd06609         191 LAKGEPPLSDLHPMRVL-FLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK--HKFIK  255 (274)
T ss_pred             HHhCCCCcccCchHHHH-HHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh--Chhhc
Confidence            99999999765543322 22233344444555 7899999999999999999999999998  66654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.92  E-value=3.3e-24  Score=161.99  Aligned_cols=133  Identities=29%  Similarity=0.608  Sum_probs=102.2

Q ss_pred             CCCCCCCCCeEEcCCC----CceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ----KSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~~----~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      +|+||||+||+++.++    ..++|+|||+++.......   .....++..|++||.+..        ..++.++|+|||
T Consensus       128 ~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~sl  199 (269)
T cd05044         128 IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD--------GKFTTQSDVWSF  199 (269)
T ss_pred             ccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHcc--------CCcccchhHHHH
Confidence            6999999999998653    1699999999874432211   122345678999998753        567889999999


Q ss_pred             HHHHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           74 GIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        74 G~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |+++|++++ |..||........ ............+..++..+.+++.+||..+|.+||++.++++.|+
T Consensus       200 G~il~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         200 GVLMWEILTLGQQPYPALNNQEV-LQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHHHHcCCCCCcccCHHHH-HHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            999999997 9999976554332 2222333445566778899999999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.92  E-value=1.3e-24  Score=164.18  Aligned_cols=133  Identities=26%  Similarity=0.498  Sum_probs=101.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+.+.+||+|||++..... ........|+..|++||.+..      ....++.++|+||+|+++|+
T Consensus       130 ~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~~~~Dv~slGvvl~~  203 (268)
T cd06624         130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDK------GPRGYGAPADIWSLGCTIVE  203 (268)
T ss_pred             eecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhcc------ccccCCchhhhHHHHHHHHH
Confidence            69999999999986556899999999864332 122223467889999998743      12346789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHH-HHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAA-YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||......... .........+.+|..+++++.+++.+||..+|.+||++.+++.
T Consensus       204 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         204 MATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            99999999754432222 2222223445567778999999999999999999999999988

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.4e-25  Score=174.54  Aligned_cols=133  Identities=24%  Similarity=0.440  Sum_probs=98.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---------------------------------------cccCCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---------------------------------------MMTAETG   41 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---------------------------------------~~~~~~g   41 (198)
                      |||||||+|||++.+ +.+||+|||++.......                                       .....+|
T Consensus       123 vH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  201 (364)
T cd05599         123 IHRDIKPDNLLLDAK-GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVG  201 (364)
T ss_pred             EeccCCHHHeEECCC-CCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence            699999999999976 679999999986322110                                       0112468


Q ss_pred             ccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC--CCcHHHHHH
Q 029154           42 TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFI  119 (198)
Q Consensus        42 t~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~l  119 (198)
                      |+.|+|||++..        ..++.++|+||+||++|||++|..||.+...................|.  .+++++.++
T Consensus       202 t~~y~aPE~~~~--------~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  273 (364)
T cd05599         202 TPDYIAPEVFLQ--------TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDL  273 (364)
T ss_pred             CccccCHHHHcC--------CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHH
Confidence            999999999753        5678999999999999999999999987665433322221122223333  468999999


Q ss_pred             HHHhcccCCCCCCC---HHHHHHHHHHHH
Q 029154          120 VQSCWVEDPNLRPS---FSQIIRMLNAFL  145 (198)
Q Consensus       120 ~~~~l~~dp~~Rps---~~~~l~~l~~~~  145 (198)
                      +.+|+. +|.+|++   +.++++  +.|+
T Consensus       274 i~~ll~-~p~~R~~~~~~~~ll~--h~~~  299 (364)
T cd05599         274 IKRLCC-EAERRLGNNGVNEIKS--HPFF  299 (364)
T ss_pred             HHHHcc-CHhhcCCCCCHHHHhc--CCCc
Confidence            999996 8999987   998888  4444

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.92  E-value=4.5e-25  Score=170.58  Aligned_cols=132  Identities=22%  Similarity=0.314  Sum_probs=92.1

Q ss_pred             CCCCCCCCCeEEcC---CCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTP---DQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~---~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      |||||||+|||+..   +.+.+||+|||+++......    ......||..|+|||++.+       ...++.++||||+
T Consensus       130 vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwSl  202 (317)
T cd07867         130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-------ARHYTKAIDIWAI  202 (317)
T ss_pred             EcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcC-------CCccCcHHHHHhH
Confidence            69999999999942   23579999999997543221    1234568899999998753       2457889999999


Q ss_pred             HHHHHHHHcCCCCCCCCCcHH--------HHHHHHHc--cC-----------C------------------------CCC
Q 029154           74 GIVLWELLTNRLPFEGMSNLQ--------AAYAAAFK--HA-----------R------------------------PGL  108 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~~~--------~~~~~~~~--~~-----------~------------------------~~~  108 (198)
                      ||++|||++|.+||.......        ........  ..           .                        ...
T Consensus       203 G~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (317)
T cd07867         203 GCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKH  282 (317)
T ss_pred             HHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcc
Confidence            999999999999986432110        00000000  00           0                        000


Q ss_pred             CCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154          109 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus       109 p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ....+..+.+++.+||..||.+|||+.|+++
T Consensus       283 ~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         283 KVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             cCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence            1123566889999999999999999999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.9e-25  Score=186.41  Aligned_cols=139  Identities=24%  Similarity=0.387  Sum_probs=107.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc--cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV--TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||||.. |++||+|||.+-.+..  .....+.+|||-|.+||++...   ....+.|+..+|+||+|+++|
T Consensus       197 VHRDiKPDNvLld~~-GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~---~~~~g~yG~ecDwWSlGV~~Y  272 (1317)
T KOG0612|consen  197 VHRDIKPDNVLLDKS-GHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQ---GDGKGEYGRECDWWSLGVFMY  272 (1317)
T ss_pred             eeccCCcceeEeccc-CcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhh---cCCccccCCccchhhhHHHHH
Confidence            799999999999987 8999999998865442  2234567999999999998541   112377899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCC---HHHHHHHHHHHHh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPS---FSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps---~~~~l~~l~~~~~  146 (198)
                      ||+.|..||+...-....-.++.......+|  ..+++++.+||.+.+. +|..|..   ++++..  |.|+.
T Consensus       273 EMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~--HpFF~  342 (1317)
T KOG0612|consen  273 EMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN--HPFFE  342 (1317)
T ss_pred             HHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh--Ccccc
Confidence            9999999998755433333334344455666  4589999999999875 6889987   899888  55554

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=8e-25  Score=171.16  Aligned_cols=136  Identities=34%  Similarity=0.536  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCC-CCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAE-TGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      ||||||++|||||.+ ..+||+|||+++.... .....+. .||.+|++||++..        +..+.++||||||+++.
T Consensus       199 iHrDiKssNILLD~~-~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~--------g~lt~KsDVySFGVvll  269 (361)
T KOG1187|consen  199 IHRDIKSSNILLDED-FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST--------GKLTEKSDVYSFGVVLL  269 (361)
T ss_pred             ecCCCCHHHeeECCC-CCEEccCccCcccCCccccceeeecCCCCccCChhhhcc--------CCcCcccccccchHHHH
Confidence            799999999999976 7899999999976543 3322233 89999999999853        56789999999999999


Q ss_pred             HHHcCCCCCCCCC-----cHHHHHHHHH------ccCCCCCC-CCCc-----HHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           79 ELLTNRLPFEGMS-----NLQAAYAAAF------KHARPGLP-EDIS-----PDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        79 e~~~g~~p~~~~~-----~~~~~~~~~~------~~~~~~~p-~~~~-----~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |+++|+.+.....     ..........      +...+.+. ...+     ..+..+..+|+..+|.+||+|.+|+++|
T Consensus       270 Elitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L  349 (361)
T KOG1187|consen  270 ELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL  349 (361)
T ss_pred             HHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence            9999998776322     1111111111      11222222 2233     2255788999999999999999999988


Q ss_pred             HHHH
Q 029154          142 NAFL  145 (198)
Q Consensus       142 ~~~~  145 (198)
                      +...
T Consensus       350 ~~~~  353 (361)
T KOG1187|consen  350 EGIL  353 (361)
T ss_pred             Hhhc
Confidence            5543

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.91  E-value=3.2e-24  Score=163.79  Aligned_cols=132  Identities=28%  Similarity=0.552  Sum_probs=101.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.++|+|||++........   .....++..|+|||.+.+        ..++.++|+|||||++
T Consensus       152 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il  222 (288)
T cd05050         152 VHRDLATRNCLVGEN-MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY--------NRYTTESDVWAYGVVL  222 (288)
T ss_pred             ecccccHhheEecCC-CceEECccccceecccCccccccCCCccChhhcCHHHHhc--------CCCCchhHHHHHHHHH
Confidence            699999999999876 6799999999874332211   112344667999998743        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |++++ |..||.+..... .............+..++.++.+++.+||..||.+||++.|+++.|+
T Consensus       223 ~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         223 WEIFSYGMQPYYGMAHEE-VIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            99997 888887665433 22333333444456678899999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.91  E-value=3.6e-25  Score=175.49  Aligned_cols=133  Identities=26%  Similarity=0.432  Sum_probs=97.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-----------------------------------------------
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-----------------------------------------------   33 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-----------------------------------------------   33 (198)
                      |||||||+|||++.+ +.+||+|||++......                                               
T Consensus       123 vHrDlKp~NILl~~~-g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (382)
T cd05625         123 IHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQ  201 (382)
T ss_pred             ecCCCCHHHEEECCC-CCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence            699999999999976 68999999997421100                                               


Q ss_pred             -ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--C
Q 029154           34 -EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--E  110 (198)
Q Consensus        34 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~  110 (198)
                       ......+||+.|+|||++.+        ..++.++|+||+||++|||++|..||.+...................|  .
T Consensus       202 ~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~  273 (382)
T cd05625         202 RCLAHSLVGTPNYIAPEVLLR--------TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQA  273 (382)
T ss_pred             cccccccccCcccCCHHHhcC--------CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcc
Confidence             00113468999999999853        567899999999999999999999998766544333322212222233  4


Q ss_pred             CCcHHHHHHHHHhcccCCCCCCC---HHHHHHHHHHHH
Q 029154          111 DISPDLAFIVQSCWVEDPNLRPS---FSQIIRMLNAFL  145 (198)
Q Consensus       111 ~~~~~~~~l~~~~l~~dp~~Rps---~~~~l~~l~~~~  145 (198)
                      .+++++.+++.+++ .+|.+|++   +.++++  |.|+
T Consensus       274 ~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~--hp~f  308 (382)
T cd05625         274 KLSPEASDLIIKLC-RGPEDRLGKNGADEIKA--HPFF  308 (382)
T ss_pred             cCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc--CCCc
Confidence            57899999999976 59999987   888877  4443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=4.2e-24  Score=163.72  Aligned_cols=133  Identities=25%  Similarity=0.456  Sum_probs=98.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||++........   .....++..|+|||.+..        ..++.++|+||||+++
T Consensus       151 ~H~dlkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwSlG~~l  221 (295)
T cd05097         151 VHRDLATRNCLVGNH-YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL--------GKFTTASDVWAFGVTL  221 (295)
T ss_pred             eccccChhhEEEcCC-CcEEecccccccccccCcceeccCcCcCceeecChhhhcc--------CCcCchhhHHHHHHHH
Confidence            699999999999966 6799999999874322211   122345678999998753        5678999999999999


Q ss_pred             HHHHc--CCCCCCCCCcHHHHHHHH--H----ccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT--NRLPFEGMSNLQAAYAAA--F----KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~--g~~p~~~~~~~~~~~~~~--~----~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |++++  +..||.............  .    .......+..+++.+.+++.+||..||.+||+++++++.|+
T Consensus       222 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         222 WEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            99987  667887654332211110  0    11112335567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.91  E-value=1.3e-24  Score=163.83  Aligned_cols=134  Identities=29%  Similarity=0.541  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.++|+|||++........ ....++..|++||.+.+        ..++.++|+||+|+++|++
T Consensus       123 ~H~dl~~~ni~~~~~-~~~~l~d~g~~~~~~~~~~-~~~~~~~~y~~PE~~~~--------~~~~~~~Dv~slG~~l~~l  192 (265)
T cd06605         123 IHRDVKPSNILVNSR-GQIKLCDFGVSGQLVNSLA-KTFVGTSSYMAPERIQG--------NDYSVKSDIWSLGLSLIEL  192 (265)
T ss_pred             ecCCCCHHHEEECCC-CCEEEeecccchhhHHHHh-hcccCChhccCHHHHcC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 6799999999864432211 12668889999998753        4678899999999999999


Q ss_pred             HcCCCCCCCCC----cHHHHHHHHHccCCCCCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMS----NLQAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~----~~~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||....    ..............+..+.. ++.++.+++.+||..||.+||++.+++.  +.|+.
T Consensus       193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~--~~~~~  261 (265)
T cd06605         193 ATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE--HPFIK  261 (265)
T ss_pred             HhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh--Cchhh
Confidence            99999987542    22222233333444455555 8899999999999999999999999998  56553

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.91  E-value=3.8e-24  Score=160.50  Aligned_cols=130  Identities=32%  Similarity=0.613  Sum_probs=101.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++......  ......+..|++||.+.+        ..++.++|+||+|+++|++
T Consensus       122 ~H~dl~p~nili~~~-~~~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~--------~~~~~~~Dv~slG~~l~el  190 (254)
T cd05083         122 VHRDLAARNILVSED-GVAKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKH--------KKFSSKSDVWSYGVLLWEV  190 (254)
T ss_pred             eccccCcceEEEcCC-CcEEECCCccceecccc--CCCCCCCceecCHHHhcc--------CCcCchhhHHHHHHHHHHH
Confidence            699999999999976 67999999998753321  122334568999998743        5678899999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ++ |..||........ ............+..+++.+.+++.+||..+|.+||+++++++.|+
T Consensus       191 ~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         191 FSYGRAPYPKMSLKEV-KECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             HhCCCCCCccCCHHHH-HHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence            97 9999987654332 2233333444556678899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.91  E-value=1.6e-24  Score=163.51  Aligned_cols=130  Identities=33%  Similarity=0.571  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-------cccccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-------TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      +|+||||+||+++.+ +.+||+|||++.....       ........|+..|++||.+.+        ..++.++|+||+
T Consensus       124 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~Dv~sl  194 (265)
T cd06631         124 VHRDIKGNNVMLMPN-GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE--------SGYGRKSDIWSI  194 (265)
T ss_pred             ccCCcCHHhEEECCC-CeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcC--------CCCcchhhHHHH
Confidence            699999999999966 6899999999864321       111223467889999999853        457889999999


Q ss_pred             HHHHHHHHcCCCCCCCCCcHHHHHHHHHc-cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           74 GIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |+++|++++|..||............... ...+.++..++.++.+++.+||..+|.+||++.++++
T Consensus       195 G~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         195 GCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            99999999999999876654433322222 2344567778999999999999999999999999987

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.91  E-value=1.3e-24  Score=170.60  Aligned_cols=135  Identities=24%  Similarity=0.383  Sum_probs=100.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||+++............++..|+|||.+.+        ..++.++|+||+||++|+|
T Consensus       140 ~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~~l~~l  210 (353)
T cd07850         140 IHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEM  210 (353)
T ss_pred             eeCCCCHHHEEECCC-CCEEEccCccceeCCCCCCCCCCcccccccCHHHHhC--------CCCCCchhhHhHHHHHHHH
Confidence            699999999999976 6799999999986544333344568889999998753        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccC--------------------CCC--------------C-------CCCCcHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHA--------------------RPG--------------L-------PEDISPDLAFI  119 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~~--------------~-------p~~~~~~~~~l  119 (198)
                      ++|+.||.................                    .+.              .       +...+..+.++
T Consensus       211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  290 (353)
T cd07850         211 IRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDL  290 (353)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHH
Confidence            999999976553221111000000                    000              0       11235678999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          120 VQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       120 ~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +.+||..||.+||++.++++  +.|+.
T Consensus       291 i~~~L~~dP~~R~t~~eiL~--~~~~~  315 (353)
T cd07850         291 LSKMLVIDPEKRISVDDALQ--HPYIN  315 (353)
T ss_pred             HHHHcCCChhhCcCHHHHhc--ChhHh
Confidence            99999999999999999998  66664

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=2.8e-24  Score=163.88  Aligned_cols=144  Identities=24%  Similarity=0.454  Sum_probs=107.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++...... ......++..|++||.+.+....  ....++.++|+||+||++|++
T Consensus       125 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~--~~~~~~~~~DiwslG~il~~l  200 (286)
T cd06622         125 IHRDVKPTNVLVNGN-GQVKLCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPN--QNPTYTVQSDVWSLGLSILEM  200 (286)
T ss_pred             eeCCCCHHHEEECCC-CCEEEeecCCcccccCC-ccccCCCccCccCcchhcCCCCC--ccCCCCcccchHhHHHHHHHH
Confidence            699999999999976 67999999998754322 22345688899999987531110  113457899999999999999


Q ss_pred             HcCCCCCCCCCcHHH--HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           81 LTNRLPFEGMSNLQA--AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ++|..||........  ..........+.++..+++++.+++.+||..+|.+||++.+++.  +.|+.....
T Consensus       201 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~--~~~~~~~~~  270 (286)
T cd06622         201 ALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE--HPWLVKYKN  270 (286)
T ss_pred             HhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc--ChhhhhccC
Confidence            999999976443221  11222334455667779999999999999999999999999998  677655443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.91  E-value=7.1e-25  Score=173.19  Aligned_cols=136  Identities=26%  Similarity=0.378  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++......  .....+||+.|+|||++...    .....++.++|+||+||++|
T Consensus       164 vHrDLkp~NIll~~~-~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~~~~DiwSlGvily  238 (371)
T cd05622         164 IHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ----GGDGYYGRECDWWSVGVFLY  238 (371)
T ss_pred             EeCCCCHHHEEECCC-CCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhcc----CCCccCCCccceeehhHHHH
Confidence            699999999999976 789999999997543221  12356799999999997531    01134788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCC--CCCHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNL--RPSFSQIIRML  141 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~~l  141 (198)
                      ||++|..||.+..................+|  ..++..+.+++.+||..++.+  |+++.+++++.
T Consensus       239 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         239 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            9999999998765433322222222222333  358999999999999844432  67999999843

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.91  E-value=2.5e-24  Score=163.67  Aligned_cols=130  Identities=25%  Similarity=0.308  Sum_probs=97.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.  +.+||+|||++.............++..|++||++..       ...++.++|+||+||++|||
T Consensus       122 ~H~dl~p~ni~l~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slGv~l~el  192 (282)
T cd07831         122 FHRDIKPENILIKD--DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLT-------DGYYGPKMDIWAVGCVFFEI  192 (282)
T ss_pred             eecccCHHHEEEcC--CCeEEEecccccccccCCCcCCCCCCcccCChhHhhc-------CCCCCcchhHHHHHHHHHHH
Confidence            69999999999996  6799999999976544333344567889999997643       24567899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHH--cc--------------CCCCC-----------CCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAF--KH--------------ARPGL-----------PEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~--~~--------------~~~~~-----------p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ++|..||.+............  ..              .....           ...++..+.+++.+||..+|++||+
T Consensus       193 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  272 (282)
T cd07831         193 LSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT  272 (282)
T ss_pred             HcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC
Confidence            999999987654332111100  00              00011           1245789999999999999999999


Q ss_pred             HHHHHH
Q 029154          134 FSQIIR  139 (198)
Q Consensus       134 ~~~~l~  139 (198)
                      ++++++
T Consensus       273 ~~~~l~  278 (282)
T cd07831         273 AKQALR  278 (282)
T ss_pred             HHHHhh
Confidence            999988

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=1.2e-24  Score=175.59  Aligned_cols=134  Identities=22%  Similarity=0.302  Sum_probs=94.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......||..|++||++.+        ..++.++|||||||++
T Consensus       282 vHrDLKP~NILl~~~-~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--------~~~~~~sDvwSlGviL  352 (461)
T PHA03211        282 IHRDIKTENVLVNGP-EDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG--------DPYTPSVDIWSAGLVI  352 (461)
T ss_pred             EECcCCHHHEEECCC-CCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC--------CCCCchHHHHHHHHHH
Confidence            699999999999976 679999999997543211   1223569999999999853        5688999999999999


Q ss_pred             HHHHcCCCCCCCCCc-------HHHHHHHHHccC--CCCC--------------------------C-----CCCcHHHH
Q 029154           78 WELLTNRLPFEGMSN-------LQAAYAAAFKHA--RPGL--------------------------P-----EDISPDLA  117 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~-------~~~~~~~~~~~~--~~~~--------------------------p-----~~~~~~~~  117 (198)
                      |||++|..++.....       ............  ...+                          +     ..++.++.
T Consensus       353 ~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (461)
T PHA03211        353 FEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVE  432 (461)
T ss_pred             HHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHH
Confidence            999987755432110       011111111000  0000                          0     13456889


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154          118 FIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus       118 ~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      +|+.+||..||.+|||+.|+|+  +.|+
T Consensus       433 dli~~mL~~DP~~RPsa~elL~--hp~f  458 (461)
T PHA03211        433 YLVCRALTFDGARRPSAAELLR--LPLF  458 (461)
T ss_pred             HHHHHHcccChhhCcCHHHHhh--Cccc
Confidence            9999999999999999999999  5554

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.91  E-value=2.9e-24  Score=164.35  Aligned_cols=142  Identities=28%  Similarity=0.474  Sum_probs=103.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++...... .......++..|++||.+.+...   ....++.++|+|||||++|+
T Consensus       132 ~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~~~~~~Dv~slG~il~e  207 (292)
T cd06644         132 IHRDLKAGNVLLTLD-GDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETM---KDTPYDYKADIWSLGITLIE  207 (292)
T ss_pred             eecCCCcceEEEcCC-CCEEEccCccceeccccccccceecCCccccCceeeccccc---cCCCCCchhhhHhHHHHHHH
Confidence            699999999999866 67999999998643222 11233467889999998743110   12446789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +++|..||......... ........+  ..+..++.++.+++.+||..+|++||++.++++  +.++....
T Consensus       208 l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--~~~~~~~~  276 (292)
T cd06644         208 MAQIEPPHHELNPMRVL-LKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE--HPFVSSVT  276 (292)
T ss_pred             HhcCCCCCccccHHHHH-HHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc--Cccccccc
Confidence            99999999765543322 222222222  335567889999999999999999999999998  66654433

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.91  E-value=6.1e-25  Score=165.52  Aligned_cols=131  Identities=33%  Similarity=0.647  Sum_probs=100.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      ||+||+++||+++.+ +.+||+|||++......   .......+...|++||.+..        ..++.++||||||+++
T Consensus       125 iH~~l~~~nill~~~-~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~ksDVysfG~~l  195 (259)
T PF07714_consen  125 IHGNLSPSNILLDSN-GQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKD--------GEYTKKSDVYSFGMLL  195 (259)
T ss_dssp             EEST-SGGGEEEETT-TEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHH--------SEESHHHHHHHHHHHH
T ss_pred             ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc--------cccccccccccccccc
Confidence            699999999999976 68999999998755211   11223456778999999854        4478999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ||+++ |..||....... .............+..++..+.+++.+||..||.+||++.++++.|
T Consensus       196 ~ei~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  196 YEILTLGKFPFSDYDNEE-IIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHTTSSGTTTTSCHHH-HHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cccccccccccccccccc-ccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            99999 678998775433 3334455555667788999999999999999999999999999865

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.91  E-value=2e-24  Score=164.52  Aligned_cols=131  Identities=26%  Similarity=0.385  Sum_probs=96.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++...... .......++..|+|||++.+       ...++.++|+||+|+++|+
T Consensus       123 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slG~il~~  194 (285)
T cd07861         123 LHRDLKPQNLLIDNK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLG-------SPRYSTPVDIWSIGTIFAE  194 (285)
T ss_pred             eecCCCHHHEEEcCC-CcEEECcccceeecCCCcccccCCcccccccChHHhcC-------CCCcCcHHHHHHHHHHHHH
Confidence            699999999999976 68999999998744322 12233467889999998753       2456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC----------------C-----------CCCCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA----------------R-----------PGLPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~----------------~-----------~~~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      +++|+.||.+...............                .           ......+++++.+++.+||..||.+||
T Consensus       195 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp  274 (285)
T cd07861         195 MATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRI  274 (285)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCC
Confidence            9999999987554332221110000                0           001234688999999999999999999


Q ss_pred             CHHHHHH
Q 029154          133 SFSQIIR  139 (198)
Q Consensus       133 s~~~~l~  139 (198)
                      |+.+++.
T Consensus       275 t~~~ll~  281 (285)
T cd07861         275 SAKKALN  281 (285)
T ss_pred             CHHHHhc
Confidence            9999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.91  E-value=3.3e-24  Score=163.46  Aligned_cols=135  Identities=22%  Similarity=0.401  Sum_probs=99.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+||+++.+ +.+||+|||+++......    ......++..|+|||.+.+        ..++.++|+||+|++
T Consensus       131 ~H~dlkp~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~--------~~~~~~~Di~slG~i  201 (284)
T cd05079         131 VHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ--------SKFYIASDVWSFGVT  201 (284)
T ss_pred             eecccchheEEEcCC-CCEEECCCccccccccCccceeecCCCCCCccccCHHHhcc--------CCCCccccchhhhhh
Confidence            699999999999976 679999999987543221    1123456778999998743        457889999999999


Q ss_pred             HHHHHcCCCCCCCC--------------CcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           77 LWELLTNRLPFEGM--------------SNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        77 l~e~~~g~~p~~~~--------------~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +|+++++..|....              ................+.+..++..+.+|+.+||..+|.+||++.++++.|+
T Consensus       202 l~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  281 (284)
T cd05079         202 LYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFE  281 (284)
T ss_pred             hhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence            99999976553211              1111111122223334456678999999999999999999999999999887


Q ss_pred             HH
Q 029154          143 AF  144 (198)
Q Consensus       143 ~~  144 (198)
                      .+
T Consensus       282 ~~  283 (284)
T cd05079         282 AI  283 (284)
T ss_pred             hh
Confidence            65

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.91  E-value=4.7e-24  Score=163.54  Aligned_cols=133  Identities=26%  Similarity=0.453  Sum_probs=97.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+|||++.+ +.++|+|||+++.......   .....++..|++||...+        +.++.++|+|||||++
T Consensus       152 ~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~DiwSlG~~l  222 (296)
T cd05095         152 VHRDLATRNCLVGKN-YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL--------GKFTTASDVWAFGVTL  222 (296)
T ss_pred             ecccCChheEEEcCC-CCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc--------CCccchhhhhHHHHHH
Confidence            699999999999866 6799999999875422211   112334678999997643        5678899999999999


Q ss_pred             HHHHc--CCCCCCCCCcHHHHHHHH------HccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT--NRLPFEGMSNLQAAYAAA------FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~--g~~p~~~~~~~~~~~~~~------~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||+++  |..||.............      ......+.+..+++.+.+++.+||..||.+||++.++++.|+
T Consensus       223 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         223 WEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            99997  678887654322211110      011112334567899999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.91  E-value=2.1e-24  Score=165.82  Aligned_cols=139  Identities=22%  Similarity=0.335  Sum_probs=101.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++...... .......++..|++||++.+       ...++.++|+||+|+++|+
T Consensus       126 ~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-------~~~~~~~~Dv~slG~~l~e  197 (301)
T cd07873         126 LHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLG-------STDYSTQIDMWGVGCIFYE  197 (301)
T ss_pred             eCCCCCHHHEEECCC-CcEEECcCcchhccCCCCCcccccceeecccCcHHHhC-------CCCCccHHHHHHHHHHHHH
Confidence            699999999999976 67999999998753322 12233467889999998753       2456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-----------------CCCCC-----------CCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-----------------ARPGL-----------PEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-----------------~~~~~-----------p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|..||.+..............                 .....           ...+++++.+++.+||..||.+|
T Consensus       198 l~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R  277 (301)
T cd07873         198 MSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKR  277 (301)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccC
Confidence            999999998765432221111000                 00001           12467889999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcC
Q 029154          132 PSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~  149 (198)
                      ||++++++  +.|+..+.
T Consensus       278 ~t~~eil~--h~~f~~~~  293 (301)
T cd07873         278 ISAEEAMK--HPYFHCLG  293 (301)
T ss_pred             cCHHHHhc--Cccccccc
Confidence            99999999  66665444

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.91  E-value=1.4e-24  Score=165.19  Aligned_cols=135  Identities=24%  Similarity=0.397  Sum_probs=102.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.++|+|||++....... .....|+..|++||.+..       ...++.++|+||+||++|++
T Consensus       119 vH~dikp~Nil~~~~-~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~~l~~l  189 (279)
T cd05633         119 VYRDLKPANILLDEH-GHVRISDLGLACDFSKKK-PHASVGTHGYMAPEVLQK-------GTAYDSSADWFSLGCMLFKL  189 (279)
T ss_pred             CCCCCCHHHEEECCC-CCEEEccCCcceeccccC-ccCcCCCcCccCHHHhcC-------CCCCCchhhhHHHHHHHHHH
Confidence            699999999999966 679999999986443221 223568999999998742       24578899999999999999


Q ss_pred             HcCCCCCCCCCcHH-HHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQ-AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      ++|..||....... .............++..+++++.+++.+||..||++|+     +++++++  +.|+.
T Consensus       190 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~--h~~~~  259 (279)
T cd05633         190 LRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE--HVFFK  259 (279)
T ss_pred             HhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh--Ccccc
Confidence            99999996543211 11222222344566778899999999999999999999     5999988  44443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.1e-24  Score=162.33  Aligned_cols=133  Identities=30%  Similarity=0.492  Sum_probs=99.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......++..|++||.+...     ....++.++|+||+|+++|+
T Consensus       123 ~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~-----~~~~~~~~~Di~slG~~l~~  196 (262)
T cd06613         123 IHRDIKGANILLTED-GDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVE-----RKGGYDGKCDIWALGITAIE  196 (262)
T ss_pred             eecCCChhhEEECCC-CCEEECccccchhhhhhhhccccccCCccccCchhhccc-----ccCCcCchhhhHHHHHHHHH
Confidence            699999999999976 679999999987543221 22345688899999987531     01257889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC---CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP---GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |++|..||..................+   ..+..++.++.+++.+||..+|.+||++++++.
T Consensus       197 ~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         197 LAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999999998766444433322221121   123345788999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.91  E-value=3.2e-24  Score=160.93  Aligned_cols=131  Identities=25%  Similarity=0.529  Sum_probs=104.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.............|+..|++||.+..       ...++.++|+||+|+++|++
T Consensus       124 ~H~dl~~~ni~~~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-------~~~~~~~~D~~slG~~l~~l  195 (258)
T cd06632         124 VHRDIKGANILVDTN-GVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQ-------QGGYGLAADIWSLGCTVLEM  195 (258)
T ss_pred             ccCCCCHHHEEECCC-CCEEEccCccceeccccccccccCCCcceeCHHHhcC-------CCCCCchhhhHHHHHHHHHH
Confidence            699999999999976 6799999999875443333345678899999998743       12378899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|..||..................+..+..+++++.+++.+||..+|.+||++.+++.
T Consensus       196 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         196 ATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            99999997665444333333223445567778999999999999999999999999987

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=5e-25  Score=174.41  Aligned_cols=133  Identities=22%  Similarity=0.369  Sum_probs=97.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----------------------------------------------
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----------------------------------------------   34 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----------------------------------------------   34 (198)
                      |||||||+|||++.+ +.+||+|||+++......                                              
T Consensus       123 vHrDlkp~NIll~~~-~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (377)
T cd05629         123 IHRDIKPDNILIDRG-GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNR  201 (377)
T ss_pred             eccCCCHHHEEECCC-CCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence            699999999999976 689999999985211000                                              


Q ss_pred             --cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC--
Q 029154           35 --MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--  110 (198)
Q Consensus        35 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--  110 (198)
                        .....+||+.|+|||++.+        ..++.++|+||+||++|||++|..||.+..................+|.  
T Consensus       202 ~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~  273 (377)
T cd05629         202 RLMAYSTVGTPDYIAPEIFLQ--------QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDI  273 (377)
T ss_pred             cccccccCCCccccCHHHHcc--------CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCC
Confidence              0012468999999999853        5678999999999999999999999987664332222221122233343  


Q ss_pred             CCcHHHHHHHHHhcccCCCCC---CCHHHHHHHHHHHH
Q 029154          111 DISPDLAFIVQSCWVEDPNLR---PSFSQIIRMLNAFL  145 (198)
Q Consensus       111 ~~~~~~~~l~~~~l~~dp~~R---ps~~~~l~~l~~~~  145 (198)
                      .++.++.+++.+||. +|.+|   +++.+++.  +.|+
T Consensus       274 ~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~--hp~~  308 (377)
T cd05629         274 HLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS--HPFF  308 (377)
T ss_pred             CCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc--CCCc
Confidence            478999999999997 67765   59999988  5444

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.91  E-value=7.9e-25  Score=179.97  Aligned_cols=134  Identities=22%  Similarity=0.373  Sum_probs=102.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cc------c---CCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MM------T---AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~------~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      ||||||-|||||..+ ++.||||||.+....... ..      .   ...-|+.|.+||.+.-     +.+...+.|+||
T Consensus       168 IHRDLKiENvLls~~-g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDl-----ysg~pI~eKsDI  241 (738)
T KOG1989|consen  168 IHRDLKIENVLLSAD-GNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDL-----YSGLPIGEKSDI  241 (738)
T ss_pred             chhhhhhhheEEcCC-CCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhh-----hcCCCCcchhHH
Confidence            899999999999977 689999999886321111 00      0   0135889999999864     235678999999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |+|||++|.++....||........      ......+|  +.++..+.+||+.||+.||.+||++-+++..+-.+..
T Consensus       242 WALGclLYkLCy~t~PFe~sg~laI------lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  242 WALGCLLYKLCYFTTPFEESGKLAI------LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             HHHHHHHHHHHHhCCCcCcCcceeE------EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence            9999999999999999986543221      12222333  4588999999999999999999999999998766543

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.91  E-value=4.5e-24  Score=161.02  Aligned_cols=128  Identities=25%  Similarity=0.408  Sum_probs=94.1

Q ss_pred             CCCCCCCCCeEEcCCCC------ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK------SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~------~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      |||||||+|||++.++.      .+|++|||++......   ....++..|+|||.+..       ...++.++||||||
T Consensus       127 vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG  196 (262)
T cd05077         127 VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVED-------SKNLSIAADKWSFG  196 (262)
T ss_pred             ECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcC-------CCCCCchhHHHHHH
Confidence            69999999999975531      2899999998644321   23467889999998742       35678899999999


Q ss_pred             HHHHHHH-cCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           75 IVLWELL-TNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        75 ~~l~e~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +++||++ .|..||.........  ... ..........+.++.+++.+||..||.+||++.++++.+
T Consensus       197 ~~l~el~~~~~~p~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         197 TTLWEICYNGEIPLKDKTLAEKE--RFY-EGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHHHHHHhCCCCCCCCcchhHHH--HHH-hcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            9999997 588888754432211  111 111222333567899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.91  E-value=5.3e-24  Score=161.00  Aligned_cols=134  Identities=31%  Similarity=0.554  Sum_probs=101.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCC---CccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAET---GTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~---gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      +|+||||+||+++.+ ..+||+|||++........   .....   .+..|++||.+.+        ..++.++|+||+|
T Consensus       128 ~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~DvwslG  198 (269)
T cd05065         128 VHRDLAARNILVNSN-LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY--------RKFTSASDVWSYG  198 (269)
T ss_pred             eecccChheEEEcCC-CcEEECCCccccccccCccccccccccCCCcceeecCHhHhcc--------CcccchhhhhhhH
Confidence            699999999999866 6799999999874432111   11111   2457999998753        5678899999999


Q ss_pred             HHHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           75 IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        75 ~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +++||+++ |..||........ ..........+.+..++..+.+++.+||..+|++||++.+++..|+.+
T Consensus       199 ~~l~e~l~~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         199 IVMWEVMSYGERPYWDMSNQDV-INAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHhcCCCCCCCCCCHHHH-HHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999886 9999977554332 222233334455667889999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.91  E-value=1.4e-24  Score=166.60  Aligned_cols=140  Identities=31%  Similarity=0.490  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.++|+|||++....... ......++..|++||.+.+        ..++.++|+||+|+++|+
T Consensus       137 ~H~dL~p~Nili~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slGvil~~  207 (297)
T cd06656         137 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--------KAYGPKVDIWSLGIMAIE  207 (297)
T ss_pred             ccCCCCHHHEEECCC-CCEEECcCccceEccCCccCcCcccCCccccCHHHHcC--------CCCCcHHHHHHHHHHHHH
Confidence            699999999999966 679999999987543222 1233468889999998753        557889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHH-ccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAF-KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      +++|..||.+............ .......+..++..+.+++.+||..+|.+||++.++++  +.|+....+.
T Consensus       208 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~--~~~~~~~~~~  278 (297)
T cd06656         208 MVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ--HPFLKLAKPL  278 (297)
T ss_pred             HHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc--Cchhcccccc
Confidence            9999999976554332221111 11122345668889999999999999999999999999  7776655444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=8.9e-24  Score=160.64  Aligned_cols=136  Identities=28%  Similarity=0.532  Sum_probs=105.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||+++........   ....++..|++||.+.        ...++.++|+||||+++
T Consensus       131 ~H~di~p~nil~~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~--------~~~~~~~~Di~slG~~l  201 (279)
T cd05057         131 VHRDLAARNVLVKTP-QHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL--------HRIYTHKSDVWSYGVTV  201 (279)
T ss_pred             EecccCcceEEEcCC-CeEEECCCcccccccCcccceecCCCcccccccCHHHhh--------cCCcCchhhHHHHHHHH
Confidence            699999999999866 67999999999754322211   1122356799999874        35678899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||.+..... .............|...+.++.+++.+||..||.+||++.++++.|..+..
T Consensus       202 ~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         202 WELMTFGAKPYEGIPAVE-IPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHHhcCCCCCCCCCCHHH-HHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            99998 999998765432 233333444556677788999999999999999999999999999988744

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.91  E-value=2.4e-24  Score=164.03  Aligned_cols=131  Identities=25%  Similarity=0.367  Sum_probs=94.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||+++..... .......++..|+|||++.+       ...++.++|+||+||++|+
T Consensus       121 ~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~  192 (284)
T cd07839         121 LHRDLKPQNLLINKN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-------AKLYSTSIDMWSAGCIFAE  192 (284)
T ss_pred             ecCCCCHHHEEEcCC-CcEEECccchhhccCCCCCCcCCCccccCCcChHHHhC-------CcccCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998744322 22334567889999998753       2456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC-------------------CC---------CCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA-------------------RP---------GLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~-------------------~~---------~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|..|+.................                   .+         .....+++++.+++.+||..||.+|
T Consensus       193 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  272 (284)
T cd07839         193 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQR  272 (284)
T ss_pred             HHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhc
Confidence            9999888644333222211111000                   00         0112367889999999999999999


Q ss_pred             CCHHHHHH
Q 029154          132 PSFSQIIR  139 (198)
Q Consensus       132 ps~~~~l~  139 (198)
                      ||++++++
T Consensus       273 ~t~~~il~  280 (284)
T cd07839         273 ISAEEALQ  280 (284)
T ss_pred             CCHHHHhc
Confidence            99999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.91  E-value=7.2e-24  Score=159.57  Aligned_cols=133  Identities=34%  Similarity=0.569  Sum_probs=103.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||++........  .....++..|++||.+..        ..++.++|+||||+++|
T Consensus       124 ~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~slG~~l~  194 (260)
T cd05073         124 IHRDLRAANILVSAS-LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF--------GSFTIKSDVWSFGILLM  194 (260)
T ss_pred             cccccCcceEEEcCC-CcEEECCCcceeeccCCCcccccCCcccccccCHhHhcc--------CCcCccccchHHHHHHH
Confidence            699999999999966 6899999999864432211  112345677999998753        55788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++++ |..||.+...... ............+...+.++.+++.+||..+|++||++.++++.|+.
T Consensus       195 ~l~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         195 EIVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHhcCCCCCCCCCHHHH-HHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9998 8999987654322 22333344445566788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.91  E-value=1.8e-24  Score=162.13  Aligned_cols=130  Identities=34%  Similarity=0.551  Sum_probs=99.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.+||+|||++....... ......++..|++||.+.+        ..++.++|+||||+++|+
T Consensus       121 ~H~dl~~~ni~~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~s~G~il~~  191 (256)
T cd06612         121 IHRDIKAGNILLNEE-GQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQE--------IGYNNKADIWSLGITAIE  191 (256)
T ss_pred             ccCCCCcceEEECCC-CcEEEcccccchhcccCccccccccCCccccCHHHHhc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 679999999987544322 2233457889999998753        467889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHc-cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||............... ......+..++.++.+++.+||..||.+||++.++++
T Consensus       192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         192 MAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            99999999865543332221111 1111234457789999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.91  E-value=4.3e-24  Score=181.09  Aligned_cols=140  Identities=23%  Similarity=0.318  Sum_probs=102.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-------------------ccccCCCCccceeccccccccccccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-------------------EMMTAETGTYRWMAPELYSTVTLRQGEK   61 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~   61 (198)
                      |||||||+|||++.+ +.+||+|||+++.....                   ......+||+.|+|||++.+        
T Consensus       135 IHRDLKPeNILLd~d-g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g--------  205 (932)
T PRK13184        135 LHRDLKPDNILLGLF-GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG--------  205 (932)
T ss_pred             cccCCchheEEEcCC-CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC--------
Confidence            799999999999976 67999999999743100                   00112468999999998753        


Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccCCCCCC-CHHHHHH
Q 029154           62 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRP-SFSQIIR  139 (198)
Q Consensus        62 ~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~dp~~Rp-s~~~~l~  139 (198)
                      ..++.++|+||+||++|||++|..||.................. ......+++.+.+++.+||..||.+|+ +++++++
T Consensus       206 ~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~  285 (932)
T PRK13184        206 VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ  285 (932)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            56789999999999999999999999764432222211111111 111235788999999999999999995 6788888


Q ss_pred             HHHHHHhhcC
Q 029154          140 MLNAFLFTLR  149 (198)
Q Consensus       140 ~l~~~~~~~~  149 (198)
                      .|+.++....
T Consensus       286 ~Le~~lq~~p  295 (932)
T PRK13184        286 DLEPHLQGSP  295 (932)
T ss_pred             HHHHHHhcCc
Confidence            8888876543

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.91  E-value=8.9e-24  Score=158.55  Aligned_cols=131  Identities=30%  Similarity=0.559  Sum_probs=99.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||+++.......  .....++..|++||.+.+        ..++.++|+||+|+++|
T Consensus       122 ~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~--------~~~~~~~Dv~slG~~l~  192 (256)
T cd05112         122 IHRDLAARNCLVGEN-QVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF--------SKYSSKSDVWSFGVLMW  192 (256)
T ss_pred             cccccccceEEEcCC-CeEEECCCcceeecccCcccccCCCccchhhcCHhHhcc--------CCcChHHHHHHHHHHHH
Confidence            699999999999866 6799999999874432211  112234578999998753        55788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |+++ |..||....... .............+...+..+.+++.+||..+|++||++.+++++|
T Consensus       193 el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         193 EVFSEGKTPYENRSNSE-VVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHcCCCCCCCcCCHHH-HHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            9998 899997655322 2222233334444566789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.91  E-value=2.6e-24  Score=163.64  Aligned_cols=134  Identities=25%  Similarity=0.474  Sum_probs=100.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+|||++.+ +.+||+|||++...... .....+|+..|++||++.+        ..++.++|+||+|+++|++
T Consensus       117 ~H~dlkp~Nill~~~-~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~~l~~l  186 (279)
T cd06619         117 LHRDVKPSNMLVNTR-GQVKLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISG--------EQYGIHSDVWSLGISFMEL  186 (279)
T ss_pred             eeCCCCHHHEEECCC-CCEEEeeCCcceecccc-cccCCCCChhhcCceeecC--------CCCCCcchHHHHHHHHHHH
Confidence            699999999999976 67999999998754322 2334578999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHH------HHHHHHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQ------AAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~------~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||.......      ...........+.. ....++++.+++.+||..+|.+||++.++++  +.|+.
T Consensus       187 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~--~~~~~  257 (279)
T cd06619         187 ALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD--HPFIV  257 (279)
T ss_pred             HhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc--Ccccc
Confidence            99999986432111      11111111222222 2347889999999999999999999999998  55543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.91  E-value=7.8e-24  Score=159.99  Aligned_cols=134  Identities=30%  Similarity=0.549  Sum_probs=102.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--c--cCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--M--TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+ +.++|+|||++........  .  ....++..|++||.+.+        ..++.++|+||||++
T Consensus       128 ~h~dlkp~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--------~~~~~~~Dv~slG~~  198 (267)
T cd05066         128 VHRDLAARNILVNSN-LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY--------RKFTSASDVWSYGIV  198 (267)
T ss_pred             eehhhchhcEEECCC-CeEEeCCCCcccccccccceeeecCCCccceeecCHhHhcc--------CccCchhhhHHHHHH
Confidence            699999999999876 6799999999975432211  1  11223568999998853        567899999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      +|++++ |..||........ ..........+.+..+++.+.+++.+||..+|.+||++.++++.|..+
T Consensus       199 l~ell~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         199 MWEVMSYGERPYWEMSNQDV-IKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHhcCCCCCcccCCHHHH-HHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            999886 9999977654332 233333344455566889999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.91  E-value=1.3e-24  Score=164.11  Aligned_cols=135  Identities=28%  Similarity=0.418  Sum_probs=97.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++....... ......|+..|++||.+...     ....++.++|+||+|+++||
T Consensus       128 ~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~~~Dvws~G~il~e  201 (267)
T cd06646         128 MHRDIKGANILLTDN-GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVE-----KNGGYNQLCDIWAVGITAIE  201 (267)
T ss_pred             cccCCCHHHEEECCC-CCEEECcCccceeecccccccCccccCccccCHhHcccc-----cCCCCcchhhHHHHHHHHHH
Confidence            699999999999866 679999999987543221 12335688899999986421     12446789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC---CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |++|..||..................+.   ....++..+.+++.+||..+|++||++++++++|
T Consensus       202 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         202 LAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            9999999865543322211111111111   1234678999999999999999999999998743

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.91  E-value=5.9e-24  Score=163.82  Aligned_cols=134  Identities=34%  Similarity=0.556  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||+|+||+++.+ +.+||+|||++......   ....++..|++||++.+.     ....++.++|+||||+++|++
T Consensus       137 ~H~dl~p~nIl~~~~-~~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~-----~~~~~~~~sDv~s~G~il~el  207 (307)
T cd06607         137 IHRDIKAGNILLTEP-GTVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAM-----DEGQYDGKVDVWSLGITCIEL  207 (307)
T ss_pred             eecCCCcccEEECCC-CCEEEeecCcceecCCC---CCccCCccccCceeeecc-----CCCCCCcccchHHHHHHHHHH
Confidence            699999999999976 67999999998654322   245678899999987421     124578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||.+........... ....+.. +..++..+.+++.+||..+|.+||++.+++.  +.|+.
T Consensus       208 ~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--~~~~~  271 (307)
T cd06607         208 AERKPPLFNMNAMSALYHIA-QNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK--HRFVL  271 (307)
T ss_pred             HcCCCCCCCccHHHHHHHHh-cCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc--Chhhc
Confidence            99999998766544333322 2222222 3447889999999999999999999999998  45544

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.91  E-value=2.8e-25  Score=175.76  Aligned_cols=134  Identities=22%  Similarity=0.335  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--------------------------------------------ccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--------------------------------------------EMM   36 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--------------------------------------------~~~   36 (198)
                      |||||||+|||++.+ +.+||+|||++......                                            ...
T Consensus       123 vHrDlkp~Nill~~~-~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (376)
T cd05598         123 IHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLA  201 (376)
T ss_pred             EeCCCCHHHEEECCC-CCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccc
Confidence            699999999999976 67999999997421100                                            001


Q ss_pred             cCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcH
Q 029154           37 TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISP  114 (198)
Q Consensus        37 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~  114 (198)
                      ...+||+.|+|||++.+        ..++.++||||+||++|||++|..||.+...................  ...+++
T Consensus       202 ~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  273 (376)
T cd05598         202 HSLVGTPNYIAPEVLLR--------TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSR  273 (376)
T ss_pred             cccCCCccccCHHHHcC--------CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCH
Confidence            13479999999999853        56788999999999999999999999876654332222211112222  235789


Q ss_pred             HHHHHHHHhcccCCCCCC---CHHHHHHHHHHHHh
Q 029154          115 DLAFIVQSCWVEDPNLRP---SFSQIIRMLNAFLF  146 (198)
Q Consensus       115 ~~~~l~~~~l~~dp~~Rp---s~~~~l~~l~~~~~  146 (198)
                      ++.+++.+|+ .+|.+|+   ++.++++  +.|+.
T Consensus       274 ~~~~li~~l~-~~p~~R~~~~t~~ell~--h~~~~  305 (376)
T cd05598         274 EASDLILRLC-CGAEDRLGKNGADEIKA--HPFFK  305 (376)
T ss_pred             HHHHHHHHHh-cCHhhcCCCCCHHHHhC--CCCcC
Confidence            9999999976 5999999   8999988  55543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.91  E-value=7.7e-24  Score=160.16  Aligned_cols=138  Identities=26%  Similarity=0.441  Sum_probs=96.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||++........   .....++..|+|||++..... ......++.++|+||||+++
T Consensus       122 ~H~dlkp~nil~~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~~~DiwslG~~l  199 (269)
T cd05087         122 IHSDLALRNCLLTAD-LTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHG-NLLVVDQTKESNVWSLGVTI  199 (269)
T ss_pred             eccccCcceEEEcCC-CcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccc-cccccCCCccchhHHHHHHH
Confidence            699999999999976 6899999999874332211   122456788999998743100 00012357899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHc-cC---CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFK-HA---RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~-~~---~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ||+++ |..||............... ..   .+.+....++.+.+++.+|| .+|++||++++|+..|
T Consensus       200 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l  267 (269)
T cd05087         200 WELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL  267 (269)
T ss_pred             HHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence            99996 99999766544332222111 11   11222346788999999999 6899999999999866

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=7.8e-24  Score=159.29  Aligned_cols=133  Identities=31%  Similarity=0.529  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||++........  .....++..|++||.+.+        ..++.++|+||+|+++|
T Consensus       125 ~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~slG~il~  195 (261)
T cd05034         125 IHRDLAARNILVGEN-LVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANY--------GRFTIKSDVWSFGILLT  195 (261)
T ss_pred             ccCCcchheEEEcCC-CCEEECccccceeccchhhhhhhccCCCccccCHHHhcc--------CCcCchhHHHHHHHHHH
Confidence            699999999999977 6799999999875432211  112234568999998753        55788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ++++ |+.||.+..... .............+...+.++.+++.+||..+|.+||+++++.+.|+.
T Consensus       196 ~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         196 EIVTYGRVPYPGMTNRE-VLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            9998 999998765433 233333444455566778999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.91  E-value=7e-24  Score=158.94  Aligned_cols=131  Identities=34%  Similarity=0.668  Sum_probs=101.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc--CCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT--AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.++|+|||++..........  ...++..|++||.+.        ...++.++|+||+|++++
T Consensus       125 ~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~--------~~~~~~~~Di~slG~i~~  195 (258)
T smart00219      125 IHRDLAARNCLVGEN-LVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLK--------DGKFTSKSDVWSFGVLLW  195 (258)
T ss_pred             eecccccceEEEccC-CeEEEcccCCceecccccccccccCCCcccccChHHhc--------cCCCCcchhHHHHHHHHH
Confidence            699999999999976 679999999997544322211  123678899999874        256788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ++++ |..||..... ...............+..++.++.+++.+||..||.+|||+.++++.|
T Consensus       196 ~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      196 EIFTLGESPYPGMSN-EEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHhCCCCCCCCCCH-HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            9998 7888876443 233333344455566777899999999999999999999999998753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=5.5e-24  Score=161.67  Aligned_cols=133  Identities=30%  Similarity=0.544  Sum_probs=103.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.++|+|||++....... ......++..|++||.+.+        ..++.++|+||||+++|+
T Consensus       123 vH~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~--------~~~~~~~Dv~slG~il~e  193 (277)
T cd06640         123 IHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ--------SAYDSKADIWSLGITAIE  193 (277)
T ss_pred             cCcCCChhhEEEcCC-CCEEEcccccceeccCCccccccccCcccccCHhHhcc--------CCCccHHHHHHHHHHHHH
Confidence            699999999999976 679999999987543322 1223467889999998753        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |++|..||.......... .......+.++..++.++.+++.+||..+|.+||++.++++  +.++
T Consensus       194 l~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--~~~~  256 (277)
T cd06640         194 LAKGEPPNSDMHPMRVLF-LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK--HKFI  256 (277)
T ss_pred             HHHCCCCCCCcChHhHhh-hhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh--ChHh
Confidence            999999998766433322 22233345556678889999999999999999999999998  5554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.91  E-value=5.1e-25  Score=173.37  Aligned_cols=134  Identities=25%  Similarity=0.379  Sum_probs=97.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc------------------------------------cccCCCCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE------------------------------------MMTAETGTYR   44 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~------------------------------------~~~~~~gt~~   44 (198)
                      |||||||+|||++.+ +.+||+|||+++......                                    .....+||+.
T Consensus       123 vHrDLkp~NIli~~~-~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  201 (360)
T cd05627         123 IHRDIKPDNLLLDAK-GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD  201 (360)
T ss_pred             EccCCCHHHEEECCC-CCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcc
Confidence            699999999999976 789999999986322100                                    0113479999


Q ss_pred             eecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC--CCcHHHHHHHHH
Q 029154           45 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQS  122 (198)
Q Consensus        45 y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~l~~~  122 (198)
                      |+|||++.+        ..++.++|+||+||++|||++|..||.+...................|.  .+++++.+++.+
T Consensus       202 Y~APE~~~~--------~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  273 (360)
T cd05627         202 YIAPEVFMQ--------TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILR  273 (360)
T ss_pred             ccCHHHHcC--------CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHH
Confidence            999999853        5678999999999999999999999987665433222221112223333  378899999999


Q ss_pred             hcccCCCCCCC---HHHHHHHHHHHHh
Q 029154          123 CWVEDPNLRPS---FSQIIRMLNAFLF  146 (198)
Q Consensus       123 ~l~~dp~~Rps---~~~~l~~l~~~~~  146 (198)
                      ++ .||.+|++   +.++++  |.|+.
T Consensus       274 l~-~~p~~R~~~~~~~ei~~--hp~f~  297 (360)
T cd05627         274 FC-TDSENRIGSNGVEEIKS--HPFFE  297 (360)
T ss_pred             hc-cChhhcCCCCCHHHHhc--CCCCC
Confidence            77 49999985   677777  55543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=2.4e-24  Score=176.09  Aligned_cols=134  Identities=19%  Similarity=0.302  Sum_probs=94.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++......  .....+||..|++||++.+        ..++.++|||||||++|
T Consensus       289 iHrDLKP~NILl~~~-~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~  359 (501)
T PHA03210        289 IHRDIKLENIFLNCD-GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG--------DGYCEITDIWSCGLILL  359 (501)
T ss_pred             ecCCCCHHHEEECCC-CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC--------CCCCcHHHHHHHHHHHH
Confidence            799999999999976 679999999997543322  1223579999999999853        56889999999999999


Q ss_pred             HHHcCCC-CCCCCC-cHHHHHHHHHccC---CCCC----------------------------CCCCcHHHHHHHHHhcc
Q 029154           79 ELLTNRL-PFEGMS-NLQAAYAAAFKHA---RPGL----------------------------PEDISPDLAFIVQSCWV  125 (198)
Q Consensus        79 e~~~g~~-p~~~~~-~~~~~~~~~~~~~---~~~~----------------------------p~~~~~~~~~l~~~~l~  125 (198)
                      ||++|.. |+.... .............   ...+                            ...++.++.+++.+||.
T Consensus       360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~  439 (501)
T PHA03210        360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT  439 (501)
T ss_pred             HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence            9999875 443221 1111111111100   0000                            01245677888999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHH
Q 029154          126 EDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus       126 ~dp~~Rps~~~~l~~l~~~~  145 (198)
                      .||.+||++.|++.  +.|+
T Consensus       440 ~DP~~Rpsa~elL~--hp~f  457 (501)
T PHA03210        440 FDWHLRPGAAELLA--LPLF  457 (501)
T ss_pred             cCcccCcCHHHHhh--Chhh
Confidence            99999999999998  5554

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.91  E-value=3.8e-24  Score=161.55  Aligned_cols=133  Identities=29%  Similarity=0.443  Sum_probs=97.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......|+..|+|||++...     ....++.++|+||+||++|+
T Consensus       128 ~H~dlkp~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~~~DvwSlG~il~~  201 (267)
T cd06645         128 MHRDIKGANILLTDN-GHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE-----RKGGYNQLCDIWAVGITAIE  201 (267)
T ss_pred             ecCCCCHHHEEECCC-CCEEECcceeeeEccCcccccccccCcccccChhhhccc-----cCCCCCchhhhHHHHHHHHH
Confidence            699999999999976 679999999986433221 12345789999999986310     12457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC-C--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG-L--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||..................+. .  ...++..+.+++.+||..+|.+||+++++++
T Consensus       202 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         202 LAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            9999999876554333222211111111 1  1246788999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.91  E-value=4e-24  Score=161.36  Aligned_cols=129  Identities=29%  Similarity=0.514  Sum_probs=99.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.++|+|||+++.....    .......|+..|+|||.+.+        ..++.++|+||||++
T Consensus       128 ~H~dl~p~nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~i  198 (265)
T cd06652         128 VHRDIKGANILRDSV-GNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG--------EGYGRKADIWSVGCT  198 (265)
T ss_pred             ecCCCCHHHEEecCC-CCEEECcCccccccccccccccccccCCCCccccChhhhcC--------CCCCcchhHHHHHHH
Confidence            699999999999966 67999999998743211    11223468889999998753        457889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +|++++|+.||..................+..|...+..+.+++.+||. +|.+||+++++++
T Consensus       199 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         199 VVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            9999999999987654443333332333445566778889999999995 8999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.91  E-value=5.9e-24  Score=163.22  Aligned_cols=137  Identities=28%  Similarity=0.448  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......|+..|+|||++.+        ..++.++|+||||+++||
T Consensus       139 vH~dl~p~Nill~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~e  209 (297)
T cd06659         139 IHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR--------TPYGTEVDIWSLGIMVIE  209 (297)
T ss_pred             ecCCCCHHHeEEccC-CcEEEeechhHhhcccccccccceecCccccCHHHHcc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 679999999986433221 1233568899999998853        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC--CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA--RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +++|..||........... .....  ....+..++..+.+++.+||..+|.+||++.++++  +.++....
T Consensus       210 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~--~~~~~~~~  278 (297)
T cd06659         210 MVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD--HPFLLQTG  278 (297)
T ss_pred             HHhCCCCCCCCCHHHHHHH-HhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh--ChhhccCC
Confidence            9999999986654333222 11111  11223457889999999999999999999999999  55555333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=9.6e-24  Score=160.30  Aligned_cols=134  Identities=30%  Similarity=0.515  Sum_probs=103.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++....... ......|+..|++||.+.+        ..++.++|+||||+++||
T Consensus       123 vH~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~e  193 (277)
T cd06642         123 IHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--------SAYDFKADIWSLGITAIE  193 (277)
T ss_pred             eccCCChheEEEeCC-CCEEEccccccccccCcchhhhcccCcccccCHHHhCc--------CCCchhhhHHHHHHHHHH
Confidence            699999999999966 679999999987543322 1223467889999999853        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..|+.......... .......+..+..++.++.+++.+||..+|.+||++.++++  +.++.
T Consensus       194 l~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--~~~~~  257 (277)
T cd06642         194 LAKGEPPNSDLHPMRVLF-LIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK--HKFIT  257 (277)
T ss_pred             HHhCCCCCcccchhhHHh-hhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH--hHHHH
Confidence            999999987654332221 22223344455668889999999999999999999999999  55543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=7.4e-24  Score=158.98  Aligned_cols=130  Identities=28%  Similarity=0.429  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......++..|++||.+.+        ..++.++|+||+|+++|+
T Consensus       123 ~h~dl~p~ni~~~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~--------~~~~~~~Dv~slG~i~~~  193 (256)
T cd08221         123 LHRDIKTLNIFLTKA-GLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQG--------VKYNFKSDIWALGCVLYE  193 (256)
T ss_pred             cccCCChHhEEEeCC-CCEEECcCcceEEcccccccccccCCCccccCHhhcCC--------CCCCCcchhHHHHHHHHH
Confidence            699999999999976 679999999987543322 2334568999999998753        446788999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      |++|..||........... .........+..++.++.+++.+||..+|.+||++.+++++
T Consensus       194 l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         194 LLTLKRTFDATNPLNLVVK-IVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHCCCCCCCCCHHHHHHH-HHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            9999999987554333322 23333344456688999999999999999999999999884

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.91  E-value=8.3e-24  Score=159.95  Aligned_cols=138  Identities=28%  Similarity=0.481  Sum_probs=97.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....++..|+|||++...... .....++.++|+||+||++
T Consensus       122 vH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~~~DiwslG~~l  199 (269)
T cd05042         122 IHSDLALRNCQLTAD-LSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQD-LLPKDQTKKSNIWSLGVTM  199 (269)
T ss_pred             ecccccHhheEecCC-CcEEEeccccccccccchheeccCCCCCcccccCHHHHhhcccc-ccccccchhhHHHHHHHHH
Confidence            699999999999976 6799999999864322111   1223456789999986421000 0123567899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccC----CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHA----RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ||+++ |..||.................    .+..+..++..+..++..|| .||.+||++++|++.|
T Consensus       200 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         200 WELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             HHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            99998 7888877655443322222211    12234457888999999998 5999999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.91  E-value=4.6e-24  Score=162.60  Aligned_cols=135  Identities=27%  Similarity=0.462  Sum_probs=100.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||+++...... ......|+..|+|||++.....   ....++.++|+||+||++|+
T Consensus       146 ~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~~~~~~Dv~slGvi~~e  221 (286)
T cd06638         146 IHRDVKGNNILLTTE-GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ---LDSTYDARCDVWSLGITAIE  221 (286)
T ss_pred             cccCCCHHhEEECCC-CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhh---ccccccchhhhhhHHHHHHH
Confidence            699999999999976 679999999987543221 2234568999999998743110   12446889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC--CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA--RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      +++|..||........... .....  ....+..++.++.+++.+||..||++||++.+++++
T Consensus       222 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         222 LGDGDPPLADLHPMRALFK-IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HhcCCCCCCCCchhHHHhh-ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            9999999976654333221 11111  122345567899999999999999999999999983

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.91  E-value=1.1e-23  Score=164.08  Aligned_cols=140  Identities=26%  Similarity=0.369  Sum_probs=101.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +||||||+||+++.+ +.+||+|||+++......     ......|+..|++||.+.+       ...++.++|+||+|+
T Consensus       127 vH~dlkp~Nili~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~~Di~slGv  198 (332)
T cd07857         127 LHRDLKPGNLLVNAD-CELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLS-------FQSYTKAIDVWSVGC  198 (332)
T ss_pred             ccCCCCHHHeEEcCC-CCEEeCcCCCceecccccccccccccCcccCccccCcHHHhC-------CCCCCcHHHHHHHHH
Confidence            699999999999976 679999999987432211     1223468899999998643       245788999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHH-------------------------ccC-CCC---CCCCCcHHHHHHHHHhccc
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAF-------------------------KHA-RPG---LPEDISPDLAFIVQSCWVE  126 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~-------------------------~~~-~~~---~p~~~~~~~~~l~~~~l~~  126 (198)
                      ++|++++|..||.+............                         ... ...   .....+..+.+++.+||..
T Consensus       199 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  278 (332)
T cd07857         199 ILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAF  278 (332)
T ss_pred             HHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccC
Confidence            99999999999976542211100000                         000 000   1123578899999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHhhcCC
Q 029154          127 DPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       127 dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ||.+||++.+++.  +.|+.....
T Consensus       279 ~P~~R~t~~~ll~--~~~~~~~~~  300 (332)
T cd07857         279 DPTKRISVEEALE--HPYLAIWHD  300 (332)
T ss_pred             CcccCCCHHHHhc--ChhhhhhcC
Confidence            9999999999998  777765543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.91  E-value=5.2e-24  Score=162.53  Aligned_cols=137  Identities=30%  Similarity=0.498  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.++|+|||++....... ......|+..|++||.+.+        ..++.++|+||+|+++|+
T Consensus       137 ~H~dl~p~Nil~~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slGv~l~e  207 (285)
T cd06648         137 IHRDIKSDSILLTSD-GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISR--------LPYGTEVDIWSLGIMVIE  207 (285)
T ss_pred             ecCCCChhhEEEcCC-CcEEEcccccchhhccCCcccccccCCccccCHHHhcC--------CCCCCcccHHHHHHHHHH
Confidence            699999999999976 679999999876432211 1223468899999998753        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +++|..||......... ........+..  +..++..+.+++.+||..+|.+||++.++++  +.++....
T Consensus       208 ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~--~~~~~~~~  276 (285)
T cd06648         208 MVDGEPPYFNEPPLQAM-KRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN--HPFLAKAG  276 (285)
T ss_pred             HHhCCCCCcCCCHHHHH-HHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc--CcccccCC
Confidence            99999999765543332 22222222222  3337889999999999999999999999998  66665544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=2.3e-24  Score=173.90  Aligned_cols=129  Identities=29%  Similarity=0.575  Sum_probs=107.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccC----CCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTA----ETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||...|+|+... ..|||+|||+.|....+..+..    ..-...|.|||.+.        ...|+.++|+|+||++
T Consensus       234 vHRDLAARNlllasp-rtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLr--------h~kFShaSDvWmyGVT  304 (1039)
T KOG0199|consen  234 VHRDLAARNLLLASP-RTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLR--------HRKFSHASDVWMYGVT  304 (1039)
T ss_pred             hhhhhhhhhheeccc-ceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhc--------cccccccchhhhhhhh
Confidence            799999999999865 7899999999996655443222    12345799999985        4789999999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +|||++ |..||.|....+.+. .+....+.+.|..++.++.+++..||..+|++||+|..|.+
T Consensus       305 iWEMFtyGEePW~G~~g~qIL~-~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  305 IWEMFTYGEEPWVGCRGIQILK-NIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             HHhhhccCCCCCCCCCHHHHHH-hccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence            999997 889999988765543 33467788889999999999999999999999999999976

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.91  E-value=5.5e-24  Score=162.53  Aligned_cols=136  Identities=24%  Similarity=0.374  Sum_probs=104.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc----------------------------------ccc------------
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET----------------------------------VTE------------   34 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~----------------------------------~~~------------   34 (198)
                      |-|||||||||+..+ |++.|+||-++....                                  ...            
T Consensus       201 vYRDLKPENILvred-GHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~  279 (459)
T KOG0610|consen  201 VYRDLKPENILVRED-GHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRS  279 (459)
T ss_pred             eeccCCcceeEEecC-CcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccccccc
Confidence            569999999999977 899999999864110                                  000            


Q ss_pred             -----------cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHcc
Q 029154           35 -----------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH  103 (198)
Q Consensus        35 -----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~  103 (198)
                                 .....+||-.|+|||++.+        ...+.++|+|+||+++|||+.|..||.|..+.......+...
T Consensus       280 ~p~~~aep~~~RSnSFVGThEYlAPEvI~G--------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~  351 (459)
T KOG0610|consen  280 LPELVAEPTGARSNSFVGTHEYLAPEVIRG--------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQP  351 (459)
T ss_pred             chhhhcCCCCccccccccccccccceeeec--------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCC
Confidence                       0112478999999999975        567889999999999999999999999988877666655433


Q ss_pred             CCCCCCCCCcHHHHHHHHHhcccCCCCCCC----HHHHHHHHHHHHhh
Q 029154          104 ARPGLPEDISPDLAFIVQSCWVEDPNLRPS----FSQIIRMLNAFLFT  147 (198)
Q Consensus       104 ~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps----~~~~l~~l~~~~~~  147 (198)
                      ...+--..++..+++||+++|.+||.+|..    +.||-+  |.++..
T Consensus       352 l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~--HpFF~g  397 (459)
T KOG0610|consen  352 LKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR--HPFFEG  397 (459)
T ss_pred             CcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc--CccccC
Confidence            332222346789999999999999999987    888887  665543

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6e-24  Score=164.33  Aligned_cols=136  Identities=24%  Similarity=0.364  Sum_probs=100.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc------------------------------cccCCCCccceecccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE------------------------------MMTAETGTYRWMAPEL   50 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~------------------------------~~~~~~gt~~y~aPE~   50 (198)
                      +|+||||+||+++.+ +.++|+|||++.......                              ......|+..|++||+
T Consensus       125 ~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~  203 (316)
T cd05574         125 VYRDLKPENILLHES-GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEV  203 (316)
T ss_pred             eccCCChHHeEEcCC-CCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHH
Confidence            699999999999976 679999999986432110                              0112367889999999


Q ss_pred             cccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCC
Q 029154           51 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      +.+        ..++.++|+||||+++|++++|..||.+.......................+.++.+++.+||..||.+
T Consensus       204 ~~~--------~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  275 (316)
T cd05574         204 ISG--------DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSK  275 (316)
T ss_pred             HcC--------CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhH
Confidence            853        457889999999999999999999998766543332222122222222236899999999999999999


Q ss_pred             CCC----HHHHHHHHHHHHhh
Q 029154          131 RPS----FSQIIRMLNAFLFT  147 (198)
Q Consensus       131 Rps----~~~~l~~l~~~~~~  147 (198)
                      ||+    +++++.  +.|+..
T Consensus       276 R~s~~~~~~~ll~--~~~~~~  294 (316)
T cd05574         276 RLGSKRGAAEIKQ--HPFFRG  294 (316)
T ss_pred             CCCchhhHHHHHc--Cchhhc
Confidence            999    888888  555543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.91  E-value=1.2e-23  Score=161.10  Aligned_cols=139  Identities=26%  Similarity=0.413  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+++.+||+|||++...... .......++..|++||.+.+       ...++.++|+||+|+++|+
T Consensus       124 ~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-------~~~~~~~~Dv~slG~i~~~  196 (294)
T PLN00009        124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLG-------SRHYSTPVDIWSVGCIFAE  196 (294)
T ss_pred             eCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhC-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999866567999999999754322 22234567889999998743       2457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC-------------------CC--------CCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR-------------------PG--------LPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~~--------~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      +++|..||..................                   +.        .....++.+.+++.+||..+|.+||
T Consensus       197 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp  276 (294)
T PLN00009        197 MVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI  276 (294)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc
Confidence            99999999876544333221110000                   00        1134678899999999999999999


Q ss_pred             CHHHHHHHHHHHHhhc
Q 029154          133 SFSQIIRMLNAFLFTL  148 (198)
Q Consensus       133 s~~~~l~~l~~~~~~~  148 (198)
                      ++.++++  +.|+...
T Consensus       277 s~~~~l~--~~~~~~~  290 (294)
T PLN00009        277 TARAALE--HEYFKDL  290 (294)
T ss_pred             CHHHHhc--CchHhHH
Confidence            9999998  6665543

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=4.4e-24  Score=162.78  Aligned_cols=131  Identities=30%  Similarity=0.472  Sum_probs=99.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.++|+|||++...... ......|+..|++||++.+        ..++.++|+|||||++|++
T Consensus       126 ~H~dl~p~nil~~~~-~~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~--------~~~~~~~Di~slG~~l~~l  195 (284)
T cd06620         126 MHRDIKPSNILVNSR-GQIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQG--------GKYTVKSDVWSLGISIIEL  195 (284)
T ss_pred             eccCCCHHHEEECCC-CcEEEccCCcccchhhh-ccCccccCcccCCHHHHcc--------CCCCccchHHHHHHHHHHH
Confidence            699999999999966 67999999998643221 1234578999999998753        4678899999999999999


Q ss_pred             HcCCCCCCCCCcH----------HHHHHHHHccCCCCCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           81 LTNRLPFEGMSNL----------QAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        81 ~~g~~p~~~~~~~----------~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ++|..||......          ............+.++.. ++.++.+++.+||..||.+||++.+++++.
T Consensus       196 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         196 ALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             HhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            9999999754431          111222222333333333 778999999999999999999999999843

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.91  E-value=2.1e-23  Score=157.82  Aligned_cols=138  Identities=22%  Similarity=0.419  Sum_probs=96.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||++.......   ......++..|++||++....... ....++.++|+||||+++
T Consensus       121 ~H~dikp~nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~~~~~~~~DiwslG~~l  198 (268)
T cd05086         121 LHSDLALRNCFLTSD-LTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGL-ITAEQTKPSNVWALGVTL  198 (268)
T ss_pred             eccCCccceEEEcCC-ccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCcc-ccCCCCCcchhHHHHHHH
Confidence            699999999999976 679999999986422211   122346788999999874210000 113457789999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHcc----CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKH----ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |||++ |..||................    ..+..+..+++.+.+++.+|| .+|.+||+++++++.|
T Consensus       199 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l  266 (268)
T cd05086         199 WELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL  266 (268)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence            99986 567887655433222211111    223344557889999999999 6799999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.5e-24  Score=171.97  Aligned_cols=141  Identities=30%  Similarity=0.552  Sum_probs=115.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc-CCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT-AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||-..|+|+..+ +.+||+|||+++....-.... ...-...|+|||.+..        ..|+.++||||||+++||
T Consensus       284 IHRDIAARNcL~~~~-~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~--------~~~s~kTDV~sfGV~~~E  354 (474)
T KOG0194|consen  284 IHRDIAARNCLYSKK-GVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNT--------GIFSFKTDVWSFGVLLWE  354 (474)
T ss_pred             cchhHhHHHheecCC-CeEEeCccccccCCcceeeccccccCcceecChhhhcc--------CccccccchhheeeeEEe
Confidence            799999999999976 568999999997543111111 1123568999999864        578999999999999999


Q ss_pred             HHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           80 LLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        80 ~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      +++ |..||.+...............+...|...+.++..++.+||..+|++||+|.++.+.|+.+......
T Consensus       355 if~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  355 IFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             eeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            997 88899998876555444466777788888999999999999999999999999999999988766554

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.91  E-value=3.3e-25  Score=167.61  Aligned_cols=135  Identities=23%  Similarity=0.326  Sum_probs=101.2

Q ss_pred             CCCCCCCCCeEEcCCC-------------------CceEEecccCcccCcccccccCCCCccceeccccccccccccccc
Q 029154            1 MGKFMKEDNLLLTPDQ-------------------KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK   61 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-------------------~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~   61 (198)
                      +|.||||||||+..+.                   ..+||+|||.+.......  ++.+.|..|.|||++.+        
T Consensus       214 ~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLg--------  283 (415)
T KOG0671|consen  214 THTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILG--------  283 (415)
T ss_pred             eecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheec--------
Confidence            6999999999995431                   248999999997654332  45678999999999975        


Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC-------------------------------
Q 029154           62 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE-------------------------------  110 (198)
Q Consensus        62 ~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~-------------------------------  110 (198)
                      -+++.++||||+||+++|+.+|...|++..+....  .+++....++|.                               
T Consensus       284 LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHL--aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v  361 (415)
T KOG0671|consen  284 LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHL--AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYV  361 (415)
T ss_pred             cCcCCccCceeeeeEEEEeeccceecccCCcHHHH--HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhh
Confidence            67899999999999999999999999877654432  111111111110                               


Q ss_pred             ---------------CCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          111 ---------------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       111 ---------------~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                                     .-..++.+|+.+||..||++|+|+.|++.  |.++..+.
T Consensus       362 ~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~--HpFF~~~~  413 (415)
T KOG0671|consen  362 FEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS--HPFFARLT  413 (415)
T ss_pred             hcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc--CHHhhcCC
Confidence                           01245889999999999999999999999  77766543

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.4e-24  Score=160.23  Aligned_cols=136  Identities=29%  Similarity=0.492  Sum_probs=103.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.++|+|||++....... ......|+..|++||.+..       ...++.++|+||||+++|+
T Consensus       123 ~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slG~~l~~  194 (277)
T cd06917         123 IHRDIKAANILVTNT-GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITE-------GKYYDTKADIWSLGITIYE  194 (277)
T ss_pred             ccCCcCHHHEEEcCC-CCEEEccCCceeecCCCccccccccCCcceeCHHHhcc-------CCccccchhHHHHHHHHHH
Confidence            699999999999976 679999999987543322 2233568889999998743       2456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +++|..||.+........ .......+.++.. ++.++.+++.+||..||++||++.+++.  +.|+..
T Consensus       195 ll~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~--~~~~~~  260 (277)
T cd06917         195 MATGNPPYSDVDAFRAMM-LIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK--SKWIKA  260 (277)
T ss_pred             HHhCCCCCCCCChhhhhh-ccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh--ChHhhc
Confidence            999999998765433221 1112222333433 7889999999999999999999999998  666643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.91  E-value=1.7e-23  Score=158.66  Aligned_cols=133  Identities=27%  Similarity=0.566  Sum_probs=100.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.++++|||+++......  ......++..|++||.+.+        ..++.++|+||||+++|
T Consensus       139 ~H~dlkp~Nili~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~slG~~l~  209 (275)
T cd05046         139 VHRDLAARNCLVSSQ-REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE--------DDFSTKSDVWSFGVLMW  209 (275)
T ss_pred             ccCcCccceEEEeCC-CcEEEcccccccccCcccccccCCceeEEeecChhhhcc--------CCCCchhhHHHHHHHHH
Confidence            699999999999976 679999999986432221  1223456778999998743        45678899999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ++++ |..||.....................+..++..+.+++.+||..+|.+||++.+++..|.
T Consensus       210 ~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         210 EVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            9998 788987655433222222122223445678899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.90  E-value=8e-24  Score=161.16  Aligned_cols=131  Identities=29%  Similarity=0.384  Sum_probs=97.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......++..|++||.+.+       ...++.++|+||+|+++|+
T Consensus       122 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~~Di~slG~i~~~  193 (286)
T cd07847         122 IHRDVKPENILITKQ-GQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVG-------DTQYGPPVDVWAIGCVFAE  193 (286)
T ss_pred             eecCCChhhEEEcCC-CcEEECccccceecCCCcccccCcccccccCCHHHHhC-------CCCcCchhhhHHHHHHHHH
Confidence            699999999999976 679999999997543322 2234567889999998743       2456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHH--cc-----------------CCCCC----------CCCCcHHHHHHHHHhcccCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAF--KH-----------------ARPGL----------PEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~--~~-----------------~~~~~----------p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      +++|..||.+............  ..                 ...+.          ...++..+.+++.+||..+|++
T Consensus       194 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  273 (286)
T cd07847         194 LLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTE  273 (286)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccc
Confidence            9999999987665433221110  00                 00000          1235788999999999999999


Q ss_pred             CCCHHHHHH
Q 029154          131 RPSFSQIIR  139 (198)
Q Consensus       131 Rps~~~~l~  139 (198)
                      ||++.+++.
T Consensus       274 Rp~~~eil~  282 (286)
T cd07847         274 RLSCEELLE  282 (286)
T ss_pred             cCCHHHHhc
Confidence            999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.90  E-value=8.1e-24  Score=159.30  Aligned_cols=133  Identities=26%  Similarity=0.438  Sum_probs=100.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-----ccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +|+||||+||+++.+ +.+||+|||++........     .....++..|++||.+.+.     ....++.++|+||||+
T Consensus       121 ~H~dl~~~nil~~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-----~~~~~~~~~Dv~s~G~  194 (264)
T cd06626         121 VHRDIKPANIFLDHN-GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGG-----KGKGHGRAADIWSLGC  194 (264)
T ss_pred             ccCCCCHHHEEECCC-CCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCC-----CCCCCCcccchHHHHH
Confidence            699999999999976 6799999999875432211     1134578899999998541     0123688999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCC--cHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI--SPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|++++|..||..................+.+|...  ++.+.+++.+||..+|.+||++.+++.
T Consensus       195 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         195 VVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            9999999999997654333332222334444555544  899999999999999999999999887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.90  E-value=1.2e-23  Score=158.33  Aligned_cols=135  Identities=27%  Similarity=0.502  Sum_probs=106.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc-cCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM-TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.++|+|||++......... ....++..|++||.+..        ..++.++|+||||+++|+
T Consensus       122 ~H~~l~~~ni~~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--------~~~~~~~Dv~slG~il~~  192 (264)
T cd06623         122 IHRDIKPSNLLINSK-GEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG--------ESYSYAADIWSLGLTLLE  192 (264)
T ss_pred             ccCCCCHHHEEECCC-CCEEEccCccceecccCCCcccceeecccccCHhhhCC--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 67999999998754332222 23467889999998753        467889999999999999


Q ss_pred             HHcCCCCCCCCC--cHHHHHHHHHccCCCCCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMS--NLQAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..||....  ..............+..+.. ++..+.+++.+||..+|++||++.++++  +.++.
T Consensus       193 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~--~~~~~  260 (264)
T cd06623         193 CALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ--HPFIK  260 (264)
T ss_pred             HHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh--CHHHH
Confidence            999999997664  33333444444455556666 8899999999999999999999999998  56654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.90  E-value=6.2e-24  Score=162.40  Aligned_cols=134  Identities=28%  Similarity=0.480  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......|+..|++||.+.....   ....++.++|+||+|+++|+
T Consensus       150 vH~dlkp~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~~~~~~Di~slGvi~~e  225 (291)
T cd06639         150 IHRDVKGNNILLTTE-GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ---YDYSYDARCDVWSLGITAIE  225 (291)
T ss_pred             eccCCCHHHEEEcCC-CCEEEeecccchhcccccccccCccCCccccChhhhcCCCC---cccccCCccchHHHHHHHHH
Confidence            699999999999976 679999999987543222 1233568889999998743110   01236789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|+.||........... ......+  ..+......+.+++.+||..+|++||++.++++
T Consensus       226 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         226 LGDGDPPLFDMHPVKTLFK-IPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HhhCCCCCCCCcHHHHHHH-HhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            9999999987654433322 2222222  234557788999999999999999999999998

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.90  E-value=7.8e-24  Score=165.15  Aligned_cols=139  Identities=27%  Similarity=0.431  Sum_probs=100.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+||+++.+ +.+||+|||++.......    ......|+..|+|||.+.+       ...++.++|+||+|++
T Consensus       128 vH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DvwslGvi  199 (336)
T cd07849         128 LHRDLKPSNLLLNTN-CDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLN-------SKGYTKAIDIWSVGCI  199 (336)
T ss_pred             eccCCCHHHEEECCC-CCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhC-------CCCCCcHHHHHHHHHH
Confidence            699999999999976 679999999987543221    1123468899999998642       2457889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHH----------------------HccC--CCC-----CCCCCcHHHHHHHHHhcccC
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAA----------------------FKHA--RPG-----LPEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~----------------------~~~~--~~~-----~p~~~~~~~~~l~~~~l~~d  127 (198)
                      +|+|++|+.||.+...........                      ....  ...     .....++++.+++.+||..|
T Consensus       200 l~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  279 (336)
T cd07849         200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN  279 (336)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence            999999999997654322110000                      0000  000     01235778999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhhcC
Q 029154          128 PNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |.+||++.++++  +.|+....
T Consensus       280 P~~Rpt~~e~l~--hp~~~~~~  299 (336)
T cd07849         280 PHKRITVEEALA--HPYLEQYH  299 (336)
T ss_pred             hhhCcCHHHHhc--CccccccC
Confidence            999999999999  66666544

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.90  E-value=2.4e-23  Score=161.16  Aligned_cols=132  Identities=31%  Similarity=0.481  Sum_probs=101.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.....   .....|+..|++||.+...     ..+.++.++|+||||+++|++
T Consensus       147 ~H~dL~p~Nil~~~~-~~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~-----~~~~~~~~~Dv~slGvil~el  217 (317)
T cd06635         147 IHRDIKAGNILLTEP-GQVKLADFGSASIASP---ANSFVGTPYWMAPEVILAM-----DEGQYDGKVDVWSLGITCIEL  217 (317)
T ss_pred             ccCCCCcccEEECCC-CCEEEecCCCccccCC---cccccCCccccChhhhhcC-----CCCCCCccccHHHHHHHHHHH
Confidence            699999999999876 6799999999864332   2245688899999986321     124578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ++|..||........................++..+.+++.+||..+|.+||++.++++++
T Consensus       218 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         218 AERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             HhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            9999999776544433333322333333456788999999999999999999999999844

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.90  E-value=8.9e-24  Score=159.13  Aligned_cols=135  Identities=27%  Similarity=0.438  Sum_probs=104.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.++|+|||++.............++..|++||.+..        ..++.++|+||+|+++|++
T Consensus       115 ~h~dl~~~nilv~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------~~~~~~~Di~slG~il~~l  185 (262)
T cd05572         115 IYRDLKPENLLLDSN-GYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILN--------KGYDFSVDYWSLGILLYEL  185 (262)
T ss_pred             ccCCCCHHHEEEcCC-CCEEEeeCCcccccCcccccccccCCcCccChhHhcC--------CCCCChhhhhhhHHHHHHH
Confidence            699999999999976 6799999999876544322234568889999998743        5578899999999999999


Q ss_pred             HcCCCCCCCCCc-HHHHHHHHH-ccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSN-LQAAYAAAF-KHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~-~~~~~~~~~-~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|..||..... ......... ....+..|...+.++.+++.+||..+|.+||+     +.|+++  +.|+.
T Consensus       186 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~--~~~~~  256 (262)
T cd05572         186 LTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK--HKWFN  256 (262)
T ss_pred             HhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc--Chhhh
Confidence            999999976652 122222222 23455667777899999999999999999999     888888  55544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.90  E-value=6.9e-24  Score=162.32  Aligned_cols=132  Identities=30%  Similarity=0.376  Sum_probs=97.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+++.+||+|||+++..... .......+++.|+|||.+.+       ...++.++|+||||+++|+
T Consensus       132 ~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~~Di~slG~~l~~  204 (295)
T cd07837         132 MHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLG-------STHYSTPVDIWSVGCIFAE  204 (295)
T ss_pred             eecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhC-------CCCCCchHHHHHHHHHHHH
Confidence            699999999999974578999999998743221 11223456788999998743       2456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--------------------------CCCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--------------------------GLPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------~~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      |++|..||.+................+                          .....+++++.+++.+||..||.+||+
T Consensus       205 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~  284 (295)
T cd07837         205 MSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS  284 (295)
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC
Confidence            999999998765543322211100000                          001346788999999999999999999


Q ss_pred             HHHHHH
Q 029154          134 FSQIIR  139 (198)
Q Consensus       134 ~~~~l~  139 (198)
                      +.+++.
T Consensus       285 ~~eil~  290 (295)
T cd07837         285 AKAALT  290 (295)
T ss_pred             HHHHhc
Confidence            999987

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.90  E-value=2.1e-23  Score=158.91  Aligned_cols=135  Identities=25%  Similarity=0.441  Sum_probs=97.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+||+++.+ +.+||+|||+++.......    .....++..|++||++.+        ..++.++|+||||++
T Consensus       130 ~H~dlkp~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~  200 (284)
T cd05081         130 VHRDLATRNILVESE-NRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTE--------SKFSVASDVWSFGVV  200 (284)
T ss_pred             eeccCCHhhEEECCC-CeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhcc--------CCcChHHHHHHHHHH
Confidence            699999999999976 6799999999975432211    111223456999998753        557889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHH---------------HHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQ---------------AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +||+++|..++.......               ............+.+..++.++.+++.+||..+|++|||+.++++.|
T Consensus       201 l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l  280 (284)
T cd05081         201 LYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQV  280 (284)
T ss_pred             HHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence            999999876543221100               00111122233345567889999999999999999999999999988


Q ss_pred             HHH
Q 029154          142 NAF  144 (198)
Q Consensus       142 ~~~  144 (198)
                      +.+
T Consensus       281 ~~~  283 (284)
T cd05081         281 EAI  283 (284)
T ss_pred             Hhc
Confidence            753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.90  E-value=8e-24  Score=163.24  Aligned_cols=136  Identities=29%  Similarity=0.451  Sum_probs=102.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++......   ....++..|++||.+.+.     ....++.++|+|||||++|++
T Consensus       137 ~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~-----~~~~~~~~~Di~slG~il~el  207 (308)
T cd06634         137 IHRDVKAGNILLSEP-GLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAM-----DEGQYDGKVDVWSLGITCIEL  207 (308)
T ss_pred             ccCCCCHHhEEECCC-CcEEECCcccceeecCc---ccccCCccccCHHHHhhc-----ccCCCCcccchHHHHHHHHHH
Confidence            699999999999976 67999999998653321   234678899999986421     124467899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||.....................+..++..+.+++.+||..+|.+||++.+++.  +.++..
T Consensus       208 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~--~~~~~~  272 (308)
T cd06634         208 AERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK--HRFVLR  272 (308)
T ss_pred             HcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhh--Cccccc
Confidence            99999987655433333222222222234467889999999999999999999999998  455444

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.90  E-value=8.8e-24  Score=165.26  Aligned_cols=139  Identities=27%  Similarity=0.375  Sum_probs=102.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||+++.....  .....++..|+|||.+.+       ...++.++|+||||+++||+
T Consensus       139 ~H~dlkp~NIll~~~-~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slGvil~el  208 (342)
T cd07879         139 IHRDLKPGNLAVNED-CELKILDFGLARHADAE--MTGYVVTRWYRAPEVILN-------WMHYNQTVDIWSVGCIMAEM  208 (342)
T ss_pred             ccCCCCHHHEEECCC-CCEEEeeCCCCcCCCCC--CCCceeeecccChhhhcC-------ccccCchHHHHHHHHHHHHH
Confidence            699999999999976 67999999998754321  233467889999998743       23478899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHcc---------------------CCCCC--------CCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKH---------------------ARPGL--------PEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~~~--------p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|+.||.+..............                     ..+..        ....++++.+++.+||+.||.+|
T Consensus       209 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  288 (342)
T cd07879         209 LTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKR  288 (342)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhC
Confidence            99999998765333221111000                     00000        12356789999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCC
Q 029154          132 PSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~~  151 (198)
                      |++++++.  +.|+......
T Consensus       289 ~~~~e~l~--h~~f~~~~~~  306 (342)
T cd07879         289 LTATEALE--HPYFDSFRDA  306 (342)
T ss_pred             cCHHHHhc--Ccchhhcccc
Confidence            99999998  7777665543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.90  E-value=9.8e-24  Score=165.01  Aligned_cols=142  Identities=20%  Similarity=0.333  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+||+++.++..+||+|||++.......    ......++..|+|||.+..       ...++.++|+||+||+
T Consensus       136 vH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwSlGvi  208 (342)
T cd07854         136 LHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLS-------PNNYTKAIDMWAAGCI  208 (342)
T ss_pred             ccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhC-------ccccCchhhHHHHHHH
Confidence            6999999999998665678999999986432111    1122357889999998642       2457789999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHc-----------------------cCCCC-----CCCCCcHHHHHHHHHhcccCC
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFK-----------------------HARPG-----LPEDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~-----------------------~~~~~-----~p~~~~~~~~~l~~~~l~~dp  128 (198)
                      +|++++|..||.+.............                       .....     ....++.++.+++.+||..||
T Consensus       209 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  288 (342)
T cd07854         209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNP  288 (342)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCc
Confidence            99999999999766543322111100                       00000     123467889999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHhhcCCC
Q 029154          129 NLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       129 ~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      .+||++.+++.  +.|+.....+
T Consensus       289 ~~R~t~~ell~--h~~~~~~~~~  309 (342)
T cd07854         289 MDRLTAEEALM--HPYMSCYSCP  309 (342)
T ss_pred             hhccCHHHHhC--CCccccccCC
Confidence            99999999998  7777644433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.90  E-value=2.1e-24  Score=168.16  Aligned_cols=136  Identities=20%  Similarity=0.326  Sum_probs=97.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||++.......  .....+||+.|+|||++....   .....++.++|+|||||++|
T Consensus       124 iHrDlkp~Nili~~~-~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~~~DvwSlGvil~  199 (332)
T cd05623         124 VHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME---DGKGKYGPECDWWSLGVCMY  199 (332)
T ss_pred             EecCCCHHHEEECCC-CCEEEeecchheecccCCcceecccccCccccCHHHHhccc---cCCCCCCCcCCEEeeHHHHH
Confidence            699999999999966 679999999986432211  122357999999999874210   01245788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCC---CCCCcHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGL---PEDISPDLAFIVQSCWVEDPNL--RPSFSQIIRM  140 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~~  140 (198)
                      ||++|+.||.+...................   +..+++++.+++.+|+..++..  |+++.+++++
T Consensus       200 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         200 EMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            999999999876644433222222222222   3457899999999999765544  5789999883

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.90  E-value=6.9e-24  Score=161.33  Aligned_cols=135  Identities=24%  Similarity=0.390  Sum_probs=103.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++...... ......|+..|++||.+..       ...++.++|+||+|+++|++
T Consensus       119 ~H~di~p~nili~~~-~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~s~G~~l~~l  189 (278)
T cd05606         119 VYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQK-------GVAYDSSADWFSLGCMLFKL  189 (278)
T ss_pred             EcCCCCHHHEEECCC-CCEEEccCcCccccCcc-CCcCcCCCcCCcCcHHhcC-------CCCCCcccchHhHHHHHHHH
Confidence            699999999999976 67999999998744322 2234578999999999753       23578899999999999999


Q ss_pred             HcCCCCCCCCCcHHH-HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQA-AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      ++|..||........ .............|..++.++.+++.+||..+|.+||     ++.++++  +.|+.
T Consensus       190 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~--~~~~~  259 (278)
T cd05606         190 LRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE--HPFFR  259 (278)
T ss_pred             HhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh--Ccccc
Confidence            999999976532111 1122223344566777899999999999999999999     9999987  54443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=5.5e-24  Score=160.95  Aligned_cols=134  Identities=28%  Similarity=0.497  Sum_probs=98.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.+||+|||++...... .......|+..|+|||.+....   .....++.++|+||+|+++|+
T Consensus       135 ~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~~~~~~Dv~slG~il~~  210 (275)
T cd06608         135 IHRDIKGQNILLTKN-AEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDE---QPDASYDARSDVWSLGITAIE  210 (275)
T ss_pred             ccCCCCHHHEEEccC-CeEEECCCccceecccchhhhcCccccccccCHhHhcccc---cccCCccccccHHHhHHHHHH
Confidence            699999999999976 67999999998643322 1223456889999999874311   012456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||........... ......+..  +..++.++.+++.+||..||.+|||+.++++
T Consensus       211 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         211 LADGKPPLCDMHPMRALFK-IPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHhCCCCccccchHHHHHH-hhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            9999999976544333222 222222222  2346789999999999999999999999987

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.90  E-value=8.5e-24  Score=163.10  Aligned_cols=135  Identities=24%  Similarity=0.454  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+|||++.+ +.+||+|||++...... ......|+..|++||.+.+        ..++.++|+||||+++|++
T Consensus       122 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~--------~~~~~~~DiwslG~~l~~l  191 (308)
T cd06615         122 MHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG--------THYTVQSDIWSLGLSLVEM  191 (308)
T ss_pred             EECCCChHHEEEecC-CcEEEccCCCccccccc-ccccCCCCcCccChhHhcC--------CCCCccchHHHHHHHHHHH
Confidence            699999999999976 67999999998754322 2244678899999998743        4578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHH-----------------------------------HHHccCCCCCCC-CCcHHHHHHHHHhc
Q 029154           81 LTNRLPFEGMSNLQAAYA-----------------------------------AAFKHARPGLPE-DISPDLAFIVQSCW  124 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~-----------------------------------~~~~~~~~~~p~-~~~~~~~~l~~~~l  124 (198)
                      ++|..||...........                                   .......+..|. .++.++.+++.+||
T Consensus       192 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  271 (308)
T cd06615         192 AIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCL  271 (308)
T ss_pred             HhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHc
Confidence            999999865432111100                                   001111122222 36788999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhh
Q 029154          125 VEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       125 ~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ..+|++||++.++++  +.|+..
T Consensus       272 ~~~P~~Rpt~~~ll~--~~~~~~  292 (308)
T cd06615         272 KKNPKERADLKELTK--HPFIKR  292 (308)
T ss_pred             cCChhhCcCHHHHhc--Chhhhh
Confidence            999999999999999  666543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.90  E-value=7.7e-24  Score=160.86  Aligned_cols=135  Identities=23%  Similarity=0.399  Sum_probs=102.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.............++..|++||.+.+        ..++.++|+||+|+++|++
T Consensus       117 ~H~di~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~slG~il~~l  187 (277)
T cd05577         117 VYRDLKPENVLLDDH-GNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQG--------EVYDFSVDWFALGCTLYEM  187 (277)
T ss_pred             ccCCCCHHHEEECCC-CCEEEccCcchhhhccCCccccccCCCCcCCHHHhcC--------CCCCchhhhHHHHHHHHHH
Confidence            699999999999976 6799999999875433333344567889999998753        4478899999999999999


Q ss_pred             HcCCCCCCCCCcH--HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNL--QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      ++|+.||......  ...............+..+++++.+++.+||..||.+||     ++.+++.  +.|+.
T Consensus       188 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~--h~~~~  258 (277)
T cd05577         188 IAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE--HPLFK  258 (277)
T ss_pred             hhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh--Chhhh
Confidence            9999999765431  111111122334455677899999999999999999999     7777776  55553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.90  E-value=1.6e-23  Score=160.19  Aligned_cols=131  Identities=24%  Similarity=0.381  Sum_probs=94.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+|||++.+ +.+||+|||+++..... .......++..|++||.+.+       ...++.++|+||+|+++|+
T Consensus       125 ~H~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slG~~l~~  196 (291)
T cd07870         125 LHRDLKPQNLLISYL-GELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLG-------ATDYSSALDIWGAGCIFIE  196 (291)
T ss_pred             ccCCCChHHEEEcCC-CcEEEeccccccccCCCCCCCCCccccccccCCceeec-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998753321 12233457889999998753       2346789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC----------------------CCCC---------CCCcHHHHHHHHHhcccCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR----------------------PGLP---------EDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------~~~p---------~~~~~~~~~l~~~~l~~dp  128 (198)
                      +++|..||.+................                      ...+         ...++++.+++.+|+..||
T Consensus       197 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp  276 (291)
T cd07870         197 MLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFP  276 (291)
T ss_pred             HHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCc
Confidence            99999999865543222221111000                      0000         0125678999999999999


Q ss_pred             CCCCCHHHHHH
Q 029154          129 NLRPSFSQIIR  139 (198)
Q Consensus       129 ~~Rps~~~~l~  139 (198)
                      .+|||+.+++.
T Consensus       277 ~~R~t~~~~l~  287 (291)
T cd07870         277 KDRISAQDALL  287 (291)
T ss_pred             ccCcCHHHHhc
Confidence            99999999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.90  E-value=1.6e-23  Score=159.55  Aligned_cols=131  Identities=30%  Similarity=0.407  Sum_probs=96.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++...... .......++..|++||.+.+       ...++.++|+||||+++|+
T Consensus       122 ~H~~l~p~nill~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slG~il~~  193 (284)
T cd07860         122 LHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-------CKYYSTAVDIWSLGCIFAE  193 (284)
T ss_pred             ecCCCCHHHEEECCC-CCEEEeeccchhhcccCccccccccccccccCCeEEec-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998754322 12233457889999998753       2446788999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC---------------------------CCCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP---------------------------GLPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      +++|..||.+................+                           .....+++++.+++.+||..||++||
T Consensus       194 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  273 (284)
T cd07860         194 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI  273 (284)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCC
Confidence            999999997655433222211100000                           01234678899999999999999999


Q ss_pred             CHHHHHH
Q 029154          133 SFSQIIR  139 (198)
Q Consensus       133 s~~~~l~  139 (198)
                      ++.++++
T Consensus       274 t~~~~l~  280 (284)
T cd07860         274 SAKAALA  280 (284)
T ss_pred             CHHHHhc
Confidence            9999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.90  E-value=9.8e-24  Score=164.70  Aligned_cols=139  Identities=28%  Similarity=0.412  Sum_probs=101.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++...... .......++..|++||.+..       ...++.++|+||||+++|+
T Consensus       130 ~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~  201 (337)
T cd07858         130 LHRDLKPSNLLLNAN-CDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLN-------CSEYTTAIDVWSVGCIFAE  201 (337)
T ss_pred             ecCCCCHHHEEEcCC-CCEEECcCccccccCCCcccccccccccCccChHHHhc-------CCCCCCcccHHHHHHHHHH
Confidence            699999999999976 67999999999754332 22234567889999998742       2347889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHH----------------------Hcc--C--CC---CCCCCCcHHHHHHHHHhcccCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAA----------------------FKH--A--RP---GLPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~----------------------~~~--~--~~---~~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      +++|+.||.+...........                      ...  .  ..   .....+++++.+++.+||..+|.+
T Consensus       202 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  281 (337)
T cd07858         202 LLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSK  281 (337)
T ss_pred             HHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhh
Confidence            999999997654321110000                      000  0  00   112357888999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhcC
Q 029154          131 RPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       131 Rps~~~~l~~l~~~~~~~~  149 (198)
                      ||++.++++  +.|+....
T Consensus       282 Rps~~ell~--h~~~~~~~  298 (337)
T cd07858         282 RITVEEALA--HPYLASLH  298 (337)
T ss_pred             ccCHHHHHc--Ccchhhhc
Confidence            999999999  66666543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.90  E-value=1.3e-23  Score=162.00  Aligned_cols=136  Identities=27%  Similarity=0.363  Sum_probs=100.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++...... .......++..|+|||++.+       ...++.++|+||+|+++|+
T Consensus       130 ~H~dl~p~nil~~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DvwslG~il~e  201 (309)
T cd07845         130 IHRDLKVSNLLLTDK-GCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLG-------CTTYTTAIDMWAVGCILAE  201 (309)
T ss_pred             ecCCCCHHHEEECCC-CCEEECccceeeecCCccCCCCcccccccccChhhhcC-------CCCcCchHHHHHHHHHHHH
Confidence            699999999999976 67999999998754332 12223345788999998753       2457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC-----------------CCCCC-----------CCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA-----------------RPGLP-----------EDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~~p-----------~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      +++|..||.+...............                 ....+           ...++.+.+++.+||..||.+|
T Consensus       202 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R  281 (309)
T cd07845         202 LLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR  281 (309)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence            9999999987665443222111000                 00000           1247888999999999999999


Q ss_pred             CCHHHHHHHHHHHHh
Q 029154          132 PSFSQIIRMLNAFLF  146 (198)
Q Consensus       132 ps~~~~l~~l~~~~~  146 (198)
                      |++.+++.  +.|+.
T Consensus       282 ~t~~~il~--h~~f~  294 (309)
T cd07845         282 ATAEEALE--SSYFK  294 (309)
T ss_pred             cCHHHHhc--Chhhc
Confidence            99999998  67765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.90  E-value=3.3e-23  Score=157.33  Aligned_cols=128  Identities=25%  Similarity=0.403  Sum_probs=95.7

Q ss_pred             CCCCCCCCCeEEcCCC------CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ------KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~------~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      |||||||+|||++..+      ..+|++|||++......   ....++..|++||.+..       ...++.++|+||||
T Consensus       139 iH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~-------~~~~~~~~Dv~slG  208 (274)
T cd05076         139 VHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPG-------GNSLSTAADKWSFG  208 (274)
T ss_pred             cCCCCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcC-------CCCCCcHHHHHHHH
Confidence            7999999999997532      23799999987543221   22357788999998753       24578999999999


Q ss_pred             HHHHHHH-cCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           75 IVLWELL-TNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        75 ~~l~e~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +++||++ +|..||.+......... .  ......+....+++.+++.+||+.+|++||++.++++.|
T Consensus       209 ~~l~el~~~g~~p~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         209 TTLLEICFDGEVPLKERTPSEKERF-Y--EKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHHHHHhCCCCCccccChHHHHHH-H--HhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            9999985 78999976554322111 1  122334555678899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.90  E-value=1.4e-23  Score=163.19  Aligned_cols=137  Identities=23%  Similarity=0.433  Sum_probs=96.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--------cccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||++.+ +.+++.|||.........        ......++..|+|||++.+      ....++.++|+||
T Consensus       123 iH~dlkp~Nil~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~~Diws  195 (327)
T cd08227         123 VHRSVKASHILISVD-GKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQ------NLQGYDAKSDIYS  195 (327)
T ss_pred             ecCCCChhhEEEecC-CcEEEcccchhhccccccccccccccccccccceecccChHHhhc------ccCCCCchhhHHH
Confidence            699999999999976 679999998654221100        0112356778999999853      1245789999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCC---------------------------------------------C
Q 029154           73 FGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP---------------------------------------------G  107 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------------------------~  107 (198)
                      +||++||+++|..||............. ....+                                             +
T Consensus       196 lG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (327)
T cd08227         196 VGITACELANGHVPFKDMPATQMLLEKL-NGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHP  274 (327)
T ss_pred             HHHHHHHHHHCCCCCCCcchhHHHHHHh-cCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccc
Confidence            9999999999999997644322211111 00000                                             0


Q ss_pred             CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154          108 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       108 ~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ....+++.+.+++.+||..||.+|||++++++  +.|+..
T Consensus       275 ~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~--~p~f~~  312 (327)
T cd08227         275 YNRTFSPHFHHFVEQCLQRNPDARPSASTLLN--HSFFKQ  312 (327)
T ss_pred             cccccCHHHHHHHHHHHhhCchhcCCHHHHhc--Chhhhh
Confidence            11124678999999999999999999999998  666654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=9.4e-25  Score=173.58  Aligned_cols=133  Identities=27%  Similarity=0.453  Sum_probs=111.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||||.+||||+.+ .++||+|||++..........+.||++.|+|||++.+       ....++.+|+||+|+++|.+
T Consensus       177 vHrdLk~eNilL~~~-mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g-------~~y~gpe~D~Wslgvvly~L  248 (596)
T KOG0586|consen  177 VHRDLKAENILLDEN-MNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNG-------KKYDGPEVDIWSLGVVLYAL  248 (596)
T ss_pred             eccccchhhcccccc-cceeeeccccceeecccccccccCCCCCccChHhhcC-------cccCCcceehhhhhhhheee
Confidence            799999999999977 6799999999987777677788999999999999976       34557899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      +.|..||.+..-...  ..........+|..++.++.++++++|..+|.+|++.+++++  +.|.
T Consensus       249 V~GsLPFDG~~lk~L--r~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~--~~W~  309 (596)
T KOG0586|consen  249 VEGSLPFDGQNLKEL--RPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK--DRWR  309 (596)
T ss_pred             eecccccCCcccccc--cchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhh--hccc
Confidence            999999997653221  222234456778889999999999999999999999999998  4443

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.90  E-value=9.9e-24  Score=158.29  Aligned_cols=129  Identities=30%  Similarity=0.486  Sum_probs=102.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.++|+|||++........ .....|+..|++||++.+        ..++.++|+||||+++++
T Consensus       123 ~h~~l~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~Dv~slG~i~~~  193 (256)
T cd08218         123 LHRDIKSQNIFLTKD-GTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICEN--------RPYNNKSDIWALGCVLYE  193 (256)
T ss_pred             ecCCCCHHHEEEcCC-CCEEEeeccceeecCcchhhhhhccCCccccCHHHhCC--------CCCCCccchhHHHHHHHH
Confidence            699999999999976 6799999999875433221 223457889999998753        557789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||........ .........+..+..++.++.+++.+||..+|.+||++.++++
T Consensus       194 l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         194 MCTLKHAFEAGNMKNL-VLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHcCCCCccCCCHHHH-HHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            9999999976554333 2333444555667788999999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.90  E-value=3e-23  Score=159.07  Aligned_cols=142  Identities=30%  Similarity=0.358  Sum_probs=103.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++...... .......++..|+|||.+.+       ...++.++|+|||||++|+
T Consensus       124 ~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slG~il~e  195 (298)
T cd07841         124 LHRDLKPNNLLIASD-GVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFG-------ARHYGVGVDMWSVGCIFAE  195 (298)
T ss_pred             eecCCChhhEEEcCC-CCEEEccceeeeeccCCCccccccccceeeeCHHHHhC-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998754332 22233456788999998743       2456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC---------------------CC-----CCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR---------------------PG-----LPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~-----~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      +++|.++|.+................                     +.     .....+..+.+++.+||..||.+||+
T Consensus       196 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s  275 (298)
T cd07841         196 LLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT  275 (298)
T ss_pred             HHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC
Confidence            99998888765543322111100000                     00     11234678899999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCC
Q 029154          134 FSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~~~  152 (198)
                      +.++++  +.|+.....+.
T Consensus       276 ~~e~l~--~~~~~~~~~~~  292 (298)
T cd07841         276 ARQALE--HPYFSNDPAPT  292 (298)
T ss_pred             HHHHhh--CccccCCCCCC
Confidence            999999  77776655443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.90  E-value=3.3e-23  Score=155.56  Aligned_cols=129  Identities=26%  Similarity=0.403  Sum_probs=94.8

Q ss_pred             CCCCCCCCCeEEcCCCC------ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK------SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~------~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      +||||||+|||++.++.      .+||+|||++.....   .....++..|++||.+.+      ....++.++|+||||
T Consensus       123 ~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~------~~~~~~~~~Di~slG  193 (259)
T cd05037         123 VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRN------GQASLTIAADKWSFG  193 (259)
T ss_pred             ecccCccceEEEecCccccCCceeEEeCCCCccccccc---ccccccCCCccChhhhcC------CCCCcchhhHHHHHH
Confidence            69999999999986631      599999999875433   123456778999999754      113678899999999


Q ss_pred             HHHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           75 IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        75 ~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +++|++++ |..||......... ....  .....+......+.+++.+||..+|.+||++.++++.|
T Consensus       194 ~~~~~l~~~~~~p~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         194 TTLLEICSNGEEPLSTLSSSEKE-RFYQ--DQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHHHHhCCCCCcccCCchhHH-HHHh--cCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            99999998 57777665432211 1111  12222333348899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.8e-23  Score=158.99  Aligned_cols=139  Identities=31%  Similarity=0.534  Sum_probs=103.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++...... .......++..|++||.+....   .....++.++|+||+|+++|+
T Consensus       125 ~h~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---~~~~~~~~~sDi~slG~il~~  200 (280)
T cd06611         125 IHRDLKAGNILLTLD-GDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACET---FKDNPYDYKADIWSLGITLIE  200 (280)
T ss_pred             ccCCCChhhEEECCC-CCEEEccCccchhhcccccccceeecchhhcCHHHHhhcc---cCCCCCCccccHHHHHHHHHH
Confidence            699999999999976 67999999988643221 1223346888999999874211   112456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..||.+....... ........+  ..+..++.++.+++.+||..+|.+||++.++++  +.|+.
T Consensus       201 l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~--~~~~~  266 (280)
T cd06611         201 LAQMEPPHHELNPMRVL-LKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK--HPFVS  266 (280)
T ss_pred             HHhCCCCcccCCHHHHH-HHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc--Chhhc
Confidence            99999999876543332 222222222  335568899999999999999999999999998  66654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-23  Score=160.57  Aligned_cols=122  Identities=26%  Similarity=0.479  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC-cccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |-||||-+||+|+.+ +++||+|||+++.. .......+.|||+.|+|||++.        .+.|+..+|+|++|+++||
T Consensus       472 iYRDLKLDNvmLd~e-GHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~--------YqPYgksvDWWa~GVLLyE  542 (683)
T KOG0696|consen  472 IYRDLKLDNVMLDSE-GHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIA--------YQPYGKSVDWWAFGVLLYE  542 (683)
T ss_pred             eeeeccccceEeccC-CceEeeecccccccccCCcceeeecCCCcccccceEE--------ecccccchhHHHHHHHHHH
Confidence            569999999999987 79999999999843 3334456789999999999985        5889999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      |+.|++||.+.+....  ...+.......|..++.++.++....|...|.+|..
T Consensus       543 mlaGQpPFdGeDE~el--F~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  543 MLAGQPPFDGEDEDEL--FQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             HHcCCCCCCCCCHHHH--HHHHHHccCcCcccccHHHHHHHHHHhhcCCccccC
Confidence            9999999999775332  223334445678899999999999999999999953

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.90  E-value=2.1e-23  Score=158.97  Aligned_cols=131  Identities=27%  Similarity=0.426  Sum_probs=98.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||++.......  ......++..|++||++..       ...++.++|+||+|+++|
T Consensus       122 ~H~dl~~~ni~~~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-------~~~~~~~~Dv~slG~~l~  193 (288)
T cd07833         122 IHRDIKPENILVSES-GVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVG-------DTNYGKPVDVWAIGCIMA  193 (288)
T ss_pred             ecCCCCHHHeEECCC-CCEEEEeeecccccCCCccccccCcccccCCcCCchhcC-------CCCcCchhhHHHHHHHHH
Confidence            699999999999976 679999999987544332  2334567889999999854       226788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHc--cCC----------------------------CCCCCCCcHHHHHHHHHhcccCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFK--HAR----------------------------PGLPEDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~--~~~----------------------------~~~p~~~~~~~~~l~~~~l~~dp  128 (198)
                      ++++|..||.+.............  ...                            ...+..++.++.+++.+||..+|
T Consensus       194 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  273 (288)
T cd07833         194 ELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDP  273 (288)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCc
Confidence            999999999765543322211110  000                            01123357889999999999999


Q ss_pred             CCCCCHHHHHH
Q 029154          129 NLRPSFSQIIR  139 (198)
Q Consensus       129 ~~Rps~~~~l~  139 (198)
                      .+||+++++++
T Consensus       274 ~~Rps~~~il~  284 (288)
T cd07833         274 KERLTCDELLQ  284 (288)
T ss_pred             hhcccHHHHhc
Confidence            99999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.90  E-value=1.7e-23  Score=155.99  Aligned_cols=129  Identities=32%  Similarity=0.588  Sum_probs=99.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||+|+||+++.+ +.++|+|||++.............++..|++||.+.+        ..++.++|+||+|++++++
T Consensus       120 ~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------~~~~~~~Dv~slG~il~~l  190 (253)
T cd05122         120 IHRDIKAANILLTSD-GEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVING--------KPYDYKADIWSLGITAIEL  190 (253)
T ss_pred             ecCCCCHHHEEEccC-CeEEEeeccccccccccccccceecCCcccCHHHHcC--------CCCCccccHHHHHHHHHHH
Confidence            699999999999976 6799999999875443321234567889999998753        4478899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCC--CcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPED--ISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|..||............. ....+..+..  ++..+.+++.+||..||++||++.++++
T Consensus       191 ~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         191 AEGKPPYSELPPMKALFKIA-TNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HhCCCCCCCCchHHHHHHHH-hcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999998764433332222 1223333333  3889999999999999999999999987

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.90  E-value=4e-23  Score=161.21  Aligned_cols=141  Identities=28%  Similarity=0.375  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc------ccccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      +||||||+||+++.+ +.+||+|||++......      .......|+..|++||.+.+       ...++.++|+||||
T Consensus       129 ~H~dl~p~nill~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~sDi~slG  200 (337)
T cd07852         129 IHRDLKPSNILLNSD-CRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLG-------STRYTKGVDMWSVG  200 (337)
T ss_pred             ecCCCCHHHEEEcCC-CcEEEeeccchhccccccccccCcchhcccccccccCceeeec-------cccccccchHHHHH
Confidence            699999999999976 68999999998744321      12233568889999998743       24567899999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHcc-------------------------CC----CCCCCCCcHHHHHHHHHhcc
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFKH-------------------------AR----PGLPEDISPDLAFIVQSCWV  125 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~~-------------------------~~----~~~p~~~~~~~~~l~~~~l~  125 (198)
                      +++|++++|+.||.+..............                         ..    ......++.++.+++.+||.
T Consensus       201 ~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  280 (337)
T cd07852         201 CILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLV  280 (337)
T ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhcc
Confidence            99999999999997654332211100000                         00    01112367889999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154          126 EDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       126 ~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      .||++||++.++++  +.++.....+
T Consensus       281 ~~P~~Rps~~~il~--~~~~~~~~~~  304 (337)
T cd07852         281 FNPNKRLTAEEALE--HPYVAQFHNP  304 (337)
T ss_pred             CCcccccCHHHHhh--ChhhhhhccC
Confidence            99999999999998  6676655433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.90  E-value=2.4e-23  Score=162.29  Aligned_cols=142  Identities=25%  Similarity=0.397  Sum_probs=103.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +||||||+||+++.+ +.+||+|||++.......     ......|+..|++||.+..       ...++.++|+||+|+
T Consensus       129 vH~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-------~~~~~~~~Di~slG~  200 (334)
T cd07855         129 IHRDLKPSNLLVNED-CELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLS-------LPEYTTAIDMWSVGC  200 (334)
T ss_pred             ecCCCCHHHEEEcCC-CcEEecccccceeecccCcCCCcccccccccccccChHHhcC-------CcccccccchHHHHH
Confidence            699999999999976 679999999987443211     1123468889999998743       245788999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHH----------------------HHc--cCCCCC-----CCCCcHHHHHHHHHhccc
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAA----------------------AFK--HARPGL-----PEDISPDLAFIVQSCWVE  126 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~----------------------~~~--~~~~~~-----p~~~~~~~~~l~~~~l~~  126 (198)
                      ++|+|++|+.||.+..........                      ...  ......     ....++++.+++.+||+.
T Consensus       201 ~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  280 (334)
T cd07855         201 IFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQF  280 (334)
T ss_pred             HHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccC
Confidence            999999999999765432211100                      000  000111     134678999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHhhcCCCC
Q 029154          127 DPNLRPSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       127 dp~~Rps~~~~l~~l~~~~~~~~~~~  152 (198)
                      +|.+||++++++.  +.|+.....+.
T Consensus       281 ~P~~Rpt~~~~l~--~~~~~~~~~~~  304 (334)
T cd07855         281 DPEERITVEQALQ--HPFLAQYHDPD  304 (334)
T ss_pred             ChhhCcCHHHHHh--ChhhhhccCCc
Confidence            9999999999999  78877665543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.90  E-value=3.6e-23  Score=160.92  Aligned_cols=141  Identities=28%  Similarity=0.420  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+|||++.+ +.++|+|||++.......    ......++..|++||.+.+       ...++.++|+||+|++
T Consensus       125 ~H~dlkp~nili~~~-~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~sDi~slG~i  196 (330)
T cd07834         125 IHRDLKPSNILVNSN-CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS-------SSRYTKAIDIWSVGCI  196 (330)
T ss_pred             ecCCCCHHHEEEcCC-CCEEEcccCceEeecccccccccccccccccCcCCceeeec-------ccCCCcchhHHHHHHH
Confidence            699999999999977 789999999997543322    2334567889999999864       2267889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCC-----------------------------CCCCCCcHHHHHHHHHhcccC
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARP-----------------------------GLPEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~p~~~~~~~~~l~~~~l~~d  127 (198)
                      +|++++|..||.+................+                             .....++.++.+++.+||+.+
T Consensus       197 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  276 (330)
T cd07834         197 FAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD  276 (330)
T ss_pred             HHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence            999999999998765432211111100000                             011236788999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhhcCCC
Q 029154          128 PNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      |.+||++.++++  +.|+.....+
T Consensus       277 P~~Rpt~~~ll~--~~~~~~~~~~  298 (330)
T cd07834         277 PKKRITADEALA--HPYLAQLHDP  298 (330)
T ss_pred             hhhCCCHHHHHh--CccHHhhccc
Confidence            999999999998  6677655443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.90  E-value=1.9e-23  Score=159.03  Aligned_cols=131  Identities=31%  Similarity=0.449  Sum_probs=97.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.++|+|||++.......  ......|+..|++||.+.+       ...++.++|+||+|++++
T Consensus       121 ~H~dl~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~~l~  192 (286)
T cd07832         121 MHRDLKPANLLISAD-GVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG-------ARKYDPGVDLWAVGCIFA  192 (286)
T ss_pred             ecCCcCHHHEEEcCC-CcEEEeeeeecccccCCCCCccccccCcccccCceeeec-------cccCCchhHHHHHHHHHH
Confidence            699999999999976 679999999987543322  2344578899999998753       345688999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC----------------------------CCCCCCcHHHHHHHHHhcccCCCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP----------------------------GLPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      ++++|.++|.+................+                            ......+..+.+++.+||..+|.+
T Consensus       193 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  272 (286)
T cd07832         193 ELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSK  272 (286)
T ss_pred             HHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhh
Confidence            9999988887655433221111100000                            011235688999999999999999


Q ss_pred             CCCHHHHHH
Q 029154          131 RPSFSQIIR  139 (198)
Q Consensus       131 Rps~~~~l~  139 (198)
                      ||++++++.
T Consensus       273 R~~~~~~l~  281 (286)
T cd07832         273 RLSAAEALR  281 (286)
T ss_pred             CCCHHHHhh
Confidence            999999998

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.90  E-value=2.7e-23  Score=155.84  Aligned_cols=130  Identities=30%  Similarity=0.490  Sum_probs=100.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.++..+||+|||.+....... ......|+..|+|||.+..        ..++.++|+||||+++++
T Consensus       123 ~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--------~~~~~~~Dv~slG~il~~  194 (257)
T cd08225         123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQN--------RPYNNKTDIWSLGCVLYE  194 (257)
T ss_pred             ccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcC--------CCCCchhhHHHHHHHHHH
Confidence            6999999999998775567999999987543322 1223468889999998743        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||........ ............+...+.++.+++.+||..+|++||++.++++
T Consensus       195 l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         195 LCTLKHPFEGNNLHQL-VLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHhCCCCCCCccHHHH-HHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            9999999976553332 2233333344455567889999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.90  E-value=2.4e-23  Score=159.36  Aligned_cols=131  Identities=30%  Similarity=0.372  Sum_probs=97.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++...... .......++..|++||.+.+       ...++.++|+||+|+++|+
T Consensus       128 ~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~~Di~slG~~l~~  199 (293)
T cd07843         128 LHRDLKTSNLLLNNR-GILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLG-------AKEYSTAIDMWSVGCIFAE  199 (293)
T ss_pred             eeccCCHHHEEECCC-CcEEEeecCceeeccCCccccccccccccccCchhhcC-------CccccchhhHHHHHHHHHH
Confidence            699999999999976 67999999998754432 22334567889999998753       2346789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHc-----------------------------cCCCCCCCC-CcHHHHHHHHHhcccCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFK-----------------------------HARPGLPED-ISPDLAFIVQSCWVEDPN  129 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~-----------------------------~~~~~~p~~-~~~~~~~l~~~~l~~dp~  129 (198)
                      +++|..||...............                             .....++.. +++.+.+++.+||..||+
T Consensus       200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  279 (293)
T cd07843         200 LLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA  279 (293)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence            99999999865543222111000                             000112222 578899999999999999


Q ss_pred             CCCCHHHHHH
Q 029154          130 LRPSFSQIIR  139 (198)
Q Consensus       130 ~Rps~~~~l~  139 (198)
                      +||++.|++.
T Consensus       280 ~R~t~~ell~  289 (293)
T cd07843         280 KRISAEDALK  289 (293)
T ss_pred             ccCCHHHHhc
Confidence            9999999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.90  E-value=1.7e-23  Score=160.36  Aligned_cols=137  Identities=32%  Similarity=0.521  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......|+..|++||.+..        ..++.++|+||||+++|+
T Consensus       137 ~H~dL~p~Nili~~~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Dv~slG~ll~~  207 (293)
T cd06647         137 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--------KAYGPKVDIWSLGIMAIE  207 (293)
T ss_pred             eeccCCHHHEEEcCC-CCEEEccCcceecccccccccccccCChhhcCchhhcc--------CCCCchhhHHHHHHHHHH
Confidence            599999999999976 679999999886443222 2233468889999998743        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +++|..||............. ....+  ..+..++..+.+++.+||..+|.+||++.+++.  +.|+....
T Consensus       208 ll~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~--h~~~~~~~  276 (293)
T cd06647         208 MVEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ--HPFLKIAK  276 (293)
T ss_pred             HHhCCCCCCCCChhhheeehh-cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc--CHHHhcCc
Confidence            999999998765433322111 11222  234457888999999999999999999999999  77766444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=3e-23  Score=157.10  Aligned_cols=132  Identities=27%  Similarity=0.574  Sum_probs=98.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.++|+|||+++.....   .......|+..|++||.+..      ....++.++|+||+|+++
T Consensus       130 ~H~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~~~Dv~slG~~l  202 (272)
T cd06629         130 LHRDLKADNLLVDAD-GICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHS------YSQGYSAKVDIWSLGCVV  202 (272)
T ss_pred             eecCCChhhEEEcCC-CeEEEeeccccccccccccccccccccCCccccCHHHhcc------ccCCCCccchhHHHHHHH
Confidence            699999999999966 78999999998754321   11223467889999998753      123478899999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCC----CCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE----DISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |++++|..||.....................+.    .++..+.+++.+||..+|.+||++.++++
T Consensus       203 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         203 LEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             HHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            999999999976554433322221222222232    45889999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.90  E-value=1.8e-23  Score=176.84  Aligned_cols=130  Identities=31%  Similarity=0.515  Sum_probs=93.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-------------------ccccccCCCCccceeccccccccccccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-------------------VTEMMTAETGTYRWMAPELYSTVTLRQGEK   61 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~   61 (198)
                      |||||||.||+|+.+ ++|||+|||++....                   .....+..+||..|+|||++.+..     .
T Consensus       719 IHRDLKP~NIFLd~~-~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~-----~  792 (1351)
T KOG1035|consen  719 IHRDLKPRNIFLDSR-NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS-----S  792 (1351)
T ss_pred             eeccCCcceeEEcCC-CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc-----c
Confidence            799999999999966 789999999997411                   001234568999999999986521     2


Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCC---CCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 029154           62 KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL---PEDISPDLAFIVQSCWVEDPNLRPSFSQII  138 (198)
Q Consensus        62 ~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l  138 (198)
                      ..|+.|+|+||+|++++||+.   ||............+.....|..   .....+....+|+++++.||++||||.|+|
T Consensus       793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL  869 (1351)
T KOG1035|consen  793 NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELL  869 (1351)
T ss_pred             ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence            368999999999999999984   36543332222232222222211   222345668899999999999999999998


Q ss_pred             H
Q 029154          139 R  139 (198)
Q Consensus       139 ~  139 (198)
                      +
T Consensus       870 ~  870 (1351)
T KOG1035|consen  870 N  870 (1351)
T ss_pred             h
Confidence            7

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=1.2e-23  Score=180.47  Aligned_cols=133  Identities=19%  Similarity=0.218  Sum_probs=91.0

Q ss_pred             CCCCCCCCCeEEcCC------------------CCceEEecccCcccCccc-----------------ccccCCCCccce
Q 029154            1 MGKFMKEDNLLLTPD------------------QKSLKLADFGLAREETVT-----------------EMMTAETGTYRW   45 (198)
Q Consensus         1 iH~dlKp~NIll~~~------------------~~~~kl~DfGla~~~~~~-----------------~~~~~~~gt~~y   45 (198)
                      |||||||+||||+..                  ...+|++|||+++.....                 ......+||+.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            799999999999532                  235677788877632110                 000123578899


Q ss_pred             ecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcc
Q 029154           46 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV  125 (198)
Q Consensus        46 ~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~  125 (198)
                      +|||++.+        ..++.++|||||||++|||++|..|+........   .......+.......+...+++.+||.
T Consensus       182 ~APE~~~~--------~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~  250 (793)
T PLN00181        182 TSPEEDNG--------SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMS---SLRHRVLPPQILLNWPKEASFCLWLLH  250 (793)
T ss_pred             EChhhhcc--------CCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHH---HHHHhhcChhhhhcCHHHHHHHHHhCC
Confidence            99999854        5678999999999999999999888754222111   111111111111234567789999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHh
Q 029154          126 EDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       126 ~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      .+|.+||++.++++  +.|+.
T Consensus       251 ~~P~~Rps~~eil~--h~~~~  269 (793)
T PLN00181        251 PEPSCRPSMSELLQ--SEFIN  269 (793)
T ss_pred             CChhhCcChHHHhh--chhhh
Confidence            99999999999998  55554

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.8e-23  Score=156.72  Aligned_cols=129  Identities=27%  Similarity=0.478  Sum_probs=102.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.++|+|||+++.....    .......++..|++||.+.+        ..++.++|+||||++
T Consensus       128 ~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  198 (264)
T cd06653         128 VHRDIKGANILRDSA-GNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG--------EGYGRKADVWSVACT  198 (264)
T ss_pred             ecCCCCHHHEEEcCC-CCEEECccccccccccccccCccccccCCcccccCHhhhcC--------CCCCccccHHHHHHH
Confidence            699999999999966 67999999999743211    11223468889999998753        456789999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +|++++|+.||..................+.+|..+++.+.+++.+||. ++..||++.+++.
T Consensus       199 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         199 VVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            9999999999987665544444433444566788899999999999998 5799999998877

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.90  E-value=2.8e-23  Score=160.45  Aligned_cols=140  Identities=24%  Similarity=0.412  Sum_probs=99.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--------cccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      +||||||+||+++.+ +.+||+|||.+.......        ......++..|++||++..      ....++.++|+||
T Consensus       123 vH~dlk~~Nili~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~~Diws  195 (314)
T cd08216         123 IHRSVKASHILLSGD-GKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQ------NLQGYNEKSDIYS  195 (314)
T ss_pred             ecCCCCcceEEEecC-CceEEecCccceeeccccccccccccccccccccccccCHHHhcC------CCCCCCcchhHHH
Confidence            699999999999966 679999999886332111        1123456778999998753      1245788999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCC--------------------------------CCCCCCCcHHHHHHH
Q 029154           73 FGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--------------------------------PGLPEDISPDLAFIV  120 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------------------~~~p~~~~~~~~~l~  120 (198)
                      +|+++||+++|..||..................                                ......+++++.+++
T Consensus       196 ~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  275 (314)
T cd08216         196 VGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFV  275 (314)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHH
Confidence            999999999999999865543322221111000                                000112346788999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          121 QSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      .+||..||++||+++++++  +.++....
T Consensus       276 ~~~l~~~P~~Rpt~~~ll~--~p~~~~~~  302 (314)
T cd08216         276 ELCLQRDPESRPSASQLLN--HSFFKQCK  302 (314)
T ss_pred             HHHhhcCCCcCcCHHHHhc--CchHhhhc
Confidence            9999999999999999999  77766544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.90  E-value=4.4e-23  Score=159.49  Aligned_cols=135  Identities=30%  Similarity=0.493  Sum_probs=102.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.....   .....|+..|++||++...     ....++.++|+||||+++|++
T Consensus       143 ~H~dl~p~nili~~~-~~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~-----~~~~~~~~sDv~slGvil~el  213 (313)
T cd06633         143 IHRDIKAGNILLTEP-GQVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAM-----DEGQYDGKVDVWSLGITCIEL  213 (313)
T ss_pred             ecCCCChhhEEECCC-CCEEEeecCCCcccCC---CCCccccccccChhhcccc-----CCCCCCchhhHHHHHHHHHHH
Confidence            699999999999976 6799999999864321   2345688899999987421     124578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||.................+......++..+.+++.+||+.+|.+||++.+++.  +.++.
T Consensus       214 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~--~~~~~  277 (313)
T cd06633         214 AERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR--HDFVR  277 (313)
T ss_pred             HhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc--CcccC
Confidence            99999998766544443333222222233457788999999999999999999999998  55544

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.90  E-value=3.1e-24  Score=161.17  Aligned_cols=131  Identities=31%  Similarity=0.519  Sum_probs=97.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC-cccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||.+... ..........++..|+|||++..       ...++.++|+||+|+++|+
T Consensus       120 ~H~dikp~NIl~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~il~~  191 (260)
T PF00069_consen  120 VHRDIKPENILLDEN-GEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQ-------GKKYTRKSDIWSLGIILYE  191 (260)
T ss_dssp             EESSBSGGGEEESTT-SEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTT-------TSSBSTHHHHHHHHHHHHH
T ss_pred             ccccccccccccccc-cccccccccccccccccccccccccccccccccccccc-------ccccccccccccccccccc
Confidence            599999999999965 77999999998742 22333455678999999999751       3567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHH--HHHHHc-c--CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAA--YAAAFK-H--ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~--~~~~~~-~--~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |++|..||.........  ...... .  ............+.+++.+||..||++||++.++++
T Consensus       192 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  192 LLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             ccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999876321211  111111 0  001111223489999999999999999999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.90  E-value=2.1e-23  Score=157.85  Aligned_cols=131  Identities=23%  Similarity=0.403  Sum_probs=100.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+++.++|+|||++......   ....++..|+|||++.+        ..++.++|+||+|+++|++
T Consensus       131 ~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~il~~l  199 (267)
T PHA03390        131 IHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKG--------HNYDVSFDWWAVGVLTYEL  199 (267)
T ss_pred             eeCCCCHHHEEEeCCCCeEEEecCccceecCCC---ccCCCCCcccChhhhcC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999977448999999998754332   23467889999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHH---HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-FSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-~~~~l~~l~~~~  145 (198)
                      ++|..||........   ...... ......+..+++.+.+++.+||+.+|.+|++ ++++++  +.|+
T Consensus       200 ~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~--h~~~  265 (267)
T PHA03390        200 LTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK--HPFL  265 (267)
T ss_pred             HHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc--CCcc
Confidence            999999975432211   111111 2333445578999999999999999999995 699987  5443

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.90  E-value=3e-23  Score=157.76  Aligned_cols=135  Identities=24%  Similarity=0.450  Sum_probs=100.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.++|+|||++........    .....++..|++||.+..        ..++.++|+||||++
T Consensus       131 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--------~~~~~~~Di~slG~~  201 (284)
T cd05038         131 IHRDLAARNILVESE-DLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRT--------SKFSSASDVWSFGVT  201 (284)
T ss_pred             ecCCCCHHhEEEcCC-CCEEEcccccccccccCCcceeccCCCCCcccccCcHHHcc--------CCCCcccchHHHhhh
Confidence            699999999999976 6799999999975442111    112234567999998743        467889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHH--------------HHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQ--------------AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ++||++|..|+.......              ..............+..++.++.+++.+||..+|.+||++.+++++|+
T Consensus       202 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~  281 (284)
T cd05038         202 LYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD  281 (284)
T ss_pred             hheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence            999999998875432111              111122223333445667889999999999999999999999999987


Q ss_pred             HH
Q 029154          143 AF  144 (198)
Q Consensus       143 ~~  144 (198)
                      .+
T Consensus       282 ~i  283 (284)
T cd05038         282 RL  283 (284)
T ss_pred             hc
Confidence            64

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.90  E-value=4.1e-23  Score=157.19  Aligned_cols=131  Identities=28%  Similarity=0.405  Sum_probs=96.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.++|+|||++...... .......++..|++||++.+       ...++.++|+||+|+++|+
T Consensus       121 ~H~dl~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~~Di~slG~~l~~  192 (283)
T cd07835         121 LHRDLKPQNLLIDRE-GALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-------SRQYSTPVDIWSIGCIFAE  192 (283)
T ss_pred             eCCCCCHHHEEEcCC-CcEEEeecccccccCCCccccCccccccCCCCCceeec-------CcccCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998754322 12233456889999998753       2346889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC-----------------------C----CCCCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA-----------------------R----PGLPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------~----~~~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      +++|..||.+...............                       .    ......++..+.+++.+||+.||.+||
T Consensus       193 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  272 (283)
T cd07835         193 MVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI  272 (283)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc
Confidence            9999999987654332222111000                       0    011234678899999999999999999


Q ss_pred             CHHHHHH
Q 029154          133 SFSQIIR  139 (198)
Q Consensus       133 s~~~~l~  139 (198)
                      ++.++++
T Consensus       273 t~~~il~  279 (283)
T cd07835         273 SAKAALQ  279 (283)
T ss_pred             CHHHHhc
Confidence            9999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.89  E-value=5.2e-23  Score=158.42  Aligned_cols=133  Identities=25%  Similarity=0.366  Sum_probs=96.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----------------cccCCCCccceecccccccccccccccCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----------------MMTAETGTYRWMAPELYSTVTLRQGEKKHY   64 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~   64 (198)
                      +||||||+||+++.+ +.+||+|||+++....+.                ......++..|++||.+..        ..+
T Consensus       123 ~H~dl~p~NIll~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~  193 (305)
T cd05609         123 VHRDLKPDNLLITSM-GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR--------QGY  193 (305)
T ss_pred             cccCCchHHEEECCC-CCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC--------CCC
Confidence            699999999999966 679999999986321100                0112357788999998743        567


Q ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccC-CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        65 ~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +.++|+||||+++|++++|..||.+............... .+.....++.++.+++.+||..||.+||++.++.+.|+
T Consensus       194 ~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         194 GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence            8999999999999999999999987654332222222211 12222357899999999999999999998655544443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.89  E-value=4.1e-23  Score=157.32  Aligned_cols=131  Identities=29%  Similarity=0.441  Sum_probs=96.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++...... .......++..|++||++.+       ...++.++|+||||+++|+
T Consensus       122 ~h~~l~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slG~~l~e  193 (286)
T cd07846         122 IHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVG-------DTKYGRAVDIWAVGCLVTE  193 (286)
T ss_pred             cccCCCHHHEEECCC-CcEEEEeeeeeeeccCCccccCcccceeeccCcHHhcc-------ccccCchHhHHHHHHHHHH
Confidence            699999999999976 67999999998754322 22334568889999998753       2446789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHH--cc------------------CCC---------CCCCCCcHHHHHHHHHhcccCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAF--KH------------------ARP---------GLPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~--~~------------------~~~---------~~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      +++|.+||.+............  ..                  ..+         .....++..+.+++.+||..+|.+
T Consensus       194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  273 (286)
T cd07846         194 MLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDD  273 (286)
T ss_pred             HHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCccc
Confidence            9999999976554322111110  00                  000         012346788999999999999999


Q ss_pred             CCCHHHHHH
Q 029154          131 RPSFSQIIR  139 (198)
Q Consensus       131 Rps~~~~l~  139 (198)
                      ||++.++++
T Consensus       274 Rp~~~~il~  282 (286)
T cd07846         274 RPSSSQLLH  282 (286)
T ss_pred             chhHHHHhc
Confidence            999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.89  E-value=2.6e-23  Score=156.70  Aligned_cols=130  Identities=28%  Similarity=0.509  Sum_probs=98.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-----ccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +|+||||+||+++.+ +.++|+|||++........     .....|+..|++||.+..       ...++.++|+||||+
T Consensus       124 ~h~~l~p~ni~~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-------~~~~~~~~Dv~slG~  195 (267)
T cd06610         124 IHRDIKAGNILLGED-GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQ-------VHGYDFKADIWSFGI  195 (267)
T ss_pred             ecCCCCHHhEEEcCC-CCEEEcccchHHHhccCccccccccccccCChhhcChHHHcc-------ccCcCcccchHhHhH
Confidence            699999999999976 6799999999864432211     123468889999998753       235788999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC-----CCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP-----EDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|+|++|..||.......... .......+..+     ..+++.+.+++.+||..||.+||++.++++
T Consensus       196 i~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         196 TAIELATGAAPYSKYPPMKVLM-LTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHHHhCCCCccccChhhhHH-HHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            9999999999997665433222 22222222222     246788999999999999999999999988

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.89  E-value=1.7e-23  Score=172.58  Aligned_cols=145  Identities=17%  Similarity=0.173  Sum_probs=93.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc--cccccCCCCccceecccccccccccccc--------------cCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV--TEMMTAETGTYRWMAPELYSTVTLRQGE--------------KKHY   64 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~--------------~~~~   64 (198)
                      |||||||+|||++.+.+.+||+|||+++....  .......++++.|+|||.+.........              ...+
T Consensus       277 iHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~  356 (566)
T PLN03225        277 VHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL  356 (566)
T ss_pred             EeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence            69999999999986556899999999974322  1222456789999999976431100000              0124


Q ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHc----------cCCCCC----------CCCCcHHHHHHHHHhc
Q 029154           65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK----------HARPGL----------PEDISPDLAFIVQSCW  124 (198)
Q Consensus        65 ~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~----------~~~~~~----------p~~~~~~~~~l~~~~l  124 (198)
                      +.++||||+||++|||+++..++..  ...........          ......          .+......++|+.+||
T Consensus       357 ~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL  434 (566)
T PLN03225        357 PDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM  434 (566)
T ss_pred             CCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence            4567999999999999987665432  11111111000          000000          1112334568999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          125 VEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       125 ~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ..||.+|||+.++++  |.|+....
T Consensus       435 ~~dP~kR~ta~e~L~--Hpff~~~~  457 (566)
T PLN03225        435 RFKGRQRISAKAALA--HPYFDREG  457 (566)
T ss_pred             cCCcccCCCHHHHhC--CcCcCCCC
Confidence            999999999999999  77765433

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.89  E-value=6.3e-23  Score=157.17  Aligned_cols=139  Identities=30%  Similarity=0.507  Sum_probs=104.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++....... ......|+..|++||.+..        ..++.++|+||+|+++|+
T Consensus       138 vH~dl~p~Nilv~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--------~~~~~~~Dv~slGvil~e  208 (292)
T cd06657         138 IHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR--------LPYGPEVDIWSLGIMVIE  208 (292)
T ss_pred             ecCCCCHHHEEECCC-CCEEEcccccceecccccccccccccCccccCHHHhcC--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 679999999886433221 1233567889999998743        456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      +++|..||.+....... .......+.  .....+++.+.+++.+||..+|.+||++.++++  +.|+.....+
T Consensus       209 l~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~--~~~~~~~~~~  279 (292)
T cd06657         209 MVDGEPPYFNEPPLKAM-KMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGPP  279 (292)
T ss_pred             HHhCCCCCCCCCHHHHH-HHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc--ChHHhccCCC
Confidence            99999999875543322 111111222  123457889999999999999999999999999  7787766643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.89  E-value=4.1e-23  Score=157.91  Aligned_cols=126  Identities=28%  Similarity=0.449  Sum_probs=101.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||+++.....  .....|++.|++||.+..        ...+.++|+||+|+++|++
T Consensus       123 ~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l  191 (290)
T cd05580         123 VYRDLKPENLLLDSD-GYIKITDFGFAKRVKGR--TYTLCGTPEYLAPEIILS--------KGYGKAVDWWALGILIYEM  191 (290)
T ss_pred             ecCCCCHHHEEECCC-CCEEEeeCCCccccCCC--CCCCCCCccccChhhhcC--------CCCCccccHHHHHHHHHHH
Confidence            699999999999976 67999999998765433  234568899999998753        4567889999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      ++|..||........ ... .......+|..+++.+.+++.+||..||.+|+     +++++++
T Consensus       192 ~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         192 LAGYPPFFDDNPIQI-YEK-ILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HhCCCCCCCCCHHHH-HHH-HhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            999999987653222 222 22445567778899999999999999999998     7788876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.89  E-value=3.1e-23  Score=157.94  Aligned_cols=130  Identities=25%  Similarity=0.326  Sum_probs=96.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.............++..|++||.+.+        ..++.++|+||+|+++|+|
T Consensus       129 ~h~~l~~~nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------~~~~~~~Di~s~G~~l~~l  199 (287)
T cd07838         129 VHRDLKPQNILVTSD-GQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQ--------SSYATPVDMWSVGCIFAEL  199 (287)
T ss_pred             eeccCChhhEEEccC-CCEEEeccCcceeccCCcccccccccccccChHHhcc--------CCCCCcchhhhHHHHHHHH
Confidence            699999999999977 7899999999876543333334457889999998753        4578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC------------------C-------CCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR------------------P-------GLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~------------------~-------~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|.+||.+................                  .       .....+++.+.+++.+||..||.+||++.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~  279 (287)
T cd07838         200 FRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAF  279 (287)
T ss_pred             HhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHH
Confidence            9999999876543322211110000                  0       00112457788999999999999999999


Q ss_pred             HHHH
Q 029154          136 QIIR  139 (198)
Q Consensus       136 ~~l~  139 (198)
                      +++.
T Consensus       280 ~il~  283 (287)
T cd07838         280 EALQ  283 (287)
T ss_pred             HHhc
Confidence            9987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.7e-23  Score=162.95  Aligned_cols=139  Identities=21%  Similarity=0.363  Sum_probs=97.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||++........  ....+||+.|+|||++....   .....++.++|+||+||++|
T Consensus       124 vH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~~~DiwslG~~l~  199 (331)
T cd05597         124 VHRDIKPDNVLLDKN-GHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAME---DGKGRYGPECDWWSLGVCMY  199 (331)
T ss_pred             EECCCCHHHEEECCC-CCEEEEECCceeecCCCCCccccceeccccccCHHHHhhcc---ccccCCCCcceeehhhhHHH
Confidence            699999999999876 6799999999864332221  12246899999999975210   01245678999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC---CCCcHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP---EDISPDLAFIVQSCWVEDPNL--RPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~~l~~~~  145 (198)
                      +|++|+.||.+..................++   ..+++++.+++.+|+..++..  |+++.++++  +.|+
T Consensus       200 el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~--hp~~  269 (331)
T cd05597         200 EMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD--HPFF  269 (331)
T ss_pred             HHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc--CCCC
Confidence            9999999998765433322222112222222   347899999999988654443  789999998  5554

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.89  E-value=9.9e-23  Score=154.77  Aligned_cols=134  Identities=30%  Similarity=0.517  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++....... ......++..|++||.+..        ..++.++|+||+|+++|+
T Consensus       123 ~h~dl~p~Ni~i~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Dv~slG~~l~~  193 (277)
T cd06641         123 IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--------SAYDSKADIWSLGITAIE  193 (277)
T ss_pred             ecCCCCHHhEEECCC-CCEEEeecccceecccchhhhccccCCccccChhhhcc--------CCCCchhhHHHHHHHHHH
Confidence            599999999999966 679999999986543221 1233467889999998743        456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..||......... ........+.++..++.++.+++.+||..+|.+||++.++++  +.++.
T Consensus       194 l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~--~~~~~  257 (277)
T cd06641         194 LAKGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK--HKFIV  257 (277)
T ss_pred             HHcCCCCCCccchHHHH-HHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh--CHHHh
Confidence            99999999765543222 222334445566778999999999999999999999999999  55544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.89  E-value=8e-24  Score=164.84  Aligned_cols=135  Identities=21%  Similarity=0.349  Sum_probs=96.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||+++.......  ....+||+.|+|||++.+..   .....++.++|+||+|+++|
T Consensus       124 iHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~~~DiwSlGvil~  199 (331)
T cd05624         124 VHRDIKPDNVLLDMN-GHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAME---DGMGKYGPECDWWSLGVCMY  199 (331)
T ss_pred             eeccCchHHEEEcCC-CCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccc---cCCCCCCCcccEEeeehhhh
Confidence            699999999999966 6799999999875432221  12357999999999875310   01135678999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC---CCCcHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP---EDISPDLAFIVQSCWVEDPNL--RPSFSQIIR  139 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~  139 (198)
                      +|++|+.||.+..................+|   ..+++++.+++.+||..++.+  |++++++++
T Consensus       200 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         200 EMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             hhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            9999999998765443332222222223333   346899999999999876544  357888887

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.89  E-value=1.2e-22  Score=154.45  Aligned_cols=131  Identities=30%  Similarity=0.421  Sum_probs=97.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.++|+|||++.............++..|++||++..       ...++.++|+||||++++++
T Consensus       121 ~H~dl~~~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~~Di~s~G~~l~el  192 (283)
T cd07830         121 FHRDLKPENLLVSGP-EVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLR-------STSYSSPVDIWALGCIMAEL  192 (283)
T ss_pred             ccCCCChhhEEEcCC-CCEEEeecccceeccCCCCcCCCCCcccccCceeeec-------CcCcCCccchhhHHHHHHHH
Confidence            699999999999976 6799999999976544333445678889999998743       24568899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccC-----------------CCC-----------CCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHA-----------------RPG-----------LPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~-----------~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      ++|..||.................                 ...           .....+.++.+++.+||..||.+||
T Consensus       193 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  272 (283)
T cd07830         193 YTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRP  272 (283)
T ss_pred             HhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCC
Confidence            999999976554332211110000                 000           0112357899999999999999999


Q ss_pred             CHHHHHH
Q 029154          133 SFSQIIR  139 (198)
Q Consensus       133 s~~~~l~  139 (198)
                      ++.|++.
T Consensus       273 t~~ei~~  279 (283)
T cd07830         273 TASQALQ  279 (283)
T ss_pred             CHHHHhh
Confidence            9999987

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.89  E-value=4.4e-23  Score=161.41  Aligned_cols=138  Identities=27%  Similarity=0.393  Sum_probs=101.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++......  .....++..|++||.+.+       ...++.++|+||+|+++|++
T Consensus       140 ~H~dlkp~Nill~~~-~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~-------~~~~~~~~DvwslGv~l~el  209 (343)
T cd07851         140 IHRDLKPSNIAVNED-CELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLN-------WMHYNQTVDIWSVGCIMAEL  209 (343)
T ss_pred             ecCCCCHHHeEECCC-CCEEEcccccccccccc--ccCCcccccccCHHHHhC-------CCCCCchHhHHHHHHHHHHH
Confidence            699999999999976 67999999998754332  234567889999998743       23567899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCC-----------------------------CCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARP-----------------------------GLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+................+                             ......++++.+++.+||..||.+|
T Consensus       210 ltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~R  289 (343)
T cd07851         210 LTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKR  289 (343)
T ss_pred             HhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhC
Confidence            99999998665433221111100000                             0112357889999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCC
Q 029154          132 PSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~  150 (198)
                      ||+.++++  +.|+.....
T Consensus       290 pt~~ell~--h~~~~~~~~  306 (343)
T cd07851         290 ITAAEALA--HPYLAEYHD  306 (343)
T ss_pred             CCHHHHhc--CCCccccCC
Confidence            99999998  676654433

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.89  E-value=1.1e-22  Score=152.45  Aligned_cols=128  Identities=29%  Similarity=0.493  Sum_probs=103.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++...... ......++..|++||.+.+        ..++.++|+||+|+++|++
T Consensus       125 ~h~~l~~~ni~~~~~-~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~--------~~~~~~~D~~slG~~~~~l  194 (256)
T cd08530         125 LHRDLKSANILLVAN-DLVKIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKG--------RPYSYKSDIWSLGCLLYEM  194 (256)
T ss_pred             ccCCCCcceEEEecC-CcEEEeeccchhhhccC-CcccccCCccccCHHHHCC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 67999999998755433 2334567889999999753        5577899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|+.||........ .........+.++..++.++.+++.+||..+|.+||++.++++
T Consensus       195 ~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         195 ATFAPPFEARSMQDL-RYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HhCCCCCCCCCHHHH-HHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            999999987664332 2233334445566678899999999999999999999999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.89  E-value=5.1e-23  Score=156.44  Aligned_cols=131  Identities=31%  Similarity=0.403  Sum_probs=97.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||.+....... ......++..|++||.+.+       ...++.++|+||+|+++|+
T Consensus       120 ~H~dl~p~nili~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-------~~~~~~~~Di~slG~~l~~  191 (283)
T cd05118         120 LHRDLKPENLLINTE-GVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLG-------DKGYSTPVDIWSVGCIFAE  191 (283)
T ss_pred             eecCcCHHHEEECCC-CcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhc-------CCCCCchhHHHHHHHHHHH
Confidence            699999999999976 679999999987543322 2333567889999998753       2367889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC----------------------------CCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR----------------------------PGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      +++|+.||.+................                            ......++.++.+++.+||..||.+|
T Consensus       192 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  271 (283)
T cd05118         192 LLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKR  271 (283)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccC
Confidence            99999999776543322111110000                            00112367889999999999999999


Q ss_pred             CCHHHHHH
Q 029154          132 PSFSQIIR  139 (198)
Q Consensus       132 ps~~~~l~  139 (198)
                      |++.+++.
T Consensus       272 p~~~~ll~  279 (283)
T cd05118         272 ITAEQALA  279 (283)
T ss_pred             cCHHHHhh
Confidence            99999987

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=5.5e-23  Score=154.64  Aligned_cols=133  Identities=24%  Similarity=0.303  Sum_probs=98.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||+|+||+++.+ +.+||+|||++.....   .....++..|++||.+.+        ..++.++|+||+|+++|++
T Consensus       119 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~---~~~~~~~~~y~~pe~~~~--------~~~~~~~Dv~slG~il~~l  186 (260)
T cd05611         119 IHRDIKPENLLIDQT-GHLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILG--------VGDDKMSDWWSLGCVIFEF  186 (260)
T ss_pred             ecCCCCHHHeEECCC-CcEEEeecccceeccc---cccCCCCcCccChhhhcC--------CCCcchhhhHHHHHHHHHH
Confidence            699999999999976 6799999999875332   223467889999998753        4478899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHcc--CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH-HHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKH--ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML-NAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l-~~~~  145 (198)
                      ++|..||................  ........++.++.+++.+||..+|++||++.++.+.| +.|+
T Consensus       187 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~  254 (260)
T cd05611         187 LFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFF  254 (260)
T ss_pred             HHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHh
Confidence            99999998765433222211111  12233446789999999999999999999765444433 3443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.89  E-value=7.4e-23  Score=153.21  Aligned_cols=129  Identities=36%  Similarity=0.571  Sum_probs=103.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.++|+|||++....... ......|+..|++||....        ..++.++|+||+|+++++
T Consensus       125 ~H~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--------~~~~~~~Dv~slG~~~~~  195 (258)
T cd08215         125 LHRDIKPQNIFLTSN-GLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQN--------KPYNYKSDIWSLGCVLYE  195 (258)
T ss_pred             ecccCChHHeEEcCC-CcEEECCccceeecccCcceecceeeeecccChhHhcc--------CCCCccccHHHHHHHHHH
Confidence            599999999999966 679999999987543332 2234568889999998743        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||...... .............++..++.++.+++.+||..+|++||++.++++
T Consensus       196 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         196 LCTLKHPFEGENLL-ELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHcCCCCCCCCcHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            99999999765532 223333444555667788999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.89  E-value=2.8e-23  Score=154.15  Aligned_cols=134  Identities=27%  Similarity=0.405  Sum_probs=103.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+||++..+ ..+||.|||+++.....-..+..+.|..|.|||++.+        ..|...+||||.||++.||
T Consensus       140 ihRdLkPsnivv~~~-~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~--------~~~ke~vdiwSvGci~gEl  210 (369)
T KOG0665|consen  140 IHRDLKPSNIVVNSD-CTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEL  210 (369)
T ss_pred             eecccCcccceecch-hheeeccchhhcccCcccccCchhheeeccCchheec--------cCCcccchhhhhhhHHHHH
Confidence            699999999999977 7899999999997766545667889999999999875        3488999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCC-----------------------------CCCCC-----------CcHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARP-----------------------------GLPED-----------ISPDLAFIV  120 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~p~~-----------~~~~~~~l~  120 (198)
                      ++|+..|.|....++-.........+                             .+|+.           -...+++++
T Consensus       211 i~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll  290 (369)
T KOG0665|consen  211 ILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLL  290 (369)
T ss_pred             hhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHH
Confidence            99999998776554432211111110                             01111           123478999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHHH
Q 029154          121 QSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      .+||..||++|.+++++|.  |..+
T Consensus       291 ~~MLvi~pe~Risv~daL~--HPY~  313 (369)
T KOG0665|consen  291 SKMLVIDPEKRISVDDALR--HPYI  313 (369)
T ss_pred             HHhhccChhhcccHHHHhc--CCee
Confidence            9999999999999999999  5444

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.89  E-value=4.9e-23  Score=154.12  Aligned_cols=130  Identities=29%  Similarity=0.512  Sum_probs=103.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||+|+||+++.+ +.++|+|||.+........   .....++..|++||.+..        ..++.++|+||+|+++
T Consensus       123 ~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--------~~~~~~~Dv~slG~il  193 (260)
T cd06606         123 VHRDIKGANILVDSD-GVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG--------EEYGRAADIWSLGCTV  193 (260)
T ss_pred             cccCCCHHHEEEcCC-CCEEEcccccEEecccccccccccCCCCCccccCHhhhcC--------CCCCchhhHHHHHHHH
Confidence            699999999999976 6799999999875544332   334568889999998753        4478899999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHH-HccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAA-FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++++|..||............. .....+..+...+..+.+++.+||..+|.+||++.++++
T Consensus       194 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         194 IEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            99999999997765322222222 123445667778999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.89  E-value=1e-22  Score=158.74  Aligned_cols=139  Identities=26%  Similarity=0.315  Sum_probs=100.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---------------cccccCCCCccceecccccccccccccccCCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---------------TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN   65 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~   65 (198)
                      +|+||||+||+++.+ +.+||+|||++.....               ........++..|++||.+.+       ...++
T Consensus       141 ~H~dl~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~  212 (335)
T PTZ00024        141 MHRDLSPANIFINSK-GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG-------AEKYH  212 (335)
T ss_pred             ecccccHHHeEECCC-CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc-------CCCCC
Confidence            699999999999976 6799999999874431               111122356788999998753       23468


Q ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHH--ccCCC------------------------CCCCCCcHHHHHH
Q 029154           66 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF--KHARP------------------------GLPEDISPDLAFI  119 (198)
Q Consensus        66 ~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~--~~~~~------------------------~~p~~~~~~~~~l  119 (198)
                      .++|+||+|+++|++++|..||.+............  .....                        ......+.++.++
T Consensus       213 ~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  292 (335)
T PTZ00024        213 FAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDL  292 (335)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHH
Confidence            899999999999999999999987665433211111  00000                        0012346788999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          120 VQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       120 ~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +.+||..+|++||++++++.  +.|+....
T Consensus       293 i~~~l~~~P~~R~s~~~~l~--~~~~~~~~  320 (335)
T PTZ00024        293 LQSLLKLNPLERISAKEALK--HEYFKSDP  320 (335)
T ss_pred             HHHHcCCCchhccCHHHHhc--CcccCCCC
Confidence            99999999999999999998  77765443

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.89  E-value=5.9e-23  Score=159.71  Aligned_cols=141  Identities=27%  Similarity=0.449  Sum_probs=97.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---c--cc---cCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---E--MM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~--~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||++.+ +.++++||+.+......   .  ..   ....++..|++||++.+      ....++.++|+||
T Consensus       123 vHrDlkp~Nill~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~~Diws  195 (328)
T cd08226         123 IHRNIKASHILISGD-GLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQ------DLYGYNVKSDIYS  195 (328)
T ss_pred             ecCCCCHHHEEEeCC-CcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcC------CCCCCCchhhHHH
Confidence            699999999999976 67999999865321110   0  00   01134567999999753      2245788999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCcHHHHHHHHHccC---------------------------------------------CCC
Q 029154           73 FGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA---------------------------------------------RPG  107 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~---------------------------------------------~~~  107 (198)
                      +||++|++++|..||.+...............                                             ...
T Consensus       196 lG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (328)
T cd08226         196 VGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP  275 (328)
T ss_pred             HHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccch
Confidence            99999999999999987654333222111000                                             001


Q ss_pred             CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154          108 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       108 ~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      .+..+++.+.+|+.+||..||.+|||+.++++  +.|+.....
T Consensus       276 ~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~--~~~~~~~~~  316 (328)
T cd08226         276 SSKTFSPAFQNLVELCLQQDPEKRPSASSLLS--HAFFKQVKE  316 (328)
T ss_pred             hhhhhhHHHHHHHHHHccCCcccCCCHHHHhh--CHHHHHHHH
Confidence            12235677899999999999999999999998  767655443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.89  E-value=9.8e-23  Score=155.42  Aligned_cols=135  Identities=36%  Similarity=0.618  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++...... .......++..|++||.+.+        ..++.++|+||||+++|+
T Consensus       138 ~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Dv~slGvil~~  208 (286)
T cd06614         138 IHRDIKSDNILLSKD-GSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKR--------KDYGPKVDIWSLGIMCIE  208 (286)
T ss_pred             eeCCCChhhEEEcCC-CCEEECccchhhhhccchhhhccccCCcccCCHhHhcC--------CCCCCccccHHHHHHHHH
Confidence            599999999999966 67999999987643221 11223457889999998743        457889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +++|..||............. ....+..  +..++.++.+++.+||+.+|.+||++.++++  +.++..
T Consensus       209 l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~--~~~~~~  275 (286)
T cd06614         209 MAEGEPPYLREPPLRALFLIT-TKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ--HPFLKK  275 (286)
T ss_pred             HHhCCCCCCCCCHHHHHHHHH-hcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh--ChHhhc
Confidence            999999998765543332222 2222222  2337889999999999999999999999998  666554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.89  E-value=8.2e-23  Score=154.23  Aligned_cols=131  Identities=27%  Similarity=0.489  Sum_probs=100.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +|+||||+||+++.++..+||+|||++.......     ......|+..|++||.+.+        ..++.++|+||+|+
T Consensus       125 ~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------~~~~~~~Dv~slG~  196 (268)
T cd06630         125 IHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG--------EQYGRSCDVWSVGC  196 (268)
T ss_pred             ecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhcc--------CCCCcccchHHHHH
Confidence            6999999999998664569999999986443211     1123467889999998753        45788999999999


Q ss_pred             HHHHHHcCCCCCCCCCcH---HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           76 VLWELLTNRLPFEGMSNL---QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++++++|..||......   ............+..+..+++++.+++.+||..+|++||++.++++
T Consensus       197 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         197 VIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            999999999999644321   1111122223445667778999999999999999999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.89  E-value=3.9e-23  Score=155.32  Aligned_cols=130  Identities=25%  Similarity=0.389  Sum_probs=101.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.++|+|||++.............|+..|++||.+..        ..++.++|+||+|+++|++
T Consensus       122 ~h~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--------~~~~~~~Di~slG~~l~~l  192 (258)
T cd05578         122 IHRDIKPDNILLDEQ-GHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCR--------QGYSVAVDWWSLGVTAYEC  192 (258)
T ss_pred             eccCCCHHHeEEcCC-CCEEEeecccccccCCCccccccCCChhhcCHHHHcc--------cCCCCcccchhhHHHHHHH
Confidence            699999999999976 6799999999875543333344568889999998753        4478899999999999999


Q ss_pred             HcCCCCCCCCCcH-HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH--HHHHH
Q 029154           81 LTNRLPFEGMSNL-QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF--SQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~--~~~l~  139 (198)
                      ++|..||...... ...............|..++.++.+++.+||..||.+||++  +++++
T Consensus       193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         193 LRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            9999999866531 11122222224556677789999999999999999999999  77665

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.89  E-value=8.7e-23  Score=157.14  Aligned_cols=131  Identities=27%  Similarity=0.376  Sum_probs=94.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +|+||||+||+++.+ +.+||+|||++.......     ......++..|+|||.+.+       ...++.++|+||+|+
T Consensus       141 ~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~  212 (310)
T cd07865         141 LHRDMKAANILITKD-GILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLG-------ERDYGPPIDMWGAGC  212 (310)
T ss_pred             eccCCCHHHEEECCC-CcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcC-------CcccCchhhhHHHHH
Confidence            699999999999976 679999999987432211     1223457889999998753       234678999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHH--HHHccCCCC---------------C-------------CCCCcHHHHHHHHHhcc
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYA--AAFKHARPG---------------L-------------PEDISPDLAFIVQSCWV  125 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~--~~~~~~~~~---------------~-------------p~~~~~~~~~l~~~~l~  125 (198)
                      ++|++++|..||.+.........  ......++.               .             +...+..+.+++.+||.
T Consensus       213 ~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~  292 (310)
T cd07865         213 IMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLV  292 (310)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhc
Confidence            99999999999987654322111  111100000               0             11125677899999999


Q ss_pred             cCCCCCCCHHHHHH
Q 029154          126 EDPNLRPSFSQIIR  139 (198)
Q Consensus       126 ~dp~~Rps~~~~l~  139 (198)
                      .||.+||+++++++
T Consensus       293 ~~P~~R~t~~e~l~  306 (310)
T cd07865         293 LDPAKRIDADTALN  306 (310)
T ss_pred             CChhhccCHHHHhc
Confidence            99999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.89  E-value=4.9e-23  Score=159.01  Aligned_cols=131  Identities=22%  Similarity=0.314  Sum_probs=94.2

Q ss_pred             CCCCCCCCCeEEcC----CCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTP----DQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~----~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      +||||||+||+++.    + +.+||+|||++........    .....++..|+|||++.+       ...++.++|+||
T Consensus       130 ~h~dlkp~Nil~~~~~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~s  201 (316)
T cd07842         130 LHRDLKPANILVMGEGPER-GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG-------ARHYTKAIDIWA  201 (316)
T ss_pred             eeCCCCHHHEEEcCCCCcc-ceEEECCCccccccCCCcccccccCCccccccccCHHHHhC-------CCCCCcHHHHHH
Confidence            69999999999987    5 6799999999875432211    223467889999998753       245688999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCcHH--------HHHHHHH-------------------------ccCCCCCC----------
Q 029154           73 FGIVLWELLTNRLPFEGMSNLQ--------AAYAAAF-------------------------KHARPGLP----------  109 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~~~~~~~--------~~~~~~~-------------------------~~~~~~~p----------  109 (198)
                      ||++++++++|..||.+.....        .......                         .......+          
T Consensus       202 lG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (316)
T cd07842         202 IGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEK  281 (316)
T ss_pred             HHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHh
Confidence            9999999999999997544321        0000000                         00000111          


Q ss_pred             -CCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154          110 -EDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus       110 -~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                       ...+.++.+++.+||..||.+|||+.++++
T Consensus       282 ~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         282 HKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             ccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             145678999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.88  E-value=1e-22  Score=156.79  Aligned_cols=131  Identities=25%  Similarity=0.336  Sum_probs=94.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc------------cccCCCCccceecccccccccccccccCCCCchh
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE------------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV   68 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~   68 (198)
                      +|+||||+||+++.+ +.+||+|||+++......            ......++..|+|||.+.+       ...++.++
T Consensus       137 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~  208 (311)
T cd07866         137 LHRDIKAANILIDNQ-GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG-------ERRYTTAV  208 (311)
T ss_pred             ecCCCCHHHEEECCC-CCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC-------CCccCchh
Confidence            699999999999976 689999999987432211            1122356788999998753       24578899


Q ss_pred             hHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCC---------------------CC-------CCCCcHHHHHHH
Q 029154           69 DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP---------------------GL-------PEDISPDLAFIV  120 (198)
Q Consensus        69 Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~-------p~~~~~~~~~l~  120 (198)
                      |+||+|+++|+|++|.+||.+................+                     ..       .....+++.+++
T Consensus       209 Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  288 (311)
T cd07866         209 DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLL  288 (311)
T ss_pred             HhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHH
Confidence            99999999999999999998765433221111100000                     00       022446788999


Q ss_pred             HHhcccCCCCCCCHHHHHH
Q 029154          121 QSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~  139 (198)
                      .+||..||.+||++.+++.
T Consensus       289 ~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         289 SKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHcccCcccCcCHHHHhc
Confidence            9999999999999999987

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.88  E-value=9.6e-23  Score=155.78  Aligned_cols=131  Identities=24%  Similarity=0.444  Sum_probs=93.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||+++..... .......++..|+|||++.+       ...++.++|+||+|+++|+
T Consensus       125 ~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~~Dv~slG~il~~  196 (291)
T cd07844         125 LHRDLKPQNLLISER-GELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLG-------STEYSTSLDMWGVGCIFYE  196 (291)
T ss_pred             ecccCCHHHEEEcCC-CCEEECccccccccCCCCccccccccccccCCcHHhhc-------CcccCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999998643221 11223456788999998753       2456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC-------------------------C----CCCCCCc--HHHHHHHHHhcccCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR-------------------------P----GLPEDIS--PDLAFIVQSCWVEDP  128 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~----~~p~~~~--~~~~~l~~~~l~~dp  128 (198)
                      |++|..||.+................                         +    .....++  .++.+++.+||..+|
T Consensus       197 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p  276 (291)
T cd07844         197 MATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEP  276 (291)
T ss_pred             HHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCc
Confidence            99999999765522221111110000                         0    0001233  788899999999999


Q ss_pred             CCCCCHHHHHH
Q 029154          129 NLRPSFSQIIR  139 (198)
Q Consensus       129 ~~Rps~~~~l~  139 (198)
                      .+||++.++++
T Consensus       277 ~~Rps~~e~l~  287 (291)
T cd07844         277 KKRISAAEAMK  287 (291)
T ss_pred             ccccCHHHHhc
Confidence            99999999887

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.9e-22  Score=157.97  Aligned_cols=140  Identities=29%  Similarity=0.392  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||+++.....  .....++..|+|||.+.+       ...++.++|+||+||++|++
T Consensus       142 vH~dlkp~NIll~~~-~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~-------~~~~~~~~DvwslG~il~el  211 (345)
T cd07877         142 IHRDLKPSNLAVNED-CELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLN-------WMHYNQTVDIWSVGCIMAEL  211 (345)
T ss_pred             eecCCChHHEEEcCC-CCEEEeccccccccccc--ccccccCCCccCHHHHhC-------ccCCCchhhHHHHHHHHHHH
Confidence            699999999999976 67999999998754322  234567889999998742       24578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHc------------------------cCCCC-----CCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFK------------------------HARPG-----LPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~-----~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+.............                        ...+.     .....++++.+++.+||..||.+|
T Consensus       212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  291 (345)
T cd07877         212 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR  291 (345)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhc
Confidence            9999999765543321111000                        00000     012357889999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCCC
Q 029154          132 PSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~~~  152 (198)
                      |++.+++.  +.++.....+.
T Consensus       292 ~t~~e~l~--h~~f~~~~~~~  310 (345)
T cd07877         292 ITAAQALA--HAYFAQYHDPD  310 (345)
T ss_pred             CCHHHHhc--ChhhhhcCCCC
Confidence            99999998  77776555443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.88  E-value=2.1e-22  Score=157.61  Aligned_cols=138  Identities=25%  Similarity=0.371  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++......  .....++..|++||.+.+       ...++.++|+||+|+++|++
T Consensus       140 ~H~dlkp~Nill~~~-~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~ll~~l  209 (343)
T cd07880         140 IHRDLKPGNLAVNED-CELKILDFGLARQTDSE--MTGYVVTRWYRAPEVILN-------WMHYTQTVDIWSVGCIMAEM  209 (343)
T ss_pred             ecCCCCHHHEEEcCC-CCEEEeecccccccccC--ccccccCCcccCHHHHhC-------CCCCCcHHHHHHHHHHHHHH
Confidence            699999999999966 67999999998754322  233467889999998743       23468899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC-----------------------------CCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR-----------------------------PGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+................                             ......+++.+.+++.+||..||.+|
T Consensus       210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  289 (343)
T cd07880         210 LTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESR  289 (343)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhC
Confidence            9999999865543222111100000                             01123567889999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCC
Q 029154          132 PSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~  150 (198)
                      |++.+++.  +.|+.....
T Consensus       290 ~t~~~~l~--~~~~~~~~~  306 (343)
T cd07880         290 ITAAEALA--HPYFEEFHD  306 (343)
T ss_pred             CCHHHHhc--CccHhhhcC
Confidence            99999998  777765543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.88  E-value=2.2e-22  Score=153.67  Aligned_cols=133  Identities=29%  Similarity=0.447  Sum_probs=98.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||+|+||+++.+ +.++|+|||++....... .....++..|++||.+.+        ..++.++|+||+|+++|++
T Consensus       127 ~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~~pE~~~~--------~~~~~~~Dv~slG~il~~l  196 (287)
T cd06621         127 IHRDIKPSNILLTRK-GQVKLCDFGVSGELVNSL-AGTFTGTSFYMAPERIQG--------KPYSITSDVWSLGLTLLEV  196 (287)
T ss_pred             ccCCCCHHHEEEecC-CeEEEeeccccccccccc-cccccCCccccCHHHhcC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 679999999986443221 123457889999998743        5678899999999999999


Q ss_pred             HcCCCCCCCCC----cHHHHHHHHHccCCCCCC------CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMS----NLQAAYAAAFKHARPGLP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~----~~~~~~~~~~~~~~~~~p------~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|..||....    ..............+.++      ..+++.+.+++.+||..+|.+||++.|+++  +.|+
T Consensus       197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~--~~~~  269 (287)
T cd06621         197 AQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE--HPWI  269 (287)
T ss_pred             HhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh--Cccc
Confidence            99999997652    111222222221222222      234678999999999999999999999999  5554

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=1.8e-22  Score=154.14  Aligned_cols=135  Identities=27%  Similarity=0.393  Sum_probs=99.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.++|+|||+++.......  .....|+..|++||.+.+      .....+.++|+||+|+++|
T Consensus       127 ~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~~Dv~slG~il~  199 (288)
T cd05583         127 IYRDIKLENILLDSE-GHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRG------GSGGHDKAVDWWSLGVLTF  199 (288)
T ss_pred             eccCCCHHHeEECCC-CCEEEEECccccccccccccccccccCCccccCHHHhcC------CCCCCcchhhhHHHHHHHH
Confidence            699999999999976 6799999999875432221  123467889999998753      1123678999999999999


Q ss_pred             HHHcCCCCCCCCCcH--HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNL--QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        79 e~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +|++|..||......  ............+..+..++..+.+++.+||+.||++|||+.++.+.|+
T Consensus       200 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         200 ELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             HHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            999999998643221  1111122223334566778999999999999999999999887766554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.88  E-value=1.8e-22  Score=154.99  Aligned_cols=131  Identities=27%  Similarity=0.317  Sum_probs=95.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||++.......  ......++..|++||.+.+       ...++.++|+||+||++|
T Consensus       138 ~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-------~~~~~~~~Di~slG~~~~  209 (302)
T cd07864         138 LHRDIKCSNILLNNK-GQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLG-------EERYGPAIDVWSCGCILG  209 (302)
T ss_pred             ecCCCCHHHEEECCC-CcEEeCcccccccccCCcccccccceeccCccChHHhcC-------CCCCCchhHHHHHHHHHH
Confidence            699999999999966 689999999987543222  1223356778999998743       234678999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHH--ccCCC--------------------------CCCCCCcHHHHHHHHHhcccCCCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAF--KHARP--------------------------GLPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~--~~~~~--------------------------~~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      ++++|+.||..............  ....+                          .....++..+.+++.+||..||.+
T Consensus       210 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  289 (302)
T cd07864         210 ELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSK  289 (302)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhh
Confidence            99999999976554332211111  00000                          011236789999999999999999


Q ss_pred             CCCHHHHHH
Q 029154          131 RPSFSQIIR  139 (198)
Q Consensus       131 Rps~~~~l~  139 (198)
                      ||++.+++.
T Consensus       290 Rp~~~~il~  298 (302)
T cd07864         290 RCTAEEALN  298 (302)
T ss_pred             CCCHHHHhc
Confidence            999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.88  E-value=2.5e-22  Score=152.86  Aligned_cols=131  Identities=30%  Similarity=0.374  Sum_probs=95.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.+ +.+||+|||++.......  ......++..|++||.+.+       ...++.++|+||||+++|
T Consensus       122 ~h~dl~p~nil~~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-------~~~~~~~~Dv~slG~~l~  193 (287)
T cd07840         122 LHRDIKGSNILINND-GVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG-------ATRYGPEVDMWSVGCILA  193 (287)
T ss_pred             eeccCcHHHeEEcCC-CCEEEccccceeeccCCCcccccccccccccCCceeeEc-------cccCChHHHHHHHHHHHH
Confidence            599999999999976 789999999987543322  1233456788999997643       235688999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC-----------------------------CCCCCCcHHHHHHHHHhcccCCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP-----------------------------GLPEDISPDLAFIVQSCWVEDPN  129 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~p~~~~~~~~~l~~~~l~~dp~  129 (198)
                      ++++|..||..................+                             .....++..+.+++.+||..+|.
T Consensus       194 el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~  273 (287)
T cd07840         194 ELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPK  273 (287)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChh
Confidence            9999999998765432221111000000                             00111378899999999999999


Q ss_pred             CCCCHHHHHH
Q 029154          130 LRPSFSQIIR  139 (198)
Q Consensus       130 ~Rps~~~~l~  139 (198)
                      +||++.++++
T Consensus       274 ~Rp~~~~~l~  283 (287)
T cd07840         274 KRISADQALQ  283 (287)
T ss_pred             hCcCHHHHhh
Confidence            9999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.88  E-value=2.4e-22  Score=153.07  Aligned_cols=139  Identities=29%  Similarity=0.521  Sum_probs=115.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--cccc-CCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--EMMT-AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--~~~~-~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      ||.||...|.+|+.. -++||+|-.++|.....  .+.. .......||++|.+.        +..|+..+|+||||+++
T Consensus       418 iHkDiAaRNCvIdd~-LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~--------n~~yssasDvWsfGVll  488 (563)
T KOG1024|consen  418 IHKDIAARNCVIDDQ-LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQ--------NSHYSSASDVWSFGVLL  488 (563)
T ss_pred             ccchhhhhcceehhh-eeEEeccchhccccCcccccccCCCCCCcccccCHHHHh--------hhhhcchhhhHHHHHHH
Confidence            799999999999955 78999999999854321  1221 233467899999985        47789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ||+++ |+.||...++..- ......+.+...|..+++++..+|..||+.+|++||+++++...|.++..++.
T Consensus       489 WELmtlg~~PyaeIDPfEm-~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt  560 (563)
T KOG1024|consen  489 WELMTLGKLPYAEIDPFEM-EHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT  560 (563)
T ss_pred             HHHHhcCCCCccccCHHHH-HHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence            99997 8899988776443 34455778889999999999999999999999999999999999999877654

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.88  E-value=2.7e-22  Score=150.89  Aligned_cols=128  Identities=34%  Similarity=0.538  Sum_probs=100.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.  +.+||+|||++....... ......|+..|++||.+..        ..++.++|+||+|+++|+
T Consensus       128 ~h~~l~~~nili~~--~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~Dv~slG~~~~~  197 (260)
T cd08222         128 LHRDLKAKNIFLKN--NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKH--------QGYDSKSDIWSLGCILYE  197 (260)
T ss_pred             cccCCChhheEeec--CCEeecccCceeecCCCcccccCCCCCcCccCHHHHcc--------CCCCchhhHHHHHHHHHH
Confidence            69999999999984  459999999987543222 2233567889999998743        556789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||....... ..........+..+..++.++.+++.+||..+|++||++.++++
T Consensus       198 l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         198 MCCLAHAFEGQNFLS-VVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHhCCCCCCCccHHH-HHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            999999997654332 22333344555667778899999999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=4.1e-22  Score=149.01  Aligned_cols=129  Identities=34%  Similarity=0.596  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++........ .....++..|++||...+        ..++.++|+|++|+++|+
T Consensus       121 ~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--------~~~~~~~Dv~~lG~~l~~  191 (254)
T cd06627         121 IHRDIKAANILTTKD-GVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEM--------SGASTASDIWSLGCTVIE  191 (254)
T ss_pred             ccCCCCHHHEEECCC-CCEEEeccccceecCCCcccccccccchhhcCHhhhcC--------CCCCcchhHHHHHHHHHH
Confidence            699999999999976 6899999999875433221 233567889999998753        346789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +++|..||........... ......+..+..++..+.+++.+||..+|++||++.+++.
T Consensus       192 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         192 LLTGNPPYYDLNPMAALFR-IVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHhCCCCCCCccHHHHHHH-HhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            9999999976664333322 2334455667778999999999999999999999999986

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.88  E-value=3e-22  Score=153.07  Aligned_cols=132  Identities=28%  Similarity=0.426  Sum_probs=97.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||++.......  ......|+..|++||.+..      ....++.++|+||||+++|
T Consensus       127 ~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~~Dv~slG~~l~  199 (290)
T cd05613         127 IYRDIKLENILLDSN-GHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG------GDGGHDKAVDWWSMGVLMY  199 (290)
T ss_pred             eccCCCHHHeEECCC-CCEEEeeCccceecccccccccccccCCcccCChhhccC------CCCCCCccccHHHHHHHHH
Confidence            699999999999976 679999999987543221  1223568889999998743      1234678899999999999


Q ss_pred             HHHcCCCCCCCCCcH--HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 029154           79 ELLTNRLPFEGMSNL--QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIR  139 (198)
Q Consensus        79 e~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~  139 (198)
                      ++++|..||......  ............++.+..+++.+.+++.+||..||.+|+     ++.+++.
T Consensus       200 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         200 ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            999999998643211  111112222234456777899999999999999999997     6777766

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.87  E-value=3e-22  Score=152.45  Aligned_cols=131  Identities=27%  Similarity=0.381  Sum_probs=95.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......++..|++||++.+       ...++.++|+||+|+++|+
T Consensus       122 ~h~dl~p~ni~~~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-------~~~~~~~~Dv~slG~~l~~  193 (284)
T cd07836         122 LHRDLKPQNLLINKR-GELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLG-------SRTYSTSIDIWSVGCIMAE  193 (284)
T ss_pred             eeCCCCHHHEEECCC-CcEEEeecchhhhhcCCccccccccccccccChHHhcC-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999966 679999999987443221 1233467889999998753       2456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc----------------CCCC-----------CCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH----------------ARPG-----------LPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~----------------~~~~-----------~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      +++|..||.+..............                ....           .....+..+.+++.+||+.||.+||
T Consensus       194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  273 (284)
T cd07836         194 MITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRI  273 (284)
T ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCC
Confidence            999999998765433221111000                0000           0123567889999999999999999


Q ss_pred             CHHHHHH
Q 029154          133 SFSQIIR  139 (198)
Q Consensus       133 s~~~~l~  139 (198)
                      ++.++++
T Consensus       274 ~~~~~l~  280 (284)
T cd07836         274 SAHDALQ  280 (284)
T ss_pred             CHHHHhc
Confidence            9999987

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.87  E-value=5.7e-22  Score=154.24  Aligned_cols=141  Identities=26%  Similarity=0.397  Sum_probs=102.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++.....  ......++..|++||.+.+       ...++.++|+||+|+++|++
T Consensus       130 iH~dl~p~Nili~~~-~~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Dv~slG~il~el  199 (328)
T cd07856         130 VHRDLKPSNILINEN-CDLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLT-------WQKYDVEVDIWSAGCIFAEM  199 (328)
T ss_pred             ccCCCCHHHEeECCC-CCEEeCccccccccCC--CcCCCcccccccCceeeec-------cCCcCcHHHHHHHHHHHHHH
Confidence            699999999999966 6799999999874322  2234567889999998642       24578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHH--H--------------------Hc--cCCCCC-----CCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAA--A--------------------FK--HARPGL-----PEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~--~--------------------~~--~~~~~~-----p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+..........  .                    ..  ......     ...+++.+.+++.+||+.+|.+|
T Consensus       200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  279 (328)
T cd07856         200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR  279 (328)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence            9999999765532211000  0                    00  000011     12467889999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCCCC
Q 029154          132 PSFSQIIRMLNAFLFTLRPPSP  153 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~~~~  153 (198)
                      |++.+++.  +.|+.....+..
T Consensus       280 ~t~~ell~--~~~~~~~~~~~~  299 (328)
T cd07856         280 ISAAEALA--HPYLAPYHDPTD  299 (328)
T ss_pred             CCHHHHhc--CCccccccCCcc
Confidence            99999998  777765555433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.87  E-value=4.2e-24  Score=168.04  Aligned_cols=131  Identities=24%  Similarity=0.382  Sum_probs=111.3

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||||....  -++||||||++|..+......+.+||+.|+|||++.        ++.|...-|+||.|+++|
T Consensus       686 vHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLr--------nkGyNrSLDMWSVGVIiY  757 (888)
T KOG4236|consen  686 VHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLR--------NKGYNRSLDMWSVGVIIY  757 (888)
T ss_pred             eeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHh--------hccccccccceeeeEEEE
Confidence            6999999999997542  269999999999988888888899999999999985        478899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      -.+.|..||.......+..+....-.++.....+++++.+||..+|+..-.+|-+.+.-+.
T Consensus       758 VsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  758 VSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             EEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            9999999998766655555444445556666779999999999999999999999887665

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.87  E-value=1.6e-22  Score=150.47  Aligned_cols=117  Identities=22%  Similarity=0.263  Sum_probs=90.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.++++|||++......  .....++..|++||.+..        ..++.++|+||+|+++|++
T Consensus       107 ~H~dlkp~Nil~~~~-~~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~il~el  175 (237)
T cd05576         107 VCRDLNPNNILLDDR-GHIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGGI--------SEETEACDWWSLGAILFEL  175 (237)
T ss_pred             eccCCCHHHEEEcCC-CCEEEecccchhccccc--cccCCcCccccCCcccCC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999977 67999999987654332  223455778999998743        5578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF  134 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~  134 (198)
                      ++|..|+......      ........+|..+++.+.+++.+||..||++|+++
T Consensus       176 ~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         176 LTGKTLVECHPSG------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHCcchhhcCchh------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence            9999887532211      01112234567789999999999999999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.87  E-value=6.5e-22  Score=147.77  Aligned_cols=128  Identities=30%  Similarity=0.491  Sum_probs=100.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.++|+|||++...... .......++..|++||.+.+        ...+.++|+||||+++|+
T Consensus       115 ~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--------~~~~~~~D~~slG~~~~~  185 (250)
T cd05123         115 IYRDLKPENILLDAD-GHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLG--------KGYGKAVDWWSLGVLLYE  185 (250)
T ss_pred             eecCCCcceEEEcCC-CcEEEeecCcceecccCCCcccCCcCCccccChHHhCC--------CCCCchhhHHHHHHHHHH
Confidence            599999999999976 67999999998754332 22334567889999998753        446789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH---HHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF---SQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~---~~~l~  139 (198)
                      +++|..||..... ....... ......++...+.++.+++.+||..||.+||++   .++++
T Consensus       186 l~~g~~p~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         186 MLTGKPPFYAEDR-KEIYEKI-LKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             HHHCCCCCCCCCH-HHHHHHH-hcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence            9999999976554 2222222 235566778889999999999999999999999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.87  E-value=2.6e-22  Score=150.88  Aligned_cols=128  Identities=28%  Similarity=0.436  Sum_probs=95.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---------cccCCCCccceecccccccccccccccCCCCchhhHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVY   71 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvw   71 (198)
                      +|+||+|+||+++.+ +.++|+|||++.......         ......++..|++||....        ..++.++|+|
T Consensus       115 ~H~di~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--------~~~~~~~Dv~  185 (265)
T cd05579         115 IHRDLKPDNILIDSN-GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG--------QGHSKTVDWW  185 (265)
T ss_pred             ecCCCCHHHeEEcCC-CCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcC--------CCCCcchhhH
Confidence            699999999999976 679999999987432211         1223467889999998753        4467899999


Q ss_pred             HHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCC--cHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           72 SFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI--SPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        72 s~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |||+++|++++|..||......... .... ......+...  +..+.+++.+||+.+|.+||++..+.+
T Consensus       186 slG~~~~~l~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~  253 (265)
T cd05579         186 SLGCILYEFLVGIPPFHGETPEEIF-QNIL-NGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEE  253 (265)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHH-HHHh-cCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence            9999999999999999766543322 2222 2223334444  899999999999999999999944433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.87  E-value=8.9e-22  Score=149.51  Aligned_cols=131  Identities=28%  Similarity=0.432  Sum_probs=95.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|+||+++.+ +.+||+|||++....... ......++..|+|||.+..       ...++.++|+||+|+++||
T Consensus       120 ~H~~l~~~ni~~~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~~Dv~slG~~l~~  191 (282)
T cd07829         120 LHRDLKPQNILINRD-GVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLG-------SKHYSTAVDIWSVGCIFAE  191 (282)
T ss_pred             ccCCCChheEEEcCC-CCEEEecCCcccccCCCccccCccccCcCcCChHHhcC-------CcCCCccccHHHHHHHHHH
Confidence            699999999999976 679999999987543322 2233456778999998753       2367889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHc-------------cC---C---C--------CCCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFK-------------HA---R---P--------GLPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~-------------~~---~---~--------~~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      +++|..||.+.............             ..   .   +        ......+..+.+++.+||..||.+||
T Consensus       192 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp  271 (282)
T cd07829         192 MITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI  271 (282)
T ss_pred             HHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC
Confidence            99999999775543322111000             00   0   0        00112467899999999999999999


Q ss_pred             CHHHHHH
Q 029154          133 SFSQIIR  139 (198)
Q Consensus       133 s~~~~l~  139 (198)
                      ++.+++.
T Consensus       272 ~~~~~l~  278 (282)
T cd07829         272 SAKEALK  278 (282)
T ss_pred             CHHHHhh
Confidence            9999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.87  E-value=5.3e-22  Score=147.26  Aligned_cols=137  Identities=26%  Similarity=0.355  Sum_probs=96.8

Q ss_pred             CCCCCCCCCeEEcCC---CCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPD---QKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~---~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      +||||||.|||+..+   .+.|||+|||++|......    .....+-|..|.|||.+.+       ...|+.+.|+|+.
T Consensus       154 lHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG-------a~hYT~AiDvWAi  226 (438)
T KOG0666|consen  154 LHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG-------ARHYTKAIDVWAI  226 (438)
T ss_pred             eeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcc-------cccccchhhhHHH
Confidence            699999999999755   2579999999999654322    1223467999999999986       4789999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCcH---------HHHHHH--HHccCCCC-------CCCC------------------------
Q 029154           74 GIVLWELLTNRLPFEGMSNL---------QAAYAA--AFKHARPG-------LPED------------------------  111 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~~---------~~~~~~--~~~~~~~~-------~p~~------------------------  111 (198)
                      ||++.|+++..+.|.+....         .+..++  ........       .|+.                        
T Consensus       227 GCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~  306 (438)
T KOG0666|consen  227 GCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKH  306 (438)
T ss_pred             HHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHh
Confidence            99999999988887653211         111111  11100000       0110                        


Q ss_pred             --CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          112 --ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       112 --~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                        -++...+|+.++|.+||.+|.|+++.++  +.++.
T Consensus       307 k~k~~~a~~LL~klL~yDP~kRIta~qAle--h~yF~  341 (438)
T KOG0666|consen  307 KVKDPSALDLLQKLLTYDPIKRITAEQALE--HPYFT  341 (438)
T ss_pred             cCCCchHHHHHHHHhccCchhhccHHHHhc--ccccc
Confidence              1344789999999999999999999998  44443

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.87  E-value=1.5e-21  Score=144.47  Aligned_cols=130  Identities=36%  Similarity=0.581  Sum_probs=100.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||+|+||+++.+ +.++|+|||++.............++..|++||....        ..++.++|+|++|++++++
T Consensus       109 ~h~~i~~~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~--------~~~~~~~Di~slG~~l~~l  179 (244)
T smart00220      109 IHRDLKPENILLDED-GHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLG--------KGYGKAVDVWSLGVILYEL  179 (244)
T ss_pred             ecCCcCHHHeEECCC-CcEEEccccceeeeccccccccccCCcCCCCHHHHcc--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 6799999999876544333445678889999998742        4568899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCC--CcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPED--ISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++|..||........................  ++.++.+++.+||..+|++||++.++++
T Consensus       180 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      180 LTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            9999999764433333333322222222222  7889999999999999999999999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.86  E-value=3.4e-23  Score=162.44  Aligned_cols=130  Identities=28%  Similarity=0.394  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|.||||+|||++.+...+||||||.|.....+. .+.+.-+..|.|||++.+        ..|++..|+||.||++||+
T Consensus       558 lHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG--------~~yd~~iD~WSvgctLYEl  628 (752)
T KOG0670|consen  558 LHADIKPDNILVNESKNILKLCDFGSASFASENE-ITPYLVSRFYRAPEIILG--------LPYDYPIDTWSVGCTLYEL  628 (752)
T ss_pred             eecccCccceEeccCcceeeeccCcccccccccc-ccHHHHHHhccCcceeec--------CcccCCccceeeceeeEEe
Confidence            6999999999999887789999999987655544 234455789999999976        6789999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCC-----------------------------------------------------
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPG-----------------------------------------------------  107 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------  107 (198)
                      .||+..|.|..+.+-+...+......+                                                     
T Consensus       629 YtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~  708 (752)
T KOG0670|consen  629 YTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAV  708 (752)
T ss_pred             eccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhcc
Confidence            999999998776543322111000000                                                     


Q ss_pred             --CCCC---CcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154          108 --LPED---ISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus       108 --~p~~---~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                        +|.+   .-..+.+|+.+||.+||++|.+..++|+
T Consensus       709 q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  709 QRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             CCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence              0000   0134789999999999999999999888

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.86  E-value=1e-21  Score=148.93  Aligned_cols=128  Identities=23%  Similarity=0.470  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---------------------cccCCCCccceeccccccccccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---------------------MMTAETGTYRWMAPELYSTVTLRQG   59 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~~~~~~   59 (198)
                      +|+||||+||+++.+ +.++|+|||++.......                     ......++..|++||++..      
T Consensus       124 ~H~dl~~~ni~i~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~------  196 (280)
T cd05581         124 IHRDLKPENILLDKD-MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE------  196 (280)
T ss_pred             eecCCCHHHeEECCC-CCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC------
Confidence            599999999999976 679999999987433211                     1123457889999998753      


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH----H
Q 029154           60 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF----S  135 (198)
Q Consensus        60 ~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~----~  135 (198)
                        ..++.++|+||+|++++++++|..||........ ... ........+..+++.+.+++.+||..+|.+||++    .
T Consensus       197 --~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  272 (280)
T cd05581         197 --KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-FQK-ILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYD  272 (280)
T ss_pred             --CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-HHH-HHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHH
Confidence              4578899999999999999999999986653222 222 2234455677789999999999999999999999    8


Q ss_pred             HHHH
Q 029154          136 QIIR  139 (198)
Q Consensus       136 ~~l~  139 (198)
                      ++++
T Consensus       273 ~ll~  276 (280)
T cd05581         273 ELKA  276 (280)
T ss_pred             HHhc
Confidence            8776

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=2.1e-22  Score=161.34  Aligned_cols=129  Identities=23%  Similarity=0.370  Sum_probs=92.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC---------ccc------------------c----------------ccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE---------TVT------------------E----------------MMT   37 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~---------~~~------------------~----------------~~~   37 (198)
                      |||||||+|||||.+ +++||.||||+...         ...                  .                ...
T Consensus       751 IHRDiKPDNILIDrd-GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ah  829 (1034)
T KOG0608|consen  751 IHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAH  829 (1034)
T ss_pred             eecccCccceEEccC-CceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhh
Confidence            799999999999988 79999999998521         000                  0                012


Q ss_pred             CCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHH
Q 029154           38 AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPD  115 (198)
Q Consensus        38 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~  115 (198)
                      ..+||+.|+|||++..        ..|+..+|+||.|+++|||+.|++||.........+..........+  ...++.+
T Consensus       830 slvgt~nyiapevl~r--------~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e  901 (1034)
T KOG0608|consen  830 SLVGTPNYIAPEVLAR--------TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKE  901 (1034)
T ss_pred             hhcCCCcccChHHhcc--------cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHH
Confidence            2479999999999853        67888999999999999999999999776654433222111122223  3458999


Q ss_pred             HHHHHHHhcccCCCCCCC---HHHHHH
Q 029154          116 LAFIVQSCWVEDPNLRPS---FSQIIR  139 (198)
Q Consensus       116 ~~~l~~~~l~~dp~~Rps---~~~~l~  139 (198)
                      +.++|.+++. +++.|..   +++|-.
T Consensus       902 ~~~li~kLc~-sad~RLGkng~d~vKa  927 (1034)
T KOG0608|consen  902 ALDLIQKLCC-SADSRLGKNGADQVKA  927 (1034)
T ss_pred             HHHHHHHHhc-Chhhhhcccchhhhhc
Confidence            9999988653 5777842   444544

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=1.3e-22  Score=166.89  Aligned_cols=133  Identities=27%  Similarity=0.472  Sum_probs=107.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||+|-.|||++.+ +.|||+|||++.....+. ...+.+||++|||||++.+..   .....|+..+|+||+|++..|
T Consensus       145 iHRDikG~NiLLT~e-~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e---~~d~tyd~R~D~WsLGITaIE  220 (953)
T KOG0587|consen  145 IHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDE---SPDATYDYRSDLWSLGITAIE  220 (953)
T ss_pred             eeecccCceEEEecc-CcEEEeeeeeeeeeecccccccCcCCCcccccceeeeccc---CCCCCcccccchhhccceeeh
Confidence            799999999999987 569999999998655433 245679999999999986522   123456789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC---CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP---GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |..|.+|+..+.+....+.+.  .++|   ..|..++.++.++|..||..|-.+||+..++++
T Consensus       221 ladG~PPl~DmHPmraLF~Ip--RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  221 MAEGAPPLCDMHPMRALFLIP--RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             hcCCCCCccCcchhhhhccCC--CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            999999999988877654432  2222   225668899999999999999999999999887

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=4.2e-22  Score=154.19  Aligned_cols=135  Identities=24%  Similarity=0.404  Sum_probs=98.6

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      ||.||||.||||...  .+.+||.|||+++.+.+...        .+...||.+|++||++.-+.    +....+.++||
T Consensus       592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgk----ePPKIsnKVDV  667 (775)
T KOG1151|consen  592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGK----EPPKISNKVDV  667 (775)
T ss_pred             eeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCC----CCCccccceee
Confidence            799999999999743  24689999999996654321        22346899999999985321    23456889999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHHHHHHH--HHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQAAYAA--AFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ||.|+++|.++.|+.||...-..++.+..  .+..-...+|  +.++.++.+||++||++.-.+|....++..
T Consensus       668 WSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  668 WSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             EeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            99999999999999999765444433221  1111112233  458899999999999999999987776655

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.85  E-value=2.4e-21  Score=153.91  Aligned_cols=134  Identities=25%  Similarity=0.491  Sum_probs=103.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc---CCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT---AETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||.+.|+|++.+ +++||+|||++|..-....+.   ..+-...|||+|.+.-        +.++.++|+|+||+++
T Consensus       659 VHrd~a~rNcLv~~e-~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsill--------gkFttaSDvWafgvTl  729 (807)
T KOG1094|consen  659 VHRDLATRNCLVDGE-FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILL--------GKFTTASDVWAFGVTL  729 (807)
T ss_pred             hhccccccceeecCc-ccEEecCcccccccccCCceeeecceeeeeeehhHHHHHh--------ccccchhhhhhhHHHH
Confidence            799999999999977 789999999998443222221   1234679999998853        7899999999999999


Q ss_pred             HHHH--cCCCCCCCCCcHHHHHHHH--HccC----CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           78 WELL--TNRLPFEGMSNLQAAYAAA--FKHA----RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        78 ~e~~--~g~~p~~~~~~~~~~~~~~--~~~~----~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ||++  +...||......+......  ....    -+..|..++..+..+|.+||.+|..+||+|+++...|++
T Consensus       730 wE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  730 WEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             HHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            9986  4778998766544332221  1111    124577899999999999999999999999999887765

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.84  E-value=6e-21  Score=136.38  Aligned_cols=139  Identities=19%  Similarity=0.328  Sum_probs=107.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||+||.|++|+.....++|+|+|+|........+...+.+..|..||.+..       .+.|+..-|+|||||++.+|
T Consensus       154 mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVd-------y~~YDYSLD~WS~GcmlA~m  226 (338)
T KOG0668|consen  154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD-------YQMYDYSLDMWSLGCMLASM  226 (338)
T ss_pred             ccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheee-------chhccccHHHHHHHHHHHHH
Confidence            69999999999998878899999999987766666677788999999999863       57889999999999999999


Q ss_pred             HcCCCCC-CCCCcHHHHHHHHHc---------------cCCCCC--------------------CCCCcHHHHHHHHHhc
Q 029154           81 LTNRLPF-EGMSNLQAAYAAAFK---------------HARPGL--------------------PEDISPDLAFIVQSCW  124 (198)
Q Consensus        81 ~~g~~p~-~~~~~~~~~~~~~~~---------------~~~~~~--------------------p~~~~~~~~~l~~~~l  124 (198)
                      +..+.|| .|..+.++...+...               ...+.+                    ..-.++++.+|+.++|
T Consensus       227 iFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklL  306 (338)
T KOG0668|consen  227 IFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLL  306 (338)
T ss_pred             HhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHH
Confidence            9888776 455554444332110               000000                    0114689999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhhc
Q 029154          125 VEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       125 ~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ..|-++|+|+.|.+.  |.++...
T Consensus       307 rYDHqeRlTakEam~--HpyF~~~  328 (338)
T KOG0668|consen  307 RYDHQERLTAKEAMA--HPYFAPV  328 (338)
T ss_pred             hhccccccchHHHhc--CchHHHH
Confidence            999999999999998  6555543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.84  E-value=2.9e-21  Score=143.87  Aligned_cols=140  Identities=22%  Similarity=0.444  Sum_probs=103.1

Q ss_pred             CCCCCCCCeEEcCCCC--ceEEecccCcccCccc--------ccccCCCCccceecccccccccccccccCCCCchhhHH
Q 029154            2 GKFMKEDNLLLTPDQK--SLKLADFGLAREETVT--------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVY   71 (198)
Q Consensus         2 H~dlKp~NIll~~~~~--~~kl~DfGla~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvw   71 (198)
                      ||||||+|||...-+.  -+||+||-+......+        ....+.+|+..|||||+..-.   .++...|+.+.|.|
T Consensus       199 HRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~f---v~qA~~YDKrCDlw  275 (463)
T KOG0607|consen  199 HRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVF---VDQATFYDKRCDLW  275 (463)
T ss_pred             cccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhh---ccccccccccccHH
Confidence            9999999999975422  3799999887532211        113356899999999986432   22446788999999


Q ss_pred             HHHHHHHHHHcCCCCCCCCCcH-------------HHHHHHHHccCCCCCCCC----CcHHHHHHHHHhcccCCCCCCCH
Q 029154           72 SFGIVLWELLTNRLPFEGMSNL-------------QAAYAAAFKHARPGLPED----ISPDLAFIVQSCWVEDPNLRPSF  134 (198)
Q Consensus        72 s~G~~l~e~~~g~~p~~~~~~~-------------~~~~~~~~~~~~~~~p~~----~~~~~~~l~~~~l~~dp~~Rps~  134 (198)
                      |+|+++|-|+.|.+||.|....             +..+...+......+|+.    ++.+..+++..+|..|+.+|.++
T Consensus       276 SLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa  355 (463)
T KOG0607|consen  276 SLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSA  355 (463)
T ss_pred             HHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhh
Confidence            9999999999999999764321             111223344555666643    78999999999999999999999


Q ss_pred             HHHHHHHHHHHh
Q 029154          135 SQIIRMLNAFLF  146 (198)
Q Consensus       135 ~~~l~~l~~~~~  146 (198)
                      .++++  +.|..
T Consensus       356 ~~vln--hPw~~  365 (463)
T KOG0607|consen  356 AQVLN--HPWVQ  365 (463)
T ss_pred             hhccC--Ccccc
Confidence            99988  55544

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=6.7e-21  Score=143.11  Aligned_cols=123  Identities=25%  Similarity=0.498  Sum_probs=101.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |-||||-+|+||+.+ +++||.|+|+++... .....++.|||+.|.|||++.+        ..|+..+|+|++|++++|
T Consensus       373 iyrdlkldnvlldae-ghikltdygmcke~l~~gd~tstfcgtpnyiapeilrg--------eeygfsvdwwalgvlmfe  443 (593)
T KOG0695|consen  373 IYRDLKLDNVLLDAE-GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG--------EEYGFSVDWWALGVLMFE  443 (593)
T ss_pred             eeeeccccceEEccC-CceeecccchhhcCCCCCcccccccCCCcccchhhhcc--------cccCceehHHHHHHHHHH
Confidence            569999999999987 789999999998543 3344567899999999999965        678899999999999999


Q ss_pred             HHcCCCCCC--CC----CcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFE--GM----SNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~--~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      |+.|+.||.  ++    .+..+...+.+......+|..++..+..+++..|..||.+|.
T Consensus       444 mmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  444 MMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             HHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhc
Confidence            999999995  21    123344444555566678999999999999999999999995

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.6e-21  Score=142.78  Aligned_cols=133  Identities=29%  Similarity=0.396  Sum_probs=98.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||.|+|++.+ ..+||||||+++.....  ...+..+-|.+|.|||++++       ...|+...||||.||++.
T Consensus       178 LHRDIKPGNLLVNSN-CvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMG-------aRhYs~AvDiWSVGCIFa  249 (449)
T KOG0664|consen  178 LHRDIKPGNLLVNSN-CILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMG-------ARRYTGAVDIWSVGCIFA  249 (449)
T ss_pred             hhccCCCccEEeccC-ceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhc-------chhhcCccceehhhHHHH
Confidence            599999999999966 78999999999965432  22344567899999999986       578999999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHH--------------cc-------CC---CCC--------CCCCcHHHHHHHHHhccc
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAF--------------KH-------AR---PGL--------PEDISPDLAFIVQSCWVE  126 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~--------------~~-------~~---~~~--------p~~~~~~~~~l~~~~l~~  126 (198)
                      |++..+..|+...+.++...+..              ++       ..   +.+        +..-..+...++..++..
T Consensus       250 ELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~  329 (449)
T KOG0664|consen  250 ELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHF  329 (449)
T ss_pred             HHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCC
Confidence            99998888987776554422211              10       00   111        112234567788889999


Q ss_pred             CCCCCCCHHHHHHHH
Q 029154          127 DPNLRPSFSQIIRML  141 (198)
Q Consensus       127 dp~~Rps~~~~l~~l  141 (198)
                      ||.+|.+-.+.+.++
T Consensus       330 d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  330 DPDKRISVEEALQHR  344 (449)
T ss_pred             CCcccccHhhhcccc
Confidence            999999888887754

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.83  E-value=9.9e-22  Score=161.09  Aligned_cols=129  Identities=25%  Similarity=0.390  Sum_probs=92.3

Q ss_pred             CCCCCCCCCeEEcCC----CCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPD----QKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~----~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||.||||...    ...++|+|||+++......    ...+..||-+|.|||++..        ..-+.++||+|
T Consensus       628 VHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~--------~~~~~avDiFs  699 (903)
T KOG1027|consen  628 VHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLRE--------DRKTQAVDIFS  699 (903)
T ss_pred             ccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhc--------cccCcccchhh
Confidence            799999999999862    2468999999998543221    1344578999999999864        33356899999


Q ss_pred             HHHHHHHHHcC-CCCCCCCCcHHHHHHHHHccCCC-CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           73 FGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        73 ~G~~l~e~~~g-~~p~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +||++|.+++| ..||......+.  .+....... .+-...+.++.+||.+|+..||..||++.+|+.
T Consensus       700 lGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  700 LGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             cCceEEEEecCCccCCCchHHhhh--hhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            99999999875 789864332221  222111111 111122238999999999999999999999987

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.83  E-value=9.5e-21  Score=165.88  Aligned_cols=133  Identities=20%  Similarity=0.305  Sum_probs=91.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+||+++.+ ...++. ||.......   .....|+..|+|||++.+        ..++.++|||||||++||+
T Consensus       805 iH~dlkp~Nil~~~~-~~~~~~-~~~~~~~~~---~~~~~~t~~y~aPE~~~~--------~~~~~~sDv~S~Gvvl~el  871 (968)
T PLN00113        805 VVGNLSPEKIIIDGK-DEPHLR-LSLPGLLCT---DTKCFISSAYVAPETRET--------KDITEKSDIYGFGLILIEL  871 (968)
T ss_pred             ecCCCCHHhEEECCC-CceEEE-ecccccccc---CCCccccccccCcccccC--------CCCCcccchhhHHHHHHHH
Confidence            699999999999966 556665 665543221   123467899999999753        5688999999999999999


Q ss_pred             HcCCCCCCCCCc----HHHHHHHHHc------cCCCCCCC------CCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSN----LQAAYAAAFK------HARPGLPE------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        81 ~~g~~p~~~~~~----~~~~~~~~~~------~~~~~~p~------~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ++|+.||.....    ..........      ...+.+..      ....++.+++.+||..||.+||++.++++.|+..
T Consensus       872 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~  951 (968)
T PLN00113        872 LTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA  951 (968)
T ss_pred             HhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence            999999853221    1111110000      01111111      1123567899999999999999999999999876


Q ss_pred             Hh
Q 029154          145 LF  146 (198)
Q Consensus       145 ~~  146 (198)
                      ..
T Consensus       952 ~~  953 (968)
T PLN00113        952 SR  953 (968)
T ss_pred             hc
Confidence            44

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=2.8e-20  Score=152.78  Aligned_cols=136  Identities=27%  Similarity=0.550  Sum_probs=110.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCC--ccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETG--TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~g--t~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||-..|+|+..- .++||.|||+++...... .+....|  .+.|||-|.+.        ...|+.++||||||+++
T Consensus       820 VHrdLaaRNVLVksP-~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~--------~~~~thqSDVWsfGVti  890 (1177)
T KOG1025|consen  820 VHRDLAARNVLVKSP-NHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIR--------IRKYTHQSDVWSFGVTI  890 (1177)
T ss_pred             hhhhhhhhheeecCC-CeEEEEecchhhccCcccccccccccccCcHHHHHHHhh--------ccCCCchhhhhhhhhhH
Confidence            799999999999854 789999999998654322 2333333  56899999885        47899999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||++| |..||.+... .........+.+...|+.++.++..++.+||..|+..||+|+++...+.....
T Consensus       891 WElmTFGa~Py~gi~~-~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  891 WELMTFGAKPYDGIPA-EEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             HHHHhcCCCccCCCCH-HHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            99997 8899998664 33344455677788999999999999999999999999999999887766543

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.83  E-value=2.1e-20  Score=129.24  Aligned_cols=131  Identities=27%  Similarity=0.346  Sum_probs=100.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||.|+||+.+ +.+|++|||+++-.+... +++..+-|..|.+|.++.+       .+-|+...|+||-||++.|
T Consensus       123 lhrdlkpqnllin~n-gelkladfglarafgipvrcysaevvtlwyrppdvlfg-------akly~tsidmwsagcifae  194 (292)
T KOG0662|consen  123 LHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-------AKLYSTSIDMWSAGCIFAE  194 (292)
T ss_pred             hhccCCcceEEeccC-CcEEecccchhhhcCCceEeeeceeeeeeccCcceeee-------eehhccchHhhhcchHHHH
Confidence            599999999999987 789999999999766544 5667788999999999875       4678999999999999999


Q ss_pred             HHc-CCCCCCCCCcHHHHHHHHHccCCC---------CCCC------------------CCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLT-NRLPFEGMSNLQAAYAAAFKHARP---------GLPE------------------DISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~-g~~p~~~~~~~~~~~~~~~~~~~~---------~~p~------------------~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      +.. |++.|.+.+-.++...+...-..+         .+|+                  .++..-++++++++..+|.+|
T Consensus       195 lanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qr  274 (292)
T KOG0662|consen  195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQR  274 (292)
T ss_pred             HhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccc
Confidence            985 778888866544443332221111         1111                  112345799999999999999


Q ss_pred             CCHHHHHH
Q 029154          132 PSFSQIIR  139 (198)
Q Consensus       132 ps~~~~l~  139 (198)
                      .++++.++
T Consensus       275 isaeaalq  282 (292)
T KOG0662|consen  275 ISAEAALQ  282 (292)
T ss_pred             cCHHHHhc
Confidence            99999888

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.81  E-value=4.5e-20  Score=149.32  Aligned_cols=138  Identities=29%  Similarity=0.462  Sum_probs=95.8

Q ss_pred             CCCCCCCCCeEEcCCC-C--ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ-K--SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-~--~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||.||++-... +  .-||+|||.|+...++..+.+.+||..|++||.+..       .+.|+..+|.|||||++
T Consensus       142 vHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~-------q~~y~~tVDLWS~Gvtl  214 (732)
T KOG4250|consen  142 VHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYER-------QKKYTATVDLWSFGVTL  214 (732)
T ss_pred             eeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhh-------ccCcCceeehhhhhhHH
Confidence            6999999999985321 2  359999999998888888888999999999999841       37889999999999999


Q ss_pred             HHHHcCCCCCCCCCcHH----HHHHHHHcc------------C-C------CCCCCCCcH----HHHHHHHHhcccCCCC
Q 029154           78 WELLTNRLPFEGMSNLQ----AAYAAAFKH------------A-R------PGLPEDISP----DLAFIVQSCWVEDPNL  130 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~----~~~~~~~~~------------~-~------~~~p~~~~~----~~~~l~~~~l~~dp~~  130 (198)
                      |+++||..||.......    ..+......            . +      .++|...+.    .+..++..+|..+|.+
T Consensus       215 Y~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~  294 (732)
T KOG4250|consen  215 YECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRK  294 (732)
T ss_pred             HHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHH
Confidence            99999999985332221    111111110            0 0      112222332    3446777788888888


Q ss_pred             CC--CHHHHHHHHHHHH
Q 029154          131 RP--SFSQIIRMLNAFL  145 (198)
Q Consensus       131 Rp--s~~~~l~~l~~~~  145 (198)
                      |-  .+.+....+.+++
T Consensus       295 ~~~~~~~~~Fa~~~dIL  311 (732)
T KOG4250|consen  295 RGHEGFDRFFAEVDDIL  311 (732)
T ss_pred             hCCCCcchHHHHHHHHH
Confidence            87  5555555554444

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.81  E-value=1.3e-19  Score=146.91  Aligned_cols=142  Identities=18%  Similarity=0.196  Sum_probs=92.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccC--CCCccceecccccccccccccc--------------cCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTA--ETGTYRWMAPELYSTVTLRQGE--------------KKHY   64 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~--------------~~~~   64 (198)
                      |||||||+|||++.+ +.+||+|||+++..........  ..+++.|++||.+.........              ....
T Consensus       331 vHrDLKp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~  409 (507)
T PLN03224        331 VHRDIKPENLLVTVD-GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGR  409 (507)
T ss_pred             ecCCCchHhEEECCC-CcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCC
Confidence            699999999999976 6799999999975432222222  2347899999987431100000              0011


Q ss_pred             CchhhHHHHHHHHHHHHcCCC-CCCCCCcHHHHHH---------HHHccCC--CCCCCCCcHHHHHHHHHhcccCC---C
Q 029154           65 NNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYA---------AAFKHAR--PGLPEDISPDLAFIVQSCWVEDP---N  129 (198)
Q Consensus        65 ~~~~Dvws~G~~l~e~~~g~~-p~~~~~~~~~~~~---------~~~~~~~--~~~p~~~~~~~~~l~~~~l~~dp---~  129 (198)
                      ..+.|+||+||++++|++|.. ||.+.........         .......  ....+..++..++|+.++|..+|   .
T Consensus       410 ~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~  489 (507)
T PLN03224        410 PDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANR  489 (507)
T ss_pred             CCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcc
Confidence            235799999999999999875 6653221111100         0011111  22234578899999999999876   6


Q ss_pred             CCCCHHHHHHHHHHHH
Q 029154          130 LRPSFSQIIRMLNAFL  145 (198)
Q Consensus       130 ~Rps~~~~l~~l~~~~  145 (198)
                      +|+|++|+++  |.|+
T Consensus       490 ~RlSa~eaL~--Hp~f  503 (507)
T PLN03224        490 GRLSVGQALS--HRFF  503 (507)
T ss_pred             cCCCHHHHhC--CCCc
Confidence            8999999999  6554

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=5.9e-19  Score=136.31  Aligned_cols=140  Identities=27%  Similarity=0.569  Sum_probs=98.0

Q ss_pred             CCCCCCCCeEEcCCCCceEEecccCcccCccc-----ccccCCCCccceecccccccccccccccCCC-C-chhhHHHHH
Q 029154            2 GKFMKEDNLLLTPDQKSLKLADFGLAREETVT-----EMMTAETGTYRWMAPELYSTVTLRQGEKKHY-N-NKVDVYSFG   74 (198)
Q Consensus         2 H~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~-~~~Dvws~G   74 (198)
                      |||||..|||+.++ +.+-|+|+|||......     ......+||..|||||++....    ....| + ..+||||||
T Consensus       339 HRDlKSKNILVKkn-~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdeti----n~~~Fesyk~ADIYafg  413 (513)
T KOG2052|consen  339 HRDLKSKNILVKKN-GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETI----NMKHFESYKRADIYAFG  413 (513)
T ss_pred             ccccccccEEEccC-CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhc----ChhhhhhhhHHHHHHHH
Confidence            99999999999977 78999999999643221     2234568999999999986421    11112 1 359999999


Q ss_pred             HHHHHHHc-----C-----CCCCCCCCcHHHHHHH-----HHccCCCCCCCCCc--H---HHHHHHHHhcccCCCCCCCH
Q 029154           75 IVLWELLT-----N-----RLPFEGMSNLQAAYAA-----AFKHARPGLPEDIS--P---DLAFIVQSCWVEDPNLRPSF  134 (198)
Q Consensus        75 ~~l~e~~~-----g-----~~p~~~~~~~~~~~~~-----~~~~~~~~~p~~~~--~---~~~~l~~~~l~~dp~~Rps~  134 (198)
                      .++||++.     |     +.||.+..+.+..+..     .....+|.+|..+.  +   .+..+|+.||.-+|+-|-|+
T Consensus       414 LVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA  493 (513)
T KOG2052|consen  414 LVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA  493 (513)
T ss_pred             HHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence            99999875     2     4688665433322222     22345555554432  3   35578999999999999999


Q ss_pred             HHHHHHHHHHHh
Q 029154          135 SQIIRMLNAFLF  146 (198)
Q Consensus       135 ~~~l~~l~~~~~  146 (198)
                      -.+-+.|..+..
T Consensus       494 LriKKtl~~l~~  505 (513)
T KOG2052|consen  494 LRIKKTLAKLSN  505 (513)
T ss_pred             HHHHHHHHHHhc
Confidence            888888877653

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.75  E-value=1e-18  Score=140.84  Aligned_cols=133  Identities=27%  Similarity=0.405  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||-.|||+... +.+|++|||.+...+.... .+.++||++|||||+..-+     ..+.|...+|+|++|++..|
T Consensus       134 ~hRdiKGanilltd~-gDvklaDfgvsaqitati~KrksfiGtpywmapEvaave-----rkggynqlcdiwa~gitAie  207 (829)
T KOG0576|consen  134 IHRDIKGANILLTDE-GDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE-----RKGGYNQLCDIWALGITAIE  207 (829)
T ss_pred             ccccccccceeeccc-CceeecccCchhhhhhhhhhhhcccCCccccchhHHHHH-----hcccccccccccccccchhh
Confidence            799999999999966 6799999999976554332 3467999999999986431     24678899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC---CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +...++|.....+++..+.--.....++   -+..+++.+.+|++.++..+|.+||+++.+++
T Consensus       208 l~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  208 LGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             hhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            9999999877777766544332333322   24458899999999999999999999998876

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.75  E-value=4.3e-18  Score=132.43  Aligned_cols=143  Identities=28%  Similarity=0.483  Sum_probs=96.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|||||..|||+..| ..+.|+|||+|.......   .....+||..|||||++-+..-++  ...--.+.||||+|.++
T Consensus       338 aHRDlkSkNVLvK~D-lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~--d~~Afkr~DvYamgLVL  414 (534)
T KOG3653|consen  338 AHRDLKSKNVLVKND-LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQ--DRDAFKRIDVYAMGLVL  414 (534)
T ss_pred             ccccccccceEEccC-CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccc--cHHHHHHHHHHHHHHHH
Confidence            599999999999977 789999999997443221   122368999999999987643111  01111368999999999


Q ss_pred             HHHHcCC------------CCCC---CCCcHHHHH--HHHHccCCCCCCCCC-----cHHHHHHHHHhcccCCCCCCCHH
Q 029154           78 WELLTNR------------LPFE---GMSNLQAAY--AAAFKHARPGLPEDI-----SPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        78 ~e~~~g~------------~p~~---~~~~~~~~~--~~~~~~~~~~~p~~~-----~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ||+++.-            .||+   |..+.....  ....+..+|.+|..+     ..-+.+.+..||..|+.-|.|+.
T Consensus       415 WEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  415 WEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             HHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            9998731            2343   112111111  123345566666543     34477889999999999999988


Q ss_pred             HHHHHHHHHHh
Q 029154          136 QIIRMLNAFLF  146 (198)
Q Consensus       136 ~~l~~l~~~~~  146 (198)
                      =+.+.+..+..
T Consensus       495 Cv~eR~~~l~~  505 (534)
T KOG3653|consen  495 CVEERMAELMM  505 (534)
T ss_pred             HHHHHHHHHhc
Confidence            77776655433

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.74  E-value=1.2e-17  Score=140.82  Aligned_cols=135  Identities=20%  Similarity=0.240  Sum_probs=96.7

Q ss_pred             CCCCCCC-CeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            2 GKFMKED-NLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         2 H~dlKp~-NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |++.+|. |+++..+ ...++.|||.++.....   ......+||+.|+|||++.+        ..++.++|||||||++
T Consensus       500 ~~~~~p~~~~~~~p~-~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~--------~~~~~~~DiwSlG~il  570 (669)
T cd05610         500 TQKPRPHGNLYQTPK-QVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLG--------KPHGPAVDWWALGVCL  570 (669)
T ss_pred             CCCCCCCCceeECCc-cccccccCCCchhhhcccccccCCceeeCccccCHHHcCC--------CCCCcHHHHHHHHHHH
Confidence            3455666 4555544 45778899988653221   11234589999999999864        5578999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccC-CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||++|+.||.+............... .+.....++..+.+++.+||..||.+||++.++++  +.|+..
T Consensus       571 ~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~--h~~~~~  639 (669)
T cd05610         571 FEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQ--HPLFHG  639 (669)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHh--CHhhcC
Confidence            999999999987665443322222111 12223457888999999999999999999999999  666543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.72  E-value=6.7e-18  Score=123.52  Aligned_cols=132  Identities=27%  Similarity=0.380  Sum_probs=91.9

Q ss_pred             CCCCCCCCCeEEc-CCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLT-PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~-~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||||||.+||||- .+...+||||||+.+..+...  .....+..|.+||.....   ..+.-...+.+|+|.||+++|.
T Consensus       143 VHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV--~~~~~~~~y~~pe~~~~~---~ne~~~~~ps~D~WqfGIi~f~  217 (378)
T KOG1345|consen  143 VHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV--KYLEYVNNYHAPELCDTV---VNEKLVVNPSTDIWQFGIIFFY  217 (378)
T ss_pred             hhcccccceEEEecCCccEEEeeecccccccCcee--hhhhhhcccCCcHHHhhc---cccceEecccccchheeeeeee
Confidence            7999999999994 344579999999987544322  122235578888875431   1122334678999999999999


Q ss_pred             HHcCCCCCCCCCcHH---HHHHHHHccCCCCCCCC---CcHHHHHHHHHhcccCCCCCCCHHHH
Q 029154           80 LLTNRLPFEGMSNLQ---AAYAAAFKHARPGLPED---ISPDLAFIVQSCWVEDPNLRPSFSQI  137 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~p~~---~~~~~~~l~~~~l~~dp~~Rps~~~~  137 (198)
                      +++|..||+.....+   ..+........+.+|..   +++.+..+.++-|..++.+|-..-++
T Consensus       218 cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~  281 (378)
T KOG1345|consen  218 CLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTA  281 (378)
T ss_pred             eecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence            999999998433222   23444444555555543   78899999999999999999444433

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=8.7e-17  Score=123.46  Aligned_cols=143  Identities=25%  Similarity=0.345  Sum_probs=103.2

Q ss_pred             CCCCCCCCeEEcCCCC---ceEEecccCcccCcc-------cccccCCCCccceecccccccccccccccCCC-CchhhH
Q 029154            2 GKFMKEDNLLLTPDQK---SLKLADFGLAREETV-------TEMMTAETGTYRWMAPELYSTVTLRQGEKKHY-NNKVDV   70 (198)
Q Consensus         2 H~dlKp~NIll~~~~~---~~kl~DfGla~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~~~~Dv   70 (198)
                      |||||.+|||+.-++.   .+.|+|||.+--...       ....-..-|.-..||||+....   .+..... -.++|.
T Consensus       364 hRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~---PGp~avvny~kAD~  440 (598)
T KOG4158|consen  364 HRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV---PGPNAVVNYEKADT  440 (598)
T ss_pred             hhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC---CCCceeeccchhhh
Confidence            9999999999965432   468999998742111       1111223477889999987531   1111111 248999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+.|.+.||++....||++............+...|.+|+.+++.+++++..+|..||++|++..=....|+-+++.
T Consensus       441 WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~  517 (598)
T KOG4158|consen  441 WAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWR  517 (598)
T ss_pred             hhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhc
Confidence            99999999999999999875443333344556677889999999999999999999999999977766666655553

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.68  E-value=3e-17  Score=135.87  Aligned_cols=136  Identities=24%  Similarity=0.390  Sum_probs=99.7

Q ss_pred             CCCCCCCCeEEcCCCCceEEecccCcccCc---cc--ccccCCCCccceecccccccccccccccCCCC-chhhHHHHHH
Q 029154            2 GKFMKEDNLLLTPDQKSLKLADFGLAREET---VT--EMMTAETGTYRWMAPELYSTVTLRQGEKKHYN-NKVDVYSFGI   75 (198)
Q Consensus         2 H~dlKp~NIll~~~~~~~kl~DfGla~~~~---~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~-~~~Dvws~G~   75 (198)
                      |||||++|+++..+ +.+||+|||.+....   ..  ......+|+..|+|||++.+        ..|+ ...||||.|+
T Consensus       443 hrdlK~enll~~~~-g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~--------~~ydpr~vDiwS~~i  513 (601)
T KOG0590|consen  443 HRDLKLENLLVTEN-GILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTG--------KEYDPRAVDVWSCGI  513 (601)
T ss_pred             eccCccccEEEecC-CceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccc--------cccCcchhhhhhccc
Confidence            99999999999977 689999999986322   11  23455789999999999864        3444 4699999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHH-------HccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAA-------FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~-------~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +++.|.+|+.||.--...+..+...       .......+...++.+.+.++.++|+.||.+|.+++++++  ..|+...
T Consensus       514 i~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~--d~W~~~i  591 (601)
T KOG0590|consen  514 IYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN--DEWIRSI  591 (601)
T ss_pred             eEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh--ChHhhhc
Confidence            9999999999996433322211000       001111223346778899999999999999999999998  6676543

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.67  E-value=3.1e-17  Score=129.36  Aligned_cols=123  Identities=29%  Similarity=0.453  Sum_probs=86.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-------cccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      ||||+||.||....+ ..+||+|||+........       ..+..+||..||+||.+.+        ..|+.++|||+|
T Consensus       378 ihrdlkp~nif~~~d-~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g--------~~y~~kvdIyaL  448 (516)
T KOG1033|consen  378 IHRDLKPSNIFFSDD-DQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG--------QQYSEKVDIYAL  448 (516)
T ss_pred             hhhhccccccccccc-hhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh--------hhhhhhcchhhH
Confidence            699999999999876 689999999986443222       2345689999999999975        789999999999


Q ss_pred             HHHHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHH
Q 029154           74 GIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ  136 (198)
Q Consensus        74 G~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~  136 (198)
                      |++++|++. -...+.......+    ...+..++....-.++-..|+.+++...|.+||++.+
T Consensus       449 Glil~EL~~~f~T~~er~~t~~d----~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  449 GLILAELLIQFSTQFERIATLTD----IRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             HHHHHHHHHHhccHHHHHHhhhh----hhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence            999999987 3334432222111    1111111111112345579999999999999995443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.64  E-value=3.4e-16  Score=132.02  Aligned_cols=136  Identities=25%  Similarity=0.423  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----------------cccCCCCccceecccccccccccccccCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----------------MMTAETGTYRWMAPELYSTVTLRQGEKKHY   64 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~   64 (198)
                      +|||+||+|.||..- +++|+.|||+++......                .-+..+||+.|.|||++..        +.|
T Consensus       165 vhrdlkpdnllIT~m-GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr--------qgy  235 (1205)
T KOG0606|consen  165 VHRDLKPDNLLITSM-GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR--------QGY  235 (1205)
T ss_pred             ecCCCCCCcceeeec-ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh--------hcc
Confidence            699999999999966 789999999987322110                0123489999999999863        778


Q ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHc--cCCCCCCCCCcHHHHHHHHHhcccCCCCC-CCHHHHHHHH
Q 029154           65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGLPEDISPDLAFIVQSCWVEDPNLR-PSFSQIIRML  141 (198)
Q Consensus        65 ~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~l~~~~l~~dp~~R-ps~~~~l~~l  141 (198)
                      +..+|+|++|+++||.+-|..||.+..+... +...+.  ..-++-.+..++++++++.++|..+|..| -+..++.-.-
T Consensus       236 gkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~  314 (1205)
T KOG0606|consen  236 GKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQ  314 (1205)
T ss_pred             CCCccHHHHHHHHHHHheeeeeccCCCHHHH-HhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhh
Confidence            9999999999999999999999998765332 221111  11112244578999999999999999999 3444333333


Q ss_pred             HHHHh
Q 029154          142 NAFLF  146 (198)
Q Consensus       142 ~~~~~  146 (198)
                      |.++.
T Consensus       315 h~ff~  319 (1205)
T KOG0606|consen  315 HGFFQ  319 (1205)
T ss_pred             cccee
Confidence            44443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.63  E-value=7.6e-16  Score=111.25  Aligned_cols=100  Identities=36%  Similarity=0.645  Sum_probs=81.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||+|.||+++...+.++|+|||.+....... ......+...|++||.+..       ...++.+.|+|++|+++++
T Consensus       114 ~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-------~~~~~~~~D~~~lg~~~~~  186 (215)
T cd00180         114 IHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLG-------KGYYSEKSDIWSLGVILYE  186 (215)
T ss_pred             eccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcc-------cCCCCchhhhHHHHHHHHH
Confidence            5999999999999723679999999987543321 1223457788999998753       1266789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      +                                 ..+.+++.+|+..+|++||++.++++.
T Consensus       187 l---------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         187 L---------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             H---------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            8                                 688999999999999999999999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.2e-16  Score=128.26  Aligned_cols=114  Identities=30%  Similarity=0.508  Sum_probs=93.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||+|++||+++.+ |++++.|||+++.......   .|||..|||||++.          .....+|+||||++.+|+
T Consensus       119 iyrd~k~enilld~~-Ghi~~tdfglske~v~~~~---~cgt~eymApEI~~----------gh~~a~D~ws~gvl~fel  184 (612)
T KOG0603|consen  119 AYRDYKLENVLLLLE-GHIKLTDFGLSKEAVKEKI---ACGTYEYRAPEIIN----------GHLSAADWWSFGVLAFEL  184 (612)
T ss_pred             HHhcccccceeeccc-CccccCCchhhhHhHhhhh---cccchhhhhhHhhh----------ccCCcccchhhhhhHHHH
Confidence            589999999999987 7899999999986543322   28999999999984          356788999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF  134 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~  134 (198)
                      ++|..||.+     . ....+....+..|..++..+.+++..++..+|..|.-.
T Consensus       185 ltg~~pf~~-----~-~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  185 LTGTLPFGG-----D-TMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hhCCCCCch-----H-HHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            999999987     1 12222334566788899999999999999999999644

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.62  E-value=2.8e-16  Score=120.75  Aligned_cols=137  Identities=23%  Similarity=0.334  Sum_probs=92.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc-cCcc-------c-------c------------------c------------
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR-EETV-------T-------E------------------M------------   35 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~-~~~~-------~-------~------------------~------------   35 (198)
                      |||||||+|+|.+...+.-.|.|||++. ....       .       .                  .            
T Consensus       154 vHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~  233 (418)
T KOG1167|consen  154 VHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSE  233 (418)
T ss_pred             cccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccce
Confidence            7999999999998766667899999986 1000       0       0                  0            


Q ss_pred             ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHH--------------H-
Q 029154           36 MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA--------------A-  100 (198)
Q Consensus        36 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~--------------~-  100 (198)
                      .....||++|.|||++..       ...-+++.|+||.|+++..++++..||............              . 
T Consensus       234 ~anrAGT~GfRaPEvL~k-------~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l  306 (418)
T KOG1167|consen  234 RANRAGTPGFRAPEVLFR-------CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAAL  306 (418)
T ss_pred             ecccCCCCCCCchHHHhh-------ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhc
Confidence            001258999999999864       345688999999999999999999998522111100000              0 


Q ss_pred             ------Hc---------------cC-----CC-CC--------CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154          101 ------FK---------------HA-----RP-GL--------PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus       101 ------~~---------------~~-----~~-~~--------p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                            ++               ..     .. +.        -+..+..+.+++.+|+..||.+|.++++.|+  |.++
T Consensus       307 ~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk--HpFF  384 (418)
T KOG1167|consen  307 PGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK--HPFF  384 (418)
T ss_pred             CCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc--CcCC
Confidence                  00               00     00 00        1123457889999999999999999999998  5554


Q ss_pred             h
Q 029154          146 F  146 (198)
Q Consensus       146 ~  146 (198)
                      .
T Consensus       385 ~  385 (418)
T KOG1167|consen  385 D  385 (418)
T ss_pred             c
Confidence            3

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.58  E-value=4.8e-16  Score=123.97  Aligned_cols=80  Identities=24%  Similarity=0.467  Sum_probs=68.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      ||||||-+|++++.+ +.+||+|||.+.+.. +..+.+++||..|+|||++.+       ..+.+...|||++|+++|.+
T Consensus       692 vhrdikdenvivd~~-g~~klidfgsaa~~k-sgpfd~f~gtv~~aapevl~g-------~~y~gk~qdiwalgillyti  762 (772)
T KOG1152|consen  692 VHRDIKDENVIVDSN-GFVKLIDFGSAAYTK-SGPFDVFVGTVDYAAPEVLGG-------EKYLGKPQDIWALGILLYTI  762 (772)
T ss_pred             eecccccccEEEecC-CeEEEeeccchhhhc-CCCcceeeeeccccchhhhCC-------CccCCCcchhhhhhheeeEE
Confidence            799999999999977 789999999886533 344677899999999999865       34556779999999999999


Q ss_pred             HcCCCCCCC
Q 029154           81 LTNRLPFEG   89 (198)
Q Consensus        81 ~~g~~p~~~   89 (198)
                      +....||++
T Consensus       763 vykenpyyn  771 (772)
T KOG1152|consen  763 VYKENPYYN  771 (772)
T ss_pred             EeccCCCcC
Confidence            999999864

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.56  E-value=8.9e-15  Score=107.20  Aligned_cols=81  Identities=40%  Similarity=0.621  Sum_probs=65.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||+|+||+++.+ ..++|+|||++.......  ......++..|++||.+..       ...++.++|+|+||++++
T Consensus       120 ~h~di~~~ni~v~~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-------~~~~~~~~Dv~~lG~~~~  191 (225)
T smart00221      120 VHRDLKPENILLGMD-GLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLG-------GKGYGEAVDIWSLGVILY  191 (225)
T ss_pred             ecCCCCHHHEEEcCC-CCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcC-------CCCCCchhhHHHHHHHHH
Confidence            599999999999976 679999999987544322  2234567788999998731       356677999999999999


Q ss_pred             HHHcCCCCCCC
Q 029154           79 ELLTNRLPFEG   89 (198)
Q Consensus        79 e~~~g~~p~~~   89 (198)
                      ++++|+.||..
T Consensus       192 ~l~~g~~pf~~  202 (225)
T smart00221      192 ELLWGPEPFSG  202 (225)
T ss_pred             HHHHCCCCccc
Confidence            99999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.53  E-value=6.9e-14  Score=107.24  Aligned_cols=135  Identities=30%  Similarity=0.421  Sum_probs=96.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-------cccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      +|||+||+||+++.....++++|||+++......       ......|+..|++||.+.+..     ...+....|+|++
T Consensus       123 ~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~-----~~~~~~~~D~~s~  197 (384)
T COG0515         123 IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS-----LAYASSSSDIWSL  197 (384)
T ss_pred             eccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCC-----CCCCCchHhHHHH
Confidence            6999999999999763369999999987433221       235678999999999875300     0467889999999


Q ss_pred             HHHHHHHHcCCCCCCCCCc---HHHHHHHHHccCCC----CCCCCC----cHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           74 GIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARP----GLPEDI----SPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~---~~~~~~~~~~~~~~----~~p~~~----~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      |++++++++|..||.....   .............+    ......    ...+.+++.+++..+|..|.+..+....
T Consensus       198 g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         198 GITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            9999999999999876653   22333332222222    111111    1578899999999999999988876663

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.52  E-value=1.5e-15  Score=114.46  Aligned_cols=121  Identities=23%  Similarity=0.295  Sum_probs=74.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceeccccccccc-ccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVT-LRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      ||+||||+|++++.+ +.+.|+||+.....+.....  ...+..|.+||...... +.. ....++.+.|.|++|+++|.
T Consensus       167 VHgdi~~~nfll~~~-G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~-~~~~~t~~~DaW~LG~~ly~  242 (288)
T PF14531_consen  167 VHGDIKPENFLLDQD-GGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQ-NNAPYTFATDAWQLGITLYS  242 (288)
T ss_dssp             EEST-SGGGEEE-TT-S-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHH-SEEEE-HHHHHHHHHHHHHH
T ss_pred             EecccceeeEEEcCC-CCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCc-ccceeeeccCHHHHHHHHHH
Confidence            699999999999987 78999999877654432221  23457789999764310 000 12356889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++++..||..........      ........+++.++.||.++|+.+|.+|
T Consensus       243 lWC~~lPf~~~~~~~~~~------~~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  243 LWCGRLPFGLSSPEADPE------WDFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHSS-STCCCGGGSTSG------GGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             HHHccCCCCCCCcccccc------ccchhcCCcCHHHHHHHHHHccCCcccC
Confidence            999999997544211110      0111222688899999999999999887

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=2.2e-14  Score=112.54  Aligned_cols=123  Identities=23%  Similarity=0.319  Sum_probs=84.2

Q ss_pred             CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCC---CCC--
Q 029154           17 KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMS--   91 (198)
Q Consensus        17 ~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~---~~~--   91 (198)
                      ..+||+|||-|....  ..++..+-|..|.|||++.+        ..|++.+||||++|+++|++||...|.   +..  
T Consensus       391 i~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllG--------sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~  460 (590)
T KOG1290|consen  391 IRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLG--------SGYSTSADIWSTACMAFELATGDYLFEPHSGENYS  460 (590)
T ss_pred             eeEEEeeccchhhhh--hhhchhhhhhhccCcceeec--------CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCC
Confidence            469999999886432  22345567899999999976        678999999999999999999987663   221  


Q ss_pred             cHHHHHHH---HHccCCC--------------------------------------CCCCCCcHHHHHHHHHhcccCCCC
Q 029154           92 NLQAAYAA---AFKHARP--------------------------------------GLPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        92 ~~~~~~~~---~~~~~~~--------------------------------------~~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      ...+-...   +....+.                                      .++..-..++.+|+.-||+.+|.+
T Consensus       461 rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeK  540 (590)
T KOG1290|consen  461 RDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEK  540 (590)
T ss_pred             ccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccc
Confidence            11111111   1100000                                      001111345778999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCC
Q 029154          131 RPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       131 Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      ||||.+.++  +.|+.....+
T Consensus       541 R~tA~~cl~--hPwLn~~~~~  559 (590)
T KOG1290|consen  541 RPTAAQCLK--HPWLNPVAGP  559 (590)
T ss_pred             cccHHHHhc--CccccCCCCC
Confidence            999999998  8887755444

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.48  E-value=1.5e-13  Score=101.18  Aligned_cols=127  Identities=25%  Similarity=0.533  Sum_probs=98.2

Q ss_pred             CCCCCeEEcCCCCceEEe--cccCcccCcccccccCCCCccceecccccccccccccccCCC-CchhhHHHHHHHHHHHH
Q 029154            5 MKEDNLLLTPDQKSLKLA--DFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY-NNKVDVYSFGIVLWELL   81 (198)
Q Consensus         5 lKp~NIll~~~~~~~kl~--DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~~~~Dvws~G~~l~e~~   81 (198)
                      |....++|+.+ ..++|.  |--++-.      ......++.||+||.+..      ..... -..+|+|||++++||+.
T Consensus       317 lns~hvmided-ltarismad~kfsfq------e~gr~y~pawmspealqr------kped~n~raadmwsfaillwel~  383 (448)
T KOG0195|consen  317 LNSKHVMIDED-LTARISMADTKFSFQ------EVGRAYSPAWMSPEALQR------KPEDLNIRAADMWSFAILLWELN  383 (448)
T ss_pred             cccceEEecch-hhhheecccceeeee------ccccccCcccCCHHHHhc------CchhcchhhhhHHHHHHHHHHhh
Confidence            45667777755 445443  3322211      123345789999998753      11111 24789999999999999


Q ss_pred             cCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           82 TNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        82 ~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |...||....++..-.....++.++.+|+.++.....|+.-|+..||.+||.++.++..|+..
T Consensus       384 trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  384 TREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             ccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            999999998888877888889999999999999999999999999999999999999988764

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.46  E-value=1.3e-12  Score=101.63  Aligned_cols=140  Identities=19%  Similarity=0.253  Sum_probs=99.5

Q ss_pred             CCCCCCCCCeEEcCCC----CceEEecccCcc--cCcccc-----c----ccCCCCccceecccccccccccccccCCCC
Q 029154            1 MGKFMKEDNLLLTPDQ----KSLKLADFGLAR--EETVTE-----M----MTAETGTYRWMAPELYSTVTLRQGEKKHYN   65 (198)
Q Consensus         1 iH~dlKp~NIll~~~~----~~~kl~DfGla~--~~~~~~-----~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~   65 (198)
                      |||||||+|++++...    ..+.|.|||+++  ......     .    .....||..|+++.+..+        ...+
T Consensus       144 iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~--------~e~~  215 (322)
T KOG1164|consen  144 IHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG--------IEQG  215 (322)
T ss_pred             ccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC--------CccC
Confidence            7999999999998653    458999999998  321111     1    123459999999997653        5678


Q ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCcHHHH--HHHHHccCCCC-CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           66 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAA--YAAAFKHARPG-LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        66 ~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~--~~~~~~~~~~~-~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      .+.|+||++.++.++..|..||.+.......  ........... .....+.++..+...+-..+...+|....+...|.
T Consensus       216 r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~  295 (322)
T KOG1164|consen  216 RRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLK  295 (322)
T ss_pred             CchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHH
Confidence            8999999999999999999999765532211  11111111111 23445677788888777789999999999999887


Q ss_pred             HHHhhc
Q 029154          143 AFLFTL  148 (198)
Q Consensus       143 ~~~~~~  148 (198)
                      ......
T Consensus       296 ~~~~~~  301 (322)
T KOG1164|consen  296 DVFDSE  301 (322)
T ss_pred             HHHHhc
Confidence            766544

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.45  E-value=1.9e-13  Score=116.26  Aligned_cols=135  Identities=22%  Similarity=0.260  Sum_probs=87.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC----ccccc----ccCCCCccceeccccccccc--ccccccCC-CCchhh
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE----TVTEM----MTAETGTYRWMAPELYSTVT--LRQGEKKH-YNNKVD   69 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~----~~~~~----~~~~~gt~~y~aPE~~~~~~--~~~~~~~~-~~~~~D   69 (198)
                      .|+|||.|||||..= +.+.|+||...+..    .+...    +.+...-.+|.|||.+....  ........ .+++.|
T Consensus       142 cHGDIKsENILiTSW-NW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMD  220 (1431)
T KOG1240|consen  142 CHGDIKSENILITSW-NWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMD  220 (1431)
T ss_pred             cccccccceEEEeee-chhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhh
Confidence            499999999999865 35899999877621    11111    12233345899999986521  11111222 578999


Q ss_pred             HHHHHHHHHHHHc-CCCCCCCCCcHHHHHHHHHcc-CCCC-C-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           70 VYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKH-ARPG-L-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        70 vws~G~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~-~~~~-~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      |||+||++.|+++ |+++|.    ..+........ ..+. + -..-+..+++++..|++.||++|.++++.|+-
T Consensus       221 IFS~GCViaELf~Eg~PlF~----LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  221 IFSAGCVIAELFLEGRPLFT----LSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             hhhhhHHHHHHHhcCCCccc----HHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            9999999999986 788884    22221111110 0000 0 01124578999999999999999999999875

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.37  E-value=6.6e-13  Score=106.33  Aligned_cols=144  Identities=31%  Similarity=0.453  Sum_probs=96.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      .|+.|+..|.+++.. +.+||.|||+.......   .......-..-|.|||.+....... .....+.+.|+||||+++
T Consensus        71 ~hg~l~s~nClvd~~-w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~-~~~~~~~~gdiYs~~ii~  148 (484)
T KOG1023|consen   71 YHGALKSSNCLVDSR-WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQS-LESALTQKGDIYSFGIIM  148 (484)
T ss_pred             eeeeeccccceeeee-EEEEechhhhcccccccccccccchhHHHHhccCHHHhccccccc-ccccccccCCeehHHHHH
Confidence            499999999999966 89999999998654321   1111112345799999986521111 011246789999999999


Q ss_pred             HHHHcCCCCCCCCCcHH---HHHHHHHc-cCCCCCCC-----CCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQ---AAYAAAFK-HARPGLPE-----DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~---~~~~~~~~-~~~~~~p~-----~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +|+++...||.......   ........ ...+..|.     ...+++..++..||..+|.+||+++++-..+.....
T Consensus       149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  149 YEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             HHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            99999999997532211   12222222 22222221     355679999999999999999999999887765543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.20  E-value=8.1e-11  Score=85.49  Aligned_cols=138  Identities=20%  Similarity=0.272  Sum_probs=94.6

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      |||||||+|.|..-+.  ..+-++|||+++...+...        -....||..|++-....+        ..-+.+-|+
T Consensus       133 iHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g--------~eqSRRDDm  204 (341)
T KOG1163|consen  133 IHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG--------IEQSRRDDM  204 (341)
T ss_pred             ccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhh--------hhhhhhhhh
Confidence            7999999999997542  3477999999985433221        123468999988665432        234667899


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHHHH-HHHHHccCCC-----CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQAA-YAAAFKHARP-----GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~~~-~~~~~~~~~~-----~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      =|+|.++...-.|..||++....... ....+.....     .+...++.++...+.-|-...-.+-|...-+.+...-+
T Consensus       205 eSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL  284 (341)
T KOG1163|consen  205 ESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL  284 (341)
T ss_pred             hhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence            99999999888999999987743322 1111222222     22345788888889888888888889887776655544


Q ss_pred             Hh
Q 029154          145 LF  146 (198)
Q Consensus       145 ~~  146 (198)
                      +.
T Consensus       285 fr  286 (341)
T KOG1163|consen  285 FR  286 (341)
T ss_pred             Hh
Confidence            43

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.12  E-value=1.1e-11  Score=103.16  Aligned_cols=132  Identities=29%  Similarity=0.329  Sum_probs=97.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc----cccccCCCC-ccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV----TEMMTAETG-TYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~----~~~~~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      .|||+||+|.+++.++...++.|||++.....    .......+| ++.|++||...+       ........|+||+|+
T Consensus       146 ~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~-------~~~~~~~~d~~S~g~  218 (601)
T KOG0590|consen  146 THRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSG-------KAYRGPSVDVWSLGI  218 (601)
T ss_pred             ccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccc-------hhhcCCCcccccccc
Confidence            49999999999997732799999999974433    222344678 999999998753       234567899999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccC---CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHA---RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++..+++|..|+.........+.......   .......++....+++.+++..+|..|.+.+++..
T Consensus       219 ~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  219 VLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            99999999999865443332222222221   12335568889999999999999999999888766

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.10  E-value=9.1e-10  Score=83.48  Aligned_cols=139  Identities=20%  Similarity=0.305  Sum_probs=96.9

Q ss_pred             CCCCCCCCCeEEcCC----CCceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchh
Q 029154            1 MGKFMKEDNLLLTPD----QKSLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV   68 (198)
Q Consensus         1 iH~dlKp~NIll~~~----~~~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~   68 (198)
                      |-|||||+|.||..-    ...+-++|||+++...+...        .+...||..||+-....+        ..-+.+-
T Consensus       146 IYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG--------rEQSRRD  217 (449)
T KOG1165|consen  146 IYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG--------REQSRRD  217 (449)
T ss_pred             eecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecccc--------chhhhhh
Confidence            569999999999753    23578999999985543321        234569999999776653        4557788


Q ss_pred             hHHHHHHHHHHHHcCCCCCCCCCcH--HHHHHHHHccCCC----CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           69 DVYSFGIVLWELLTNRLPFEGMSNL--QAAYAAAFKHARP----GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        69 Dvws~G~~l~e~~~g~~p~~~~~~~--~~~~~~~~~~~~~----~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |+=++|=+++..+.|..||+|....  ...+...-+..+.    .+.+.++.++..-+.-.-.++-.+-|..+-+...+.
T Consensus       218 DLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~  297 (449)
T KOG1165|consen  218 DLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFD  297 (449)
T ss_pred             hHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            9999999999999999999987632  2222222111111    223457778877777666777778899887777766


Q ss_pred             HHHhh
Q 029154          143 AFLFT  147 (198)
Q Consensus       143 ~~~~~  147 (198)
                      +++..
T Consensus       298 dvldr  302 (449)
T KOG1165|consen  298 DVLDR  302 (449)
T ss_pred             HHHHh
Confidence            66643

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.91  E-value=8e-10  Score=79.88  Aligned_cols=81  Identities=19%  Similarity=0.122  Sum_probs=54.7

Q ss_pred             CCCCC-CCCCeEEcCCCCceEEecccCcccCccccc-----c--------cC-CCCccceecccccccccccccccCCCC
Q 029154            1 MGKFM-KEDNLLLTPDQKSLKLADFGLAREETVTEM-----M--------TA-ETGTYRWMAPELYSTVTLRQGEKKHYN   65 (198)
Q Consensus         1 iH~dl-Kp~NIll~~~~~~~kl~DfGla~~~~~~~~-----~--------~~-~~gt~~y~aPE~~~~~~~~~~~~~~~~   65 (198)
                      ||||| ||+|||++.+ +.++|+|||++........     .        +. ..+++.|+.|+.-..       -...+
T Consensus       113 vHrDL~kp~NILv~~~-g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~-------l~~~~  184 (218)
T PRK12274        113 AHNDLAKEANWLVQED-GSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRV-------LKRTS  184 (218)
T ss_pred             ccCCCCCcceEEEcCC-CCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhh-------hccch
Confidence            79999 7999999866 6799999999974332210     0        00 125667777764321       11223


Q ss_pred             -chhhHHHHHHHHHHHHcCCCCCCC
Q 029154           66 -NKVDVYSFGIVLWELLTNRLPFEG   89 (198)
Q Consensus        66 -~~~Dvws~G~~l~e~~~g~~p~~~   89 (198)
                       ...++++.|+-+|.++|+..++.+
T Consensus       185 ~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        185 WIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             hHHHHHHHhcchHHHHHhccCCccc
Confidence             345667889999999999887644

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.86  E-value=6.1e-09  Score=89.68  Aligned_cols=127  Identities=18%  Similarity=0.221  Sum_probs=86.5

Q ss_pred             CCCCCCCCCeEEcCC------CCceEEecccCcccC---cccccccCCCCccceecccccccccccccccCCCCchhhHH
Q 029154            1 MGKFMKEDNLLLTPD------QKSLKLADFGLAREE---TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVY   71 (198)
Q Consensus         1 iH~dlKp~NIll~~~------~~~~kl~DfGla~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvw   71 (198)
                      ||+||||+|.||...      ...++|+|||-+..+   .+...+...++|-.+-++|...        ++..++..|.|
T Consensus       816 IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~--------grpWtYq~Dyf  887 (974)
T KOG1166|consen  816 IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMRE--------GRPWTYQIDYF  887 (974)
T ss_pred             ecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhc--------CCCCchhhhhH
Confidence            899999999999542      235899999998633   3344566678888999999875        47889999999


Q ss_pred             HHHHHHHHHHcCCCC-CCCCCcHHHHHHHHHccCCCCCCCCCcHHHH-HHHHHhcccCCCCC--CCHHHHHHHHHHHHh
Q 029154           72 SFGIVLWELLTNRLP-FEGMSNLQAAYAAAFKHARPGLPEDISPDLA-FIVQSCWVEDPNLR--PSFSQIIRMLNAFLF  146 (198)
Q Consensus        72 s~G~~l~e~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~l~~~~l~~dp~~R--ps~~~~l~~l~~~~~  146 (198)
                      .++.+++-|+.|+.- +.+..         .......++..+..+++ .++..+|.  |+.+  |...++...++.++.
T Consensus       888 GlAa~~h~mLFG~y~q~~~g~---------~~~~~~~~~Ry~~~~~W~~~F~~lLN--~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  888 GLAATVHVMLFGKYMEVKNGS---------SWMVKTNFPRYWKRDMWNKFFDLLLN--PDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             HHHHHHHHHHHHHHHHhcCCc---------ceeccccchhhhhHHHHHHHHHHHhC--cCcccchhHHHHHHHHHHHHH
Confidence            999999999988532 11000         00111113444555555 46677776  4444  677777777766654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.82  E-value=1.7e-09  Score=84.93  Aligned_cols=52  Identities=23%  Similarity=0.217  Sum_probs=39.4

Q ss_pred             CCCCC-CCCCeEEcCCCCceEEecccCcccCcccc---------cccCCCCccceeccccccc
Q 029154            1 MGKFM-KEDNLLLTPDQKSLKLADFGLAREETVTE---------MMTAETGTYRWMAPELYST   53 (198)
Q Consensus         1 iH~dl-Kp~NIll~~~~~~~kl~DfGla~~~~~~~---------~~~~~~gt~~y~aPE~~~~   53 (198)
                      ||||| ||+|||++.+ +.+||+|||+++......         ......+++.|++||.+..
T Consensus       133 iHrDL~KP~NILv~~~-~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        133 THNDLAKPQNWLMGPD-GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             eeCCCCCcceEEEcCC-CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            69999 9999999866 679999999998443221         1134467888999998754

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.81  E-value=7e-09  Score=88.81  Aligned_cols=126  Identities=25%  Similarity=0.330  Sum_probs=92.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-------c---c----------------------ccccCCCCccceecc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-------V---T----------------------EMMTAETGTYRWMAP   48 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-------~---~----------------------~~~~~~~gt~~y~aP   48 (198)
                      +|+|+||.|+|+..+ ++.++.|||......       .   .                      .......||+.|.+|
T Consensus       926 ~h~~~~p~~~l~~~~-gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laP 1004 (1205)
T KOG0606|consen  926 KHRDLKPDSLLIAYD-GHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAP 1004 (1205)
T ss_pred             hcccccccchhhccc-CCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCC
Confidence            599999999999976 789999998432100       0   0                      001224689999999


Q ss_pred             cccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccC
Q 029154           49 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        49 E~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~d  127 (198)
                      |...+        ......+|+|++|++++|.++|.+||....+.+........... +.-+...+++.++++.+.+..+
T Consensus      1005 e~~lg--------~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~ 1076 (1205)
T KOG0606|consen 1005 EILLG--------RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEE 1076 (1205)
T ss_pred             ccccc--------ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccC
Confidence            99865        45577889999999999999999999877664443222211122 2335668899999999999999


Q ss_pred             CCCCCCHH
Q 029154          128 PNLRPSFS  135 (198)
Q Consensus       128 p~~Rps~~  135 (198)
                      +.+|..+.
T Consensus      1077 ~~qr~~a~ 1084 (1205)
T KOG0606|consen 1077 PTQRLGAK 1084 (1205)
T ss_pred             chhccCcc
Confidence            99996655

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.78  E-value=1.5e-09  Score=92.18  Aligned_cols=68  Identities=24%  Similarity=0.272  Sum_probs=49.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++...... .....++|+.|++||....       ...-...+++|++|+-
T Consensus       126 iHrDLKP~NILl~~~-g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~-------~~~~~~~s~~~s~g~~  194 (669)
T cd05610         126 IHRDLKPDNMLISNE-GHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYS-------RTPGQVLSLISSLGFN  194 (669)
T ss_pred             EeCCccHHHEEEcCC-CCEEEEeCCCCccccCCcccccccccCccccCcccccc-------CCCCceeeeeeecCcC
Confidence            699999999999976 689999999998543322 2334678999999997532       1222345677888743

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.64  E-value=3.1e-09  Score=78.12  Aligned_cols=59  Identities=17%  Similarity=0.281  Sum_probs=40.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|||+||+||+++.+ + ++|+|||..+.........      .     .+.        ...|..++|+|+||+++.-.
T Consensus       157 ~H~Dikp~Nili~~~-g-i~liDfg~~~~~~e~~a~d------~-----~vl--------er~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        157 VSGDPHKGNFIVSKN-G-LRIIDLSGKRCTAQRKAKD------R-----IDL--------ERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             ccCCCChHHEEEeCC-C-EEEEECCCcccccchhhHH------H-----HHH--------HhHhcccccccceeEeehHH
Confidence            699999999999866 5 9999999876432211110      0     111        24456789999999877644

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.52  E-value=8e-08  Score=77.83  Aligned_cols=128  Identities=23%  Similarity=0.221  Sum_probs=87.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc------cCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM------TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      +|-|+||+||++..+....++.|||+..........      ...-|...|++||...         .-++...|++++|
T Consensus       244 ~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~---------~l~~~~~di~sl~  314 (524)
T KOG0601|consen  244 VHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN---------GLATFASDIFSLG  314 (524)
T ss_pred             cccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc---------cccchHhhhcchh
Confidence            589999999999976467899999998755433211      1124667899999974         4678899999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHc-cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      .++.+..++...+.......  +..... ..+.++....+..+...+..++..++..|++++.+..
T Consensus       315 ev~l~~~l~~~~~~~g~~~~--W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  315 EVILEAILGSHLPSVGKNSS--WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             hhhHhhHhhcccccCCCCCC--ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            99999988776554331100  000000 1222233345566777888999999999999887665

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.46  E-value=6.5e-08  Score=79.80  Aligned_cols=130  Identities=13%  Similarity=0.266  Sum_probs=87.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccccc-----C-----CCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMT-----A-----ETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~-----~-----~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      ||++|.|++|.++.+ +.+||+.|+++........+.     .     ..-...|.+||++..        ...+.++|+
T Consensus       122 VH~ni~p~~i~~na~-~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~--------~~~~~~sd~  192 (700)
T KOG2137|consen  122 VHGNIQPEAIVVNAN-GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG--------TTNTPASDV  192 (700)
T ss_pred             eecccchhheeeccC-cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc--------ccccccccc
Confidence            799999999999977 679999999886443321111     1     123457999999854        345789999


Q ss_pred             HHHHHHHHHHH-cCCCCCCCCCcHHHH--HHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           71 YSFGIVLWELL-TNRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        71 ws~G~~l~e~~-~g~~p~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +|+|+.+|.+. .|+.-+.+.......  ...............++.++.+-+.+++..+..-||++..+..
T Consensus       193 fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  193 FSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             eeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence            99999999988 455544433221110  0111111112234568899999999999999999997776655

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.33  E-value=4.4e-06  Score=66.07  Aligned_cols=141  Identities=19%  Similarity=0.352  Sum_probs=90.4

Q ss_pred             CCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHc
Q 029154            3 KFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT   82 (198)
Q Consensus         3 ~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~   82 (198)
                      +|+.++|+|+.++ ..+.|.|--......+...+...+|...|.+||...-.+   +....-+...|.|.+|+++++++.
T Consensus       141 GDVn~~~~lVsd~-~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~s---f~g~~r~~~hD~FGLavLiF~lL~  216 (637)
T COG4248         141 GDVNQNSFLVSDD-SKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPS---FVGFERTANHDNFGLAVLIFHLLF  216 (637)
T ss_pred             cccCccceeeecC-ceEEEEcccceeeccCCceEecccCccccCCHHHhcccc---ccccCCCccccchhHHHHHHHHHh
Confidence            7999999999966 568887643322223344455678999999999864211   122344678899999999999986


Q ss_pred             C-CCCCCCCCc-------HH-HH------HHHHHc-cCCC---CCC-CCCcHHHHHHHHHhcccC--CCCCCCHHHHHHH
Q 029154           83 N-RLPFEGMSN-------LQ-AA------YAAAFK-HARP---GLP-EDISPDLAFIVQSCWVED--PNLRPSFSQIIRM  140 (198)
Q Consensus        83 g-~~p~~~~~~-------~~-~~------~~~~~~-~~~~---~~p-~~~~~~~~~l~~~~l~~d--p~~Rps~~~~l~~  140 (198)
                      | +.||.|..-       .. +.      +..... +..+   ..| ..+++++..+..+|+...  +.-||+++..+..
T Consensus       217 ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aA  296 (637)
T COG4248         217 GGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAA  296 (637)
T ss_pred             cCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Confidence            5 899976431       11 00      000000 1111   112 236889999999998654  4589999987777


Q ss_pred             HHHHHhh
Q 029154          141 LNAFLFT  147 (198)
Q Consensus       141 l~~~~~~  147 (198)
                      |...-..
T Consensus       297 l~al~~~  303 (637)
T COG4248         297 LDALRQQ  303 (637)
T ss_pred             HHHHHHh
Confidence            6555443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.02  E-value=4e-06  Score=62.56  Aligned_cols=28  Identities=29%  Similarity=0.392  Sum_probs=24.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      +||||||+|||++.+ +.++|+|||.+..
T Consensus       164 ~HrDlkp~NILv~~~-~~v~LIDfg~~~~  191 (239)
T PRK01723        164 YHADLNAHNILLDPD-GKFWLIDFDRGEL  191 (239)
T ss_pred             CCCCCCchhEEEcCC-CCEEEEECCCccc
Confidence            699999999999876 5799999998754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.02  E-value=3.9e-06  Score=68.26  Aligned_cols=128  Identities=21%  Similarity=0.177  Sum_probs=82.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCcccee-cccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+|+||+||++..+++..++.|||.........  ....+.-.+. ..|.+.       +...+..+.|+++||..+.+
T Consensus       388 ~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~--~~~~~~~r~~p~~~~~~-------e~~~~~~~~~~~sl~~~~~e  458 (524)
T KOG0601|consen  388 VHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS--GVFHHIDRLYPIAEILL-------EDYPHLSKADIFSLGLSVDE  458 (524)
T ss_pred             hcccccccceeeccchhhhhccccccccccceec--ccccccccccccchhhc-------cccccccccccccccccccc
Confidence            6999999999999765668899999875322111  1112222333 244433       24566789999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ..++...-.....    ......+..+..+... .++..+...+...++..||.+.++..+.+
T Consensus       459 ~~~~~~ls~~~~~----~~~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  459 AITGSPLSESGVQ----SLTIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             cccCcccCccccc----ceeeecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcccch
Confidence            9988653322121    1111222233333333 78888999999999999999988776544

>smart00090 RIO RIO-like kinase

Probab=97.87  E-value=7.2e-06  Score=61.11  Aligned_cols=27  Identities=22%  Similarity=0.279  Sum_probs=23.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      +||||||+||+++ + +.++|+|||.+..
T Consensus       171 iH~Dikp~NIli~-~-~~i~LiDFg~a~~  197 (237)
T smart00090      171 VHGDLSEYNILVH-D-GKVVIIDVSQSVE  197 (237)
T ss_pred             EeCCCChhhEEEE-C-CCEEEEEChhhhc
Confidence            6999999999998 4 5799999998764

>PRK10345 hypothetical protein; Provisional

Probab=97.77  E-value=1.2e-05  Score=58.76  Aligned_cols=27  Identities=15%  Similarity=-0.057  Sum_probs=21.2

Q ss_pred             CCCCCCCCCeEEcCC---CCceEEecccCc
Q 029154            1 MGKFMKEDNLLLTPD---QKSLKLADFGLA   27 (198)
Q Consensus         1 iH~dlKp~NIll~~~---~~~~kl~DfGla   27 (198)
                      |||||||+|||++..   ...++|+||+-+
T Consensus       127 vhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        127 VTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             eecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            699999999999743   236999995443

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.62  E-value=2.5e-05  Score=65.06  Aligned_cols=27  Identities=30%  Similarity=0.507  Sum_probs=23.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      |||||||+|||++ + +.++|+|||+++.
T Consensus       450 iHrDlkp~NILl~-~-~~~~liDFGla~~  476 (535)
T PRK09605        450 VHGDLTTSNFIVR-D-DRLYLIDFGLGKY  476 (535)
T ss_pred             ccCCCChHHEEEE-C-CcEEEEeCccccc
Confidence            7999999999995 4 5699999999864

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.56  E-value=5.8e-05  Score=54.97  Aligned_cols=27  Identities=30%  Similarity=0.469  Sum_probs=23.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      +|+|++|+|||++ + +.++|+|||+++.
T Consensus       117 ~H~Dl~p~Nil~~-~-~~~~liDf~~a~~  143 (211)
T PRK14879        117 IHGDLTTSNMILS-G-GKIYLIDFGLAEF  143 (211)
T ss_pred             ccCCCCcccEEEE-C-CCEEEEECCcccC
Confidence            6999999999998 4 5699999998754

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.54  E-value=6e-05  Score=54.40  Aligned_cols=27  Identities=30%  Similarity=0.520  Sum_probs=23.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      +|+|+||+||+++ + +.+++.|||+++.
T Consensus       112 ~H~Dl~~~Nil~~-~-~~~~liDfg~a~~  138 (199)
T TIGR03724       112 VHGDLTTSNIIVR-D-DKLYLIDFGLGKY  138 (199)
T ss_pred             ecCCCCcceEEEE-C-CcEEEEECCCCcC
Confidence            6999999999998 4 6799999998864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.48  E-value=8.8e-05  Score=51.97  Aligned_cols=26  Identities=31%  Similarity=0.310  Sum_probs=22.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|++|.||+++ + +.++++|||.+.
T Consensus       110 ~HgD~~~~Nil~~-~-~~~~liDf~~a~  135 (170)
T cd05151         110 CHNDLLPGNFLLD-D-GRLWLIDWEYAG  135 (170)
T ss_pred             ecCCCCcCcEEEE-C-CeEEEEeccccc
Confidence            6999999999998 4 469999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.42  E-value=0.0001  Score=59.84  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=25.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET   31 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~   31 (198)
                      +|+|+||.||+++.+ +.++++|||++....
T Consensus       279 ~H~D~hPgNilv~~~-g~i~liDfG~~~~l~  308 (437)
T TIGR01982       279 FHADLHPGNIFVLKD-GKIIALDFGIVGRLS  308 (437)
T ss_pred             eeCCCCcccEEECCC-CcEEEEeCCCeeECC
Confidence            699999999999866 679999999986543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.18  E-value=0.00039  Score=53.55  Aligned_cols=126  Identities=15%  Similarity=0.178  Sum_probs=72.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc-----CcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE-----ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~-----~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      ||+++...-|++..+ +-+|+.--.....     ...........+-++|.+||.=.        .-..+..+|||+||+
T Consensus       200 ihgnlTc~tifiq~n-gLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~--------~tn~~~a~dIy~fgm  270 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHN-GLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGT--------TTNTTGASDIYKFGM  270 (458)
T ss_pred             ccCCcchhheeecCC-ceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCc--------ccccccchhhhhhhH
Confidence            699999999999865 5455542111110     00000111234567888888632        133467899999999


Q ss_pred             HHHHHHcCCCC-CCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           76 VLWELLTNRLP-FEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        76 ~l~e~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      +..+|..+..- -.+...........  .   ..-..-.+.-++++.+|+.-.|..||++.+++.+
T Consensus       271 cAlemailEiq~tnseS~~~~ee~ia--~---~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  271 CALEMAILEIQSTNSESKVEVEENIA--N---VIIGLENGLQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             HHHHHHHheeccCCCcceeehhhhhh--h---heeeccCccccCcCcccccCCCCCCcchhhhhcC
Confidence            99999876542 22111111000000  0   0001112334678899999999999999988764

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.08  E-value=0.00025  Score=58.80  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=25.8

Q ss_pred             CCCCCCCCCeEEcCCC---CceEEecccCcccCc
Q 029154            1 MGKFMKEDNLLLTPDQ---KSLKLADFGLAREET   31 (198)
Q Consensus         1 iH~dlKp~NIll~~~~---~~~kl~DfGla~~~~   31 (198)
                      +|+|+||.||+++.++   +.+++.|||+.....
T Consensus       282 fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        282 FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             eeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            6999999999998763   279999999987543

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.99  E-value=0.0006  Score=48.44  Aligned_cols=27  Identities=22%  Similarity=0.400  Sum_probs=23.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      ||+||.++||++..+  .+.++|||++..
T Consensus       114 vHGDLTtsNiIl~~~--~i~~IDfGLg~~  140 (204)
T COG3642         114 VHGDLTTSNIILSGG--RIYFIDFGLGEF  140 (204)
T ss_pred             ecCCCccceEEEeCC--cEEEEECCcccc
Confidence            799999999999854  399999999863

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.92  E-value=0.00063  Score=48.37  Aligned_cols=29  Identities=31%  Similarity=0.501  Sum_probs=24.4

Q ss_pred             CCCCCCCCCeEEcCCCCce--EEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSL--KLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~--kl~DfGla~~   29 (198)
                      ||+||..+||+|..++..+  -++|||++..
T Consensus       135 iHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  135 IHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             ecccccccceEEecCCCcCceEEEeecchhc
Confidence            7999999999998776554  7999999753

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.08  E-value=0.0011  Score=60.79  Aligned_cols=78  Identities=14%  Similarity=0.198  Sum_probs=62.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc-cCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR-EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|++||+-|.+|..+ ..+|++++|+.+ ........+...+++.|+.+++.+.        -.++.++|+|..++.+|+
T Consensus      1362 v~~~Lkf~lpmIVtn-y~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~--------ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1362 VSKSLKFTLPMIVTN-YNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE--------IKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred             hhhhhhhhccceecC-CcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH--------HhhhhHHHHHHHHHHHHH
Confidence            589999999999866 679999999998 3333344556678889999988642        456777999999999999


Q ss_pred             HHcCCCCC
Q 029154           80 LLTNRLPF   87 (198)
Q Consensus        80 ~~~g~~p~   87 (198)
                      ...|..+|
T Consensus      1433 rs~~n~~f 1440 (2724)
T KOG1826|consen 1433 RSDGNAYF 1440 (2724)
T ss_pred             HhcccHHH
Confidence            88777665

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=95.79  E-value=0.0076  Score=45.81  Aligned_cols=28  Identities=18%  Similarity=0.097  Sum_probs=23.1

Q ss_pred             CCCCCCCCCeEEcC------CCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTP------DQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~------~~~~~kl~DfGla~   28 (198)
                      +|+||++.|||++.      +...+.++||+.++
T Consensus       160 ~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        160 NHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             ccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            69999999999974      13568999999774

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.62  E-value=0.0069  Score=43.49  Aligned_cols=27  Identities=26%  Similarity=0.393  Sum_probs=20.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      ||+||.+.|||++.+  .+.|+|||-+..
T Consensus       129 vHGDLs~~NIlv~~~--~~~iIDf~qav~  155 (188)
T PF01163_consen  129 VHGDLSEYNILVDDG--KVYIIDFGQAVD  155 (188)
T ss_dssp             EESS-STTSEEEETT--CEEE--GTTEEE
T ss_pred             eecCCChhhEEeecc--eEEEEecCccee
Confidence            699999999999955  599999997643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.47  E-value=0.012  Score=42.89  Aligned_cols=29  Identities=24%  Similarity=0.317  Sum_probs=23.6

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~   29 (198)
                      +|+|+++.|||++.++  ..+.++||+-++.
T Consensus       140 ~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  140 YHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             CCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            6999999999999763  2588999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.10  E-value=0.011  Score=43.31  Aligned_cols=28  Identities=21%  Similarity=0.366  Sum_probs=17.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+.|.|||++.+++.+-|+||+.+.
T Consensus       169 ~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  169 IHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             E-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             EEeccccccceeeeccceeEEEecccce
Confidence            6999999999999433555799998653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK05231 homoserine kinase; Provisional

Probab=95.07  E-value=0.02  Score=44.49  Aligned_cols=27  Identities=26%  Similarity=0.296  Sum_probs=22.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+.+.|||++.+ ...-|+||+.+.
T Consensus       190 iHgD~~~~Nil~~~~-~~~~iIDf~~~~  216 (319)
T PRK05231        190 IHADLFRDNVLFEGD-RLSGFIDFYFAC  216 (319)
T ss_pred             CCCCCCCCcEEEECC-ceEEEEeccccc
Confidence            799999999999854 445799999764

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.90  E-value=0.025  Score=41.84  Aligned_cols=28  Identities=18%  Similarity=0.337  Sum_probs=23.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|||++.+++.+.++||-.+.
T Consensus       173 ~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         173 CHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            5999999999999622569999998664

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=94.89  E-value=0.023  Score=42.21  Aligned_cols=27  Identities=22%  Similarity=0.289  Sum_probs=22.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|||++.+ +..-|+||+.+.
T Consensus       167 ~HGD~~~~Nvlv~~~-~i~giIDw~~a~  193 (235)
T cd05155         167 FHGDLAPGNLLVQDG-RLSAVIDFGCLG  193 (235)
T ss_pred             EeCCCCCCcEEEECC-CEEEEEeCcccC
Confidence            699999999999854 445699999763

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.75  E-value=0.03  Score=40.09  Aligned_cols=27  Identities=22%  Similarity=0.349  Sum_probs=22.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      .|+|+.|+||++..+ + ++|+||+.+..
T Consensus        80 ~H~D~~~~N~~~~~~-~-~~lIDwe~a~~  106 (188)
T PRK10271         80 LHMDVHAGNLVHSAS-G-LRLIDWEYAGD  106 (188)
T ss_pred             ecCCCCCccEEEECC-C-EEEEeCCcccC
Confidence            599999999999855 4 89999998753

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=94.53  E-value=0.032  Score=43.03  Aligned_cols=28  Identities=36%  Similarity=0.425  Sum_probs=23.2

Q ss_pred             CCCCCCCCCeEEcCC---CCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPD---QKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~---~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|||++.+   .+.+.++||..+.
T Consensus       182 cH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         182 CHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             EecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            599999999999863   2468999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.44  E-value=0.035  Score=41.35  Aligned_cols=27  Identities=19%  Similarity=0.145  Sum_probs=22.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.|.|||++.+ +.+.|+||+.+.
T Consensus       166 ~HgD~~~~Nil~~~~-~~~~iIDwe~a~  192 (244)
T cd05150         166 THGDACLPNIIVDPG-KFSGFIDLGRLG  192 (244)
T ss_pred             ECCCCCCccEEEeCC-cEEEEEEccccc
Confidence            699999999999965 557899998663

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=94.42  E-value=0.38  Score=40.86  Aligned_cols=72  Identities=14%  Similarity=0.178  Sum_probs=47.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|++|.-+.|+++.+ +..||++|-++........ .....--..|..|+.+..          -.-..|.|.|||+++|
T Consensus       127 vHgNv~~~SVfVn~~-GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~----------s~~s~D~~~Lg~li~e  195 (690)
T KOG1243|consen  127 VHGNVCKDSVFVNES-GEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP----------SEWSIDSWGLGCLIEE  195 (690)
T ss_pred             eeccEeeeeEEEcCC-CcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc----------cccchhhhhHHHHHHH
Confidence            699999999999977 7799999987653322111 111111223555654421          1134699999999999


Q ss_pred             HHcC
Q 029154           80 LLTN   83 (198)
Q Consensus        80 ~~~g   83 (198)
                      ++.|
T Consensus       196 l~ng  199 (690)
T KOG1243|consen  196 LFNG  199 (690)
T ss_pred             HhCc
Confidence            9998

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=94.40  E-value=0.031  Score=42.70  Aligned_cols=28  Identities=18%  Similarity=0.292  Sum_probs=22.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+.+.|||++.++...-|.||+.+.
T Consensus       188 vHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         188 VHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             EeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            6999999999998643345699999764

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=94.27  E-value=0.034  Score=43.87  Aligned_cols=28  Identities=11%  Similarity=0.358  Sum_probs=23.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      .|+|+++.|||++.+.+.+.++||..+.
T Consensus       203 cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        203 CHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             EeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            4999999999998644579999998765

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.22  E-value=0.045  Score=42.40  Aligned_cols=26  Identities=27%  Similarity=0.304  Sum_probs=22.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLA   27 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla   27 (198)
                      +|+|+.+.||+++.+ +.+.|+||+.+
T Consensus       190 ~HgD~~~~Nvl~~~~-~~~~vIDfd~~  215 (307)
T TIGR00938       190 IHADLFPDNVLFDGD-SVKGVIDFYFA  215 (307)
T ss_pred             CCCCCCcCcEEEECC-ceEEEeecccc
Confidence            799999999999866 44679999875

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=94.18  E-value=0.033  Score=41.21  Aligned_cols=26  Identities=15%  Similarity=0.079  Sum_probs=22.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.|.||+++.+ + +.|+||+.+.
T Consensus       156 ~HgD~~~~Nii~~~~-~-~~iIDwe~a~  181 (226)
T TIGR02172       156 LHGDFQIGNLITSGK-G-TYWIDLGDFG  181 (226)
T ss_pred             EecCCCCCcEEEcCC-C-cEEEechhcC
Confidence            599999999999865 4 8999998764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=93.96  E-value=0.046  Score=41.11  Aligned_cols=26  Identities=35%  Similarity=0.466  Sum_probs=22.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.|.||+++.+ + +.|+||..+.
T Consensus       149 ~H~Dl~~~Nil~~~~-~-~~lIDwE~a~  174 (256)
T TIGR02721       149 LHMDVHAYNLVVTPQ-G-LKLIDWEYAS  174 (256)
T ss_pred             ecCCCCcCcEEEeCC-C-CEEEeccccC
Confidence            599999999999865 4 7899998764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=93.88  E-value=0.022  Score=47.99  Aligned_cols=73  Identities=22%  Similarity=0.221  Sum_probs=55.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+|    ||+...  +..|..||+............+..+++.|++||+...        ..+....|.|+.+.--.++
T Consensus       358 ~~~d----~~l~s~--~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~--------~~~~~~p~~~~~~~~~~~~  423 (829)
T KOG0576|consen  358 VHRD----NILGSE--EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQE--------NTIDGCPDSGSLAVSAIQM  423 (829)
T ss_pred             cCcc----cccccc--cccccccccCCcccCcccccccCCCCCCCCCchhhcc--------cccccCCCccCCCcchhhc
Confidence            3565    888874  4589999999876554444556789999999998753        5677888999999877777


Q ss_pred             HcCCCCC
Q 029154           81 LTNRLPF   87 (198)
Q Consensus        81 ~~g~~p~   87 (198)
                      .-|.+|-
T Consensus       424 ap~~pPr  430 (829)
T KOG0576|consen  424 APGLPPR  430 (829)
T ss_pred             CCCCCCC
Confidence            7666654

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.87  E-value=0.048  Score=41.87  Aligned_cols=27  Identities=26%  Similarity=0.277  Sum_probs=22.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.|.|||++.+ +.+.|.||+.+.
T Consensus       178 ~HgD~~~~Nil~~~~-~~~~iIDfe~a~  204 (296)
T cd05153         178 IHADLFRDNVLFDGD-ELSGVIDFYFAC  204 (296)
T ss_pred             CccCcCcccEEEeCC-ceEEEeehhhhc
Confidence            699999999999965 446799998753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=93.77  E-value=0.05  Score=42.66  Aligned_cols=28  Identities=25%  Similarity=0.304  Sum_probs=23.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+-|.||+++.+...+.+.||+-+.
T Consensus       200 IH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         200 IHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eecCCCccceeEcCCCCeeeEEEccccc
Confidence            7999999999999763347899999764

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.75  E-value=0.038  Score=40.27  Aligned_cols=27  Identities=26%  Similarity=0.397  Sum_probs=16.8

Q ss_pred             CCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            2 GKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         2 H~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      |.|+.+.|||++...+.++++||-.+.
T Consensus       147 HnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  147 HNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             -S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             eccCccccEEeccCCCeEEEecHHHHh
Confidence            999999999993333679999998764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=92.94  E-value=0.089  Score=38.00  Aligned_cols=28  Identities=21%  Similarity=0.347  Sum_probs=22.5

Q ss_pred             CCCCCCCCCeEEcCCCC----ceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQK----SLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~----~~kl~DfGla~   28 (198)
                      +|+|+.+.||++..++.    .+.+.||..++
T Consensus       123 ~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      123 NHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             eeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            59999999999975422    58899998764

subfamily of choline kinases

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=92.41  E-value=0.11  Score=40.68  Aligned_cols=27  Identities=26%  Similarity=0.374  Sum_probs=23.2

Q ss_pred             CCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            2 GKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         2 H~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      |.|+-+.|||++.+++.++++||..|.
T Consensus       186 HnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        186 HNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             ECCCCcccEEEeCCCCcEEEEcccccC
Confidence            999999999997554679999998774

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.99  E-value=0.071  Score=43.50  Aligned_cols=15  Identities=27%  Similarity=0.410  Sum_probs=13.3

Q ss_pred             CCCCCCCCCeEEcCC
Q 029154            1 MGKFMKEDNLLLTPD   15 (198)
Q Consensus         1 iH~dlKp~NIll~~~   15 (198)
                      ||.||||+||||..+
T Consensus       210 IHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  210 IHTDLKPENVLLCST  224 (590)
T ss_pred             cccCCCcceeeeecc
Confidence            799999999999754

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=91.55  E-value=0.21  Score=36.89  Aligned_cols=26  Identities=15%  Similarity=0.185  Sum_probs=22.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      .|+|..|.|+++..+  .+++.||+..+
T Consensus       157 ~HGD~hpgNFlv~~~--~i~iID~~~k~  182 (229)
T PF06176_consen  157 YHGDPHPGNFLVSNN--GIRIIDTQGKR  182 (229)
T ss_pred             ccCCCCcCcEEEECC--cEEEEECcccc
Confidence            599999999999854  49999998765

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PHA03111 Ser/Thr kinase; Provisional

Probab=91.09  E-value=0.16  Score=39.81  Aligned_cols=16  Identities=25%  Similarity=0.362  Sum_probs=13.5

Q ss_pred             CCCCCCCCCeEEcCCC
Q 029154            1 MGKFMKEDNLLLTPDQ   16 (198)
Q Consensus         1 iH~dlKp~NIll~~~~   16 (198)
                      +|-||||+|||+-.+.
T Consensus       305 ~H~DLKPdNILiFds~  320 (444)
T PHA03111        305 LHVDLKPDNILIFDSD  320 (444)
T ss_pred             eeccCCCCcEEEecCC
Confidence            6999999999996553

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=90.78  E-value=0.19  Score=41.74  Aligned_cols=75  Identities=15%  Similarity=0.134  Sum_probs=44.3

Q ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCC----------CCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 029154           65 NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP----------GLPEDISPDLAFIVQSCWVEDPNLRPSF  134 (198)
Q Consensus        65 ~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~p~~~~~~~~~l~~~~l~~dp~~Rps~  134 (198)
                      .+|+||||+|.++.++.-|...+..................+          .+--.++.....+...|+-..|..||..
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~  188 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLP  188 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccch
Confidence            369999999999999988876664333222111110000000          0011245566778888998889888865


Q ss_pred             HHHHH
Q 029154          135 SQIIR  139 (198)
Q Consensus       135 ~~~l~  139 (198)
                      .++.+
T Consensus       189 ~~~~k  193 (725)
T KOG1093|consen  189 MELSK  193 (725)
T ss_pred             hHHhc
Confidence            55443

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=90.78  E-value=0.18  Score=39.75  Aligned_cols=15  Identities=27%  Similarity=0.366  Sum_probs=13.0

Q ss_pred             CCCCCCCCCeEEcCC
Q 029154            1 MGKFMKEDNLLLTPD   15 (198)
Q Consensus         1 iH~dlKp~NIll~~~   15 (198)
                      +|-||||+|||+-.+
T Consensus       301 ~H~DLKPdNILiFds  315 (434)
T PF05445_consen  301 LHVDLKPDNILIFDS  315 (434)
T ss_pred             eecccCcCcEEEecC
Confidence            699999999999644

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=90.76  E-value=0.21  Score=38.96  Aligned_cols=28  Identities=21%  Similarity=0.358  Sum_probs=24.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      +|+|+.+.||+++.+ +-+-|.||+++..
T Consensus       201 vHGD~~~gNlii~~~-~~~gVlDwe~~~l  228 (321)
T COG3173         201 VHGDYRPGNLIIDPG-RPTGVLDWELATL  228 (321)
T ss_pred             eeCCcccCCEEEeCC-CeeEEEecccccc
Confidence            699999999999976 4488999998864

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=90.71  E-value=0.22  Score=41.54  Aligned_cols=30  Identities=23%  Similarity=0.344  Sum_probs=25.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET   31 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~   31 (198)
                      +|.|..|.||+++.+ +.+.+.|||+.....
T Consensus       287 fHaDpHpGNi~v~~~-g~i~~lDfGi~g~l~  316 (517)
T COG0661         287 FHADPHPGNILVRSD-GRIVLLDFGIVGRLD  316 (517)
T ss_pred             cccCCCccceEEecC-CcEEEEcCcceecCC
Confidence            599999999999977 679999999986443

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=90.50  E-value=0.22  Score=38.47  Aligned_cols=26  Identities=19%  Similarity=0.253  Sum_probs=21.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.||+++.  +.+.|.||+.+.
T Consensus       190 iHgD~~~~Nil~~~--~~i~lIDfd~~~  215 (313)
T TIGR02906       190 CHQDYAYHNILLKD--NEVYVIDFDYCT  215 (313)
T ss_pred             EcCCCCcccEEEeC--CcEEEEECcccc
Confidence            69999999999985  347899998653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=90.12  E-value=0.29  Score=37.27  Aligned_cols=27  Identities=33%  Similarity=0.340  Sum_probs=23.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      .|.|+.|+|+|++.. +.++|+||--|.
T Consensus       156 cH~Dl~~~N~l~t~~-~~l~LIDWEyAg  182 (269)
T COG0510         156 CHNDLNPGNLLLTDK-GGLFLIDWEYAG  182 (269)
T ss_pred             ecCCCCccceEEcCC-CcEEEEecccCC
Confidence            499999999999964 569999997665

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=90.11  E-value=0.23  Score=37.81  Aligned_cols=26  Identities=27%  Similarity=0.318  Sum_probs=22.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLA   27 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla   27 (198)
                      ||+|+.+=||+++.+ +.+.++||-=+
T Consensus       224 VHGDlSefNIlV~~d-g~~~vIDwPQ~  249 (304)
T COG0478         224 VHGDLSEFNILVTED-GDIVVIDWPQA  249 (304)
T ss_pred             cccCCchheEEEecC-CCEEEEeCccc
Confidence            799999999999977 56999999643

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=90.09  E-value=0.2  Score=39.92  Aligned_cols=26  Identities=31%  Similarity=0.534  Sum_probs=23.9

Q ss_pred             CCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            2 GKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         2 H~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      |||+.-.||||+ + |++.|+||-++|.
T Consensus       345 hrnlt~~niLId-~-GnvtLIDfklsRl  370 (488)
T COG5072         345 HRNLTLDNILID-E-GNVTLIDFKLSRL  370 (488)
T ss_pred             cccccccceeee-c-CceEEEEeeeeec
Confidence            999999999999 5 6799999999984

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=89.93  E-value=0.23  Score=40.03  Aligned_cols=26  Identities=15%  Similarity=0.204  Sum_probs=22.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.||++..+  .++++||-++.
T Consensus       226 ~HgDl~~gni~~~~~--~~~viD~E~a~  251 (401)
T PRK09550        226 LHGDLHTGSIFVTEE--ETKVIDPEFAF  251 (401)
T ss_pred             eeccCCcccEEeeCC--CcEEEeccccc
Confidence            699999999999855  48999997664

>PRK06148 hypothetical protein; Provisional

Probab=88.85  E-value=0.34  Score=43.93  Aligned_cols=28  Identities=29%  Similarity=0.433  Sum_probs=22.4

Q ss_pred             CCCCCCCCCeEEcCCC-Cce-EEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQ-KSL-KLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-~~~-kl~DfGla~   28 (198)
                      ||.|+.+.|||++.+. +.+ -|+|||-+.
T Consensus       206 IHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        206 IHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             ECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            7999999999998653 134 499999875

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=88.68  E-value=0.25  Score=37.94  Aligned_cols=28  Identities=32%  Similarity=0.401  Sum_probs=22.5

Q ss_pred             CCCCCCCCCeEEcCCCC----ceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQK----SLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~----~~kl~DfGla~   28 (198)
                      +|+|++..|||+..++.    .+++.||-+++
T Consensus       218 ~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  218 CHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             EcCccCHHhEeEccccccccccceeecccccc
Confidence            59999999999976532    48899998764

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=87.99  E-value=0.32  Score=36.14  Aligned_cols=59  Identities=19%  Similarity=0.103  Sum_probs=38.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+|..|+||+-++. +.+||.|=+.-..           .+..|..-|           ....+.++.+-+|-..++++
T Consensus       165 lHGD~np~NiM~D~~-G~lKlVDP~~Ll~-----------~~V~~vN~~-----------Y~~lT~~aE~~~fv~s~l~~  221 (308)
T PF07387_consen  165 LHGDCNPDNIMCDKF-GYLKLVDPVCLLE-----------NQVNMVNIE-----------YESLTQEAEVKVFVKSCLKL  221 (308)
T ss_pred             ecCCCChhheeecCC-CCEEecChhhhhh-----------heeeEEeee-----------ccccChHHHHHHHHHHHHHH
Confidence            699999999999987 6699999663211           112233312           13346677777776666666


Q ss_pred             Hc
Q 029154           81 LT   82 (198)
Q Consensus        81 ~~   82 (198)
                      +.
T Consensus       222 v~  223 (308)
T PF07387_consen  222 VE  223 (308)
T ss_pred             HH
Confidence            54

The function of this family is unknown.

>PRK12396 5-methylribose kinase; Reviewed

Probab=87.61  E-value=0.52  Score=38.00  Aligned_cols=26  Identities=19%  Similarity=0.203  Sum_probs=22.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+||.|.||+++.+  .+|++|.-++-
T Consensus       230 lHGDlHtGSI~v~~~--~~kvIDpEFAf  255 (409)
T PRK12396        230 IHGDLHTGSVFVKND--STKVIDPEFAF  255 (409)
T ss_pred             ccCcCCCCCEEecCC--ceEEEcccccc
Confidence            799999999999965  48999977653

>PRK06149 hypothetical protein; Provisional

Probab=87.25  E-value=0.5  Score=42.73  Aligned_cols=28  Identities=21%  Similarity=0.216  Sum_probs=22.2

Q ss_pred             CCCCCCCCCeEEcCCC-C---ceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQ-K---SLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-~---~~kl~DfGla~   28 (198)
                      ||.|+.+.|||++.+. +   ..-|+|||-+.
T Consensus       211 IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        211 VHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            7999999999998652 1   23689999764

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=86.87  E-value=0.47  Score=37.77  Aligned_cols=26  Identities=12%  Similarity=0.166  Sum_probs=21.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+||-+.||++..+  .++++|+.++.
T Consensus       195 lHGDl~~gNi~~~~~--~~~~iD~e~~~  220 (370)
T TIGR01767       195 LHGDLHSGSIFVSEH--ETKVIDPEFAF  220 (370)
T ss_pred             eeccCCcccEEEcCC--CCEEEcCcccc
Confidence            699999999999854  38899997664

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=85.78  E-value=0.5  Score=36.62  Aligned_cols=27  Identities=11%  Similarity=0.118  Sum_probs=22.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|+|++.+ +.+.++||-.+.
T Consensus       199 cHgD~~~~Nvl~~~~-~~~~iIDfd~~~  225 (309)
T TIGR02904       199 VHGKLSLSHFLYDET-RGGYFINFEKAS  225 (309)
T ss_pred             eCCCCcHHhEEEcCC-CCEEEEEhhhcc
Confidence            699999999999866 458899997654

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=85.72  E-value=0.46  Score=37.21  Aligned_cols=25  Identities=24%  Similarity=0.251  Sum_probs=21.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+-+.|||++ + + +.|+||+-+.
T Consensus       199 iHgD~h~~NvL~~-d-~-~~iIDFDd~~  223 (325)
T PRK11768        199 LHGDCHPGNILWR-D-G-PHFVDLDDAR  223 (325)
T ss_pred             eecCCCchhcccc-C-C-cEEEeCCCCC
Confidence            7999999999995 4 3 7799999764

>PRK10593 hypothetical protein; Provisional

Probab=83.10  E-value=0.95  Score=35.01  Aligned_cols=25  Identities=16%  Similarity=0.242  Sum_probs=18.9

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEeccc
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFG   25 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfG   25 (198)
                      +|+|+.+.||+++.+ +..+.|.|..
T Consensus       196 lHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        196 VHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             EeCCCCcccEEECCCCCceEEEECch
Confidence            699999999999854 2225677765

>PLN02876 acyl-CoA dehydrogenase

Probab=82.91  E-value=0.85  Score=40.53  Aligned_cols=28  Identities=21%  Similarity=0.464  Sum_probs=22.4

Q ss_pred             CCCCCCCCCeEEcCCC-CceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQ-KSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-~~~kl~DfGla~   28 (198)
                      ||+|+++.|||++.++ ..+-|.||.++.
T Consensus       228 vHGD~~~~Nvl~~~~~~~v~aVLDWE~a~  256 (822)
T PLN02876        228 VHGDFRIDNLVFHPTEDRVIGILDWELST  256 (822)
T ss_pred             EecCcccccEEEcCCCCeEEEEEeeeccc
Confidence            6999999999998532 335689999875

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=82.33  E-value=1.5  Score=36.89  Aligned_cols=31  Identities=23%  Similarity=0.308  Sum_probs=25.4

Q ss_pred             CCCCCCCCCeEEcC---CCCceEEecccCcccCc
Q 029154            1 MGKFMKEDNLLLTP---DQKSLKLADFGLAREET   31 (198)
Q Consensus         1 iH~dlKp~NIll~~---~~~~~kl~DfGla~~~~   31 (198)
                      +|.|-.|.||++..   .+..+.+.|||+.....
T Consensus       323 fHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  323 FHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             ccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            69999999999994   34678999999986543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	198
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-18
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-18
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-17
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		9e-15
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-14
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-14
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		7e-14
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-13
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		6e-13
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		5e-12
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		5e-12
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-11
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-11
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-11
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-11
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-11
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-11
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		4e-11
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-11
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-11
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		5e-11
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-11
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-11
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		5e-11
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-11
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		5e-11
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-11
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-11
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-11
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-11
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-11
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		6e-11
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		7e-11
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-11
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		9e-11
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-10
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-10
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-10
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-10
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-10
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-10
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-10
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-10
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-10
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-10
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-10
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-10
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-10
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-10
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-10
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-10
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-10
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-10
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-10
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-10
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-10
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-10
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-10
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-10
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-10
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-10
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-10
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-10
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-10
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-10
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-10
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-10
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-10
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-10
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-10
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-10
3b2t_A	311	Structure Of Phosphotransferase Length = 311		3e-10
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-10
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-10
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-10
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-10
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		3e-10
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-10
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		4e-10
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-10
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		4e-10
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-10
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-10
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		5e-10
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		5e-10
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-10
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		7e-10
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		7e-10
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		7e-10
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		8e-10
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-10
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-10
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		8e-10
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		8e-10
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		8e-10
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		8e-10
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		8e-10
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		9e-10
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		9e-10
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		9e-10
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-09
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-09
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-09
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-09
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-09
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		1e-09
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-09
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		2e-09
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-09
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-09
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-09
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-09
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		2e-09
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-09
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		2e-09
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-09
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-09
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-09
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-09
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-09
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		3e-09
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		3e-09
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-09
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-09
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		3e-09
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-09
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-09
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-09
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		3e-09
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-09
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-09
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-09
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-09
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		3e-09
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		3e-09
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-09
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		3e-09
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-09
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-09
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-09
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		3e-09
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		3e-09
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-09
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		3e-09
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-09
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-09
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-09
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-09
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-09
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		5e-09
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		5e-09
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-09
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		5e-09
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-09
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-09
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-09
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		6e-09
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-09
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		6e-09
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		6e-09
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-09
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-09
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		6e-09
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-09
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		6e-09
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		6e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-09
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		6e-09
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		6e-09
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-09
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-09
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		6e-09
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		7e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-09
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		7e-09
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		7e-09
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-09
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		7e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-09
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		7e-09
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-09
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		7e-09
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		7e-09
4h58_A	275	Braf In Complex With Compound 3 Length = 275		7e-09
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		7e-09
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-09
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-09
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-09
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		8e-09
3a4o_X	286	Lyn Kinase Domain Length = 286		8e-09
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		9e-09
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-08
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-08
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-08
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-08
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-08
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-08
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-08
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-08
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-08
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-08
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-08
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-08
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-08
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-08
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-08
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-08
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-08
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-08
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		3e-08
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		3e-08
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		4e-08
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		4e-08
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-08
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-08
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-08
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-08
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-08
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-08
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-08
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		4e-08
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-08
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-08
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-08
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		4e-08
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		4e-08
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		4e-08
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-08
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		5e-08
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		5e-08
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		5e-08
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		5e-08
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		5e-08
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		5e-08
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-08
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		5e-08
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-08
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		5e-08
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-08
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		5e-08
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-08
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		5e-08
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		6e-08
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		6e-08
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		6e-08
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		6e-08
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		7e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		1e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-07
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-07
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-07
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-07
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-07
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-07
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-07
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-07
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-07
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-07
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-07
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-07
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-07
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-07
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-07
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-07
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-07
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-07
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-07
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-07
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		3e-07
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-07
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		4e-07
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		4e-07
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		4e-07
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-07
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-07
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		4e-07
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-07
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		4e-07
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		4e-07
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		5e-07
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-07
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		5e-07
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		5e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		5e-07
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-07
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-07
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		6e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-07
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		6e-07
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		7e-07
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-07
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-07
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		9e-07
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		9e-07
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		9e-07
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		9e-07
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		9e-07
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		1e-06
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-06
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-06
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-06
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-06
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-06
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-06
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-06
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-06
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-06
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-06
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-06
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		1e-06
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-06
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		1e-06
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-06
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-06
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-06
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-06
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-06
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		2e-06
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-06
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-06
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-06
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-06
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-06
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-06
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-06
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-06
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-06
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-06
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-06
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-06
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-06
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-06
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-06
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-06
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-06
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		3e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-06
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-06
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		3e-06
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		3e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-06
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		4e-06
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		4e-06
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		4e-06
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		4e-06
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-06
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		4e-06
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		5e-06
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		5e-06
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		5e-06
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		5e-06
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-06
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		5e-06
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-06
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		6e-06
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		6e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		6e-06
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		6e-06
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		6e-06
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		6e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-06
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		6e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		7e-06
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		7e-06
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		7e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		7e-06
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		7e-06
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		7e-06
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		7e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		7e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		7e-06
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		7e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		8e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		8e-06
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		8e-06
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		8e-06
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		8e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		8e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		8e-06
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		8e-06
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		9e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		9e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		9e-06
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		1e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-05
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-05
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		3e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		3e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-05
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		3e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		5e-05
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-05
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-05
4exu_A	371	Mapk13, Inactive Form Length = 371		6e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-05
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		7e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		8e-05
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-05
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		8e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		9e-05
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-04
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-04
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		3e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-04
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-04
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-04
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		4e-04
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-04
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-04
3kk9_A	282	Camkii Substrate Complex B Length = 282		5e-04
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		5e-04
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		5e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		5e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		5e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-04
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-04
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		6e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		6e-04
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		6e-04
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		6e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-04
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		6e-04
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		6e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		7e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		7e-04
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		7e-04
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		7e-04
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		7e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		7e-04
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		7e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		8e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		8e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		8e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		8e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		8e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		8e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		9e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		9e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		9e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		9e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		9e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		9e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		9e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		9e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		9e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		9e-04

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 5   MKEDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKK 62
           +K  NLL+  D+K ++K+ DFGL+R                 WMAPE+     LR    +
Sbjct: 165 LKSPNLLV--DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV-----LRD---E 214
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
             N K DVYSFG++LWEL T + P+  ++  Q   A  FK  R  +P +++P +A I++ 
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 123 CWVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
           CW  +P  RPSF+ I+ +L   + +  PP
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 12/149 (8%)
Query: 5   MKEDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKK 62
           +K  NLL+  D+K ++K+ DFGL+R                 WMAPE+     LR    +
Sbjct: 165 LKSPNLLV--DKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV-----LRD---E 214
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
             N K DVYSFG++LWEL T + P+  ++  Q   A  FK  R  +P +++P +A I++ 
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 123 CWVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
           CW  +P  RPSF+ I+ +L   + +  PP
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 83.6 bits (205), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 16  QKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
            K LK+ DFGLAR              Y WMAPE+       +G         DV+S+G+
Sbjct: 152 NKILKITDFGLAREWHRTTKMSAAGA-YAWMAPEVIRASMFSKGS--------DVWSYGV 202
Query: 76  VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           +LWELLT  +PF G+  L  AY  A       +P       A +++ CW  DP+ RPSF+
Sbjct: 203 LLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFT 262
Query: 136 QIIRMLNAF 144
            I+  L   
Sbjct: 263 NILDQLTTI 271

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 76.6 bits (187), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL      LK+ DFG A                 WMAPE++        E  +Y
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPEVF--------EGSNY 181
Query: 65  NNKVDVYSFGIVLWELLTNRLPFE--GMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           + K DV+S+GI+LWE++T R PF+  G    +  + A     RP L +++   +  ++  
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-AVHNGTRPPLIKNLPKPIESLMTR 240
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW +DP+ RPS  +I++++   +
Sbjct: 241 CWSKDPSQRPSMEEIVKIMTHLM 263

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL      LK+ DFG A                 WMAPE++        E  +Y
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPEVF--------EGSNY 180
Query: 65  NNKVDVYSFGIVLWELLTNRLPFE--GMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           + K DV+S+GI+LWE++T R PF+  G    +  + A     RP L +++   +  ++  
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-AVHNGTRPPLIKNLPKPIESLMTR 239
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW +DP+ RPS  +I++++   +
Sbjct: 240 CWSKDPSQRPSMEEIVKIMTHLM 262

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 20  KLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 79
           K+ADFGL++              ++WMAPE          E++ Y  K D YSF ++L+ 
Sbjct: 169 KVADFGLSQQSVHSVSGLLGN--FQWMAPETIGA------EEESYTEKADTYSFAMILYT 220
Query: 80  LLTNRLPFEGMSNLQAAYAAAFKHA--RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 137
           +LT   PF+  S  +  +    +    RP +PED  P L  +++ CW  DP  RP FS I
Sbjct: 221 ILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 138 IRMLNAF 144
           ++ L+  
Sbjct: 281 VKELSEL 287

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 20  KLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 79
           K+ADFG ++              ++WMAPE          E++ Y  K D YSF ++L+ 
Sbjct: 169 KVADFGTSQQSVHSVSGLLGN--FQWMAPETIGA------EEESYTEKADTYSFAMILYT 220
Query: 80  LLTNRLPFEGMSNLQAAYAAAFKHA--RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 137
           +LT   PF+  S  +  +    +    RP +PED  P L  +++ CW  DP  RP FS I
Sbjct: 221 ILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 138 IRMLNAF 144
           ++ L+  
Sbjct: 281 VKELSEL 287

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 20  KLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 79
           K+ADF L++              ++WMAPE          E++ Y  K D YSF ++L+ 
Sbjct: 169 KVADFSLSQQSVHSVSGLLGN--FQWMAPETIGA------EEESYTEKADTYSFAMILYT 220
Query: 80  LLTNRLPFEGMSNLQAAYAAAFKHA--RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 137
           +LT   PF+  S  +  +    +    RP +PED  P L  +++ CW  DP  RP FS I
Sbjct: 221 ILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 138 IRMLNAF 144
           ++ L+  
Sbjct: 281 VKELSEL 287

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 45  WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 104
           W+APE      L++  +       D++SF ++LWEL+T  +PF  +SN++     A +  
Sbjct: 174 WVAPE-----ALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL 228
Query: 105 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 141
           RP +P  ISP ++ +++ C  EDP  RP F  I+ +L
Sbjct: 229 RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 45  WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 104
           W+APE      L++  +       D +SF ++LWEL+T  +PF  +SN +     A +  
Sbjct: 174 WVAPE-----ALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGL 228
Query: 105 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 141
           RP +P  ISP ++ + + C  EDP  RP F  I+ +L
Sbjct: 229 RPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPIL 265

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  + + +K++DFG+ R              +  +W +PE++S           Y++K D
Sbjct: 135 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKSD 186
Query: 70  VYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
           V+SFG+++WE+ +  ++P+E  SN +     +  F+  +P L    S  +  I+  CW E
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMNHCWKE 243
Query: 127 DPNLRPSFSQIIRMLNAF 144
            P  RP+FS+++R L A 
Sbjct: 244 RPEDRPAFSRLLRQLAAI 261

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  + + +K++DFG+ R              +  +W +PE++S           Y++K D
Sbjct: 135 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKSD 186
Query: 70  VYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
           V+SFG+++WE+ +  ++P+E  SN +     +  F+  +P L    S  +  I+  CW E
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMNHCWKE 243
Query: 127 DPNLRPSFSQIIRML 141
            P  RP+FS+++R L
Sbjct: 244 RPEDRPAFSRLLRQL 258

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKV 68
            L  + + +K++DFG+ R              +  +W +PE++S           Y++K 
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKS 186
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           DV+SFG+++WE+ +  ++P+E  SN +     +  F+  +P L    S  +  I+  CW 
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMNHCWR 243
Query: 126 EDPNLRPSFSQIIRML 141
           E P  RP+FS+++R L
Sbjct: 244 ERPEDRPAFSRLLRQL 259

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  + + +K++DFG+ R              +  +W +PE++S           Y++K D
Sbjct: 133 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKSD 184
Query: 70  VYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
           V+SFG+++WE+ +  ++P+E  SN +     +  F+  +P L    S  +  I+  CW E
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMNHCWKE 241
Query: 127 DPNLRPSFSQIIRML 141
            P  RP+FS+++R L
Sbjct: 242 RPEDRPAFSRLLRQL 256

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKV 68
            L  + + +K++DFG+ R              +  +W +PE++S           Y++K 
Sbjct: 137 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKS 188
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           DV+SFG+++WE+ +  ++P+E  SN +     +  F+  +P L    S  +  I+  CW 
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMNHCWR 245
Query: 126 EDPNLRPSFSQIIRML 141
           E P  RP+FS+++R L
Sbjct: 246 ERPEDRPAFSRLLRQL 261

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  + + +K++DFG+ R              +  +W +PE++S           Y++K D
Sbjct: 155 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKSD 206
Query: 70  VYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
           V+SFG+++WE+ +  ++P+E  SN +     +  F+  +P L    S  +  I+  CW E
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMNHCWKE 263
Query: 127 DPNLRPSFSQIIRML 141
            P  RP+FS+++R L
Sbjct: 264 RPEDRPAFSRLLRQL 278

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 20  KLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL 77
           K+ADFGLAR              +  +W APE  +  +        +  K DV+SFGI+L
Sbjct: 324 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--------FTIKSDVWSFGILL 375
Query: 78  WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ 136
            E++T  R+P+ GMSN +   A    +  P  PE+   +L  I+  CW   P  RP+F  
Sbjct: 376 MEIVTYGRIPYPGMSNPEVIRALERGYRMP-RPENCPEELYNIMMRCWKNRPEERPTFEY 434
Query: 137 IIRMLNAFLFTLRPPSPSVP 156
           I  +L+ F          +P
Sbjct: 435 IQSVLDDFYTATESQXEEIP 454

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI---------- 197
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 254
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 255 WKERPEDRPTFDYLRSVLEDFF 276

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI---------- 199
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 256
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 257 WKERPEDRPTFDYLRSVLEDFF 278

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI---------- 185
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 242
Query: 124 WVEDPNLRPSFSQIIRMLNAF 144
           W E P  RP+F  +  +L  F
Sbjct: 243 WKERPEDRPTFDYLRSVLEDF 263

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI---------- 195
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 252
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 253 WKERPEDRPTFDYLRSVLEDFF 274

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI---------- 194
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 251
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 252 WKERPEDRPTFDYLRSVLEDFF 273

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI---------- 195
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 252
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 253 WKERPEDRPTFDYLRSVLEDFF 274

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI---------- 189
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 246
Query: 124 WVEDPNLRPSFSQIIRMLNAF 144
           W E P  RP+F  +  +L  F
Sbjct: 247 WKERPEDRPTFDYLRSVLEDF 267

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI---------- 184
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 241
Query: 124 WVEDPNLRPSFSQIIRMLNAF 144
           W E P  RP+F  +  +L  F
Sbjct: 242 WKERPEDRPTFDYLRSVLEDF 262

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI---------- 198
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 255
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 256 WKERPEDRPTFDYLRSVLEDFF 277

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 20  KLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K+ADFGLAR              +  +W APE  LY   T+          K DV+SFGI
Sbjct: 145 KIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI----------KSDVWSFGI 194
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           +L EL+T  R+P+ GM+N +        +  P  P+D    L  ++  CW +DP  RP+F
Sbjct: 195 LLTELVTKGRVPYPGMNNREVLEQVERGYRMP-CPQDCPISLHELMIHCWKKDPEERPTF 253
Query: 135 SQIIRMLNAFLFTLRP 150
             +   L  +     P
Sbjct: 254 EYLQSFLEDYFTATEP 269

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI---------- 191
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 248
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 249 WKERPEDRPTFDYLRSVLEDFF 270

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI---------- 189
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 246
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 247 WKERPEDRPTFDYLRSVLEDFF 268

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI---------- 190
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 191 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 247
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 248 WKERPEDRPTFDYLRSVLEDFF 269

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI---------- 189
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 246
Query: 124 WVEDPNLRPSFSQIIRMLNAF 144
           W E P  RP+F  +  +L  F
Sbjct: 247 WKERPEDRPTFDYLRSVLEDF 267

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPEL--YSTVTLRQGEKKHYNN 66
           +L  D  S K+ADFGLAR              +  +W APE   Y T T+          
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI---------- 189
Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSC 123
           K DV+SFGI+L E++T+ R+P+ GM+N +        ++  RP   ++   +L  +++ C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP---DNCPEELYQLMRLC 246
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RP+F  +  +L  F 
Sbjct: 247 WKERPEDRPTFDYLRSVLEDFF 268

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 20  KLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL 77
           K+ADFGLAR              +  +W APE  +  +        +  K DV+SFGI+L
Sbjct: 151 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--------FTIKSDVWSFGILL 202
Query: 78  WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ 136
            E++T  R+P+ GMSN +   A    +  P  PE+   +L  I+  CW   P  RP+F  
Sbjct: 203 MEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEY 261
Query: 137 IIRMLNAF 144
           I  +L+ F
Sbjct: 262 IQSVLDDF 269

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT  + + K+ DFGLAR                  +WMAPE +++ V         Y
Sbjct: 198 NILLTHGRIT-KICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV---------Y 247
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
             + DV+S+GI LWEL +    P+ GM      Y    +  R   PE    ++  I+++C
Sbjct: 248 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 307
Query: 124 WVEDPNLRPSFSQIIRML 141
           W  DP  RP+F QI++++
Sbjct: 308 WDADPLKRPTFKQIVQLI 325

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT  + + K+ DFGLAR                  +WMAPE +++ V         Y
Sbjct: 191 NILLTHGRIT-KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------Y 240
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
             + DV+S+GI LWEL +    P+ GM      Y    +  R   PE    ++  I+++C
Sbjct: 241 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 300
Query: 124 WVEDPNLRPSFSQIIRML 141
           W  DP  RP+F QI++++
Sbjct: 301 WDADPLKRPTFKQIVQLI 318

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT  + + K+ DFGLAR                  +WMAPE +++ V         Y
Sbjct: 175 NILLTHGRIT-KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------Y 224
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
             + DV+S+GI LWEL +    P+ GM      Y    +  R   PE    ++  I+++C
Sbjct: 225 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 284
Query: 124 WVEDPNLRPSFSQIIRML 141
           W  DP  RP+F QI++++
Sbjct: 285 WDADPLKRPTFKQIVQLI 302

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT  + + K+ DFGLAR                  +WMAPE +++ V         Y
Sbjct: 198 NILLTHGRIT-KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------Y 247
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
             + DV+S+GI LWEL +    P+ GM      Y    +  R   PE    ++  I+++C
Sbjct: 248 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 307
Query: 124 WVEDPNLRPSFSQIIRML 141
           W  DP  RP+F QI++++
Sbjct: 308 WDADPLKRPTFKQIVQLI 325

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT  + + K+ DFGLAR                  +WMAPE +++ V         Y
Sbjct: 193 NILLTHGRIT-KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------Y 242
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
             + DV+S+GI LWEL +    P+ GM      Y    +  R   PE    ++  I+++C
Sbjct: 243 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 302
Query: 124 WVEDPNLRPSFSQIIRML 141
           W  DP  RP+F QI++++
Sbjct: 303 WDADPLKRPTFKQIVQLI 320

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 180 NVLVTEDN-VMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRI---------Y 229
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRIV 310

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 172 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 221
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 222 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 280
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 281 WHAVPSQRPTFKQLVEDLDRIV 302

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 180 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 229
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRIV 310

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 173 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 222
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 223 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 281
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 282 WHAVPSQRPTFKQLVEDLDRIV 303

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 221 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 270
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 271 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 329
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 330 WHAVPSQRPTFKQLVEDLDRIV 351

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 169 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 218
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 219 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 277
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 278 WHAVPSQRPTFKQLVEDLDRIV 299

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 180 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 229
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRIV 310

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 165 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 214
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 215 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 273
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 274 WHAVPSQRPTFKQLVEDLDRIV 295

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ +   +K+ DFGLAR                  +WMAPE ++  +         Y
Sbjct: 229 NILLS-ENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKI---------Y 278
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           + K DV+S+G++LWE+ +    P+ G+   +   +   +  R   PE  +P++  I+  C
Sbjct: 279 STKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDC 338
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W  DP  RP F++++  L   L
Sbjct: 339 WHRDPKERPRFAELVEKLGDLL 360

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 20  KLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 79
           K+ADFGLAR               +W APE  +  +        +  K DV+SFGI+L E
Sbjct: 318 KIADFGLARVGAKFPI--------KWTAPEAINFGS--------FTIKSDVWSFGILLME 361
Query: 80  LLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 138
           ++T  R+P+ GMSN +   A    +  P  PE+   +L  I+  CW   P  RP+F  I 
Sbjct: 362 IVTYGRIPYPGMSNPEVIRALERGYRMP-RPENCPEELYNIMMRCWKNRPEERPTFEYIQ 420
Query: 139 RMLNAF 144
            +L+ F
Sbjct: 421 SVLDDF 426

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 152 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE-----S 205
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 206 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 258
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEII 285

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T D   +K+ADFGLAR                  +WMAPE L+  +         Y
Sbjct: 180 NVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------Y 229
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  +
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRIV 310

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 180 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 233
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 234 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 286
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 287 CPDMLFELMRMCWQYNPKMRPSFLEII 313

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 152 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 205
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 206 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 258
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEII 285

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YSTVTLRQGEKKHYNNKV 68
           +L  +    K+ADFGL+R               RWMA E   YS           Y    
Sbjct: 173 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV----------YTTNS 222
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+S+G++LWE+++    P+ GM+  +  Y    +  R   P +   ++  +++ CW E 
Sbjct: 223 DVWSYGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 281
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P  RPSF+QI+  LN  L
Sbjct: 282 PYERPSFAQILVSLNRML 299

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 148 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 201
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 202 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 254
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 255 CPDMLFELMRMCWQYNPKMRPSFLEII 281

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 145 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 196
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 255
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 256 PSRRPRFTELKAQLSTIL 273

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 151 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 204
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 205 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 257
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEII 284

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 149 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 202
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 203 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 255
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 256 CPDMLFELMRMCWQYNPKMRPSFLEII 282

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 151 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 204
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 205 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 257
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEII 284

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YSTVTLRQGEKKHYNNKV 68
           +L  +    K+ADFGL+R               RWMA E   YS           Y    
Sbjct: 170 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV----------YTTNS 219
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+S+G++LWE+++    P+ GM+  +  Y    +  R   P +   ++  +++ CW E 
Sbjct: 220 DVWSYGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 278
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P  RPSF+QI+  LN  L
Sbjct: 279 PYERPSFAQILVSLNRML 296

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 233 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 282
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 283 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 341
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 342 WHAVPSQRPTFKQLVEDLDRIL 363

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE---SINFRR-----FTSAS 193
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 253 PSRRPRFTELKAQLSTIL 270

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 145 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 198
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 199 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 251
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 252 CPDMLFELMRMCWQYNPKMRPSFLEII 278

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 170 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 221
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 280
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 281 PSRRPRFTELKAQLSTIL 298

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL--YSTVTLRQGEKKHYNNKV 68
           +L  +    K+ADFGL+R               RWMA E   YS           Y    
Sbjct: 163 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV----------YTTNS 212
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+S+G++LWE+++    P+ GM+  +  Y    +  R   P +   ++  +++ CW E 
Sbjct: 213 DVWSYGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 271
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P  RPSF+QI+  LN  L
Sbjct: 272 PYERPSFAQILVSLNRML 289

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 147 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 198
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 257
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 258 PSRRPRFTELKAQLSTIL 275

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 144 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 195
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 254
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 255 PSRRPRFTELKAQLSTIL 272

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 573
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 633 PSRRPRFTELKAQLSTIL 650

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 179 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 228
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 229 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 287
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 288 WHAVPSQRPTFKQLVEDLDRIL 309

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 174 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 223
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 224 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 282
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 283 WHAVPSQRPTFKQLVEDLDRIL 304

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 176 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 225
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 226 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 284
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 285 WHAVPSQRPTFKQLVEDLDRIL 306

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 193
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 253 PSRRPRFTELKAQLSTIL 270

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 193
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 253 PSRRPRFTELKAQLSTIL 270

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 190
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 249
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 250 PSRRPRFTELKAQLSTIL 267

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 158 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 211
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 212 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 264
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEII 291

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +K+ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 158 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----S 211
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 212 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 264
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+ F +++ CW  +P +RPSF +II
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEII 291

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 168 TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 219
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +PN+
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPNM 275
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 276 RPTFLEIVNLLKDDL------HPSFPE 296

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 522 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 573
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 633 PSRRPRFTELKAQLSTIL 650

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 169 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 220
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +PN+
Sbjct: 221 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPNM 276
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 277 RPTFLEIVNLLKDDL------HPSFPE 297

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 168 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 219
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +PN+
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPNM 275
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 276 RPTFLEIVNLLKDDL------HPSFPE 296

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L      +KL DFGL+R                 +WMAPE   ++  R+     + +  
Sbjct: 142 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE---SINFRR-----FTSAS 193
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ FG+ +WE+L + + PF+G+ N            R  +P +  P L  ++  CW  D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 128 PNLRPSFSQIIRMLNAFL 145
           P+ RP F+++   L+  L
Sbjct: 253 PSRRPRFTELKAQLSTIL 270

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYN 65
           N L+T ++  LK++DFG++R                  +W APE      L  G    Y+
Sbjct: 243 NCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE-----ALNYGR---YS 293
Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAF-IVQSC 123
           ++ DV+SFGI+LWE  +    P+  +SN Q       K  R   PE + PD  F +++ C
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSN-QQTREFVEKGGRLPCPE-LCPDAVFRLMEQC 351
Query: 124 WVEDPNLRPSFSQIIRMLNAF 144
           W  +P  RPSFS I + L + 
Sbjct: 352 WAYEPGQRPSFSTIYQELQSI 372

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYN 65
           N L+T ++  LK++DFG++R                  +W APE      L  G    Y+
Sbjct: 243 NCLVT-EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE-----ALNYGR---YS 293
Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAF-IVQSC 123
           ++ DV+SFGI+LWE  +    P+  +SN Q       K  R   PE + PD  F +++ C
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSN-QQTREFVEKGGRLPCPE-LCPDAVFRLMEQC 351
Query: 124 WVEDPNLRPSFSQIIRMLNAF 144
           W  +P  RPSFS I + L + 
Sbjct: 352 WAYEPGQRPSFSTIYQELQSI 372

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+L+T +   +++ADFGLAR                  +WMAPE L+  V         Y
Sbjct: 187 NVLVT-ENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------Y 236
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            ++ DV+SFG+++WE+ T    P+ G+  ++  +    +  R   P + + +L  +++ C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDC 295
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W   P+ RP+F Q++  L+  L
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRIL 317

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 136 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 185
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 186 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 244
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 245 KDPEERPTFEYLQAFLEDYFTSTEP 269

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 24/147 (16%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVT 55
           KF+  D    N ++  D  ++K+ DFG+ R                  RWM+PE     +
Sbjct: 143 KFVHRDLAARNCMVAED-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE-----S 196
Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DI 112
           L+ G    Y+   DV+SFG+VLWE+ T    P++G+SN Q            GL +  D 
Sbjct: 197 LKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDN 249
Query: 113 SPDLAF-IVQSCWVEDPNLRPSFSQII 138
            PD+   +++ CW  +P +RPSF +II
Sbjct: 250 CPDMLLELMRMCWQYNPKMRPSFLEII 276

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 194
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 253
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEP 278

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 17/135 (12%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNN 66
           N L+  D   +K++DFG+ R              +  +W APE++            Y++
Sbjct: 134 NCLVDRDL-CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK--------YSS 184
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKH--ARPGLPEDISPDLAFIVQSC 123
           K DV++FGI++WE+ +  ++P++  +N +     +  H   RP L  D    +  I+ SC
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDT---IYQIMYSC 241
Query: 124 WVEDPNLRPSFSQII 138
           W E P  RP+F Q++
Sbjct: 242 WHELPEKRPTFQQLL 256

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 134 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 183
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 184 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 242
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 243 KDPEERPTFEYLQAFLEDYFTSTEP 267

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 443
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  P +    L  ++  CW 
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWR 502
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 503 KEPEERPTFEYLQAFLEDYFTSTEP 527

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT    + K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 194 NVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV---------Y 243
Query: 65  NNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGL-PEDISPDLAFI 119
             + DV+S+GI+LWE+ +  L P+ G+   S         ++ A+P   P++I      I
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS----I 299
Query: 120 VQSCWVEDPNLRPSFSQIIRML 141
           +Q+CW  +P  RP+F QI   L
Sbjct: 300 MQACWALEPTHRPTFQQICSFL 321

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT    + K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 194 NVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV---------Y 243
Query: 65  NNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGL-PEDISPDLAFI 119
             + DV+S+GI+LWE+ +  L P+ G+   S         ++ A+P   P++I      I
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS----I 299
Query: 120 VQSCWVEDPNLRPSFSQIIRML 141
           +Q+CW  +P  RP+F QI   L
Sbjct: 300 MQACWALEPTHRPTFQQICSFL 321

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGL R              +  +W APE  LY   T+          
Sbjct: 312 ILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 361
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 362 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 420
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           +DP  RP+F  +   L  +  +  P
Sbjct: 421 KDPEERPTFEYLQAFLEDYFTSTEP 445

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT    + K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 190 NVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV---------Y 239
Query: 65  NNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGL-PEDISPDLAFI 119
             + DV+S+GI+LWE+ +  L P+ G+   S         ++ A+P   P++I      I
Sbjct: 240 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS----I 295
Query: 120 VQSCWVEDPNLRPSFSQIIRML 141
           +Q+CW  +P  RP+F QI   L
Sbjct: 296 MQACWALEPTHRPTFQQICSFL 317

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT    + K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 182 NVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV---------Y 231
Query: 65  NNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGL-PEDISPDLAFI 119
             + DV+S+GI+LWE+ +  L P+ G+   S         ++ A+P   P++I      I
Sbjct: 232 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS----I 287
Query: 120 VQSCWVEDPNLRPSFSQIIRML 141
           +Q+CW  +P  RP+F QI   L
Sbjct: 288 MQACWALEPTHRPTFQQICSFL 309

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT    + K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 188 NVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV---------Y 237
Query: 65  NNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGL-PEDISPDLAFI 119
             + DV+S+GI+LWE+ +  L P+ G+   S         ++ A+P   P++I      I
Sbjct: 238 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS----I 293
Query: 120 VQSCWVEDPNLRPSFSQIIRML 141
           +Q+CW  +P  RP+F QI   L
Sbjct: 294 MQACWALEPTHRPTFQQICSFL 315

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWM+PE     +L+ G    Y+   DV+SFG
Sbjct: 163 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFG 214
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNL 130
           +VLWE+ T    P++G+SN Q            GL +  D  PD+   +++ CW  +P +
Sbjct: 215 VVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLLDKPDNCPDMLLELMRMCWQYNPKM 270
Query: 131 RPSFSQII 138
           RPSF +II
Sbjct: 271 RPSFLEII 278

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LLT    + K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 196 NVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV---------Y 245
Query: 65  NNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGL-PEDISPDLAFI 119
             + DV+S+GI+LWE+ +  L P+ G+   S         ++ A+P   P++I      I
Sbjct: 246 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS----I 301
Query: 120 VQSCWVEDPNLRPSFSQIIRML 141
           +Q+CW  +P  RP+F QI   L
Sbjct: 302 MQACWALEPTHRPTFQQICSFL 323

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L+T   K +K+ DFGLAR                  +WMAPE     +L +G    Y 
Sbjct: 202 NVLVTHG-KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE-----SLFEG---IYT 252
Query: 66  NKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
            K DV+S+GI+LWE+ +  + P+ G+   +N        FK  +P      + ++  I+Q
Sbjct: 253 IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYA---TEEIYIIMQ 309
Query: 122 SCWVEDPNLRPSFSQIIRMLNAFL 145
           SCW  D   RPSF  +   L   L
Sbjct: 310 SCWAFDSRKRPSFPNLTSFLGCQL 333

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 360
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 419
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 420 KEPEERPTFEYLQAFLEDYFTSTEP 444

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 360
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 419
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 420 KEPEERPTFEYLQAFLEDYFTSTEP 444

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 165 TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 216
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +P +
Sbjct: 217 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPKM 272
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 273 RPTFLEIVNLLKDDL------HPSFPE 293

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 360
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 419
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 420 KEPEERPTFEYLQAFLEDYFTSTEP 444

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 167 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 218
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +P +
Sbjct: 219 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPKM 274
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 275 RPTFLEIVNLLKDDL------HPSFPE 295

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 168 TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 219
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +P +
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPKM 275
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 276 RPTFLEIVNLLKDDL------HPSFPE 296

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 168 TVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 219
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +P +
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPKM 275
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 276 RPTFLEIVNLLKDDL------HPSFPE 296

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 20  KLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGLAR                   RW +PE  +         + + +  DV+S+GI
Sbjct: 187 KVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYGI 238
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           VLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP F
Sbjct: 239 VLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 135 SQIIRMLNAFL 145
            QI+ +L+  +
Sbjct: 298 EQIVSILDKLI 308

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
           ++K+ DFG+ R                  RWMAPE     +L+ G    +    D++SFG
Sbjct: 168 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE-----SLKDGV---FTTSSDMWSFG 219
Query: 75  IVLWELLT-NRLPFEGMSNLQA---AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +VLWE+ +    P++G+SN Q         +       PE ++     +++ CW  +P +
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD----LMRMCWQFNPKM 275
Query: 131 RPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           RP+F +I+ +L   L       PS PE
Sbjct: 276 RPTFLEIVNLLKDDL------HPSFPE 296

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTLRQGEKKHYNNK 67
            L  +   +K+ADFGL+R                  RWM PE  S    R      Y  +
Sbjct: 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE--SIFYNR------YTTE 256
Query: 68  VDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQS 122
            DV+++G+VLWE+ +  L P+ GM++ +  Y     + R G     PE+   +L  +++ 
Sbjct: 257 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY-----YVRDGNILACPENCPLELYNLMRL 311
Query: 123 CWVEDPNLRPSFSQIIRMLN 142
           CW + P  RPSF  I R+L 
Sbjct: 312 CWSKLPADRPSFCSIHRILQ 331

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 191
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 250
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 251 KEPEERPTFEYLQAFLEDYFTSTEP 275

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 135 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI---------- 184
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 185 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 243
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 244 KEPEERPTFEYLQAFLEDYFTSTEP 268

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 24/146 (16%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  DQ  +K++DFGL+R              +  RW  PE  +YS           +++K
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK----------FSSK 186
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCW 124
            D+++FG+++WE+ +  ++P+E  +N + A   A   +  RP L    S  +  I+ SCW
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVYTIMYSCW 243
Query: 125 VEDPNLRPSF----SQIIRMLNAFLF 146
            E  + RP+F    S I+ +++  L+
Sbjct: 244 HEKADERPTFKILLSNILDVMDENLY 269

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXX---XXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 228 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 277
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 278 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 336
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 337 CWHGEPSQRPTFSELVEHLGNLL 359

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 230 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 279
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 280 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 338
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 339 CWHGEPSQRPTFSELVEHLGNLL 361

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 169 NILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---------Y 218
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 178 NILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---------Y 227
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXX---XXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 221 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 270
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 271 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 329
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 330 CWHGEPSQRPTFSELVEHLGNLL 352

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXX---XXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 223 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 272
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 273 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 331
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 332 CWHGEPSQRPTFSELVEHLGNLL 354

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 169 NILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---------Y 218
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  DQ  +K++DFGL+R              +  RW  PE  +YS           +++K
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK----------FSSK 181
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCW 124
            D+++FG+++WE+ +  ++P+E  +N + A   A   +  RP L    S  +  I+ SCW
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVYTIMYSCW 238
Query: 125 VEDPNLRPSFSQII 138
            E  + RP+F  ++
Sbjct: 239 HEKADERPTFKILL 252

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 138 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---------- 187
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 188 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 246
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 247 KEPEERPTFEYLQAFLEDYFTSTEP 271

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  DQ  +K++DFGL+R              +  RW  PE  +YS           +++K
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK----------FSSK 201
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCW 124
            D+++FG+++WE+ +  ++P+E  +N + A   A   +  RP L    S  +  I+ SCW
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVYTIMYSCW 258
Query: 125 VEDPNLRPSFSQII 138
            E  + RP+F  ++
Sbjct: 259 HEKADERPTFKILL 272

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 178 NILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---------Y 227
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 178 NILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---------Y 227
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  DQ  +K++DFGL+R              +  RW  PE  +YS           +++K
Sbjct: 143 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK----------FSSK 192
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCW 124
            D+++FG+++WE+ +  ++P+E  +N + A   A   +  RP L    S  +  I+ SCW
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVYTIMYSCW 249
Query: 125 VEDPNLRPSFSQII 138
            E  + RP+F  ++
Sbjct: 250 HEKADERPTFKILL 263

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  DQ  +K++DFGL+R              +  RW  PE  +YS           +++K
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK----------FSSK 185
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCW 124
            D+++FG+++WE+ +  ++P+E  +N + A   A   +  RP L    S  +  I+ SCW
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVYTIMYSCW 242
Query: 125 VEDPNLRPSFSQII 138
            E  + RP+F  ++
Sbjct: 243 HEKADERPTFKILL 256

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
           +L  +    K+ADFGLAR              +  +W APE  LY   T+          
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI---------- 191
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV+SFGI+L EL T  R+P+ GM N +        +  P  PE     L  ++  CW 
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWR 250
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRP 150
           ++P  RP+F  +   L  +  +  P
Sbjct: 251 KEPEERPTFEYLQAFLEDYFTSTEP 275

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  +   +K+ADFGL+R              +  +W APE   Y+T ++          K
Sbjct: 162 LVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI----------K 211
Query: 68  VDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            DV++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE   P +  ++++CW  
Sbjct: 212 SDVWAFGVLLWEIATYGMSPYPGI-DLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKW 270
Query: 127 DPNLRPSFSQ 136
            P  RPSF++
Sbjct: 271 SPADRPSFAE 280

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  DQ  +K++DFGL+R              +  RW  PE  +YS           +++K
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK----------FSSK 201
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCW 124
            D+++FG+++WE+ +  ++P+E  +N + A   A   +  RP L    S  +  I+ SCW
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVYTIMYSCW 258
Query: 125 VEDPNLRPSFSQII 138
            E  + RP+F  ++
Sbjct: 259 HEKADERPTFKILL 272

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 169 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 218
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 169 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 218
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNNK 67
           L  DQ  +K++DFGL+R              +  RW  PE  +YS           +++K
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK----------FSSK 186
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHARPGLPEDISPDLAFIVQSCW 124
            D+++FG+++WE+ +  ++P+E  +N + A   A   +  RP L    S  +  I+ SCW
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVYTIMYSCW 243
Query: 125 VEDPNLRPSFSQII 138
            E  + RP+F  ++
Sbjct: 244 HEKADERPTFKILL 257

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 178 NILLS-EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV---------Y 227
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXX---XXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 215 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 264
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 265 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 323
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 324 CWHGEPSQRPTFSELVEHLGNLL 346

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXX---XXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 180 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 229
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 230 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 288
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 289 CWHGEPSQRPTFSELVEHLGNLL 311

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXX---XXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 178 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 227
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 174 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 223
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
             + DV+SFG++LWE+ +    P+ G+  +   +    K   R   P+  +P++   +  
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 282
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RP+FS+++  L   L
Sbjct: 283 CWHGEPSQRPTFSELVEHLGNLL 305

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW +PE  +         + + +  DV+S+G
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYG 237
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IVLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP 
Sbjct: 238 IVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK 296
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 297 FEQIVSILDKLI 308

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 20  KLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL+R                   RW +PE  +         + + +  DV+S+GI
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYGI 238
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           VLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP F
Sbjct: 239 VLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 135 SQIIRMLNAFL 145
            QI+ +L+  +
Sbjct: 298 EQIVSILDKLI 308

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW +PE  +         + + +  DV+S+G
Sbjct: 157 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYG 208
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IVLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP 
Sbjct: 209 IVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK 267
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 268 FEQIVSILDKLI 279

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW +PE  +         + + +  DV+S+G
Sbjct: 157 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYG 208
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IVLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP 
Sbjct: 209 IVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK 267
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 268 FEQIVSILDKLI 279

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 20  KLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL+R                   RW +PE  +         + + +  DV+S+GI
Sbjct: 175 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYGI 226
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           VLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP F
Sbjct: 227 VLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 285
Query: 135 SQIIRMLNAFL 145
            QI+ +L+  +
Sbjct: 286 EQIVSILDKLI 296

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 20  KLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL+R                   RW +PE  +         + + +  DV+S+GI
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYGI 238
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           VLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP F
Sbjct: 239 VLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 135 SQIIRMLNAFL 145
            QI+ +L+  +
Sbjct: 298 EQIVSILDKLI 308

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW +PE  +         + + +  DV+S+G
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYG 237
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IVLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP 
Sbjct: 238 IVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK 296
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 297 FEQIVSILDKLI 308

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW +PE  +         + + +  DV+S+G
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYG 237
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IVLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP 
Sbjct: 238 IVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK 296
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 297 FEQIVSILDKLI 308

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW +PE  +         + + +  DV+S+G
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYG 237
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IVLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP 
Sbjct: 238 IVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK 296
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 297 FEQIVSILDKLI 308

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW +PE  +         + + +  DV+S+G
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYG 237
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IVLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP 
Sbjct: 238 IVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK 296
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 297 FEQIVSILDKLI 308

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 20  KLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL+R                   RW +PE  +         + + +  DV+S+GI
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYGI 236
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           VLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP F
Sbjct: 237 VLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 295
Query: 135 SQIIRMLNAFL 145
            QI+ +L+  +
Sbjct: 296 EQIVSILDKLI 306

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 157 LKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 210
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 270
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 271 RLMAECLKKKRDERPLFPQIL 291

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 20  KLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL R                   RW +PE  +         + + +  DV+S+GI
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYGI 238
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           VLWE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N RP F
Sbjct: 239 VLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 135 SQIIRMLNAFL 145
            QI+ +L+  +
Sbjct: 298 EQIVSILDKLI 308

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 158 LKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 211
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 271
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 272 RLMAECLKKKRDERPLFPQIL 292

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 135 LKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 188
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 248
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 249 RLMAECLKKKRDERPLFPQIL 269

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 150 LKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 203
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 263
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 264 RLMAECLKKKRDERPLFPQIL 284

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 143 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 194
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 254 SDRPSFAEI 262

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 132 LKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 185
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 245
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 246 RLMAECLKKKRDERPLFPQIL 266

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 148 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 199
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 259 SDRPSFAEI 267

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 15  DQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVY 71
           D  ++ +ADFGL++                  +W+A E  +         + Y +K DV+
Sbjct: 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA--------DRVYTSKSDVW 233
Query: 72  SFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 130
           +FG+ +WE+ T  + P+ G+ N    Y       R   PED   +L  I+ SCW  DP  
Sbjct: 234 AFGVTMWEIATRGMTPYPGVQN-HEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLD 292
Query: 131 RPSFSQIIRMLNAFLFTL 148
           RP+FS +   L   L +L
Sbjct: 293 RPTFSVLRLQLEKLLESL 310

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKV 68
            L  +   +K+ADFGL+R              +  +W APE  +           ++ K 
Sbjct: 349 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKS 400
Query: 69  DVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 459
Query: 128 PNLRPSFSQI 137
           P+ RPSF++I
Sbjct: 460 PSDRPSFAEI 469

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 135 LKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 188
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 248
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 249 RLMAECLKKKRDERPLFPQIL 269

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 145 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 196
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 256 SDRPSFAEI 264

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 143 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 194
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 254 SDRPSFAEI 262

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 143 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 194
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 254 SDRPSFAEI 262

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 144 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 195
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 254
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 255 SDRPSFAEI 263

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 145 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 196
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 256 SDRPSFAEI 264

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 130 LKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 183
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 244 RLMAECLKKKRDERPLFPQIL 264

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 158 LKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 211
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 271
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 272 RLMAECLKKKRDERPLFPQIL 292

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHY 64
           N+LL+ ++  +K+ DFGLAR                  +WMAPE ++  V         Y
Sbjct: 174 NILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------Y 223
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
             + DV+SFG++LWE+ +    P+ G+   +       +  R   P+  +P++   +  C
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDC 283
Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W  +P+ RP+FS+++  L   L
Sbjct: 284 WHGEPSQRPTFSELVEHLGNLL 305

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 148 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 199
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 259 SDRPSFAEI 267

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPE--LYSTVTLRQGEKKHYNN 66
            L  +   +K+ADFGL+R              +  +W APE   Y+  ++          
Sbjct: 388 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI---------- 437
Query: 67  KVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           K DV++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW 
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 496
Query: 126 EDPNLRPSFSQI 137
            +P+ RPSF++I
Sbjct: 497 WNPSDRPSFAEI 508

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 156 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 207
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 208 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 266
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 267 SDRPSFAEI 275

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 143 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 194
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 254 SDRPSFAEI 262

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 148 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 199
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 259 SDRPSFAEI 267

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 143 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 194
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 254 SDRPSFAEI 262

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 130 LKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 183
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 244 RLMAECLKKKRDERPLFPQIL 264

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K
Sbjct: 130 LKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 183
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPE---DISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N  Q  +     +  P L +   +    + 
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 118 FIVQSCWVEDPNLRPSFSQII 138
            ++  C  +  + RP F QI+
Sbjct: 244 RLMAECLKKKRDERPLFPQIL 264

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 147 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 198
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 199 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 257
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 258 SDRPSFAEI 266

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 148 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 199
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 259 SDRPSFAEI 267

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 148 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 199
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 259 SDRPSFAEI 267

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 143 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 194
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 254 SDRPSFAEI 262

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKV 68
           +L  +    K+ADFGLAR              +  +W APE  +           +  K 
Sbjct: 141 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC--------FTIKS 192
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+SFGI+L+E++T  ++P+ G +N     A +  +  P + E+   +L  I++ CW E 
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRV-ENCPDELYDIMKMCWKEK 251
Query: 128 PNLRPSFSQIIRMLNAF 144
              RP+F  +  +L+ F
Sbjct: 252 AEERPTFDYLQSVLDDF 268

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 144 LVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY--------NKFSIKSD 195
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 254
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 255 SDRPSFAEI 263

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 145 LVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY--------NKFSIKSD 196
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+ +L   Y    K  R   PE     +  ++++CW  +P
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 256 SDRPSFAEI 264

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  + 
Sbjct: 146 LKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDS 199
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
             Y+ + DVY+FGIVL+EL+T +LP+  ++N         + +       +SPDL+ +  
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS-------LSPDLSKVRS 252
Query: 122 SC 123
           +C
Sbjct: 253 NC 254

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  + 
Sbjct: 134 LKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDS 187
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
             Y+ + DVY+FGIVL+EL+T +LP+  ++N         + +       +SPDL+ +  
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS-------LSPDLSKVRS 240
Query: 122 SC 123
           +C
Sbjct: 241 NC 242

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW APE    +  R+     + +  DV+S+G
Sbjct: 163 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE---AIAFRK-----FTSASDVWSYG 214
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IV+WE+++    P+  M+N     A    +  P  P D    L  ++  CW ++ N RP 
Sbjct: 215 IVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPS-PMDCPAALYQLMLDCWQKERNSRPK 273
Query: 134 FSQIIRMLNAFL 145
           F +I+ ML+  +
Sbjct: 274 FDEIVNMLDKLI 285

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 68
           N+L++ D  + K++DFGL +               +W APE      LR+   K ++ K 
Sbjct: 147 NVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAPE-----ALRE---KKFSTKS 195
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+SFGI+LWE+ +  R+P+  +  L+       K  +   P+   P +  ++++CW  D
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD 254
Query: 128 PNLRPSFSQI 137
             +RPSF Q+
Sbjct: 255 AAMRPSFLQL 264

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  + 
Sbjct: 146 LKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDS 199
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
             Y+ + DVY+FGIVL+EL+T +LP+  ++N         + +       +SPDL+ +  
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS-------LSPDLSKVRS 252
Query: 122 SC 123
           +C
Sbjct: 253 NC 254

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 68
           N+L++ D  + K++DFGL +               +W APE      LR+   K ++ K 
Sbjct: 132 NVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAPE-----ALRE---KKFSTKS 180
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+SFGI+LWE+ +  R+P+  +  L+       K  +   P+   P +  ++++CW  D
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD 239
Query: 128 PNLRPSFSQI 137
             +RPSF Q+
Sbjct: 240 AAMRPSFLQL 249

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 20  KLADFGLARXXXXXXXXXXXXXX------YRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           K++DFGL+R                     RW APE          + + + +  DV+S+
Sbjct: 149 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--------QYRKFTSASDVWSY 200
Query: 74  GIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP 132
           GIV+WE+++    P+  M+N Q    A  +  R   P D    L  ++  CW +D N RP
Sbjct: 201 GIVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRP 259
Query: 133 SFSQIIRMLNAFL 145
            F QI+  L+  +
Sbjct: 260 KFGQIVNTLDKMI 272

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 20  KLADFGLARXXXXXXXXXXXXXX------YRWMAPELYSTVTLRQGEKKHYNNKVDVYSF 73
           K++DFGL+R                     RW APE          + + + +  DV+S+
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--------QYRKFTSASDVWSY 226
Query: 74  GIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP 132
           GIV+WE+++    P+  M+N Q    A  +  R   P D    L  ++  CW +D N RP
Sbjct: 227 GIVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRP 285
Query: 133 SFSQIIRMLNAFL 145
            F QI+  L+  +
Sbjct: 286 KFGQIVNTLDKMI 298

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW APE  +  T        +++  DV+SFG
Sbjct: 190 CKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT--------FSSASDVWSFG 241
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           +V+WE+L     P+  M+N     +    +  P  P      L  ++  CW +D   RP 
Sbjct: 242 VVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDCWHKDRAQRPR 300
Query: 134 FSQIIRMLNAFL 145
           FSQI+ +L+A +
Sbjct: 301 FSQIVSVLDALI 312

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW APE  +  T        +++  DV+SFG
Sbjct: 190 CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT--------FSSASDVWSFG 241
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           +V+WE+L     P+  M+N     +    +  P  P      L  ++  CW +D   RP 
Sbjct: 242 VVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDCWHKDRAQRPR 300
Query: 134 FSQIIRMLNAFL 145
           FSQI+ +L+A +
Sbjct: 301 FSQIVSVLDALI 312

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 192
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+   Q  Y    K  R   PE     +  ++++CW  +P
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 252 SDRPSFAEI 260

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 192
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+   Q  Y    K  R   PE     +  ++++CW  +P
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 252 SDRPSFAEI 260

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKVD 69
           L  +   +K+ADFGL+R              +  +W APE  +           ++ K D
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAY--------NKFSIKSD 192
Query: 70  VYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 128
           V++FG++LWE+ T  + P+ G+   Q  Y    K  R   PE     +  ++++CW  +P
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 129 NLRPSFSQI 137
           + RPSF++I
Sbjct: 252 SDRPSFAEI 260

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAPELYSTVTLRQGEKKHYNNKV 68
           +L  +    K+ADFGLAR              +  +W APE  +           +  K 
Sbjct: 140 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC--------FTIKS 191
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           +V+SFGI+L+E++T  ++P+ G +N     A +  +  P + E+   +L  I++ CW E 
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM-ENCPDELYDIMKMCWKEK 250
Query: 128 PNLRPSFSQIIRMLNAF 144
              RP+F  +  +L+ F
Sbjct: 251 AEERPTFDYLQSVLDDF 267

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFG++R                   RW APE  +         + + +  DV+S+G
Sbjct: 170 CKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY--------RKFTSASDVWSYG 221
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IV+WE+++    P+  MSN Q    A  +  R   P D    L  ++  CW ++ + RP 
Sbjct: 222 IVMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPK 280
Query: 134 FSQIIRMLNAFL 145
           F QI+ ML+  +
Sbjct: 281 FGQIVNMLDKLI 292

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMAPELYSTV 54
           +F+  D    NLLL   +  +K+ DFGL R                  + W APE   T 
Sbjct: 141 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 113
           T        +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED  
Sbjct: 200 T--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 251
Query: 114 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 150
            D+  ++  CW   P  RP+F      L  FL   +P
Sbjct: 252 QDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 284

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 3   KFMKEDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGE 60
           K +K +N+L   T     +K+ DFGLA                 +MAPE++         
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF--------- 198
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK------HARPGLPEDISP 114
           K+    K D++S G+V++ LLT  LPF G S  +    A +K        RP     ++P
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-----LTP 253
Query: 115 DLAFIVQSCWVEDPNLRPSFSQIIR 139
               +++    +DP  RPS +Q++ 
Sbjct: 254 QAVDLLKQMLTKDPERRPSAAQVLH 278

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMAPELYSTVTLRQGEK 61
           MK +N+ L  +  ++K+ DFGLA                    WMAPE+     +R  + 
Sbjct: 158 MKSNNIFLH-EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV-----IRMQDN 211
Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLP---EDISPDLA 117
             ++ + DVYS+GIVL+EL+T  LP+  ++N  Q  +     +A P L    ++    + 
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK 271
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
            +V  C  +    RP F QI+  +     +L
Sbjct: 272 RLVADCVKKVKEERPLFPQILSSIELLQHSL 302

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 22/157 (14%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARX----XXXXXXXXXXXXXYRWMAPELYSTV 54
           +F+  D    NLLL   +  +K+ DFGL R                  + W APE   T 
Sbjct: 135 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 113
           T        +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED  
Sbjct: 194 T--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 245
Query: 114 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 150
            D+  ++  CW   P  RP+F      L  FL   +P
Sbjct: 246 QDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 278

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMAPELYSTV 54
           +F+  D    NLLL   +  +K+ DFGL R                  + W APE   T 
Sbjct: 131 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 113
           T        +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED  
Sbjct: 190 T--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 241
Query: 114 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 150
            D+  ++  CW   P  RP+F      L  FL   +P
Sbjct: 242 QDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 274

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 22/157 (14%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMAPELYSTV 54
           +F+  D    NLLL   +  +K+ DFGL R                  + W APE   T 
Sbjct: 141 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 113
           T        +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED  
Sbjct: 200 T--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 251
Query: 114 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 150
            D+  ++  CW   P  RP+F      L  FL   +P
Sbjct: 252 QDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 284

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFG++R                   RW APE  +         + + +  DV+S+G
Sbjct: 155 CKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY--------RKFTSASDVWSYG 206
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IV+WE+++    P+  MSN Q    A  +  R   P D    L  ++  CW ++ + RP 
Sbjct: 207 IVMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPK 265
Query: 134 FSQIIRMLNAFL 145
           F QI+ ML+  +
Sbjct: 266 FGQIVNMLDKLI 277

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFG++R                   RW APE  +         + + +  DV+S+G
Sbjct: 149 CKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY--------RKFTSASDVWSYG 200
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IV+WE+++    P+  MSN Q    A  +  R   P D    L  ++  CW ++ + RP 
Sbjct: 201 IVMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPK 259
Query: 134 FSQIIRMLNAFL 145
           F QI+ ML+  +
Sbjct: 260 FGQIVNMLDKLI 271

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 152 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 210 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 262 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 296

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D + +K+ DFGLA +                ++APE+ S        KK 
Sbjct: 147 LKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS--------KKG 197
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K     +P+ I+P  A ++Q  
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETY-LRIKKNEYSIPKHINPVAASLIQKM 255
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFT 147
              DP  RP+ ++   +LN   FT
Sbjct: 256 LQTDPTARPTINE---LLNDEFFT 276

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 22/157 (14%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMAPELYSTV 54
           +F+  D    NLLL   +  +K+ DFGL R                  + W APE   T 
Sbjct: 131 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 113
           T        +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED  
Sbjct: 190 T--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 241
Query: 114 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 150
            D+  ++  CW   P  RP+F      L  FL   +P
Sbjct: 242 QDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 274

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXX------YRWMAPELYSTVTLRQGEKKHYNNKVDVYS 72
            K++DFGL+R                     RW APE    +  R+     + +  D +S
Sbjct: 157 CKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE---AIAFRK-----FTSASDAWS 208
Query: 73  FGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLR 131
           +GIV+WE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N R
Sbjct: 209 YGIVMWEVMSFGERPYWDMSN-QDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNAR 267
Query: 132 PSFSQIIRMLNAFL 145
           P F Q++  L+  +
Sbjct: 268 PRFPQVVSALDKMI 281

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D + +K+ DFGLA +                ++APE+ S        KK 
Sbjct: 167 LKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--------KKG 217
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K+    +P+ I+P  A ++Q  
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEY-SIPKHINPVAASLIQKM 275
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFT 147
              DP  RP+ ++   +LN   FT
Sbjct: 276 LQTDPTARPTINE---LLNDEFFT 296

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D + +K+ DFGLA +                ++APE+ S        KK 
Sbjct: 143 LKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS--------KKG 193
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K     +P+ I+P  A ++Q  
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETY-LRIKKNEYSIPKHINPVAASLIQKM 251
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFT 147
              DP  RP+ ++   +LN   FT
Sbjct: 252 LQTDPTARPTINE---LLNDEFFT 272

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 19  LKLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG 74
            K++DFGL+R                   RW APE          + + + +  DV+S+G
Sbjct: 184 CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI--------QYRKFTSASDVWSYG 235
Query: 75  IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
           IV+WE+++    P+  MSN     A    +  P  P D    L  ++  CW ++   RP 
Sbjct: 236 IVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPA-PMDCPAGLHQLMLDCWQKERAERPK 294
Query: 134 FSQIIRMLNAFL 145
           F QI+ +L+  +
Sbjct: 295 FEQIVGILDKMI 306

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D + +K+ DFGLA +                ++APE+ S        KK 
Sbjct: 165 LKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--------KKG 215
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K+    +P+ I+P  A ++Q  
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEY-SIPKHINPVAASLIQKM 273
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFT 147
              DP  RP+ ++   +LN   FT
Sbjct: 274 LQTDPTARPTINE---LLNDEFFT 294

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNN 66
           +L  + + +K++DFGL+R                  +WMA E L+  +         Y  
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI---------YTT 231
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+SFG++LWE++T    P+ G+   +        H R   P++ S ++  ++  CW 
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWK 290
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLR 149
           ++P+ RP F+ I + L   +   R
Sbjct: 291 QEPDKRPVFADISKDLEKMMVKRR 314

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 145 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 203 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 254
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 255 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 289

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNN 66
           +L  + + +K++DFGL+R                  +WMA E L+  +         Y  
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI---------YTT 231
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+SFG++LWE++T    P+ G+   +        H R   P++ S ++  ++  CW 
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWK 290
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLR 149
           ++P+ RP F+ I + L   +   R
Sbjct: 291 QEPDKRPVFADISKDLEKMMVKRR 314

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMAPELYSTV 54
           +F+  D    NLLL   +  +K+ DFGL R                  + W APE   T 
Sbjct: 135 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 113
           T        +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED  
Sbjct: 194 T--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 245
Query: 114 PDLAFIVQSCWVEDPNLRPSF 134
            D+  ++  CW   P  RP+F
Sbjct: 246 QDIYNVMVQCWAHKPEDRPTF 266

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D + +K+ DFGLA +                ++APE+ S        KK 
Sbjct: 143 LKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS--------KKG 193
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K     +P+ I+P  A ++Q  
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETY-LRIKKNEYSIPKHINPVAASLIQKM 251
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFT 147
              DP  RP+ ++   +LN   FT
Sbjct: 252 LQTDPTARPTINE---LLNDEFFT 272

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 153 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 211 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 148 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 206 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 257
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNN 66
           +L  + + +K++DFGL+R                  +WMA E L+  +         Y  
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI---------YTT 231
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+SFG++LWE++T    P+ G+   +        H R   P++ S ++  ++  CW 
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWK 290
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLR 149
           ++P+ RP F+ I + L   +   R
Sbjct: 291 QEPDKRPVFADISKDLEKMMVKRR 314

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 212 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 270 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 321
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 150 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 208 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 259
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 260 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 172 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 230 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 281
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 282 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 316

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 3   KFMKED----NLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMAPELYSTV 54
           +F+  D    NLLL   +  +K+ DFGL R                  + W APE   T 
Sbjct: 131 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 113
           T        +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED  
Sbjct: 190 T--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 241
Query: 114 PDLAFIVQSCWVEDPNLRPSF 134
            D+  ++  CW   P  RP+F
Sbjct: 242 QDIYNVMVQCWAHKPEDRPTF 262

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 151 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 209 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 261 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 295

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 153 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 211 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 68
           N+L++ D  + K++DFGL +               +W APE      LR+   K ++ K 
Sbjct: 319 NVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAPE-----ALRE---KKFSTKS 367
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+SFGI+LWE+ +  R+P+  +  L+       K  +   P+   P +  ++++CW  D
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLD 426
Query: 128 PNLRPSFSQIIRML 141
              RP+F Q+   L
Sbjct: 427 AATRPTFLQLREQL 440

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D + +K+ DFGLA +                ++APE+ S        KK 
Sbjct: 141 LKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--------KKG 191
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K     +P+ I+P  A ++Q  
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETY-LRIKKNEYSIPKHINPVAASLIQKM 249
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFT 147
              DP  RP+ ++   +LN   FT
Sbjct: 250 LQTDPTARPTINE---LLNDEFFT 270

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 152 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 210 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 262 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 296

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 18  SLKLADFGLARXXXXXXXXXXXXXXY-----RWMAPELYSTVTLRQGEKKHYNNKVDVYS 72
           ++K+ADFGLAR              +     +W A E  S  T R      +  K DV+S
Sbjct: 162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE--SLQTYR------FTTKSDVWS 213
Query: 73  FGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLR 131
           FG++LWELLT    P+  +      +  A     P  PE     L  ++Q CW  DP +R
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ-PEYCPDSLYQVMQQCWEADPAVR 272
Query: 132 PSFSQII 138
           P+F  ++
Sbjct: 273 PTFRVLV 279

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 171 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 229 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 280
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 281 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 315

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 153 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 211 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXX------YRWMAPELYSTVTLRQGEKKHYNNKVDVYS 72
            K++DFGL+R                     RW APE    +  R+     + +  D +S
Sbjct: 155 CKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE---AIAFRK-----FTSASDAWS 206
Query: 73  FGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLR 131
           +GIV+WE+++    P+  MSN Q    A  +  R   P D    L  ++  CW +D N R
Sbjct: 207 YGIVMWEVMSFGERPYWDMSN-QDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNAR 265
Query: 132 PSFSQIIRMLNAFL 145
           P F Q++  L+  +
Sbjct: 266 PRFPQVVSALDKMI 279

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 151 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 209 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 261 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 295

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 153 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 211 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXX-----XXXXXXXXXXXYRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 158 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 216 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 267
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 268 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 302

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 154 KFVHRDLAARNCML--DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 212 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 264 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 298

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 68
           N+L++ D  + K++DFGL +               +W APE      LR+     ++ K 
Sbjct: 138 NVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAPE-----ALREAA---FSTKS 186
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+SFGI+LWE+ +  R+P+  +  L+       K  +   P+   P +  ++++CW  D
Sbjct: 187 DVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD 245
Query: 128 PNLRPSFSQI 137
             +RPSF Q+
Sbjct: 246 AAMRPSFLQL 255

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   KFMKED----NLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXX-----YRWMAPELYS 52
           KF+  D    N +L  D+K ++K+ADFGLAR                    +WMA E   
Sbjct: 154 KFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
           T        + +  K DV+SFG++LWEL+T   P     N         +  R   PE  
Sbjct: 212 T--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
              L  ++  CW     +RPSFS+++  ++A   T
Sbjct: 264 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 298

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 20  KLADFGLARXXX----XXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL+R                   RW APE  S         + + +  DV+SFGI
Sbjct: 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY--------RKFTSASDVWSFGI 238
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 134
           V+WE++T    P+  +SN +   A       P  P D    +  ++  CW ++   RP F
Sbjct: 239 VMWEVMTYGERPYWELSNHEVMKAINDGFRLP-TPMDCPSAIYQLMMQCWQQERARRPKF 297
Query: 135 SQIIRMLNAFL 145
           + I+ +L+  +
Sbjct: 298 ADIVSILDKLI 308

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFG-LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPEL S +         
Sbjct: 273 IKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-------- 323
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     L+     A K  R  LP        +SP L 
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLK 378
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V DP  R + +++++  + FL    PP+  VP
Sbjct: 379 GFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 415

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL     ++KL DFG++                 +MAPE       RQG    Y
Sbjct: 152 IKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG----Y 206
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP----EDISPDLAFIV 120
           + + DV+S GI L+EL T R P+   +++        K   P L      + SP     V
Sbjct: 207 DVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFV 266
Query: 121 QSCWVEDPNLRPSFSQIIR 139
             C  +D + RP + ++++
Sbjct: 267 NLCLTKDESKRPKYKELLK 285

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPEL S +         
Sbjct: 196 IKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-------- 246
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     L+     A K  R  LP        +SP L 
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLK 301
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V DP  R + +++++  + FL    PP+  VP
Sbjct: 302 GFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 338

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE--LYSTVTLRQGEKKHYN 65
           +L  D+ ++K++D GL R                  RWMAPE  +Y   ++         
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDS------- 211
Query: 66  NKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
              D++S+G+VLWE+ +  L P+ G SN         +   P  P+D    +  ++  CW
Sbjct: 212 ---DIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECW 267
Query: 125 VEDPNLRPSFSQIIRMLNAF 144
            E P+ RP F  I   L A+
Sbjct: 268 NEFPSRRPRFKDIHSRLRAW 287

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPE--LYSTVTLRQGEKKHYN 65
           +L  D+ ++K++D GL R                  RWMAPE  +Y   ++         
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDS------- 228
Query: 66  NKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
              D++S+G+VLWE+ +  L P+ G SN         +   P  P+D    +  ++  CW
Sbjct: 229 ---DIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECW 284
Query: 125 VEDPNLRPSFSQIIRMLNAF 144
            E P+ RP F  I   L A+
Sbjct: 285 NEFPSRRPRFKDIHSRLRAW 304

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D   +K+ DFGLA +                ++APE+          KK 
Sbjct: 168 LKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC--------KKG 218
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VD++S G +L+ LL  + PFE  S L+  Y    K     +P  I+P  + +++  
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETY-IRIKKNEYSVPRHINPVASALIRRM 276
Query: 124 WVEDPNLRPSFSQII 138
              DP LRPS ++++
Sbjct: 277 LHADPTLRPSVAELL 291

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPEL S +         
Sbjct: 153 IKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-------- 203
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     L+     A K  R  LP        +SP L 
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLK 258
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V DP  R + +++++  + FL    PP+  VP
Sbjct: 259 GFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 295

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPEL S +         
Sbjct: 146 IKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-------- 196
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     L+     A K  R  LP        +SP L 
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLK 251
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V DP  R + +++++  + FL    PP+  VP
Sbjct: 252 GFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 288

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPEL S +         
Sbjct: 151 IKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-------- 201
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     L+     A K  R  LP        +SP L 
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLK 256
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V DP  R + +++++  + FL    PP+  VP
Sbjct: 257 GFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 293

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPEL S +         
Sbjct: 142 IKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-------- 192
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     L+     A K  R  LP        +SP L 
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLK 247
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V DP  R + +++++  + FL    PP+  VP
Sbjct: 248 GFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 284

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D   +K+ DFGLA +                ++APE+          KK 
Sbjct: 168 LKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC--------KKG 218
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VD++S G +L+ LL  + PFE  S L+  Y    K     +P  I+P  + +++  
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETY-IRIKKNEYSVPRHINPVASALIRRM 276
Query: 124 WVEDPNLRPSFSQII 138
              DP LRPS ++++
Sbjct: 277 LHADPTLRPSVAELL 291

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 139 LKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KKYD 190
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKKFL 248
Query: 125 VEDPNLRPSFSQIIR 139
           + +P+ R +  QI++
Sbjct: 249 ILNPSKRGTLEQIMK 263

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D   +K+ DFGLA +                ++APE+          KK 
Sbjct: 168 LKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC--------KKG 218
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VD++S G +L+ LL  + PFE  S L+  Y    K     +P  I+P  + +++  
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETY-IRIKKNEYSVPRHINPVASALIRRM 276
Query: 124 WVEDPNLRPSFSQII 138
              DP LRPS ++++
Sbjct: 277 LHADPTLRPSVAELL 291

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 139 LKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KKYD 190
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKKFL 248
Query: 125 VEDPNLRPSFSQIIR 139
           + +P+ R +  QI++
Sbjct: 249 ILNPSKRGTLEQIMK 263

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 139 LKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KKYD 190
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKKFL 248
Query: 125 VEDPNLRPSFSQIIR 139
           + +P+ R +  QI++
Sbjct: 249 ILNPSKRGTLEQIMK 263

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 139 LKAENLLLDADM-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF------QG-KKYD 190
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKKFL 248
Query: 125 VEDPNLRPSFSQIIR 139
           + +P+ R +  QI++
Sbjct: 249 ILNPSKRGTLEQIMK 263

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 139 LKAENLLLDADM-NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF------QG-KKYD 190
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKKFL 248
Query: 125 VEDPNLRPSFSQIIR 139
           + +P+ R +  QI++
Sbjct: 249 ILNPSKRGTLEQIMK 263

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  D   +K+ DFGLA +                ++APE+          KK 
Sbjct: 152 LKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC--------KKG 202
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VD++S G +L+ LL  + PFE  S L+  Y    K     +P  I+P  + +++  
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETY-IRIKKNEYSVPRHINPVASALIRRM 260
Query: 124 WVEDPNLRPSFSQII 138
              DP LRPS ++++
Sbjct: 261 LHADPTLRPSVAELL 275

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 132 LKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF------QG-KKYD 183
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKKFL 241
Query: 125 VEDPNLRPSFSQIIR 139
           + +P+ R +  QI++
Sbjct: 242 ILNPSKRGTLEQIMK 256

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 499 NVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 549
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 608
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 609 WTYDVENRPGFAAVELRLRNYY 630

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 500 NVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 550
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 609
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 610 WTYDVENRPGFAAVELRLRNYY 631

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFG-LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG  A+                WMAPE+ +        +K 
Sbjct: 143 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT--------RKA 193
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 252
Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D   R S  ++I+  + FL   +P S   P
Sbjct: 253 RCLEMDVEKRGSAKELIQ--HQFLKIAKPLSSLTP 285

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 137 LKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELF------QG-KKYD 188
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKRFL 246
Query: 125 VEDPNLRPSFSQII--RMLNA 143
           V +P  R +  QI+  R +NA
Sbjct: 247 VLNPIKRGTLEQIMKDRWINA 267

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFG-LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG  A+                WMAPE+ +        +K 
Sbjct: 143 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT--------RKA 193
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 252
Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D   R S  ++I+  + FL   +P S   P
Sbjct: 253 RCLEMDVEKRGSAKELIQ--HQFLKIAKPLSSLTP 285

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K  N+ LT D  +++L DFG+AR                 +++PE+         E K 
Sbjct: 151 IKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI--------CENKP 201
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG--MSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
           YNNK D+++ G VL+EL T +  FE   M NL     +    + P +    S DL  +V 
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG---SFPPVSLHYSYDLRSLVS 258
Query: 122 SCWVEDPNLRPSFSQII 138
             +  +P  RPS + I+
Sbjct: 259 QLFKRNPRDRPSVNSIL 275

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 140 LKAENLLLDADM-NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF------QG-KKYD 191
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKRFL 249
Query: 125 VEDPNLRPSFSQII--RMLNA 143
           V +P  R +  QI+  R +NA
Sbjct: 250 VLNPIKRGTLEQIMKDRWINA 270

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 10  LLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNN 66
           LL +P Q  +++ADFG+A                   +WMA E     ++  G+   Y +
Sbjct: 147 LLKSPSQ--VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE-----SIHFGK---YTH 196
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P+ G+  L        K  R   P+  + D+  ++  CW+
Sbjct: 197 QSDVWSYGVTVWELMTFGAEPYAGL-RLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWM 255
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRPP 151
            D N+RP+F +   + N F    R P
Sbjct: 256 IDENIRPTFKE---LANEFTRMARDP 278

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 10  LLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNN 66
           LL +P Q  +++ADFG+A                   +WMA E     ++  G+   Y +
Sbjct: 165 LLKSPSQ--VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE-----SIHFGK---YTH 214
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P+ G+  L        K  R   P+  + D+  ++  CW+
Sbjct: 215 QSDVWSYGVTVWELMTFGAEPYAGL-RLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWM 273
Query: 126 EDPNLRPSFSQIIRMLNAFLFTLRPP 151
            D N+RP+F +   + N F    R P
Sbjct: 274 IDENIRPTFKE---LANEFTRMARDP 296

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 135 NVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 185
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 186 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 244
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 245 WTYDVENRPGFAAVELRLRNYY 266

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 155 NVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 205
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 206 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 264
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 265 WTYDVENRPGFAAVELRLRNYY 286

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 147 NVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 197
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 198 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 256
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 257 WTYDVENRPGFAAVELRLRNYY 278

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 141 NVLLVT-QHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK--------F 191
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 250
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 251 WTYDVENRPGFAAVELRLRNYY 272

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K DN+L+      LK++DFG + R               ++MAPE+     + +G +  
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI-----IDKGPRG- 201
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA-YAAAFKHARPGLPEDISPDLAFIVQS 122
           Y    D++S G  + E+ T + PF  +   QAA +        P +PE +S +    +  
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 261
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           C+  DP+ R   + +  +++ FL
Sbjct: 262 CFEPDPDKRACANDL--LVDEFL 282

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 137 NVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 187
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 246
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 247 WTYDVENRPGFAAVELRLRNYY 268

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 141 NVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 191
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 250
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 251 WTYDVENRPGFAAVELRLRNYY 272

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 157 NVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 207
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 266
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 267 WTYDVENRPGFAAVELRLRNYY 288

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL   Q   K++DFGL++                   +W APE  +           +
Sbjct: 157 NVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------F 207
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  ++  C
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLC 266
Query: 124 WVEDPNLRPSFSQI-IRMLNAF 144
           W  D   RP F+ + +R+ N +
Sbjct: 267 WTYDVENRPGFAAVELRLRNYY 288

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 159 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 208
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I++ CW+
Sbjct: 209 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMRKCWM 267
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 268 IDADSRPKFRELI 280

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K DN+L+      LK++DFG + R               ++MAPE+     + +G +  
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI-----IDKGPRG- 187
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA-YAAAFKHARPGLPEDISPDLAFIVQS 122
           Y    D++S G  + E+ T + PF  +   QAA +        P +PE +S +    +  
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 247
Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           C+  DP+ R   + +  +++ FL
Sbjct: 248 CFEPDPDKRACANDL--LVDEFL 268

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 152 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 201
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I++ CW+
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMRKCWM 260
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 261 IDADSRPKFRELI 273

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 149 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 198
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I++ CW+
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMRKCWM 257
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 258 IDADSRPKFRELI 270

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R                  RWM PE   ++  R+     +  + DV+SFG+
Sbjct: 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE---SILYRK-----FTTESDVWSFGV 248
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPS 133
           VLWE+ T  + P+  +SN +A         R    P    P++  I++ CW  +P  R S
Sbjct: 249 VLWEIFTYGKQPWYQLSNTEA--IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHS 306
Query: 134 FSQIIRMLNAF 144
              +   L A 
Sbjct: 307 IKDVHARLQAL 317

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L    + +KL DFGL+R                 +WM+PE   ++  R+     +    
Sbjct: 156 ILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE---SINFRR-----FTTAS 207
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ F + +WE+L+  + PF  + N +       K  R   P+   P L  ++  CW  D
Sbjct: 208 DVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD 266
Query: 128 PNLRPSFSQIIRMLN 142
           P+ RP F++++  L+
Sbjct: 267 PSDRPRFTELVCSLS 281

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R                  RWM PE   ++  R+     +  + DV+SFG+
Sbjct: 168 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE---SILYRK-----FTTESDVWSFGV 219
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPS 133
           VLWE+ T  + P+  +SN +A         R    P    P++  I++ CW  +P  R S
Sbjct: 220 VLWEIFTYGKQPWYQLSNTEA--IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHS 277
Query: 134 FSQIIRMLNAF 144
              +   L A 
Sbjct: 278 IKDVHARLQAL 288

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L    + +KL DFGL+R                 +WM+PE   ++  R+     +    
Sbjct: 144 ILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE---SINFRR-----FTTAS 195
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ F + +WE+L+  + PF  + N +       K  R   P+   P L  ++  CW  D
Sbjct: 196 DVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD 254
Query: 128 PNLRPSFSQIIRMLN 142
           P+ RP F++++  L+
Sbjct: 255 PSDRPRFTELVCSLS 269

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPELYSTVTLRQGEKKHYNNKV 68
           +L    + +KL DFGL+R                 +WM+PE   ++  R+     +    
Sbjct: 140 ILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE---SINFRR-----FTTAS 191
Query: 69  DVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
           DV+ F + +WE+L+  + PF  + N +       K  R   P+   P L  ++  CW  D
Sbjct: 192 DVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD 250
Query: 128 PNLRPSFSQIIRMLN 142
           P+ RP F++++  L+
Sbjct: 251 PSDRPRFTELVCSLS 265

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R                  RWM PE   ++  R+     +  + DV+SFG+
Sbjct: 174 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE---SILYRK-----FTTESDVWSFGV 225
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPS 133
           VLWE+ T  + P+  +SN +A         R    P    P++  I++ CW  +P  R S
Sbjct: 226 VLWEIFTYGKQPWYQLSNTEA--IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHS 283
Query: 134 FSQIIRMLNAF 144
              +   L A 
Sbjct: 284 IKDVHARLQAL 294

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFG-LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG  A+                WMAPE+ +        +K 
Sbjct: 142 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT--------RKA 192
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 251
Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D   R S  ++++  + FL   +P S   P
Sbjct: 252 RCLDMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFG-LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG  A+                WMAPE+ +        +K 
Sbjct: 142 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT--------RKA 192
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 251
Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D   R S  ++++  + FL   +P S   P
Sbjct: 252 RCLEMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFG-LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG  A+                WMAPE+ +        +K 
Sbjct: 142 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVT--------RKA 192
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 251
Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D   R S  ++++  + FL   +P S   P
Sbjct: 252 RCLDMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 139 LKAENLLLDADX-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF------QG-KKYD 190
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P   S D   +++   
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYXSTDCENLLKKFL 248
Query: 125 VEDPNLRPSFSQIIR 139
           + +P+ R +  QI +
Sbjct: 249 ILNPSKRGTLEQIXK 263

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 156 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 205
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 265 IDADSRPKFRELI 277

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 155 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 204
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 205 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 263
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 264 IDADSRPKFRELI 276

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 174 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 223
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 224 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 282
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 283 IDADSRPKFRELI 295

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 156 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 205
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 265 IDADSRPKFRELI 277

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 156 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 205
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 265 IDADSRPKFRELI 277

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 153 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 202
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 203 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 261
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 262 IDADSRPKFRELI 274

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 143 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 192
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 193 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 251
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 252 IDADSRPKFRELI 264

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 152 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 201
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 261 IDADSRPKFRELI 273

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 183 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 232
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 233 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 291
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 292 IDADSRPKFRELI 304

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +Q  +KLADFG+A +                WMAPE+         ++  
Sbjct: 146 IKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI--------QQSA 196
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   M  ++  +    K+  P L  D +      + +C
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLVGDFTKSFKEFIDAC 255
Query: 124 WVEDPNLRPSFSQIIR 139
             +DP+ RP+  ++++
Sbjct: 256 LNKDPSFRPTAKELLK 271

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 149 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 198
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 258 IDADSRPKFRELI 270

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 149 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 198
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 258 IDADSRPKFRELI 270

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 150 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 199
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 200 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 258
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 259 IDADSRPKFRELI 271

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 146 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 195
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 196 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 254
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 255 IDADSRPKFRELI 267

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 151 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 200
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 260 IDADSRPKFRELI 272

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 152 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 201
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 261 IDADSRPKFRELI 273

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 149 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 198
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 258 IDADSRPKFRELI 270

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 152 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 201
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 261 IDADSRPKFRELI 273

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 150 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 199
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 200 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 258
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 259 IDADSRPKFRELI 271

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 151 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 200
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 260 IDADSRPKFRELI 272

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFGLA+                  +WMA        L     + Y +
Sbjct: 149 LVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 198
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 258 IDADSRPKFRELI 270

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  +  ++K+ADFGL+                 + APE+ S        K + 
Sbjct: 139 LKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG-------KLYA 190
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQ 121
             +VDV+S G++L+ +L  RLPF+  S         FK+   G   LP+ +SP  A +++
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKFLSPGAAGLIK 245
Query: 122 SCWVEDPNLRPSFSQIIR 139
              + +P  R S  +I++
Sbjct: 246 RMLIVNPLNRISIHEIMQ 263

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  +  ++K+ADFGL+                 + APE+ S        K + 
Sbjct: 138 LKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG-------KLYA 189
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQ 121
             +VDV+S G++L+ +L  RLPF+  S         FK+   G   LP+ +SP  A +++
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKFLSPGAAGLIK 244
Query: 122 SCWVEDPNLRPSFSQIIR 139
              + +P  R S  +I++
Sbjct: 245 RMLIVNPLNRISIHEIMQ 262

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  +  ++K+ADFGL+                 + APE+ S        K + 
Sbjct: 133 LKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG-------KLYA 184
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQ 121
             +VDV+S G++L+ +L  RLPF+  S         FK+   G   LP+ +SP  A +++
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKFLSPGAAGLIK 239
Query: 122 SCWVEDPNLRPSFSQIIR 139
              + +P  R S  +I++
Sbjct: 240 RMLIVNPLNRISIHEIMQ 257

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  +  ++K+ADFGL+                 + APE+ S        K + 
Sbjct: 129 LKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG-------KLYA 180
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQ 121
             +VDV+S G++L+ +L  RLPF+  S         FK+   G   LP+ +SP  A +++
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKFLSPGAAGLIK 235
Query: 122 SCWVEDPNLRPSFSQIIR 139
              + +P  R S  +I++
Sbjct: 236 RMLIVNPLNRISIHEIMQ 253

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYN 65
           N +L  D  ++ +ADFGL+R                  +W+A E  +           Y 
Sbjct: 167 NCMLAEDM-TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA--------DNLYT 217
Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
              DV++FG+ +WE++T  + P+ G+ N +  Y       R   P +   ++  ++  CW
Sbjct: 218 VHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYNYLIGGNRLKQPPECMEEVYDLMYQCW 276
Query: 125 VEDPNLRPSFSQIIRM 140
             DP  RPSF+  +RM
Sbjct: 277 SADPKQRPSFT-CLRM 291

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 235
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 236 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 136 QIIRML 141
            I+  +
Sbjct: 295 IILERI 300

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+ L  D K +K+ DFGL                 R+M+PE  S+        + Y
Sbjct: 148 LKPSNIFLV-DTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISS--------QDY 198
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQSC 123
             +VD+Y+ G++L ELL        + +     +  F   R G+  DI       ++Q  
Sbjct: 199 GKEVDLYALGLILAELLH-------VCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKL 251
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDT 160
             + P  RP+ S+I+R L     T+   SP   E  T
Sbjct: 252 LSKKPEDRPNTSEILRTL-----TVWKKSPEKNERHT 283

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 190 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 241
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 242 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 300
Query: 136 QIIRML 141
            I+  +
Sbjct: 301 IILERI 306

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 235
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 236 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 136 QIIRML 141
            I+  +
Sbjct: 295 IILERI 300

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 210 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 261
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 262 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 320
Query: 136 QIIRML 141
            I+  +
Sbjct: 321 IILERI 326

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 200 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 251
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 252 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 310
Query: 136 QIIRML 141
            I+  +
Sbjct: 311 IILERI 316

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFG +                 + APEL+      QG KK+ 
Sbjct: 140 LKAENLLLDGDM-NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF------QG-KKYD 191
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+       +  +  +P  +S D   +++   
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIPFYMSTDCENLLKKLL 249
Query: 125 VEDPNLRPSFSQIIR 139
           V +P  R S  QI++
Sbjct: 250 VLNPIKRGSLEQIMK 264

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 249
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 250 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 136 QIIRML 141
            I+  +
Sbjct: 309 IILERI 314

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 234
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 235 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 136 QIIRML 141
            I+  +
Sbjct: 294 IILERI 299

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 234
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 235 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 136 QIIRML 141
            I+  +
Sbjct: 294 IILERI 299

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 201 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 252
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 253 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 311
Query: 136 QIIRML 141
            I+  +
Sbjct: 312 IILERI 317

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 275
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 276 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 334
Query: 136 QIIRML 141
            I+  +
Sbjct: 335 IILERI 340

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-XXXYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  ++  +KL DFGL++                 +MAPE    V  R+G    
Sbjct: 152 LKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE----VVNRRG---- 202
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +    D +SFG++++E+LT  LPF+G    +         A+ G+P+ +SP+   +++  
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMILKAKLGMPQFLSPEAQSLLRML 260
Query: 124 WVEDPNLR 131
           +  +P  R
Sbjct: 261 FKRNPANR 268

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 249
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 250 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 136 QIIRML 141
            I+  +
Sbjct: 309 IILERI 314

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 249
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 250 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 136 QIIRML 141
            I+  +
Sbjct: 309 IILERI 314

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+AR                  +WM PE +         +  + +K D +SFG++
Sbjct: 175 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 226
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 227 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 285
Query: 136 QIIRML 141
            I+  +
Sbjct: 286 IILERI 291

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+ L  D K +K+ DFGL                 R+M+PE  S+        + Y
Sbjct: 162 LKPSNIFLV-DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS--------QDY 212
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQSC 123
             +VD+Y+ G++L ELL        + +     +  F   R G+  DI       ++Q  
Sbjct: 213 GKEVDLYALGLILAELLH-------VCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKL 265
Query: 124 WVEDPNLRPSFSQIIRMLNAF 144
             + P  RP+ S+I+R L  +
Sbjct: 266 LSKKPEDRPNTSEILRTLTVW 286

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFG A+                  +WMA        L     + Y +
Sbjct: 151 LVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 200
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I++ CW+
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMRKCWM 259
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 260 IDADSRPKFRELI 272

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-XXXYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  ++  +KL DFGL++                 +MAPE    V  R+G    
Sbjct: 153 LKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE----VVNRRG---- 203
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +    D +SFG++++E+LT  LPF+G    +         A+ G+P+ +SP+   +++  
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMILKAKLGMPQFLSPEAQSLLRML 261
Query: 124 WVEDP 128
           +  +P
Sbjct: 262 FKRNP 266

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-XXXYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  ++  +KL DFGL++                 +MAPE    V  R+G    
Sbjct: 152 LKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE----VVNRRG---- 202
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +    D +SFG++++E+LT  LPF+G    +         A+ G+P+ +SP+   +++  
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMILKAKLGMPQFLSPEAQSLLRML 260
Query: 124 WVEDP 128
           +  +P
Sbjct: 261 FKRNP 265

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFG A+                  +WMA        L     + Y +
Sbjct: 151 LVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 200
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I++ CW+
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMRKCWM 259
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 260 IDADSRPKFRELI 272

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL  ++  +KL DFG++                 +MAPE    +      K  Y
Sbjct: 151 VKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPE---RIDPPDPTKPDY 206
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI--SPDLAFIVQS 122
           + + DV+S GI L EL T + P++             +   P LP  +  S D    V+ 
Sbjct: 207 DIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKD 266
Query: 123 CWVEDPNLRPSFSQII 138
           C  +D   RP +++++
Sbjct: 267 CLTKDHRKRPKYNKLL 282

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 11/135 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K DN+ +T    S+K+ D GLA                 + APE Y         ++ Y
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP-EFXAPEXY---------EEKY 206
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDIS-PDLAFIVQSC 123
           +  VDVY+FG    E  T+  P+    N    Y       +P   + ++ P++  I++ C
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGC 266
Query: 124 WVEDPNLRPSFSQII 138
             ++ + R S   ++
Sbjct: 267 IRQNKDERYSIKDLL 281

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 23/137 (16%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGE 60
           +K  N+L++    ++K+ DFG+AR                   ++++PE        Q  
Sbjct: 142 VKPANILISA-TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE--------QAR 192
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISP 114
               + + DVYS G VL+E+LT   PF G S +  AY    +H R  P  P    E +S 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSA 248
Query: 115 DLAFIVQSCWVEDPNLR 131
           DL  +V     ++P  R
Sbjct: 249 DLDAVVLKALAKNPENR 265

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 45  WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 104
           W+ PE            K+ N   D +SFG  LWE+ +     + +S L +     F   
Sbjct: 183 WVPPECIEN-------PKNLNLATDKWSFGTTLWEICSG--GDKPLSALDSQRKLQFYED 233
Query: 105 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
           R  LP   + +LA ++ +C   +P+ RPSF  IIR LN+ LFT
Sbjct: 234 RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS-LFT 275

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNK 67
           +L      +K+ DFGLAR                  +WMA        L    ++ + ++
Sbjct: 150 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA--------LESILRRRFTHQ 201
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            DV+S+G+ +WEL+T    P++G+   +       K  R   P   + D+  I+  CW+ 
Sbjct: 202 SDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-KGERLPQPPICTIDVYMIMVKCWMI 260
Query: 127 DPNLRPSFSQII 138
           D   RP F +++
Sbjct: 261 DSECRPRFRELV 272

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 45  WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 104
           W+ PE            K+ N   D +SFG  LWE+ +     + +S L +     F   
Sbjct: 183 WVPPECIEN-------PKNLNLATDKWSFGTTLWEICSG--GDKPLSALDSQRKLQFYED 233
Query: 105 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 147
           R  LP   + +LA ++ +C   +P+ RPSF  IIR LN+ LFT
Sbjct: 234 RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS-LFT 275

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL  ++   K++DFGL++                   +W APE    +  R+     +
Sbjct: 466 NVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE---CINFRK-----F 516
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +++ DV+S+G+ +WE L+  + P++ M   +   A   +  R   P +  P+L  ++  C
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKRMECPPECPPELYALMSDC 575
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTL 148
           W+     RP F  + + + A  ++L
Sbjct: 576 WIYKWEDRPDFLTVEQRMRACYYSL 600

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 234
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 235 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 263

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R                  RWM PE   ++  R+     +  + DV+SFG+
Sbjct: 172 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE---SIMYRK-----FTTESDVWSFGV 223
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAF-IVQSCWVEDPNLRPS 133
           +LWE+ T  + P+  +SN +          R      + P   + ++  CW  +P  R +
Sbjct: 224 ILWEIFTYGKQPWFQLSNTEV--IECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLN 281
Query: 134 FSQIIRMLNAF 144
             +I ++L+A 
Sbjct: 282 IKEIYKILHAL 292

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 186 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 238
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 239 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 267

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 184 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 236
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 237 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 265

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 227 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 279
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 280 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 308

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 234
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 235 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 263

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL  D  ++K+ADFGL+                 + APE+ +        K + 
Sbjct: 134 LKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING-------KLYA 185
Query: 65  NNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPG---LPEDISPDLAFI 119
             +VDV+S GIVL+ +L  RLPF  E + NL       FK        +P+ +SP    +
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------FKKVNSCVYVMPDFLSPGAQSL 238
Query: 120 VQSCWVEDPNLRPSFSQIIR 139
           ++   V DP  R +  +I R
Sbjct: 239 IRRMIVADPMQRITIQEIRR 258

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 176 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 228
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 229 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 257

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWMAPELYSTVTLRQGEKKHY 64
           N+LL  ++   K++DFGL++                   +W APE    +  R+     +
Sbjct: 140 NVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE---CINFRK-----F 190
Query: 65  NNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +++ DV+S+G+ +WE L+  + P++ M   +   A   +  R   P +  P+L  ++  C
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKRMECPPECPPELYALMSDC 249
Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTL 148
           W+     RP F  + + + A  ++L
Sbjct: 250 WIYKWEDRPDFLTVEQRMRACYYSL 274

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFG A+                  +WMA        L     + Y +
Sbjct: 156 LVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 205
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 265 IDADSRPKFRELI 277

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 18/117 (15%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX--XYRWMAPELYSTVTLRQGEKK 62
           +K  N+L+  + K+LK+ DFG+A+                 ++ +PE        Q + +
Sbjct: 137 IKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE--------QAKGE 187
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE---DISPDL 116
             +   D+YS GIVL+E+L    PF G    + A + A KH +  +P    D+  D+
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNG----ETAVSIAIKHIQDSVPNVTTDVRKDI 240

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-XXXYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  ++  +KL DFGL++                 +MAPE    V  RQG    
Sbjct: 156 LKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE----VVNRQG---- 206
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           +++  D +S+G++++E+LT  LPF+G    +         A+ G+P+ +S +   ++++ 
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLPFQGKDRKET--MTLILKAKLGMPQFLSTEAQSLLRAL 264
Query: 124 WVEDPNLR 131
           +  +P  R
Sbjct: 265 FKRNPANR 272

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFG A+                  +WMA        L     + Y +
Sbjct: 149 LVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 198
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 258 IDADSRPKFRELI 270

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFG A+                  +WMA        L     + Y +
Sbjct: 151 LVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 200
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 260 IDADSRPKFRELI 272

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 10  LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNN 66
           L+ TP  + +K+ DFG A+                  +WMA        L     + Y +
Sbjct: 153 LVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA--------LESILHRIYTH 202
Query: 67  KVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
           + DV+S+G+ +WEL+T    P++G+   + + +   K  R   P   + D+  I+  CW+
Sbjct: 203 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 261
Query: 126 EDPNLRPSFSQII 138
            D + RP F ++I
Sbjct: 262 IDADSRPKFRELI 274

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 153 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 205
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 206 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 234

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 212
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 213 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 241

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 229

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX--XXXYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   + L DFGL++                  +MAP++     +R G+  
Sbjct: 185 IKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAPDI-----VRGGDSG 238
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           H +  VD +S G++++ELLT   PF  +G  N QA  +     + P  P+++S     ++
Sbjct: 239 H-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLI 297
Query: 121 QSCWVEDPNLR 131
           Q   ++DP  R
Sbjct: 298 QRLLMKDPKKR 308

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 212
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 213 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 241

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 156 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 208
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 209 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 237

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGE 60
           +K  N++++    ++K+ DFG+AR                   ++++PE        Q  
Sbjct: 142 VKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QAR 192
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISP 114
               + + DVYS G VL+E+LT   PF G S +  AY    +H R  P  P    E +S 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSA 248
Query: 115 DLAFIVQSCWVEDPNLR 131
           DL  +V     ++P  R
Sbjct: 249 DLDAVVLKALAKNPENR 265

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 167 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 219
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 220 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 248

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 20  KLADFGLARXXXXXX---XXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K+ DFG+A+                  +WM PE +         +  + +K D +SFG++
Sbjct: 184 KIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFM--------EGIFTSKTDTWSFGVL 235
Query: 77  LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
           LWE+ +   +P+   SN Q          R   P++    +  I+  CW   P  RP+F+
Sbjct: 236 LWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 136 QIIRML 141
            I+  +
Sbjct: 295 IILERI 300

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTLRQGEKKHYNNK 67
           +L      +K+ DFGLAR                  +WMA E            + + ++
Sbjct: 171 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY--------RKFTHQ 222
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            DV+S+G+ +WEL+T    P++G+   +       K  R   P   + D+  ++  CW+ 
Sbjct: 223 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGERLPQPPICTIDVYMVMVKCWMI 281
Query: 127 DPNLRPSFSQI 137
           D + RP F ++
Sbjct: 282 DADSRPKFKEL 292

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 229

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGE 60
           +K  N++++    ++K+ DFG+AR                   ++++PE        Q  
Sbjct: 142 VKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QAR 192
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISP 114
               + + DVYS G VL+E+LT   PF G S +  AY    +H R  P  P    E +S 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSA 248
Query: 115 DLAFIVQSCWVEDPNLR 131
           DL  +V     ++P  R
Sbjct: 249 DLDAVVLKALAKNPENR 265

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 152 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 204
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 205 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 233

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGE 60
           +K  N++++    ++K+ DFG+AR                   ++++PE        Q  
Sbjct: 142 VKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QAR 192
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISP 114
               + + DVYS G VL+E+LT   PF G S +  AY    +H R  P  P    E +S 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSA 248
Query: 115 DLAFIVQSCWVEDPNLR 131
           DL  +V     ++P  R
Sbjct: 249 DLDAVVLKALAKNPENR 265

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 161 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 213
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 214 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 242

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 229

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPE+ S +         
Sbjct: 167 IKSDSILLTSDGR-IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP-------- 217
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+     LQ     A +  R  LP        +S  L 
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-----AMRRIRDSLPPRVKDLHKVSSVLR 272
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             +    V +P+ R +  +++   + FL    PPS  VP
Sbjct: 273 GFLDLMLVREPSQRATAQELLG--HPFLKLAGPPSCIVP 309

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 11  LLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWMAPELYSTVTLRQGEKKHYNNK 67
           +L      +K+ DFGLAR                  +WMA E            + + ++
Sbjct: 148 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY--------RKFTHQ 199
Query: 68  VDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVE 126
            DV+S+G+ +WEL+T    P++G+   +       K  R   P   + D+  ++  CW+ 
Sbjct: 200 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGERLPQPPICTIDVYMVMVKCWMI 258
Query: 127 DPNLRPSFSQI 137
           D + RP F ++
Sbjct: 259 DADSRPKFKEL 269

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 229

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 229

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 229

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 149 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT-------DY 201
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 202 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 230

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A+                + APEL    T        Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-------DY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
            + +DV+S G VL ELL  +  F G S +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV 229

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGE 60
           +K  N++++    ++K+ DFG+AR                   ++++PE        Q  
Sbjct: 159 VKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QAR 209
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISP 114
               + + DVYS G VL+E+LT   PF G S +  AY    +H R  P  P    E +S 
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSA 265
Query: 115 DLAFIVQSCWVEDPNLR 131
           DL  +V     ++P  R
Sbjct: 266 DLDAVVLKALAKNPENR 282

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 16  QKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           Q   KL DFG AR                ++ P++Y    LR+  +K Y   VD++S G+
Sbjct: 152 QSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
Query: 76  VLWELLTNRLPF 87
             +   T  LPF
Sbjct: 212 TFYHAATGSLPF 223

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 16  QKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           Q   KL DFG AR                ++ P++Y    LR+  +K Y   VD++S G+
Sbjct: 152 QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
Query: 76  VLWELLTNRLPF 87
             +   T  LPF
Sbjct: 212 TFYHAATGSLPF 223

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNAM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +   +KLADFG+A +                WMAPE+         ++  
Sbjct: 150 IKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI--------KQSA 200
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   +  ++  +    K+  P L  + S  L   V++C
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEAC 259
Query: 124 WVEDPNLRPSFSQIIR 139
             ++P+ RP+  ++++
Sbjct: 260 LNKEPSFRPTAKELLK 275

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +   +KLADFG+A +                WMAPE+         ++  
Sbjct: 130 IKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI--------KQSA 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   +  ++  +    K+  P L  + S  L   V++C
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEAC 239
Query: 124 WVEDPNLRPSFSQIIR 139
             ++P+ RP+  ++++
Sbjct: 240 LNKEPSFRPTAKELLK 255

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 5   MKEDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL    K  ++KLADFGLA                 +++PE+         +K 
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL--------KKD 205
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKHARPGLPEDISPDLAFI 119
            Y+  VD+++ G++L+ LL    PF  E    L A   A A+ +  P   + ++P+   +
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW-DTVTPEAKSL 264
Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARAR 179
           + S    +P  R +  Q +++   ++      + ++   DT +        + +F+AR +
Sbjct: 265 IDSMLTVNPKKRITADQALKV--PWICNRERVASAIHRQDTVD-------CLKKFNARRK 315
Query: 180 GKFAFLRQLFTAKRTKNL 197
            K A L  +   +   NL
Sbjct: 316 LKGAILTTMIATRNLSNL 333

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 153 LKPSNLAVNEDSE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 202
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 231

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 157 LKPSNLAVNEDSE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 206
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 235

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 162 LKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 211
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 212 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 240

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +   +KLADFG+A +                WMAPE+         ++  
Sbjct: 145 IKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI--------KQSA 195
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   +  ++  +    K+  P L  + S  L   V++C
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEAC 254
Query: 124 WVEDPNLRPSFSQIIR 139
             ++P+ RP+  ++++
Sbjct: 255 LNKEPSFRPTAKELLK 270

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 156 LKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 205
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 234

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 156 LKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 205
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 234

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFG-LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K D++LLT D + +KL+DFG  A+                WMAPE+ S        +  
Sbjct: 167 IKSDSILLTLDGR-VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS--------RSL 217
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLA 117
           Y  +VD++S GI++ E++    P+   S +Q     A K  R   P        +SP L 
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-----AMKRLRDSPPPKLKNSHKVSPVLR 272
Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
             ++   V DP  R +  +++   + FL     P   VP
Sbjct: 273 DFLERMLVRDPQERATAQELLD--HPFLLQTGLPECLVP 309

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 158 LKPSNLAVNEDCE-LKILDFGLARHTADEMTGYVATRWYR--APEIMLNWM-------HY 207
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 236

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDXE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +   +KLADFG+A +                WMAPE+         ++  
Sbjct: 130 IKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI--------KQSA 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   +  ++  +    K+  P L  + S  L   V++C
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEAC 239
Query: 124 WVEDPNLRPSFSQIIR 139
             ++P+ RP+  ++++
Sbjct: 240 LNKEPSFRPTAKELLK 255

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 158 LKPSNLAVNEDCE-LKILDFGLARHTADEMTGYVATRWYR--APEIMLNWM-------HY 207
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 236

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 158 LKPSNLAVNEDCE-LKILDFGLARHTADEMTGYVATRWYR--APEIMLNWM-------HY 207
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 236

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 163 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 212
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 241

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 171 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 220
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 249

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 163 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 212
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 241

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 163 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 212
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 241

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 170 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 219
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 220 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 248

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 153 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 202
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 231

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 147 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 196
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 225

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 170 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 219
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 220 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 248

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 148 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 197
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 198 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 226

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGXVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 161 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 210
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 211 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 239

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL+ +Q  +KLADFG+A +                WMAPE+         ++  
Sbjct: 142 IKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI--------KQSA 192
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y+ K D++S GI   EL     P   +  ++  +    K++ P L    S      V++C
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQHSKPFKEFVEAC 251
Query: 124 WVEDPNLRPSFSQIIR 139
             +DP  RP+  ++++
Sbjct: 252 LNKDPRFRPTAKELLK 267

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 171 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 220
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 249

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 153 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 202
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 231

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 157 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 206
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 235

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 149 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 198
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 199 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 227

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 147 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 196
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 225

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 23/137 (16%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGE 60
           +K  N++++    ++K+ DFG+AR                   ++++PE        Q  
Sbjct: 142 VKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QAR 192
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISP 114
               + + DVYS G VL+E+LT   PF G S    AY    +H R  P  P    E +S 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAY----QHVREDPIPPSARHEGLSA 248
Query: 115 DLAFIVQSCWVEDPNLR 131
           DL  +V     ++P  R
Sbjct: 249 DLDAVVLKALAKNPENR 265

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 156 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 205
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 234

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 162 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 211
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 212 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 240

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 150 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 199
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 200 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 228

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 174 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 223
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 224 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 252

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 153 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 202
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 231

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 147 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 196
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 225

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 7   EDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNN 66
           E+ LL       LK+ DFG ++                ++APE    V LRQ     Y+ 
Sbjct: 145 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE----VLLRQ----EYDG 196
Query: 67  KV-DVYSFGIVLWELLTNRLPFEG-------MSNLQAAYAAAFKHARPGLPED--ISPDL 116
           K+ DV+S G+ L+ +L    PFE           +Q   +  +      +P+D  ISP+ 
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-----SIPDDIRISPEC 251
Query: 117 AFIVQSCWVEDPNLRPSFSQI 137
             ++   +V DP  R S  +I
Sbjct: 252 CHLISRIFVADPATRISIPEI 272

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 171 LKPSNLAVNEDCE-LKILDFGLARHTDDEMXGXVATRWYR--APEIMLNWM-------HY 220
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 249

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 158 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 207
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 236

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 157 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 206
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 235

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 157 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 206
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 235

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 156 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 205
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 234

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 148 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 197
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 198 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 226

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMAGFVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFGLARHTDDEMAGFVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 147 LKPSNLAVNEDCE-LKILDFGLARHTDDEMAGFVATRWYR--APEIMLNWM-------HY 196
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 225

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 174 LKPSNLAVNEDCE-LKILDFGLARHTDDEMXGYVATRWYR--APEIMLNWM-------HY 223
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 224 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 252

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+            HY
Sbjct: 180 LKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 229
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 230 NMTVDIWSVGCIMAELLTGRTLFPGTDHI 258

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGL R              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDSE-LKILDFGLCRHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D   +K+ADFG+ +                 ++APE+        G+K  
Sbjct: 145 LKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL------GQK-- 195
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN+ VD +SFG++L+E+L  + PF G    +  ++   +   P  P  +  +   ++   
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKL 253
Query: 124 WVEDPNLRPSFSQIIR 139
           +V +P  R      IR
Sbjct: 254 FVREPEKRLGVRGDIR 269

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D   +K+ADFG+ +                 ++APE+        G+K  
Sbjct: 144 LKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL------GQK-- 194
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN+ VD +SFG++L+E+L  + PF G    +  ++   +   P  P  +  +   ++   
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKL 252
Query: 124 WVEDPNLRPSFSQIIR 139
           +V +P  R      IR
Sbjct: 253 FVREPEKRLGVRGDIR 268

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+  +         HY
Sbjct: 170 LKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVTRWYR--APEVILSWM-------HY 219
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ E+LT +  F+G   L
Sbjct: 220 NQTVDIWSVGCIMAEMLTGKTLFKGKDYL 248

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ D+GLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDYGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DFGLAR              YR  APE+  +         HY
Sbjct: 152 LKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVTRWYR--APEVILSWM-------HY 201
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ E+LT +  F+G   L
Sbjct: 202 NQTVDIWSVGCIMAEMLTGKTLFKGKDYL 230

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 61/161 (37%), Gaps = 42/161 (26%)
Query: 12  LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR---------------WMAPELYSTVTL 56
           L  + K++ +ADFGLAR               +               WMAPE+ +    
Sbjct: 140 LVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING--- 196
Query: 57  RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY---AAAFKHARPGL----- 108
                + Y+ KVDV+SFGIVL E++       G  N    Y      F     G      
Sbjct: 197 -----RSYDEKVDVFSFGIVLCEII-------GRVNADPDYLPRTMDFGLNVRGFLDRYC 244
Query: 109 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR 149
           P +  P    I   C   DP  RPSF +    L  +L TLR
Sbjct: 245 PPNCPPSFFPITVRCCDLDPEKRPSFVK----LEHWLETLR 281

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K +NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 132 LKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 183
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K +NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 130 LKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K +NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 131 LKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 182
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K +NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 130 LKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 5   MKEDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL   +K   +K+ DFGL+                 ++APE+          +K
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL---------RK 212
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN 92
            Y+ K DV+S G++L+ LL    PF G ++
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTD 242

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K +NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLL+  D  +LKLADFGLAR                W     Y    +  G KK Y
Sbjct: 145 LKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKK-Y 197
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSN 92
           +  VD++S G +  E++T +  F G+++
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTD 225

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLL+  D  +LKLADFGLAR                W     Y    +  G KK Y
Sbjct: 145 LKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKK-Y 197
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSN 92
           +  VD++S G +  E++T +  F G+++
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTD 225

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 136 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 187
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 130 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 133 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 184
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 128 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 179
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 128 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 179
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 132 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 183
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 132 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 183
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 128 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 179
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 128 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 179
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 131 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 182
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 133 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 184
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 132 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 183
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 132 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 183
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 131 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 182
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 131 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 182
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 132 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 183
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 130 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 128 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 179
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 130 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 128 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 179
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 136 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-------XKY 187
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC-------KY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-APELYSTVTLRQGEKKH 63
           +K  NLL+   + ++KLADFGLAR                W  APE+           K+
Sbjct: 129 LKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-------XKY 180
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
           Y+  VD++S G +  E++T R  F G S +   +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 7   EDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNN 66
           E+ LL       LK+ADFG ++                ++APE+          KK Y+ 
Sbjct: 144 ENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL--------KKEYDG 195
Query: 67  KV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGLPE--DISPDLAFIVQ 121
           KV DV+S G+ L+ +L    PFE     +       +  + +  +P+   ISP+   ++ 
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 122 SCWVEDPNLRPSFSQI 137
             +V DP  R S  +I
Sbjct: 256 RIFVADPAKRISIPEI 271

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           +K+ DFG++R                  RWM PE   ++  R+     +  + DV+S G+
Sbjct: 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE---SIMYRK-----FTTESDVWSLGV 218
Query: 76  VLWELLT-NRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPS 133
           VLWE+ T  + P+  +SN +          R    P     ++  ++  CW  +P++R +
Sbjct: 219 VLWEIFTYGKQPWYQLSNNEV--IECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKN 276
Query: 134 FSQIIRMLNAFLFTLRPPSP 153
               I+ ++  L  L   SP
Sbjct: 277 ----IKGIHTLLQNLAKASP 292

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+  FGLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILGFGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 5   MKEDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL    +   +K+ DFGL+                 ++APE+          +K
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL---------RK 197
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN 92
            Y+ K DV+S G++L+ LL    PF G ++
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQTD 227

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL P    LKL DFG A+                + APEL    T       +Y
Sbjct: 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGAT-------NY 219
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
              +D++S G V+ EL+  +  F G S +
Sbjct: 220 TTNIDIWSTGCVMAELMQGQPLFPGESGI 248

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 5   MKEDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL   +K   +K+ DFGL+                 ++APE+          + 
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---------RG 197
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIV 120
            Y+ K DV+S G++L+ LL+   PF G +                LP+   IS D   ++
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATS 167
           +      P+LR + +Q +   + ++      +P++ +  + E+A T+
Sbjct: 258 RKMLTFHPSLRITATQCLE--HPWIQKYSSETPTISDLPSLESAMTN 302

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ D GLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDAGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ D GLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDGGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  +   +K+ DFG A+              Y  +APE+ ST        K Y
Sbjct: 132 LKPENILLDKN-GHIKITDFGFAKYVPDVTYXLCGTPDY--IAPEVVST--------KPY 180
Query: 65  NNKVDVYSFGIVLWELLTNRLPF 87
           N  +D +SFGI+++E+L    PF
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPF 203

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ D GLAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDRGLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 134 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL--------EDND 184
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++   
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGL 242
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 243 LKKDPKQR 250

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 5   MKEDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL    +   +K+ DFGL+                 ++APE+          +K
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL---------RK 180
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN 92
            Y+ K DV+S G++L+ LL    PF G ++
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTD 210

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 131 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL--------EDND 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++   
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGL 239
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 240 LKKDPKQR 247

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 131 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL--------EDND 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++   
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGL 239
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 240 LKKDPKQR 247

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D + LK+ DF LAR              YR  APE+            HY
Sbjct: 151 LKPSNLAVNEDCE-LKILDFYLARHTDDEMTGYVATRWYR--APEIMLNWM-------HY 200
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL 93
           N  VD++S G ++ ELLT R  F G  ++
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHI 229

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 5   MKEDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL    K  ++KLADFGLA                 +++PE+         +K 
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL--------KKD 182
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKHARPGLPEDISPDLAFI 119
            Y+  VD+++ G++L+ LL    PF  E    L A   A A+ +  P   + ++P+   +
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW-DTVTPEAKSL 241
Query: 120 VQSCWVEDPNLRPSFSQIIRM 140
           + S    +P  R +  Q +++
Sbjct: 242 IDSMLTVNPKKRITADQALKV 262

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 7   EDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNN 66
           E+ LL       LK+ DFG ++                ++APE+          KK Y+ 
Sbjct: 144 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--------KKEYDG 195
Query: 67  KV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGLPE--DISPDLAFIVQ 121
           KV DV+S G+ L+ +L    PFE     +       +  + +  +P+   ISP+   ++ 
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 122 SCWVEDPNLRPSFSQI 137
             +V DP  R S  +I
Sbjct: 256 RIFVADPAKRISIPEI 271

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 5   MKEDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL    K  ++KLADFGLA                 +++PE+         +K 
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL--------KKD 182
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKHARPGLPEDISPDLAFI 119
            Y+  VD+++ G++L+ LL    PF  E    L A   A A+ +  P   + ++P+   +
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW-DTVTPEAKSL 241
Query: 120 VQSCWVEDPNLRPSFSQIIRM 140
           + S    +P  R +  Q +++
Sbjct: 242 IDSMLTVNPKKRITADQALKV 262

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 131 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL--------EDND 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++   
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGL 239
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 240 LKKDPKQR 247

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 5   MKEDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL    K  ++KLADFGLA                 +++PE+         +K 
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL--------KKD 181
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKHARPGLPEDISPDLAFI 119
            Y+  VD+++ G++L+ LL    PF  E    L A   A A+ +  P   + ++P+   +
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW-DTVTPEAKSL 240
Query: 120 VQSCWVEDPNLRPSFSQIIRM 140
           + S    +P  R +  Q +++
Sbjct: 241 IDSMLTVNPKKRITADQALKV 261

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 7   EDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNN 66
           E+ LL       LK+ DFG ++                ++APE+          KK Y+ 
Sbjct: 143 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--------KKEYDG 194
Query: 67  KV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGLPE--DISPDLAFIVQ 121
           KV DV+S G+ L+ +L    PFE     +       +  + +  +P+   ISP+   ++ 
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 254
Query: 122 SCWVEDPNLRPSFSQI 137
             +V DP  R S  +I
Sbjct: 255 RIFVADPAKRISIPEI 270

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 131 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL--------EDND 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++   
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGL 239
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 240 LKKDPKQR 247

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 5   MKEDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL   +K   +K+ DFGL+                 ++APE+          + 
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---------RG 197
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIV 120
            Y+ K DV+S G++L+ LL+   PF G +                LP+   IS D   ++
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 121 QSCWVEDPNLRPSFSQII 138
           +      P+LR + +Q +
Sbjct: 258 RKMLTFHPSLRITATQCL 275

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 5   MKEDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL   +K   +K+ DFGL+                 ++APE+          + 
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---------RG 197
Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIV 120
            Y+ K DV+S G++L+ LL+   PF G +                LP+   IS D   ++
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 121 QSCWVEDPNLRPSFSQII 138
           +      P+LR + +Q +
Sbjct: 258 RKMLTFHPSLRITATQCL 275

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 152 LKPSNLLLNT-TSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 203
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 232

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 136 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL--------EDND 186
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++   
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGL 244
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 245 LKKDPKQR 252

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 170 LKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 221
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 250

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 150 LKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 201
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 275 LKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL--------EDND 325
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  + P+   ++   
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGL 383
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 384 LKKDPKQR 391

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 150 LKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 201
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKH 63
           +K  N+LL  +  + KLADFG+A +                WMAPE+   +         
Sbjct: 151 IKAGNILLNTEGHA-KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG-------- 201
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA------AFKHARPGLPEDISPDLA 117
           YN   D++S GI   E+   + P+  +  ++A +         F+      PE  S +  
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRK-----PELWSDNFT 256
Query: 118 FIVQSCWVEDPNLRPSFSQIIR 139
             V+ C V+ P  R + +Q+++
Sbjct: 257 DFVKQCLVKSPEQRATATQLLQ 278

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Query: 19  LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW 78
           +K+ DFG++                 +MAPE  +     +  +K Y+ K D++S GI + 
Sbjct: 193 VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINP----ELNQKGYSVKSDIWSLGITMI 248
Query: 79  ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQI 137
           EL   R P++             +   P LP D  S +       C  ++   RP++ ++
Sbjct: 249 ELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308
Query: 138 IR 139
           ++
Sbjct: 309 MQ 310

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 131 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL--------EDND 181
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  +SP+   ++   
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGL 239
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 240 LKKDPKQR 247

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 16/136 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL     + K+ADFGL+                 + APE+ S        + + 
Sbjct: 137 LKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG-------RLYA 188
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQ 121
             +VD++S G++L+ LL   LPF+            FK  R G   +PE ++  +A ++ 
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFD-----DEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 122 SCWVEDPNLRPSFSQI 137
                DP  R +   I
Sbjct: 244 HMLQVDPLKRATIKDI 259

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 154 LKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 205
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 154 LKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 205
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 135 LKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL--------EDND 185
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  + P+   ++   
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGL 243
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 244 LKKDPKQR 251

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 136 LKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL--------EDND 186
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  + P+   ++   
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGL 244
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 245 LKKDPKQR 252

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 278 LKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL--------EDND 328
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  + P+   ++   
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGL 386
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 387 LKKDPKQR 394

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 152 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 203
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 232

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K DN++L   +  +K+ADFG+ +                 ++APE+ +         + 
Sbjct: 147 LKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY--------QP 197
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD ++FG++L+E+L  + PFEG  +    + +  +H     P+ +S +   I +  
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEH-NVAYPKSMSKEAVAICKGL 255
Query: 124 WVEDPNLR 131
             + P  R
Sbjct: 256 MTKHPGKR 263

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +                 ++APE+         E   
Sbjct: 137 LKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL--------EDND 187
Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +       +  R   P  + P+   ++   
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGL 245
Query: 124 WVEDPNLR 131
             +DP  R
Sbjct: 246 LKKDPKQR 253

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 150 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 201
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 39/159 (24%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----------WMAPELYSTVTLRQ 58
           N+LL  D + +K+ DFGLA+              YR          W APE         
Sbjct: 142 NVLLDND-RLVKIGDFGLAKAVPEGHEY------YRVREDGDSPVFWYAPECLK------ 188
Query: 59  GEKKHYNNKVDVYSFGIVLWELLT----NRLPFEGMSNLQAAYAAAF----------KHA 104
            E K Y    DV+SFG+ L+ELLT    N+ P    + L                  +  
Sbjct: 189 -ECKFYYAS-DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 246
Query: 105 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 143
           R   P+    ++  ++++CW  + + RP+F  ++ +L  
Sbjct: 247 RLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 170 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 221
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 250

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 152 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 203
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 232

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 39/159 (24%)
Query: 9   NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----------WMAPELYSTVTLRQ 58
           N+LL  D + +K+ DFGLA+              YR          W APE         
Sbjct: 141 NVLLDND-RLVKIGDFGLAKAVPEGHEY------YRVREDGDSPVFWYAPECLK------ 187
Query: 59  GEKKHYNNKVDVYSFGIVLWELLT----NRLPFEGMSNLQAAYAAAF----------KHA 104
            E K Y    DV+SFG+ L+ELLT    N+ P    + L                  +  
Sbjct: 188 -ECKFYYAS-DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 245
Query: 105 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 143
           R   P+    ++  ++++CW  + + RP+F  ++ +L  
Sbjct: 246 RLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 154 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 205
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 158 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 209
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 238

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 150 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 201
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 154 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 205
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 155 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 206
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 235

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 156 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 207
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 236

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 147 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 198
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 227

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 154 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 205
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 16/136 (11%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL     + K+ADFGL+                 + APE+ S        + + 
Sbjct: 137 LKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG-------RLYA 188
Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQ 121
             +VD++S G++L+ LL   LPF+            FK  R G   +PE ++  +A ++ 
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFD-----DEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 122 SCWVEDPNLRPSFSQI 137
                DP  R +   I
Sbjct: 244 HMLQVDPLKRATIKDI 259

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 148 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 199
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 228

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5   MKEDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY---RWM-APELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR              Y   RW  APE+          
Sbjct: 148 LKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 199
Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
            K Y   +D++S G +L E+L+NR  F G
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 228

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-65
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-63
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-62
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-62
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-60
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-59
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-56
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-53
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-45
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-44
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-44
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-42
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-41
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-38
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-37
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-30
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-30
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-28
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-28
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-27
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-27
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-27
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-27
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-27
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-27
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-26
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-26
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-26
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-25
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-25
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-25
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-25
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-25
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-25
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-25
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-25
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-25
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-25
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-25
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-25
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-25
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-25
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-25
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-25
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-25
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-24
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-24
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-24
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-24
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-24
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-24
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-24
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-24
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-24
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-24
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-24
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-24
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-24
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	5e-24
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-23
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-23
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-23
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-23
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-23
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-23
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-23
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-23
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-23
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-23
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-23
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-23
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-23
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-23
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-23
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-22
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-22
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-22
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-22
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-22
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-22
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-22
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-22
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-21
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-21
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-21
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-21
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-20
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-20
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-20
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-19
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-19
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-18
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-18
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-18
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-18
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-18
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-18
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-18
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-18
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-17
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-17
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-17
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-17
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-17
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-17
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-17
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-17
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-17
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-17
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-17
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-17
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-17
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	8e-17
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-16
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-16
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-16
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-16
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-16
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-16
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-16
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-16
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-16
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-16
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	7e-16
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-16
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-15
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-15
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-15
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-15
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	7e-15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-14
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-14
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-14
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-14
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	7e-14
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-14
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-14
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-13
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-13
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-13
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-13
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-13
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-13
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-13
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-13
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-13
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-13
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-13
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-13
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-13
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-13
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-13
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	7e-13
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-12
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-12
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-12
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-12
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	9e-12
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-11
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-11
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-11
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-11
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-11
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-11
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	9e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-10
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-10
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-10
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-10
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-10
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-10
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-10
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-10
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-10
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-10
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-10
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	5e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-10
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-10
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-10
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	9e-10
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-09
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-09
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-09
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-09
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-09
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-09
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-08
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-05

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  202 bits (517), Expect = 1e-65
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 10/148 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+   + ++K+ DFGL+R +  T     +  GT  WMAPE+           + 
Sbjct: 165 LKSPNLLVD-KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL--------RDEP 215

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
            N K DVYSFG++LWEL T + P+  ++  Q   A  FK  R  +P +++P +A I++ C
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGC 275

Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
           W  +P  RPSF+ I+ +L   + +  PP
Sbjct: 276 WTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  195 bits (497), Expect = 8e-63
 Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 14/145 (9%)

Query: 6   KEDNLLLTPDQKS----LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +  N+ L    ++     K+ADFGL+++      ++   G ++WMAPE          E+
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAPETIG------AEE 202

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA--FKHARPGLPEDISPDLAFI 119
           + Y  K D YSF ++L+ +LT   PF+  S  +  +      +  RP +PED  P L  +
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAF 144
           ++ CW  DP  RP FS I++ L+  
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  195 bits (497), Expect = 1e-62
 Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 11/172 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL      LK+ DFG A +  +   MT   G+  WMAPE++        E  +Y
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACD--IQTHMTNNKGSAAWMAPEVF--------EGSNY 180

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           + K DV+S+GI+LWE++T R PF+ +         A     RP L +++   +  ++  C
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRC 240

Query: 124 WVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFS 175
           W +DP+ RPS  +I++++   +         +     +      +G +  + 
Sbjct: 241 WSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYV 292

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  193 bits (492), Expect = 3e-62
 Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 16/146 (10%)

Query: 5   MKEDNLLLT-------PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR 57
           +K  N+L+           K LK+ DFGLARE   T  M+A  G Y WMAPE+       
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMAPEVI------ 186

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
                 ++   DV+S+G++LWELLT  +PF G+  L  AY  A       +P       A
Sbjct: 187 --RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFA 244

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNA 143
            +++ CW  DP+ RPSF+ I+  L  
Sbjct: 245 KLMEDCWNPDPHSRPSFTNILDQLTT 270

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  189 bits (482), Expect = 1e-60
 Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 10/139 (7%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
              ++++  +  + +++   +                  W+APE      L++  +    
Sbjct: 140 NSRSVMID-EDMTARISMADVKFSFQ----SPGRMYAPAWVAPEA-----LQKKPEDTNR 189

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
              D++SF ++LWEL+T  +PF  +SN++     A +  RP +P  ISP ++ +++ C  
Sbjct: 190 RSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMN 249

Query: 126 EDPNLRPSFSQIIRMLNAF 144
           EDP  RP F  I+ +L   
Sbjct: 250 EDPAKRPKFDMIVPILEKM 268

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  186 bits (474), Expect = 5e-59
 Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT------EMMTAETGTYRWMAPELYSTVTL-R 57
           +K  N+    D   + + DFGL     V       + +  + G    +APE+   ++   
Sbjct: 156 LKSKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE-DISPDL 116
           + +K  ++   DV++ G + +EL     PF+        +       +P L +  +  ++
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG-TGMKPNLSQIGMGKEI 272

Query: 117 AFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS 152
           + I+  CW  +   RP+F++++ ML       R  S
Sbjct: 273 SDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLS 308

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  179 bits (457), Expect = 1e-56
 Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 13/148 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  +  ++K+ DFGLA E++           +G+  WMAPE+     +R  + 
Sbjct: 146 LKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDS 199

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA-AFKHARPGL---PEDISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N              P L     +    + 
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
            ++  C  +  + RPSF +I+  +    
Sbjct: 260 RLMAECLKKKRDERPSFPRILAEIEELA 287

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  151 bits (383), Expect = 2e-45
 Identities = 43/175 (24%), Positives = 63/175 (36%), Gaps = 28/175 (16%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEM---------------MTAETGTYRWMAPEL 50
              N L+  + K++ +ADFGLAR     +                     G   WMAPE+
Sbjct: 135 NSHNCLVR-ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193

Query: 51  YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLP 109
                +     + Y+ KVDV+SFGIVL E++               +    +       P
Sbjct: 194 -----ING---RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP 245

Query: 110 EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL---RPPSPSVPESDTN 161
            +  P    I   C   DP  RPSF ++   L      L    P  P + + D  
Sbjct: 246 PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQLEQLDRG 300

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  147 bits (374), Expect = 7e-44
 Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 30/167 (17%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREE-----TVTEMMTAETGTYRWMAPE-LYSTVTLRQ 58
           +K  N+L+  +  +  +AD GLA +       V        GT R+M PE L  ++    
Sbjct: 168 LKSKNILVKKN-GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226

Query: 59  GEKKHYNNKVDVYSFGIVLWELLT----------NRLPFEGMSNLQAAY-----AAAFKH 103
            +        D+YSFG++LWE+             +LP+  +     +Y         K 
Sbjct: 227 FQ---SYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283

Query: 104 ARPGLPE-----DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
            RP  P      +    +  ++  CW  +P  R +  ++ + L    
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  147 bits (372), Expect = 8e-44
 Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 28/163 (17%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMM-----TAETGTYRWMAPELYSTVTLRQG 59
           +K  N+L+  +     +AD GLA   + +            GT R+MAPE+       Q 
Sbjct: 139 LKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI--QV 195

Query: 60  EKKHYNNKVDVYSFGIVLWELLT----------NRLPFEGMSNLQAAY-----AAAFKHA 104
           +      +VD+++FG+VLWE+             + PF  +     ++            
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255

Query: 105 RPGLPEDISPD-----LAFIVQSCWVEDPNLRPSFSQIIRMLN 142
           RP +P     D     LA +++ CW ++P+ R +  +I + L 
Sbjct: 256 RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  140 bits (355), Expect = 6e-41
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 30/164 (18%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREE-----TVTEMMTAETGTYRWMAPE-LYSTVTLRQ 58
           +K  N+L+  +  +  +AD GLA        T+        GT R+MAPE L  ++ ++ 
Sbjct: 173 LKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231

Query: 59  GEKKHYNNKVDVYSFGIVLWELLT----------NRLPFEGMSNLQAAY-----AAAFKH 103
            E      + D+Y+ G+V WE+             +LP+  +     +          + 
Sbjct: 232 FE---SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288

Query: 104 ARPGLPE-----DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 142
            RP +P      +    +A I++ CW  +   R +  +I + L+
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  133 bits (335), Expect = 4e-38
 Identities = 42/190 (22%), Positives = 71/190 (37%), Gaps = 37/190 (19%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEM---------MTAETGTYRWMAPE-LYSTVT 55
              N+L+  D  +  ++DFGL+   T   +           +E GT R+MAPE L   V 
Sbjct: 147 NSRNVLVKND-GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN 205

Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELL---TNRLPFEGMSNLQAAYAA------------- 99
           LR  E      +VD+Y+ G++ WE+    T+  P E +   Q A+               
Sbjct: 206 LRDXE--SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQV 263

Query: 100 --AFKHARPGLPEDISPD------LAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
             + +  RP  PE    +      L   ++ CW +D   R +       +   +      
Sbjct: 264 LVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323

Query: 152 SPSVPESDTN 161
               P +  +
Sbjct: 324 KSVSPTAHHH 333

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  130 bits (328), Expect = 4e-37
 Identities = 41/163 (25%), Positives = 61/163 (37%), Gaps = 28/163 (17%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K  N+LL  +  +  +ADFGLA              + GT R+MAPE+       Q + 
Sbjct: 157 IKSKNVLLKNN-LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRD- 214

Query: 62  KHYNNKVDVYSFGIVLWELLT-----------NRLPFEGM-----SNLQAAYAAAFKHAR 105
                ++D+Y+ G+VLWEL +             LPFE       S          K  R
Sbjct: 215 --AFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR 272

Query: 106 PGLPEDISPD-----LAFIVQSCWVEDPNLRPSFSQIIRMLNA 143
           P L +          L   ++ CW  D   R S   +   +  
Sbjct: 273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  112 bits (282), Expect = 1e-30
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K DN+ +T    S+K+ D GLA  +  +       GT  +MAPE+Y         ++ Y+
Sbjct: 158 KCDNIFITGPTGSVKIGDLGLATLKRASFAKA-VIGTPEFMAPEMY---------EEKYD 207

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY-AAAFKHARPGLPEDISPDLAFIVQSCW 124
             VDVY+FG+ + E+ T+  P+    N    Y             +   P++  I++ C 
Sbjct: 208 ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCI 267

Query: 125 VEDPNLRPSFSQ 136
            ++ + R S   
Sbjct: 268 RQNKDERYSIKD 279

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  111 bits (279), Expect = 3e-30
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 17/138 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+ L   ++ +K+ DFGL          T   GT R+M+PE            + Y
Sbjct: 148 LKPSNIFLVDTKQ-VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQI--------SSQDY 198

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG-LPEDISPDLAFIVQSC 123
             +VD+Y+ G++L ELL         S         F   R G + +        ++Q  
Sbjct: 199 GKEVDLYALGLILAELLHVCDTAFETSKF-------FTDLRDGIISDIFDKKEKTLLQKL 251

Query: 124 WVEDPNLRPSFSQIIRML 141
             + P  RP+ S+I+R L
Sbjct: 252 LSKKPEDRPNTSEILRTL 269

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  107 bits (268), Expect = 2e-28
 Identities = 41/161 (25%), Positives = 56/161 (34%), Gaps = 27/161 (16%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR-------------EETVTEMMTAETGTYRWMAPELY 51
           +K  N+  T D   +K+ DFGL                       T + GT  +M+PE  
Sbjct: 144 LKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202

Query: 52  STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED 111
                       Y++KVD++S G++L+ELL    PF                  P L   
Sbjct: 203 --------HGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQ 251

Query: 112 ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS 152
             P    +VQ      P  RP    II   NA    L  P 
Sbjct: 252 KYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFEDLDFPG 290

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  108 bits (271), Expect = 2e-28
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 24/150 (16%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT----YRWMAPELYSTVTLRQGEKKHY 64
           N L+T ++  LK++DFG++REE       A  G      +W APE      L  G    Y
Sbjct: 243 NCLVT-EKNVLKISDFGMSREEADGVY-AASGGLRQVPVKWTAPE-----ALNYG---RY 292

Query: 65  NNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFI 119
           +++ DV+SFGI+LWE  +    P+  +SN Q       +    G     PE     +  +
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNLSNQQT-----REFVEKGGRLPCPELCPDAVFRL 347

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFLFTLR 149
           ++ CW  +P  RPSFS I + L +     R
Sbjct: 348 MEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  105 bits (263), Expect = 1e-27
 Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 13/136 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+ L P  +  KL DFGL  E         + G  R+MAPEL     L+      Y
Sbjct: 183 VKPANIFLGPRGR-CKLGDFGLLVELGTAGAGEVQEGDPRYMAPEL-----LQGS----Y 232

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
               DV+S G+ + E+  N     G    Q        +  P     +S +L  ++    
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ---GYLPPEFTAGLSSELRSVLVMML 289

Query: 125 VEDPNLRPSFSQIIRM 140
             DP LR +   ++ +
Sbjct: 290 EPDPKLRATAEALLAL 305

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  106 bits (266), Expect = 1e-27
 Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 11/165 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPEL---YSTVTLRQ 58
           +K  N L+      LKL DFG+A     +T + +  ++ G   +M PE     S+     
Sbjct: 181 LKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENG 238

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN-LQAAYAAAFKHARPGLPEDISPDLA 117
             K   + K DV+S G +L+ +   + PF+ + N +   +A    +     P+    DL 
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 298

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNE 162
            +++ C   DP  R S  +++   + ++     P   + +  T E
Sbjct: 299 DVLKCCLKRDPKQRISIPELLA--HPYVQIQTHPVNQMAKGTTEE 341

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  105 bits (263), Expect = 2e-27
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 11/137 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ LT D  +++L DFG+AR   +  E+  A  GT  +++PE+         E K 
Sbjct: 151 IKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC--------ENKP 201

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YNNK D+++ G VL+EL T +  FE   +++         + P +    S DL  +V   
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL 260

Query: 124 WVEDPNLRPSFSQIIRM 140
           +  +P  RPS + I+  
Sbjct: 261 FKRNPRDRPSVNSILEK 277

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  103 bits (258), Expect = 3e-27
 Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ L   Q ++KL DFGLAR     T       GT  +M+PE           +  
Sbjct: 142 LKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM--------NRMS 192

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN K D++S G +L+EL     PF    + +       +     +P   S +L  I+   
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTA-FSQKELAGKIREGKFRRIPYRYSDELNEIITRM 251

Query: 124 WVEDPNLRPSFSQIIRM 140
                  RPS  +I+  
Sbjct: 252 LNLKDYHRPSVEEILEN 268

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  103 bits (259), Expect = 5e-27
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 11/165 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPEL---YSTVTLRQ 58
           +K  N L+      LKL DFG+A     +T + +  ++ GT  +M PE     S+     
Sbjct: 153 LKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 210

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN-LQAAYAAAFKHARPGLPEDISPDLA 117
             K   + K DV+S G +L+ +   + PF+ + N +   +A    +     P+    DL 
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 270

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNE 162
            +++ C   DP  R S  +++   + ++     P   + +  T E
Sbjct: 271 DVLKCCLKRDPKQRISIPELLA--HPYVQIQTHPVNQMAKGTTEE 313

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  103 bits (259), Expect = 7e-27
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 11/165 (6%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPEL---YSTVTLRQ 58
           +K  N L+      LKL DFG+A     +T + +  ++ GT  +M PE     S+     
Sbjct: 134 LKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN-LQAAYAAAFKHARPGLPEDISPDLA 117
             K   + K DV+S G +L+ +   + PF+ + N +   +A    +     P+    DL 
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 251

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNE 162
            +++ C   DP  R S  +++   + ++     P   + +  T E
Sbjct: 252 DVLKCCLKRDPKQRISIPELLA--HPYVQIQTHPVNQMAKGTTEE 294

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =   99 bits (250), Expect = 4e-26
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 27/145 (18%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L++ +    K++DFGL +E +     + +       +W APE      LR+     ++
Sbjct: 147 NVLVS-EDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPE-----ALREK---KFS 192

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIV 120
            K DV+SFGI+LWE+ +  R+P+  +                G     P+   P +  ++
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKMDAPDGCPPAVYEVM 247

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++CW  D  +RPSF Q+   L    
Sbjct: 248 KNCWHLDAAMRPSFLQLREQLEHIK 272

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  101 bits (253), Expect = 8e-26
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 22/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L+T +   +K+ADFGLAR+    +     T      +WMAPE      L       Y 
Sbjct: 233 NVLVTEN-NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-----ALFDRV---YT 283

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
           ++ DV+SFG+++WE+ T    P+ G+   +      FK  + G     P + + +L  ++
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKEGHRMDKPANCTNELYMMM 338

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW   P+ RP+F Q++  L+  L
Sbjct: 339 RDCWHAVPSQRPTFKQLVEDLDRIL 363

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  100 bits (251), Expect = 9e-26
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 22/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L+T +   +K+ADFGLAR+    +     T      +WMAPE      L       Y 
Sbjct: 187 NVLVTEN-NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-----ALFDRV---YT 237

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
           ++ DV+SFG+++WE+ T    P+ G+   +      FK  + G     P + + +L  ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKEGHRMDKPANCTNELYMMM 292

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW   P+ RP+F Q++  L+  L
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRIL 317

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 99.2 bits (248), Expect = 1e-25
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 23/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L++ D  S K+ADFGLAR     E  TA  G     +W APE      +  G    + 
Sbjct: 139 NILVS-DTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPE-----AINYG---TFT 188

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
            K DV+SFGI+L E++T+ R+P+ GM+N +       ++   G     P++   +L  ++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCPEELYQLM 243

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW E P  RP+F  +  +L  F 
Sbjct: 244 RLCWKERPEDRPTFDYLRSVLEDFF 268

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  101 bits (254), Expect = 1e-25
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 27/145 (18%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L++ +    K++DFGL +E +     + +       +W APE      LR+     ++
Sbjct: 319 NVLVS-EDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPE-----ALREK---KFS 364

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
            K DV+SFGI+LWE+ +  R+P+  +                G     P+   P +  ++
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKMDAPDGCPPAVYDVM 419

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++CW  D   RP+F Q+   L    
Sbjct: 420 KNCWHLDAATRPTFLQLREQLEHIR 444

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  100 bits (250), Expect = 1e-25
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 22/154 (14%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N +L  D  ++ +ADFGL+R+    +       +    +W+A E     +L       Y 
Sbjct: 167 NCMLAED-MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE-----SLADNL---YT 217

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
              DV++FG+ +WE++T  + P+ G+ N +      + +   G     P +   ++  ++
Sbjct: 218 VHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-----YNYLIGGNRLKQPPECMEEVYDLM 272

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPS 154
             CW  DP  RPSF+ +   L   L  L   S S
Sbjct: 273 YQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 99.7 bits (249), Expect = 1e-25
 Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 23/163 (14%)

Query: 9   NLLLTPDQKSL--KLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKH 63
           N LLT        K+ DFG+AR+                 +WM PE        +G    
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-----AFMEG---I 221

Query: 64  YNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAF 118
           + +K D +SFG++LWE+ +   +P+   SN +       +    G     P++    +  
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-----LEFVTSGGRMDPPKNCPGPVYR 276

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTN 161
           I+  CW   P  RP+F+ I+  +          + ++P     
Sbjct: 277 IMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGP 319

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 98.9 bits (247), Expect = 2e-25
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 18/158 (11%)

Query: 6   KEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           K DN+L+      LK++DFG ++    +       TGT ++MAPE+           + Y
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII------DKGPRGY 202

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK----HARPGLPEDISPDL-AFI 119
               D++S G  + E+ T + PF     L    AA FK       P +PE +S +  AFI
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPF---YELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFI 259

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 157
           ++ C+  DP+ R   + ++   + FL        + P+
Sbjct: 260 LK-CFEPDPDKRACANDLLV--DEFLKVSSKKKKTQPK 294

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 99.6 bits (248), Expect = 2e-25
 Identities = 37/148 (25%), Positives = 53/148 (35%), Gaps = 25/148 (16%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAR-------------EETVTEMMTAETGTYRWMAPELYS 52
           K  N+  T D   +K+ DFGL                       T + GT  +M+PE   
Sbjct: 191 KPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE--- 246

Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 112
                Q    +Y++KVD++S G++L+ELL     F                  P L    
Sbjct: 247 -----QIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRIITDVRNLKFPLLFTQK 298

Query: 113 SPDLAFIVQSCWVEDPNLRPSFSQIIRM 140
            P    +VQ      P  RP  + II  
Sbjct: 299 YPQEHMMVQDMLSPSPTERPEATDIIEN 326

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 98.9 bits (247), Expect = 2e-25
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 22/148 (14%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N +L  D  ++ +ADFGL+++    +            +W+A E     +L       Y 
Sbjct: 177 NCMLR-DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE-----SLADRV---YT 227

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
           +K DV++FG+ +WE+ T    P+ G+ N +      + +   G     PED   +L  I+
Sbjct: 228 SKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-----YDYLLHGHRLKQPEDCLDELYEIM 282

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
            SCW  DP  RP+FS +   L   L +L
Sbjct: 283 YSCWRTDPLDRPTFSVLRLQLEKLLESL 310

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  100 bits (251), Expect = 3e-25
 Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 24/158 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKKHYNN 66
           N+L+  +    K+ADFGLAR     E    +      +W APE              +  
Sbjct: 310 NILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTI 360

Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQ 121
           K DV+SFGI+L EL T  R+P+ GM N +            G     P +    L  ++ 
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRMPCPPECPESLHDLMC 415

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESD 159
            CW ++P  RP+F  +   L  +        P     +
Sbjct: 416 QCWRKEPEERPTFEYLQAFLEDY---FTSTEPQYQPGE 450

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 99.4 bits (248), Expect = 3e-25
 Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 23/163 (14%)

Query: 9   NLLLTPDQKSL--KLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKH 63
           N LLT        K+ DFG+AR+                 +WM PE        +G    
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE-----AFMEGI--- 262

Query: 64  YNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAF 118
           + +K D +SFG++LWE+ +   +P+   SN +       +    G     P++    +  
Sbjct: 263 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-----LEFVTSGGRMDPPKNCPGPVYR 317

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTN 161
           I+  CW   P  RP+F+ I+  +          + ++P     
Sbjct: 318 IMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGP 360

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 99.4 bits (248), Expect = 3e-25
 Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 22/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L+T D   +K+ADFGLAR+    +     T      +WMAPE      L       Y 
Sbjct: 221 NVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-----ALFDRI---YT 271

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
           ++ DV+SFG++LWE+ T    P+ G+   +      FK  + G     P + + +L  ++
Sbjct: 272 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHRMDKPSNCTNELYMMM 326

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW   P+ RP+F Q++  L+  +
Sbjct: 327 RDCWHAVPSQRPTFKQLVEDLDRIV 351

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 99.8 bits (249), Expect = 6e-25
 Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 23/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L++      K+ADFGLAR     E  TA  G     +W APE  +           + 
Sbjct: 314 NILVS-ASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAIN--------FGSFT 363

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
            K DV+SFGI+L E++T  R+P+ GMSN +       +    G     PE+   +L  I+
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----IRALERGYRMPRPENCPEELYNIM 418

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
             CW   P  RP+F  I  +L+ F 
Sbjct: 419 MRCWKNRPEERPTFEYIQSVLDDFY 443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 97.3 bits (243), Expect = 6e-25
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 23/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N L+  +   +K+ADFGL+R  T  +  TA  G     +W APE     +L       ++
Sbjct: 141 NCLVG-ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-----SLAYN---KFS 190

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIV 120
            K DV++FG++LWE+ T    P+ G+   Q      ++          PE     +  ++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKDYRMERPEGCPEKVYELM 245

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++CW  +P+ RPSF++I +      
Sbjct: 246 RACWQWNPSDRPSFAEIHQAFETMF 270

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 97.3 bits (243), Expect = 7e-25
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 24/150 (16%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY-----RWMAPELYSTVTLRQGEKKH 63
           N +L  ++ ++K+ADFGLAR+    E  +    T      +WMA E     +L+  +   
Sbjct: 158 NCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-----SLQTQK--- 208

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAF 118
           +  K DV+SFG++LWEL+T    P+  ++           +   G     PE     L  
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-----TVYLLQGRRLLQPEYCPDPLYE 263

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
           ++  CW     +RPSFS+++  ++A   T 
Sbjct: 264 VMLKCWHPKAEMRPSFSELVSRISAIFSTF 293

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =   99 bits (249), Expect = 7e-25
 Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 24/158 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKKHYNN 66
           N+L+  +    K+ADFGLAR     E    +      +W APE              +  
Sbjct: 393 NILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTI 443

Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQ 121
           K DV+SFGI+L EL T  R+P+ GM N +            G     P +    L  ++ 
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRMPCPPECPESLHDLMC 498

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESD 159
            CW ++P  RP+F  +   L  +        P     +
Sbjct: 499 QCWRKEPEERPTFEYLQAFLEDY---FTSTEPQYQPGE 533

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 97.4 bits (243), Expect = 8e-25
 Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 12/139 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ +T     +KL D GL R   + T    +  GT  +M+PE           +  
Sbjct: 162 IKPANVFITATGV-VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI--------HENG 212

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEG-MSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQ 121
           YN K D++S G +L+E+   + PF G   NL +      +   P LP D  S +L  +V 
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN 272

Query: 122 SCWVEDPNLRPSFSQIIRM 140
            C   DP  RP  + +  +
Sbjct: 273 MCINPDPEKRPDVTYVYDV 291

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 97.4 bits (243), Expect = 8e-25
 Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 29/152 (19%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAR---------------EETVTEMMTAETGTYRWMAPEL 50
           K  N+ +   +  +K+ DFGLA+                   ++ +T+  GT  ++A E+
Sbjct: 143 KPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201

Query: 51  YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR---PG 107
                       HYN K+D+YS GI+ +E++    PF                +    P 
Sbjct: 202 LD-------GTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPD 251

Query: 108 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
             ++       I++     DPN RP    ++ 
Sbjct: 252 FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 97.3 bits (243), Expect = 8e-25
 Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 26/147 (17%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPE--LYSTVTLRQGEKKH 63
           N L+      +K+ DFG++R+   T+       T    RWM PE  +Y            
Sbjct: 163 NCLVG-ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK---------- 211

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAF 118
           +  + DV+SFG++LWE+ T  + P+  +SN +       +    G     P     ++  
Sbjct: 212 FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV-----IECITQGRVLERPRVCPKEVYD 266

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++  CW  +P  R +  +I ++L+A  
Sbjct: 267 VMLGCWQREPQQRLNIKEIYKILHALG 293

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 97.3 bits (243), Expect = 1e-24
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 18/143 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKH 63
           N+L+    + +K+ DFGLA+     E      G     +WMA E  L+            
Sbjct: 147 NVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI---------- 195

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           Y ++ DV+S+G+ +WEL+T    P++G+   +   +   K  R   P   + D+  I++ 
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRK 254

Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW+ D + RP F ++I   +   
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMA 277

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 96.9 bits (242), Expect = 1e-24
 Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 22/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L+    + +K++DFGL+R+    +     +      +WMA E     +L       Y 
Sbjct: 180 NILVAEG-RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE-----SLFDHI---YT 230

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
            + DV+SFG++LWE++T    P+ G+   +      F   + G     P++ S ++  ++
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERL-----FNLLKTGHRMERPDNCSEEMYRLM 285

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
             CW ++P+ RP F+ I + L   +
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKMM 310

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 97.4 bits (243), Expect = 1e-24
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 22/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYN 65
           N L+      +K+ DFG++R+   T+       T    RWM PE     ++   +   + 
Sbjct: 188 NCLVGQG-LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE-----SILYRK---FT 238

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
            + DV+SFG+VLWE+ T  + P+  +SN +A           G     P    P++  I+
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-----IDCITQGRELERPRACPPEVYAIM 293

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW  +P  R S   +   L A  
Sbjct: 294 RGCWQREPQQRHSIKDVHARLQALA 318

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 96.6 bits (241), Expect = 1e-24
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 24/150 (16%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY-----RWMAPELYSTVTLRQGEKKH 63
           N +L  +  ++K+ADFGLAR+    E  + +   +     +W A E     +L+      
Sbjct: 154 NCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE-----SLQTYR--- 204

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAF 118
           +  K DV+SFG++LWELLT    P+  +                G     PE     L  
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL-----THFLAQGRRLPQPEYCPDSLYQ 259

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
           ++Q CW  DP +RP+F  ++  +   +  L
Sbjct: 260 VMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 96.1 bits (240), Expect = 1e-24
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 27/147 (18%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKH 63
           N L+      +K++DFG+ R     +   +  GT    +W APE   Y            
Sbjct: 134 NCLVD-RDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFK---------- 181

Query: 64  YNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAF 118
           Y++K DV++FGI++WE+ +  ++P++  +N +            G     P   S  +  
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-----VLKVSQGHRLYRPHLASDTIYQ 236

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFL 145
           I+ SCW E P  RP+F Q++  +    
Sbjct: 237 IMYSCWHELPEKRPTFQQLLSSIEPLR 263

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 97.5 bits (243), Expect = 2e-24
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 24/150 (16%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY-----RWMAPELYSTVTLRQGEKKH 63
           N +L  ++ ++K+ADFGLAR+    E  +    T      +WMA E     +L+  +   
Sbjct: 222 NCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-----SLQTQK--- 272

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAF 118
           +  K DV+SFG++LWEL+T    P+  ++           +   G     PE     L  
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-----TVYLLQGRRLLQPEYCPDPLYE 327

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
           ++  CW     +RPSFS+++  ++A   T 
Sbjct: 328 VMLKCWHPKAEMRPSFSELVSRISAIFSTF 357

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 95.3 bits (238), Expect = 2e-24
 Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 27/147 (18%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKH 63
           N L+  + + +K++DFG+ R     +  T+ TGT    +W +PE   +S           
Sbjct: 134 NCLVG-ENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSR---------- 181

Query: 64  YNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAF 118
           Y++K DV+SFG+++WE+ +  ++P+E  SN +       +    G     P   S  +  
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVYQ 236

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFL 145
           I+  CW E P  RP+FS+++R L    
Sbjct: 237 IMNHCWRERPEDRPAFSRLLRQLAEIA 263

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 95.4 bits (238), Expect = 3e-24
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 27/147 (18%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKH 63
           N L+  DQ  +K++DFGL+R     E  T+  G+    RW  PE  +YS           
Sbjct: 150 NCLVN-DQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSK---------- 197

Query: 64  YNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAF 118
           +++K D+++FG+++WE+ +  ++P+E  +N +       +H   GL    P   S  +  
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-----AEHIAQGLRLYRPHLASEKVYT 252

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFL 145
           I+ SCW E  + RP+F  ++  +   +
Sbjct: 253 IMYSCWHEKADERPTFKILLSNILDVM 279

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 97.5 bits (243), Expect = 4e-24
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 23/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N L+  +   +K+ADFGL+R  T  +  TA  G     +W APE  +           ++
Sbjct: 348 NCLVG-ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA--------YNKFS 397

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIV 120
            K DV++FG++LWE+ T    P+ G+   Q      ++          PE     +  ++
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKDYRMERPEGCPEKVYELM 452

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           ++CW  +P+ RPSF++I +      
Sbjct: 453 RACWQWNPSDRPSFAEIHQAFETMF 477

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 95.4 bits (238), Expect = 5e-24
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+LL+     +K+ DFGLAR+         +       +WMAPE     T+       Y 
Sbjct: 178 NILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-----TIFDRV---YT 228

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
            + DV+SFG++LWE+ +    P+ G+   +       +  R   P+  +P++   +  CW
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW 288

Query: 125 VEDPNLRPSFSQIIRMLNAFL 145
             +P+ RP+FS+++  L   L
Sbjct: 289 HGEPSQRPTFSELVEHLGNLL 309

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 95.0 bits (237), Expect = 5e-24
 Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 30/148 (20%)

Query: 7   EDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY----RWMAPE--LYSTVTLRQGE 60
            +    T +   +KL+D G++                     W+ PE             
Sbjct: 148 REEDRKTGNPPFIKLSDPGISIT-------VLPKDILQERIPWVPPECIENP-------- 192

Query: 61  KKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLA 117
            K+ N   D +SFG  LWE+ +    P   + + +       +       LP   + +LA
Sbjct: 193 -KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-----LQFYEDRHQLPAPKAAELA 246

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
            ++ +C   +P+ RPSF  IIR LN+  
Sbjct: 247 NLINNCMDYEPDHRPSFRAIIRDLNSLF 274

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 97.6 bits (243), Expect = 5e-24
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 21/144 (14%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPELYSTVTLRQGEKKHYNN 66
           N+L++     +KL DFGL+R    +    A  G    +WMAPE     ++       + +
Sbjct: 521 NVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-----SINFR---RFTS 571

Query: 67  KVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQ 121
             DV+ FG+ +WE+L +   PF+G+ N              G    +P +  P L  ++ 
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTLYSLMT 626

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFL 145
            CW  DP+ RP F+++   L+  L
Sbjct: 627 KCWAYDPSRRPRFTELKAQLSTIL 650

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 95.8 bits (239), Expect = 5e-24
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYN 65
           N L+  +   +K+ADFGL+R     +   A+       RWM PE     ++       Y 
Sbjct: 204 NCLVGEN-MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE-----SIFYNR---YT 254

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
            + DV+++G+VLWE+ +    P+ GM++ +        + R G     PE+   +L  ++
Sbjct: 255 TESDVWAYGVVLWEIFSYGLQPYYGMAHEEV-----IYYVRDGNILACPENCPLELYNLM 309

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW + P  RPSF  I R+L    
Sbjct: 310 RLCWSKLPADRPSFCSIHRILQRMC 334

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 95.4 bits (238), Expect = 5e-24
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 29/147 (19%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKH 63
           N+L+  +    K+ADFGL+R +   E+   +T      RWMA E   YS           
Sbjct: 172 NILVGEN-YVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESLNYSV---------- 217

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAF 118
           Y    DV+S+G++LWE+++    P+ GM+  +      ++    G     P +   ++  
Sbjct: 218 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-----YEKLPQGYRLEKPLNCDDEVYD 272

Query: 119 IVQSCWVEDPNLRPSFSQIIRMLNAFL 145
           +++ CW E P  RPSF+QI+  LN  L
Sbjct: 273 LMRQCWREKPYERPSFAQILVSLNRML 299

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 93.8 bits (234), Expect = 1e-23
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 22/144 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYN 65
           N+L+  D+ ++K++D GL RE    +       +    RWMAPE      +  G    ++
Sbjct: 158 NVLVY-DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE-----AIMYG---KFS 208

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
              D++S+G+VLWE+ +    P+ G SN         +  R       P+D    +  ++
Sbjct: 209 IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----VEMIRNRQVLPCPDDCPAWVYALM 263

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAF 144
             CW E P+ RP F  I   L A+
Sbjct: 264 IECWNEFPSRRPRFKDIHSRLRAW 287

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 94.3 bits (235), Expect = 1e-23
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 22/145 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY---RWMAPELYSTVTLRQGEKKHYN 65
           N ++  D  ++K+ DFG+ R+   T+            RWM+PE     +L+ G    + 
Sbjct: 168 NCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-----SLKDGV---FT 218

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIV 120
              DV+SFG+VLWE+ T    P++G+SN Q       +    G     P++    L  ++
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-----LRFVMEGGLLDKPDNCPDMLFELM 273

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW  +P +RPSF +II  +   +
Sbjct: 274 RMCWQYNPKMRPSFLEIISSIKEEM 298

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 93.9 bits (234), Expect = 1e-23
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 19/156 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMM-TAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+LL  ++   K++DFGL++     +   TA +      +W APE   +           
Sbjct: 140 NVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--------- 189

Query: 63  HYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
            ++++ DV+S+G+ +WE L+  + P++ M   +   A   +  R   P +  P+L  ++ 
Sbjct: 190 -FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQGKRMECPPECPPELYALMS 247

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 157
            CW+     RP F  + + + A  ++L         
Sbjct: 248 DCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHH 283

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 93.9 bits (234), Expect = 2e-23
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+LLT   +  K+ DFGLAR+         +       +WMAPE     ++       Y 
Sbjct: 175 NILLTHG-RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE-----SIFNCV---YT 225

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
            + DV+S+GI LWEL +    P+ GM      Y    +  R   PE    ++  I+++CW
Sbjct: 226 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCW 285

Query: 125 VEDPNLRPSFSQIIRMLNAFL 145
             DP  RP+F QI++++   +
Sbjct: 286 DADPLKRPTFKQIVQLIEKQI 306

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 93.5 bits (233), Expect = 2e-23
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 25/146 (17%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTY--RWMAPE--LYSTVTLRQGEKKHY 64
           N+L++     +KL DFGL+R    +    A  G    +WMAPE   +          + +
Sbjct: 146 NVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF----------RRF 194

Query: 65  NNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFI 119
            +  DV+ FG+ +WE+L +   PF+G+ N              G    +P +  P L  +
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTLYSL 249

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFL 145
           +  CW  DP+ RP F+++   L+  L
Sbjct: 250 MTKCWAYDPSRRPRFTELKAQLSTIL 275

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 94.3 bits (235), Expect = 2e-23
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 41/161 (25%)

Query: 20  KLADFGLARE-ETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKHYNNKVDVYSF 73
           K++DFGL+R  E   E     +G     RW APE   Y          + + +  DV+SF
Sbjct: 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY----------RKFTSASDVWSF 236

Query: 74  GIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDP 128
           GIV+WE++T    P+  +SN +       K    G     P D    +  ++  CW ++ 
Sbjct: 237 GIVMWEVMTYGERPYWELSNHEV-----MKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 291

Query: 129 NLRPSFSQIIRMLNAFL---------------FTLRPPSPS 154
             RP F+ I+ +L+  +                ++R PS S
Sbjct: 292 ARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPSTS 332

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 94.0 bits (234), Expect = 2e-23
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 6   KEDNLLLTPDQKSLKLADFG----LAREETVTEMMTAET--GTYRWMAPELYSTVTLRQG 59
           K DN+LL+ D     L DFG    L  +     ++T +   GT   MAPE    V + + 
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE----VVMGKP 232

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA-AAFKHARPGLPEDISPDLAF 118
                + KVD++S   ++  +L    P+            A+       +P   +P  A 
Sbjct: 233 ----CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQ 288

Query: 119 IVQSCWVEDPNLRPS 133
            +Q    ++P  R S
Sbjct: 289 AIQEGLRKEPVHRAS 303

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 93.1 bits (232), Expect = 3e-23
 Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 27/151 (17%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMM-TAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+LL   Q   K++DFGL++     E    A+T      +W APE   Y           
Sbjct: 147 NVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--------- 196

Query: 63  HYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLA 117
            +++K DV+SFG+++WE  +  + P+ GM   +            G     P     ++ 
Sbjct: 197 -FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCPREMY 250

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
            ++  CW  D   RP F+ +   L  + + +
Sbjct: 251 DLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 93.5 bits (233), Expect = 3e-23
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+LL      +++ADFG+A      +     +      +WMA E              Y 
Sbjct: 145 NVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF--------GKYT 195

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           ++ DV+S+G+ +WEL+T    P+ G+   +       K  R   P+  + D+  ++  CW
Sbjct: 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-PDLLEKGERLAQPQICTIDVYMVMVKCW 254

Query: 125 VEDPNLRPSFSQIIRMLNAFL 145
           + D N+RP+F ++        
Sbjct: 255 MIDENIRPTFKELANEFTRMA 275

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 93.8 bits (233), Expect = 3e-23
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+LL+     +K+ DFGLAR+         +       +WMAPE            + Y 
Sbjct: 223 NILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE--------TIFDRVYT 273

Query: 66  NKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
            + DV+SFG++LWE+ +    P+ G+   +       +  R   P+  +P++   +  CW
Sbjct: 274 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW 333

Query: 125 VEDPNLRPSFSQIIRMLNAFL 145
             +P+ RP+FS+++  L   L
Sbjct: 334 HGEPSQRPTFSELVEHLGNLL 354

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 93.5 bits (233), Expect = 3e-23
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 22/135 (16%)

Query: 20  KLADFGLARE-ETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI 75
           K++DFGL+R  E   +     TG     RW APE      +       +++  DV+SFG+
Sbjct: 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE-----AIAFR---TFSSASDVWSFGV 242

Query: 76  VLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIVQSCWVEDPNL 130
           V+WE+L     P+  M+N              G     P      L  ++  CW +D   
Sbjct: 243 VMWEVLAYGERPYWNMTNRDV-----ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQ 297

Query: 131 RPSFSQIIRMLNAFL 145
           RP FSQI+ +L+A +
Sbjct: 298 RPRFSQIVSVLDALI 312

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 93.5 bits (233), Expect = 4e-23
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 13/141 (9%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+L+T   K +K+ DFGLAR+                 +WMAPE     +L +G    Y 
Sbjct: 202 NVLVTHG-KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE-----SLFEGI---YT 252

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
            K DV+S+GI+LWE+ +    P+ G+      Y       +   P   + ++  I+QSCW
Sbjct: 253 IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCW 312

Query: 125 VEDPNLRPSFSQIIRMLNAFL 145
             D   RPSF  +   L   L
Sbjct: 313 AFDSRKRPSFPNLTSFLGCQL 333

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 93.9 bits (233), Expect = 4e-23
 Identities = 16/137 (11%), Positives = 44/137 (32%), Gaps = 13/137 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPEL---YSTVTLRQGEKK 62
           +  +++L      + L  F     +         + +  +  PEL    +T++  +  + 
Sbjct: 233 RPVDIVLDQRGG-VFLTGFEHLVRDG---ARVVSSVSRGFEPPELEARRATISYHRDRRT 288

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
                 D ++ G+V++ +    LP              F+       ++I   +  +++ 
Sbjct: 289 LMTFSFDAWALGLVIYWIWCADLPITK-DAALGGSEWIFRS-----CKNIPQPVRALLEG 342

Query: 123 CWVEDPNLRPSFSQIIR 139
                   R    Q + 
Sbjct: 343 FLRYPKEDRLLPLQAME 359

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 92.8 bits (231), Expect = 5e-23
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 30/171 (17%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKH 63
           N+L+    + +K+ DFGLA+     E      G     +WMA E  L+            
Sbjct: 147 NVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI---------- 195

Query: 64  YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           Y ++ DV+S+G+ +WEL+T    P++G+   +   +   K  R   P   + D+  I+  
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVK 254

Query: 123 CWVEDPNLRPSFSQIIRMLNAFL------------FTLRPPSPSVPESDTN 161
           CW+ D + RP F ++I   +                 +  PSP+       
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRA 305

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 91.5 bits (228), Expect = 8e-23
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 24/135 (17%)

Query: 20  KLADFGLAREETVTEMMTAETGTY--RWMAPE--LYSTVTLRQGEKKHYNNKVDVYSFGI 75
           KL DFGL+R     +   A       +WM+PE   +            +    DV+ F +
Sbjct: 153 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR----------FTTASDVWMFAV 202

Query: 76  VLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNL 130
            +WE+L+  + PF  + N              G     P+   P L  ++  CW  DP+ 
Sbjct: 203 CMWEILSFGKQPFFWLENKDV-----IGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSD 257

Query: 131 RPSFSQIIRMLNAFL 145
           RP F++++  L+   
Sbjct: 258 RPRFTELVCSLSDVY 272

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 91.9 bits (229), Expect = 1e-22
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT---YRWMAPELYSTVTLRQGEKKHYN 65
           N+LLT      K+ DFGLAR+         +       +WMAPE     ++       Y 
Sbjct: 194 NVLLTNG-HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE-----SIFDCV---YT 244

Query: 66  NKVDVYSFGIVLWELLT-NRLPFEG-MSNLQAAYAAAFKHARPGL----PEDISPDLAFI 119
            + DV+S+GI+LWE+ +    P+ G + N +      +K  + G     P     ++  I
Sbjct: 245 VQSDVWSYGILLWEIFSLGLNPYPGILVNSKF-----YKLVKDGYQMAQPAFAPKNIYSI 299

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFL 145
           +Q+CW  +P  RP+F QI   L    
Sbjct: 300 MQACWALEPTHRPTFQQICSFLQEQA 325

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 92.4 bits (230), Expect = 1e-22
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 37/173 (21%)

Query: 20  KLADFGLARE-ETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKKHYNNKVDVYSF 73
           K++DFGL R  E   E      G     RW +PE   Y          + + +  DV+S+
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY----------RKFTSASDVWSY 236

Query: 74  GIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDP 128
           GIVLWE+++    P+  MSN         K    G     P D    L  ++  CW +D 
Sbjct: 237 GIVLWEVMSYGERPYWEMSNQDV-----IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291

Query: 129 NLRPSFSQIIRMLNAFL-----------FTLRPPSPSVPESDTNEAAATSNGA 170
           N RP F QI+ +L+  +              RP +  + +S+ +     + G 
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGD 344

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 91.2 bits (227), Expect = 1e-22
 Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 18/140 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMM-TAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           NLLL   +  +K+ DFGL R     +     +      + W APE     T         
Sbjct: 151 NLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT--------- 200

Query: 63  HYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
            +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED   D+  ++ 
Sbjct: 201 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMV 259

Query: 122 SCWVEDPNLRPSFSQIIRML 141
            CW   P  RP+F  +   L
Sbjct: 260 QCWAHKPEDRPTFVALRDFL 279

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 91.7 bits (228), Expect = 1e-22
 Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 21/165 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT----------EMMTAETGTYRWMAPELYSTV 54
           +K  N+LL  D+    L D G   +  +           +   A+  T  + APEL    
Sbjct: 160 LKPTNILLG-DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL---F 215

Query: 55  TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDIS 113
           +++       + + DV+S G VL+ ++    P++ +     + A A +           S
Sbjct: 216 SVQSHCV--IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHS 273

Query: 114 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPES 158
             L  ++ S    DP+ RP    ++  L A    L+PP+P    +
Sbjct: 274 SALWQLLNSMMTVDPHQRPHIPLLLSQLEA----LQPPAPGQHTT 314

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 91.1 bits (227), Expect = 2e-22
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 25/171 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K  N+L+  + K+LK+ DFG+A+   E ++T+      GT ++ +PE        Q + 
Sbjct: 137 IKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHV-LGTVQYFSPE--------QAKG 186

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR---PGLP----EDISP 114
           +  +   D+YS GIVL+E+L    PF G + +  A     KH +   P +     +DI  
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI----KHIQDSVPNVTTDVRKDIPQ 242

Query: 115 DLAFIVQSCWVEDPNLRP-SFSQIIRMLNAFLFTLRPPSPSVPESDTNEAA 164
            L+ ++     +D   R  +  ++   L++ L   R              A
Sbjct: 243 SLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYELDKMKTIA 293

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 91.2 bits (227), Expect = 2e-22
 Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 41/171 (23%)

Query: 9   NLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+LL  + + +K+ DFGLA+      E             W APE               
Sbjct: 164 NVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK--------- 213

Query: 63  HYNNKVDVYSFGIVLWELLT---------------NRLPFEGMSNLQAAYAAAFKHARPG 107
            +    DV+SFG+ L+ELLT                 +    M+ L+       +    G
Sbjct: 214 -FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL-----TELLERG 267

Query: 108 ----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPS 154
                P+    ++  ++++CW  + + RP+F  +I +L       +  +PS
Sbjct: 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 93.1 bits (231), Expect = 2e-22
 Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 22/163 (13%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMM-TAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+LL  ++   K++DFGL++     +   TA +      +W APE   +           
Sbjct: 466 NVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--------- 515

Query: 63  HYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
            ++++ DV+S+G+ +WE L+  + P++ M   +   A   +  R   P +  P+L  ++ 
Sbjct: 516 -FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQGKRMECPPECPPELYALMS 573

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAA 164
            CW+     RP F  + + + A        +  V      E A
Sbjct: 574 DCWIYKWEDRPDFLTVEQRMRAC---YYSLASKVEGGSALEVA 613

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 89.7 bits (223), Expect = 5e-22
 Identities = 22/134 (16%), Positives = 48/134 (35%), Gaps = 14/134 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           + D      ++   K+ D G     T       E G  R++A E+     L+  E   + 
Sbjct: 160 EGDEDDWASNKVMFKIGDLGHV---TRISSPQVEEGDSRFLANEV-----LQ--ENYTHL 209

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
            K D+++  + +                   +    +   P +P+ +S +   +++    
Sbjct: 210 PKADIFALALTVVCAAGAEPLPRNGD----QWHEIRQGRLPRIPQVLSQEFTELLKVMIH 265

Query: 126 EDPNLRPSFSQIIR 139
            DP  RPS   +++
Sbjct: 266 PDPERRPSAMALVK 279

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 89.2 bits (222), Expect = 8e-22
 Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 25/180 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET----GTYRWMAPELYSTVTLRQGE 60
           +K  N++++     +K+ DFG+AR    +     +T    GT ++++PE        Q  
Sbjct: 142 VKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QAR 192

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR------PGLPEDISP 114
               + + DVYS G VL+E+LT   PF G S +  AY    +H R          E +S 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSA 248

Query: 115 DLAFIVQSCWVEDPNLRP-SFSQIIRMLNAFLFTLRPPSPS-VPESDTNEAAATSNGAMT 172
           DL  +V     ++P  R  + +++   L        P +P  + +++     +++ G ++
Sbjct: 249 DLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 89.0 bits (221), Expect = 1e-21
 Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 30/163 (18%)

Query: 5   MKEDNLLLTP---DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K  N++       Q   KL DFG ARE    E   +  GT  ++ P++Y    LR+  +
Sbjct: 138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQ 197

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ--------------AAYAAAFKHARPG 107
           K Y   VD++S G+  +   T  LPF      +              +   +  + A  G
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG 257

Query: 108 -------------LPEDISPDLAFIVQSCWVEDPNLRPSFSQI 137
                        L   +   L  ++ +    D      F Q 
Sbjct: 258 PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 89.9 bits (223), Expect = 1e-21
 Identities = 35/171 (20%), Positives = 57/171 (33%), Gaps = 30/171 (17%)

Query: 5   MKEDNLLLTPD---QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K  N++       Q   KL DFG ARE    E   +  GT  ++ P++Y    LR+  +
Sbjct: 138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQ 197

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSN-----------LQAAYAAAFKHARPG--- 107
           K Y   VD++S G+  +   T  LPF                +    + A    +     
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG 257

Query: 108 -------------LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
                        L   +   L  ++ +    D      F Q     +  L
Sbjct: 258 PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 87.9 bits (218), Expect = 5e-21
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 28/182 (15%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-------------EMMTAETGTYRWMAPELY 51
           +K +NLLL+ +Q ++KL DFG A   +               E       T  +  PE+ 
Sbjct: 164 LKVENLLLS-NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222

Query: 52  STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED 111
              +           K D+++ G +L+ L   + PFE  + L         + +  +P  
Sbjct: 223 DLYS-----NFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL------RIVNGKYSIPPH 271

Query: 112 --ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNG 169
                    ++++    +P  R S ++++  L   +   R  +P  P ++  E       
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE-IAAARNVNPKSPITELLEQNGGYGS 330

Query: 170 AM 171
           A 
Sbjct: 331 AT 332

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 87.8 bits (217), Expect = 9e-21
 Identities = 16/158 (10%), Positives = 43/158 (27%), Gaps = 13/158 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           ++  +++L      + L  F     +  + +             A  +       Q    
Sbjct: 237 LRPVDIVLDQRG-GVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPF---GQHHPT 292

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
                 D ++ G+ ++ +    LP              F+       ++I   +  +++ 
Sbjct: 293 LMTFAFDTWTLGLAIYWIWCADLPNTD-DAALGGSEWIFRS-----CKNIPQPVRALLEG 346

Query: 123 CWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDT 160
                   R    Q +     +       S ++P   T
Sbjct: 347 FLRYPKEDRLLPLQAMET-PEYEQLRTELSAALPLYQT 383

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 86.2 bits (214), Expect = 1e-20
 Identities = 38/162 (23%), Positives = 60/162 (37%), Gaps = 41/162 (25%)

Query: 9   NLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+L+   +  +K+ DFGL +  ET  E  T +        W APE  + S          
Sbjct: 156 NVLVE-SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSK--------- 205

Query: 63  HYNNKVDVYSFGIVLWELLT---------------NRLPFEGMSNLQAAYAAAFKHARPG 107
            +    DV+SFG+ L ELLT                      M+  +          + G
Sbjct: 206 -FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL-----VNTLKEG 259

Query: 108 ----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
                P +   ++  +++ CW   P+ R SF  +I    A L
Sbjct: 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 85.8 bits (213), Expect = 1e-20
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 42/163 (25%)

Query: 9   NLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+L+  ++  +K+ DFGL +      E    +        W APE    S          
Sbjct: 144 NILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK--------- 193

Query: 63  HYNNKVDVYSFGIVLWELLT----------------NRLPFEGMSNLQAAYAAAFKHARP 106
            ++   DV+SFG+VL+EL T                       M           +  + 
Sbjct: 194 -FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL-----IELLKN 247

Query: 107 G----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
                 P+    ++  I+  CW  + N RPSF  +   ++   
Sbjct: 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 86.3 bits (214), Expect = 1e-20
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 42/163 (25%)

Query: 9   NLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+L+  ++  +K+ DFGL +      E    +        W APE    S          
Sbjct: 175 NILVE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK--------- 224

Query: 63  HYNNKVDVYSFGIVLWELLT----------------NRLPFEGMSNLQAAYAAAFKHARP 106
            ++   DV+SFG+VL+EL T                       M           +  + 
Sbjct: 225 -FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL-----IELLKN 278

Query: 107 G----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
                 P+    ++  I+  CW  + N RPSF  +   ++   
Sbjct: 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 86.6 bits (214), Expect = 2e-20
 Identities = 18/142 (12%), Positives = 39/142 (27%), Gaps = 16/142 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
              DNL + PD   L L D     +        A +    +   E              +
Sbjct: 220 FTPDNLFIMPDG-RLMLGDVSALWKVG--TRGPASSVPVTYAPREF------LNASTATF 270

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE-------DISPDLA 117
            + ++ +  G+ ++ +    LPF  ++              PG           +   + 
Sbjct: 271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVK 330

Query: 118 FIVQSCWVEDPNLRPSFSQIIR 139
            ++      D   R    + + 
Sbjct: 331 TLIGRFLNFDRRRRLLPLEAME 352

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 82.4 bits (204), Expect = 3e-19
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 6/133 (4%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K  N+LL  ++  +KL DFG++      +      G   +MAPE        +     Y+
Sbjct: 152 KPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKP---DYD 207

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI--SPDLAFIVQSC 123
            + DV+S GI L EL T + P++             +   P LP  +  S D    V+ C
Sbjct: 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDC 267

Query: 124 WVEDPNLRPSFSQ 136
             +D   RP +++
Sbjct: 268 LTKDHRKRPKYNK 280

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 82.4 bits (204), Expect = 4e-19
 Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 43/181 (23%)

Query: 9   NLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGT---YRWMAPE--LYSTVTLRQGEKK 62
           N+L+   +  +K+ADFGLA+      +             W APE    +          
Sbjct: 157 NILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--------- 206

Query: 63  HYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGL------------- 108
            ++ + DV+SFG+VL+EL T             A +       R                
Sbjct: 207 -FSRQSDVWSFGVVLYELFTYCDKSCSPS----AEFLRMMGCERDVPALSRLLELLEEGQ 261

Query: 109 ----PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR----PPSPSVPESDT 160
               P     ++  +++ CW   P  RPSFS +   L+      R        + PE   
Sbjct: 262 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKH 321

Query: 161 N 161
           +
Sbjct: 322 H 322

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 82.1 bits (203), Expect = 1e-18
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 5   MKEDNLLLTPDQKS----LKLADFGLAR----EETVTEMMTAETGTYRWMAPELYSTVTL 56
           +K  N+L++           ++DFGL +            +   GT  W+APE+     L
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM-----L 198

Query: 57  RQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYA-AAFKHARPGLPEDISP 114
            +  K++    VD++S G V + +++    PF      QA     A         +    
Sbjct: 199 SEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDV 258

Query: 115 DLAFIVQSCWVEDPNLRPSFSQI 137
               +++     DP  RPS   +
Sbjct: 259 IARELIEKMIAMDPQKRPSAKHV 281

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 80.8 bits (200), Expect = 1e-18
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 6/132 (4%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K  N+L+      +K+ DFG++           + G   +MAPE        +  +K Y+
Sbjct: 137 KPSNVLIN-ALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE----RINPELNQKGYS 191

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQSCW 124
            K D++S GI + EL   R P++             +   P LP D  S +       C 
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL 251

Query: 125 VEDPNLRPSFSQ 136
            ++   RP++ +
Sbjct: 252 KKNSKERPTYPE 263

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 79.7 bits (197), Expect = 3e-18
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+L+T  +  ++LADFG++ +   T +   ++  GT  WMAPE+   V     +   
Sbjct: 144 KAGNVLMT-LEGDIRLADFGVSAKNLKT-LQKRDSFIGTPYWMAPEV---VMCETMKDTP 198

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y+ K D++S GI L E+     P   ++ ++     A K   P L  P   S +    ++
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSDPPTLLTPSKWSVEFRDFLK 257

Query: 122 SCWVEDPNLRPSFSQIIR 139
               ++P  RPS +Q++ 
Sbjct: 258 IALDKNPETRPSAAQLLE 275

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 79.6 bits (197), Expect = 3e-18
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET-GTYRWMAPELYSTVTLRQGEKKHY 64
           K  NLL+  +   +K+ADFG++ E   ++ + + T GT  +MAPE  S        +K +
Sbjct: 164 KPSNLLVG-EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLS------ETRKIF 216

Query: 65  N-NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQ 121
           +   +DV++ G+ L+  +  + PF     +   ++   K      P+  DI+ DL  ++ 
Sbjct: 217 SGKALDVWAMGVTLYCFVFGQCPFMD-ERIMCLHSKI-KSQALEFPDQPDIAEDLKDLIT 274

Query: 122 SCWVEDPNLRPSFSQIIR 139
               ++P  R    +I  
Sbjct: 275 RMLDKNPESRIVVPEIKL 292

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 79.6 bits (197), Expect = 4e-18
 Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 31/156 (19%)

Query: 6   KEDNLLLTPDQK-SLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           K  N+LL  D+    K+ DFG+++   E   T + T   GT  ++ PE +          
Sbjct: 166 KSINILL--DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIK-------- 215

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPF-----EGMSNLQAAYAAAFKHAR-------PGLP 109
                K DVYSFG+VL+E+L  R          M NL A +A    +         P L 
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL-AEWAVESHNNGQLEQIVDPNLA 274

Query: 110 EDISPDLAF----IVQSCWVEDPNLRPSFSQIIRML 141
           + I P+           C       RPS   ++  L
Sbjct: 275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 79.1 bits (196), Expect = 4e-18
 Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 27/140 (19%)

Query: 20  KLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV 76
           K++DFGLAR   +   T M +   GT  +MAPE         G       K D+YSFG+V
Sbjct: 173 KISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALR-----G---EITPKSDIYSFGVV 223

Query: 77  LWELLTNRLPFE---GMSNLQAAYAAAFKHARPGLPEDISPDL-----------AFIVQS 122
           L E++T     +       L        +     + + I   +             +   
Sbjct: 224 LLEIITGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQ 282

Query: 123 CWVEDPNLRPSFSQIIRMLN 142
           C  E  N RP   ++ ++L 
Sbjct: 283 CLHEKKNKRPDIKKVQQLLQ 302

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 78.8 bits (195), Expect = 6e-18
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 33/163 (20%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N+L++ D     L DFG+A    +E +T++     GT  +MAPE        +  +
Sbjct: 160 VKPENILVSADDF-AYLVDFGIASATTDEKLTQLGNT-VGTLYYMAPE--------RFSE 209

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH----------ARPGLPED 111
            H   + D+Y+   VL+E LT   P++G        +    H           RPG+P  
Sbjct: 210 SHATYRADIYALTCVLYECLTGSPPYQGDQ-----LSVMGAHINQAIPRPSTVRPGIP-- 262

Query: 112 ISPDLAFIVQSCWVEDPNLR-PSFSQIIRMLNAFLFTLRPPSP 153
                  ++     ++P  R  +   +    +A L T      
Sbjct: 263 --VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDRA 303

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 80.1 bits (197), Expect = 6e-18
 Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 5   MKEDNLLL--TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N++L   P +   K+ D G A+E    E+ T   GT +++APEL         E+K
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL--------EQK 198

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN--LQAAYAAAFKHARPGLPEDISPDLAFIV 120
            Y   VD +SFG + +E +T   PF                 +    + +D++  + F  
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKF-- 256

Query: 121 QSCWVEDPNLRPSFSQI 137
            S  +  PN        
Sbjct: 257 -SSVLPTPNHLSGILAG 272

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 78.2 bits (193), Expect = 1e-17
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 9/137 (6%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+LLT +   +KL DFG++ +   T +    T  GT  WMAPE+   +   +     
Sbjct: 156 KGQNVLLT-ENAEVKLVDFGVSAQLDRT-VGRRNTFIGTPYWMAPEV---IACDENPDAT 210

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQS 122
           Y+ K D++S GI   E+     P   M  ++A +    ++  P L  +  S      ++S
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-RNPAPRLKSKKWSKKFQSFIES 269

Query: 123 CWVEDPNLRPSFSQIIR 139
           C V++ + RP+  Q+++
Sbjct: 270 CLVKNHSQRPATEQLMK 286

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 77.7 bits (192), Expect = 1e-17
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 13/130 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+LL+ +   +KLADFG+A + T T  +   T  GT  WMAPE    V  +      
Sbjct: 146 KAANVLLS-EHGEVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPE----VIKQSA---- 195

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y++K D++S GI   EL     P   +  ++  +    K+  P L  + S  L   V++C
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEAC 254

Query: 124 WVEDPNLRPS 133
             ++P+ RP+
Sbjct: 255 LNKEPSFRPT 264

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 16/137 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL    + LK+ADFG +               GT  ++ PE+         E +
Sbjct: 135 IKPENLLLGSAGE-LKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMI--------EGR 182

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            ++ KVD++S G++ +E L  + PFE  +  Q  Y    +      P+ ++     ++  
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISR-VEFTFPDFVTEGARDLISR 240

Query: 123 CWVEDPNLRPSFSQIIR 139
               +P+ RP   +++ 
Sbjct: 241 LLKHNPSQRPMLREVLE 257

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 77.9 bits (192), Expect = 3e-17
 Identities = 27/154 (17%), Positives = 59/154 (38%), Gaps = 22/154 (14%)

Query: 5   MKEDNLLLTPDQKS------------LKLADFGLAR-----EETVTEMMTAETGTYRWMA 47
           +K  N+L++   +             + ++DFGL +     + +    +   +GT  W A
Sbjct: 141 LKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRA 200

Query: 48  PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAA---FKH 103
           PEL       Q  K+     +D++S G V + +L+  + PF    + ++           
Sbjct: 201 PELLEESNNLQT-KRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE 259

Query: 104 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 137
            +      +  +   ++      DP  RP+  ++
Sbjct: 260 MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 77.0 bits (190), Expect = 3e-17
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 9/132 (6%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV 68
           N+LL     ++KL DFG++ +   +   T + G   +MAPE           ++ Y+ + 
Sbjct: 156 NILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE----RIDPSASRQGYDVRS 210

Query: 69  DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI----SPDLAFIVQSCW 124
           DV+S GI L+EL T R P+   +++        K   P L        SP     V  C 
Sbjct: 211 DVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCL 270

Query: 125 VEDPNLRPSFSQ 136
            +D + RP + +
Sbjct: 271 TKDESKRPKYKE 282

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 76.6 bits (189), Expect = 3e-17
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K DN+LL     S+KL DFG   + T        T  GT  WMAPE+ +        +K 
Sbjct: 143 KSDNILLG-MDGSVKLTDFGFCAQITPE-QSKRSTMVGTPYWMAPEVVT--------RKA 192

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  KVD++S GI+  E++    P+   + L+A Y  A  +  P L  PE +S      + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLN 251

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            C   D   R S  ++++  + FL   +P S   P
Sbjct: 252 RCLEMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 76.6 bits (189), Expect = 4e-17
 Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 18/135 (13%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K++N+L+  ++  LKL DFG       T     + GT  +  PE              Y+
Sbjct: 176 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIR--------YHRYH 226

Query: 66  -NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
                V+S GI+L++++   +PFE    +           +    + +S +   +++ C 
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHDEEI--------IRGQVFFRQRVSSECQHLIRWCL 278

Query: 125 VEDPNLRPSFSQIIR 139
              P+ RP+F +I  
Sbjct: 279 ALRPSDRPTFEEIQN 293

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 77.6 bits (191), Expect = 4e-17
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 25/154 (16%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N++LT +Q  LKL D G          +    GT  + APE+  T           
Sbjct: 208 LKPENIMLTEEQ--LKLIDLGAVSRINSFGYLY---GTPGFQAPEIVRT---------GP 253

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE-DISPDLAFIVQSC 123
               D+Y+ G  L  L  +     G                   P          +++  
Sbjct: 254 TVATDIYTVGRTLAALTLDLPTRNG---------RYVDGLPEDDPVLKTYDSYGRLLRRA 304

Query: 124 WVEDPNLRP-SFSQIIRMLNAFLFTLRPPSPSVP 156
              DP  R  +  ++   L   L  +      VP
Sbjct: 305 IDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVP 338

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 76.1 bits (188), Expect = 6e-17
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 12/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLA-REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  +   +K+ DFGLA + E   E      GT  ++APE+ S        KK 
Sbjct: 141 LKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--------KKG 191

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K     +P+ I+P  A ++Q  
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFET-SCLKETYLRI-KKNEYSIPKHINPVAASLIQKM 249

Query: 124 WVEDPNLRPSFSQIIR 139
              DP  RP+ ++++ 
Sbjct: 250 LQTDPTARPTINELLN 265

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 76.7 bits (189), Expect = 6e-17
 Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 26/149 (17%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV 68
           N+L+  +   +KL+DFG +      ++  +  GTY +M PE +S       E  +   KV
Sbjct: 182 NILMDKN-GRVKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFS------NESSYNGAKV 233

Query: 69  DVYSFGIVLWELLTNRLPFEGMSNLQAAY------------------AAAFKHARPGLPE 110
           D++S GI L+ +  N +PF    +L   +                               
Sbjct: 234 DIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNN 293

Query: 111 DISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
            +S +    ++    ++P  R +    ++
Sbjct: 294 FLSNEDIDFLKLFLRKNPAERITSEDALK 322

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 76.2 bits (188), Expect = 6e-17
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 15/161 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K +NLLL     ++K+ADFG + E TV   + A  G   + APEL+          K Y+
Sbjct: 141 KAENLLLD-ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQ--------GKKYD 191

Query: 66  -NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S G++L+ L++  LPF+G  NL+          +  +P  +S D   +++   
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR-ERVLRGKYRIPFYMSTDCENLLKRFL 249

Query: 125 VEDPNLRPSFSQIIR---MLNAFLFTLRPPSPSVPESDTNE 162
           V +P  R +  QI++   +          P        +++
Sbjct: 250 VLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQ 290

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 75.7 bits (187), Expect = 6e-17
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 15/153 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K +N+LL     + K+ADFGL+   +  E +    G+  + APE+ S         + Y 
Sbjct: 138 KPENVLLD-AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS--------GRLYA 188

Query: 66  -NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VD++S G++L+ LL   LPF+   ++   +          +PE ++  +A ++    
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRG-GVFYIPEYLNRSVATLLMHML 246

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 157
             DP  R +   I        F    PS   PE
Sbjct: 247 QVDPLKRATIKDIREHE---WFKQDLPSYLFPE 276

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 75.3 bits (186), Expect = 7e-17
 Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 20/140 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLA-REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +   NLLLT    ++K+ADFGLA + +   E      GT  +++PE+ +        +  
Sbjct: 138 LTLSNLLLT-RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT--------RSA 188

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY----AAAFKHARPGLPEDISPDLAFI 119
           +  + DV+S G + + LL  R PF+    ++        A ++     +P  +S +   +
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDT-DTVKNTLNKVVLADYE-----MPSFLSIEAKDL 242

Query: 120 VQSCWVEDPNLRPSFSQIIR 139
           +      +P  R S S ++ 
Sbjct: 243 IHQLLRRNPADRLSLSSVLD 262

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 75.8 bits (187), Expect = 8e-17
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 14/162 (8%)

Query: 6   KEDNLLLTPDQKSLKLADFGLA---REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           K  NLLLT    +LK++  G+A         +      G+  +  PE+ +      G   
Sbjct: 136 KPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN------GLDT 188

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
               KVD++S G+ L+ + T   PFEG  N+   +    K     +P D  P L+ +++ 
Sbjct: 189 FSGFKVDIWSAGVTLYNITTGLYPFEG-DNIYKLFENIGK-GSYAIPGDCGPPLSDLLKG 246

Query: 123 CWVEDPNLRPSFSQIIRM--LNAFLFTLRPPSPSVPESDTNE 162
               +P  R S  QI +             P P  P  DT +
Sbjct: 247 MLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKD 288

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K D++LLT     +KL+DFG   + +   +   ++  GT  WMAPE+ S        +  
Sbjct: 168 KSDSILLT-LDGRVKLSDFGFCAQISKD-VPKRKSLVGTPYWMAPEVIS--------RSL 217

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           Y  +VD++S GI++ E++    P+   S +QA          P L     +SP L   ++
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR-DSPPPKLKNSHKVSPVLRDFLE 276

Query: 122 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
              V DP  R +  +++   + FL     P   VP
Sbjct: 277 RMLVRDPQERATAQELLD--HPFLLQTGLPECLVP 309

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 15/132 (11%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+LL   +   KLADFG+A + T T M    T  GT  WMAPE+          +  
Sbjct: 152 KAGNILLN-TEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQ--------EIG 201

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQ 121
           YN   D++S GI   E+   + P+  +  ++A +     +  P    PE  S +    V+
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIP-TNPPPTFRKPELWSDNFTDFVK 260

Query: 122 SCWVEDPNLRPS 133
            C V+ P  R +
Sbjct: 261 QCLVKSPEQRAT 272

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 75.4 bits (186), Expect = 1e-16
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 12/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLA-REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NL L  +   +K+ DFGLA + E   E      GT  ++APE+ S        KK 
Sbjct: 167 LKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--------KKG 217

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++ +VDV+S G +++ LL  + PFE  S L+  Y    K     +P+ I+P  A ++Q  
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFET-SCLKETYLRI-KKNEYSIPKHINPVAASLIQKM 275

Query: 124 WVEDPNLRPSFSQIIR 139
              DP  RP+ ++++ 
Sbjct: 276 LQTDPTARPTINELLN 291

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 75.3 bits (185), Expect = 2e-16
 Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 16/143 (11%)

Query: 6   KEDNLLLTPDQKS-LKLADFGLAR-----EETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           K +N L + ++   +KL DFGL++            MT + GT  ++APE+     L   
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV-----LN-T 248

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISPDL 116
             + Y  K D +S G++L  LL   +PF G+++   +            P     +SP  
Sbjct: 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYN-VLSPLA 307

Query: 117 AFIVQSCWVEDPNLRPSFSQIIR 139
             ++ +    + + R    + ++
Sbjct: 308 RDLLSNLLNRNVDERFDAMRALQ 330

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 11/130 (8%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           MK DN+LL  D+   + + DF +A        +T   GT  +MAPE+         +   
Sbjct: 141 MKPDNILL--DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEM-----FSSRKGAG 193

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMS--NLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
           Y+  VD +S G+  +ELL  R P+   S  + +      F+      P   S ++  +++
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV-HTFETTVVTYPSAWSQEMVSLLK 252

Query: 122 SCWVEDPNLR 131
                +P+ R
Sbjct: 253 KLLEPNPDQR 262

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 74.3 bits (183), Expect = 3e-16
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 18/135 (13%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K++N+L+   +   KL DFG             + GT  +  PE  S        +  Y+
Sbjct: 166 KDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD-GTRVYSPPEWIS--------RHQYH 216

Query: 66  -NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
                V+S GI+L++++   +PFE    +          A    P  +SPD   +++ C 
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPFERDQEI--------LEAELHFPAHVSPDCCALIRRCL 268

Query: 125 VEDPNLRPSFSQIIR 139
              P+ RPS  +I+ 
Sbjct: 269 APKPSSRPSLEEILL 283

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 74.2 bits (183), Expect = 3e-16
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K +NLLL  D  ++K+ADFGL+   T    +    G+  + APE+ +         K Y 
Sbjct: 135 KPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN--------GKLYA 185

Query: 66  -NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VDV+S GIVL+ +L  RLPF+    +   +          +P+ +SP    +++   
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKV-NSCVYVMPDFLSPGAQSLIRRMI 243

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNE 162
           V DP  R +  +I R      F +  P    P  +   
Sbjct: 244 VADPMQRITIQEIRRDP---WFNVNLPDYLRPMEEVQG 278

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 73.4 bits (181), Expect = 4e-16
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 12/134 (8%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K +NLL+   +  LK+ADFG +         T   GT  ++ PE+         E K ++
Sbjct: 141 KPENLLMG-YKGELKIADFGWSVHAPSLRRRTM-CGTLDYLPPEMI--------EGKTHD 190

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWV 125
            KVD++  G++ +E L    PF+   +    +           P  +S     ++     
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDS-PSHTETHRRIVN-VDLKFPPFLSDGSKDLISKLLR 248

Query: 126 EDPNLRPSFSQIIR 139
             P  R     ++ 
Sbjct: 249 YHPPQRLPLKGVME 262

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 74.3 bits (183), Expect = 4e-16
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 18/143 (12%)

Query: 6   KEDNLLLTPDQK--SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           K +N+LL+  ++   +K+ DFG ++    T +M    GT  ++APE+     L       
Sbjct: 266 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV-----LVSVGTAG 320

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE----DISP---DL 116
           YN  VD +S G++L+  L+   PF      Q +        +         ++S    DL
Sbjct: 321 YNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 379

Query: 117 AFIVQSCWVEDPNLRPSFSQIIR 139
              V+   V DP  R +  + +R
Sbjct: 380 ---VKKLLVVDPKARFTTEEALR 399

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 74.4 bits (183), Expect = 5e-16
 Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 15/138 (10%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL + ++ + +K+ DFGL+      + M    GT  ++APE+          +K
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL---------RK 212

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISPDLAFI 119
            Y+ K DV+S G++L+ LL    PF G ++   L+      +    P    ++S     +
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK-NVSEGAKDL 271

Query: 120 VQSCWVEDPNLRPSFSQI 137
           ++     D   R S  Q 
Sbjct: 272 IKQMLQFDSQRRISAQQA 289

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 74.0 bits (182), Expect = 7e-16
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL +  + + +++ DFGL+     ++ M  + GT  ++APE+            
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL---------HG 202

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISPDLAFI 119
            Y+ K DV+S G++L+ LL+   PF G +    L+      +    P     +S     +
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK-KVSESAKDL 261

Query: 120 VQSCWVEDPNLRPSFSQI 137
           ++      P++R S    
Sbjct: 262 IRKMLTYVPSMRISARDA 279

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 73.6 bits (181), Expect = 9e-16
 Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 24/203 (11%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL + ++   +K+ DFGL+        M    GT  ++APE+          + 
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---------RG 197

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISPDLAFI 119
            Y+ K DV+S G++L+ LL+   PF G +    L+      +    P     IS D   +
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR-TISDDAKDL 256

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSARAR 179
           ++      P+LR + +Q +   + ++      +P++ +  + E+A T+   + +F A  +
Sbjct: 257 IRKMLTFHPSLRITATQCLE--HPWIQKYSSETPTISDLPSLESAMTN---IRQFQAEKK 311

Query: 180 GKFAFLR----QLFTAKRTKNLQ 198
              A L     +L T   TK L 
Sbjct: 312 LAQAALLYMASKLTTLDETKQLT 334

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 72.8 bits (179), Expect = 1e-15
 Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 15/131 (11%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKKH 63
           K  N+LL+ +   +KL DFG A     + M  A +  GT  WMAPE+     +   ++  
Sbjct: 181 KAGNILLS-EPGLVKLGDFGSA-----SIMAPANSFVGTPYWMAPEV-----ILAMDEGQ 229

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQS 122
           Y+ KVDV+S GI   EL   + P   M+ + A Y  A ++  P L     S      V S
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPALQSGHWSEYFRNFVDS 288

Query: 123 CWVEDPNLRPS 133
           C  + P  RP+
Sbjct: 289 CLQKIPQDRPT 299

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 13/132 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   + L DFGL++E    E   A    GT  +MAP++       +G   
Sbjct: 185 IKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV------RGGDS 237

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK---HARPGLPEDISPDLAFI 119
            ++  VD +S G++++ELLT   PF      + + A   +    + P  P+++S     +
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGASPFTV-DGEKNSQAEISRRILKSEPPYPQEMSALAKDL 296

Query: 120 VQSCWVEDPNLR 131
           +Q   ++DP  R
Sbjct: 297 IQRLLMKDPKKR 308

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 15/138 (10%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL   +    +K+ DFGL+   +    +    GT  ++APE+          KK
Sbjct: 172 IKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL---------KK 222

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISPDLAFI 119
            YN K DV+S G++++ LL    PF G ++   ++      +         +IS +   +
Sbjct: 223 KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK-NISDEAKEL 281

Query: 120 VQSCWVEDPNLRPSFSQI 137
           ++     D N R +  + 
Sbjct: 282 IKLMLTYDYNKRCTAEEA 299

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 71.1 bits (175), Expect = 3e-15
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 22/141 (15%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N+L       S +K+ DFGLA      E  T   GT  +MAPE++         K+
Sbjct: 150 LKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF---------KR 200

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISP---DL 116
               K D++S G+V++ LLT  LPF G S     Q A      +A       ++P   DL
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE--CRPLTPQAVDL 258

Query: 117 AFIVQSCWVEDPNLRPSFSQI 137
              ++    +DP  RPS +Q+
Sbjct: 259 ---LKQMLTKDPERRPSAAQV 276

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 71.5 bits (176), Expect = 3e-15
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 28/156 (17%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  N+LL  + ++  + DFGLA+  +   T + TA  GT   +APE  ST     G   
Sbjct: 160 VKAANILLDEEFEA-VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-----G--- 210

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-----GLPEDISPDL- 116
             + K DV+ +G++L EL+T +  F+                +       L   +  DL 
Sbjct: 211 KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ 270

Query: 117 -----------AFIVQSCWVEDPNLRPSFSQIIRML 141
                        +   C    P  RP  S+++RML
Sbjct: 271 GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 71.2 bits (175), Expect = 4e-15
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 6   KEDNLLLTPDQKSLKLADFG----LAREETVTEMMTAET--GTYRWMAPELYSTVTLRQG 59
           K  N+LL  +  S+++ADFG    LA    +T     +T  GT  WMAPE+         
Sbjct: 148 KAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME------- 199

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI------- 112
           + + Y+ K D++SFGI   EL T   P+     ++       ++  P L   +       
Sbjct: 200 QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL-QNDPPSLETGVQDKEMLK 258

Query: 113 --SPDLAFIVQSCWVEDPNLRPS 133
                   ++  C  +DP  RP+
Sbjct: 259 KYGKSFRKMISLCLQKDPEKRPT 281

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 71.0 bits (174), Expect = 7e-15
 Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 15/161 (9%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K +N+LL     + K+ADFGL+   +  E +    G+  + APE+ S         + Y 
Sbjct: 143 KPENVLLD-AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS--------GRLYA 193

Query: 66  -NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +VD++S G++L+ LL   LPF+   ++   +           P+ ++P +  +++   
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKI-CDGIFYTPQYLNPSVISLLKHML 251

Query: 125 VEDPNLRPSFSQIIR---MLNAFLFTLRPPSPSVPESDTNE 162
             DP  R +   I             L P  PS   +  ++
Sbjct: 252 QVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDD 292

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 70.0 bits (172), Expect = 1e-14
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 18/143 (12%)

Query: 6   KEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           K +N+LL + ++   +K+ DFG ++    T +M    GT  ++APE+     L       
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV-----LVSVGTAG 195

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE----DISP---DL 116
           YN  VD +S G++L+  L+   PF      Q +        +         ++S    DL
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 254

Query: 117 AFIVQSCWVEDPNLRPSFSQIIR 139
              V+   V DP  R +  + +R
Sbjct: 255 ---VKKLLVVDPKARFTTEEALR 274

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 68.0 bits (167), Expect = 3e-14
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 14/139 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLA---REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           K +NLLL  ++ +LK++DFGLA   R      ++    GT  ++APEL          ++
Sbjct: 132 KPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK--------RR 182

Query: 63  HYN-NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP-EDISPDLAFIV 120
            ++   VDV+S GIVL  +L   LP++  S+    Y+   +      P + I      ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242

Query: 121 QSCWVEDPNLRPSFSQIIR 139
               VE+P+ R +   I +
Sbjct: 243 HKILVENPSARITIPDIKK 261

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 68.2 bits (167), Expect = 4e-14
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 18/135 (13%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K++N+++  +  ++KL DFG A      ++     GT  + APE+             Y 
Sbjct: 157 KDENIVIA-EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLM--------GNPYR 207

Query: 66  -NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
             +++++S G+ L+ L+    PF     L+    AA        P  +S +L  +V    
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPFC---ELEETVEAAIH-----PPYLVSKELMSLVSGLL 259

Query: 125 VEDPNLRPSFSQIIR 139
              P  R +  +++ 
Sbjct: 260 QPVPERRTTLEKLVT 274

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 68.0 bits (166), Expect = 6e-14
 Identities = 39/223 (17%), Positives = 66/223 (29%), Gaps = 68/223 (30%)

Query: 6   KEDNLLLTPDQKSLKLADFGLA--------REETVTEMMTAETGTYRWMAPELYSTVTLR 57
           K  ++L++     + L+             R+  V +          W++PE+     L+
Sbjct: 155 KASHILIS-VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV-----LQ 208

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA---------------------- 95
           Q   + Y+ K D+YS GI   EL    +PF+ M   Q                       
Sbjct: 209 Q-NLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 267

Query: 96  ----------------------AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS 133
                                    +             SP     V+ C   +P+ RPS
Sbjct: 268 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327

Query: 134 ---------FSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATS 167
                    F QI R  +  L  L  P   +   + +++   S
Sbjct: 328 ASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHS 370

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 67.7 bits (166), Expect = 7e-14
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 17/167 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLA---REETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           K +NLLL  ++ +LK++DFGLA   R      ++    GT  ++APEL          ++
Sbjct: 132 KPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK--------RR 182

Query: 63  HYN-NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP-EDISPDLAFIV 120
            ++   VDV+S GIVL  +L   LP++  S+    Y+   +      P + I      ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242

Query: 121 QSCWVEDPNLRPSFSQIIR---MLNAFLFTLRPPSPSVPESDTNEAA 164
               VE+P+ R +   I +            + P  +      + + 
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSG 289

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 66.8 bits (164), Expect = 8e-14
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 23/142 (16%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N L  T    S LKL DFGLA      +MM  + GT  +++P++          + 
Sbjct: 132 LKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL---------EG 182

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISP---D 115
            Y  + D +S G++++ LL    PF              +      PE     +SP    
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPFSA-PTDSEVMLKI-REGTFTFPEKDWLNVSPQAES 240

Query: 116 LAFIVQSCWVEDPNLRPSFSQI 137
           L   ++    + P  R +  Q 
Sbjct: 241 L---IRRLLTKSPKQRITSLQA 259

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 67.6 bits (166), Expect = 8e-14
 Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   +KL DFGL++E  +     A +  GT  +MAPE    V  R+G   
Sbjct: 152 LKPENILLDEE-GHIKLTDFGLSKES-IDHEKKAYSFCGTVEYMAPE----VVNRRG--- 202

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            +    D +SFG++++E+LT  LPF+G  + +         A+ G+P+ +SP+   +++ 
Sbjct: 203 -HTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETM-TMILKAKLGMPQFLSPEAQSLLRM 259

Query: 123 CWVEDPNLR 131
            +  +P  R
Sbjct: 260 LFKRNPANR 268

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAE--TGTYRWMAPELYSTVTLRQGEKK 62
           +K  NLLL P    LKL DFG A+     E   +   +  YR  APEL    T       
Sbjct: 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYR--APELIFGAT------- 217

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           +Y   +D++S G V+ EL+  +  F G S + 
Sbjct: 218 NYTTNIDIWSTGCVMAELMQGQPLFPGESGID 249

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 6   KEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           K +N LL       LK+ DFG ++   +     +  GT  ++APE+          ++ Y
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--------RQEY 194

Query: 65  N-NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPED--ISPDLAF 118
           +    DV+S G+ L+ +L    PFE        Y    +        +P+D  ISP+   
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFED-PEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253

Query: 119 IVQSCWVEDPNLRPSFSQIIR---MLNAFLFTLRPPSPSVPESDTNEAAATS 167
           ++   +V DP  R S  +I      L      L   S +  +    E    S
Sbjct: 254 LISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQS 305

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 66.9 bits (164), Expect = 1e-13
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL  +    KLADFG+ +E  +   +T  T  GT  ++APE    +        
Sbjct: 150 LKLDNVLLDHE-GHCKLADFGMCKEG-ICNGVTTATFCGTPDYIAPE----ILQEML--- 200

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD ++ G++L+E+L    PFE   N    +  A  +     P  +  D   I++S
Sbjct: 201 -YGPAVDWWAMGVLLYEMLCGHAPFEA-ENEDDLF-EAILNDEVVYPTWLHEDATGILKS 257

Query: 123 CWVEDPNLR 131
              ++P +R
Sbjct: 258 FMTKNPTMR 266

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKK 62
           +K  NLLL PD   LKL DFG A++    E   +   +  YR  APEL    T       
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT------- 232

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
            Y + +DV+S G VL ELL  +  F G S + 
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 19/136 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL  +   +KL D+G+ +E  +    T  T  GT  ++APE    +   +    
Sbjct: 179 LKLDNVLLDSE-GHIKLTDYGMCKEG-LRPGDTTSTFCGTPNYIAPE----ILRGED--- 229

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA-------AAFKHARPGLPEDISPD 115
            Y   VD ++ G++++E++  R PF+ + +                   +  +P  +S  
Sbjct: 230 -YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK 288

Query: 116 LAFIVQSCWVEDPNLR 131
            A +++S   +DP  R
Sbjct: 289 AASVLKSFLNKDPKER 304

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWM-APELYSTVTLRQGEKKH 63
           +K  N+++  + + L+L D+GLA      +       + R+   PEL           + 
Sbjct: 156 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS-RYFKGPELLVDY-------QM 207

Query: 64  YNNKVDVYSFGIVLWELLTNRLP-FEGMSNLQ 94
           Y+  +D++S G +L  ++  + P F G  N  
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 239

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 19/136 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL  +   +KL D+G+ +E  +    T  T  GT  ++APE    +   +    
Sbjct: 136 LKLDNVLLDSE-GHIKLTDYGMCKEG-LRPGDTTSTFCGTPNYIAPE----ILRGED--- 186

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA-------AAFKHARPGLPEDISPD 115
            Y   VD ++ G++++E++  R PF+ + +                   +  +P  +S  
Sbjct: 187 -YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK 245

Query: 116 LAFIVQSCWVEDPNLR 131
            A +++S   +DP  R
Sbjct: 246 AASVLKSFLNKDPKER 261

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 66.4 bits (163), Expect = 2e-13
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N++L      +KL DFGL +E  + +     T  GT  +MAPE    + +R G   
Sbjct: 147 LKPENIMLNHQ-GHVKLTDFGLCKES-IHDGTVTHTFCGTIEYMAPE----ILMRSG--- 197

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            +N  VD +S G +++++LT   PF G  N +          +  LP  ++ +   +++ 
Sbjct: 198 -HNRAVDWWSLGALMYDMLTGAPPFTG-ENRKKTI-DKILKCKLNLPPYLTQEARDLLKK 254

Query: 123 CWVEDPNLR 131
               +   R
Sbjct: 255 LLKRNAASR 263

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 67.0 bits (163), Expect = 2e-13
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN++L  +   +K+ADFG+ +E  + + +T +T  GT  ++APE    +   Q    
Sbjct: 468 LKLDNVMLDSE-GHIKIADFGMCKEN-IWDGVTTKTFCGTPDYIAPE----IIAYQP--- 518

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD ++FG++L+E+L  + PFEG  +    +  +        P+ +S +   I + 
Sbjct: 519 -YGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELF-QSIMEHNVAYPKSMSKEAVAICKG 575

Query: 123 CWVEDPNLR 131
              + P  R
Sbjct: 576 LMTKHPGKR 584

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +NL+L  D   +K+ DFGL +E  +++  T +T  GT  ++APE    V        
Sbjct: 131 IKLENLMLDKD-GHIKITDFGLCKEG-ISDGATMKTFCGTPEYLAPE----VLEDND--- 181

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD +  G+V++E++  RLPF    + +  +           P  +SP+   ++  
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF-ELILMEEIRFPRTLSPEAKSLLAG 238

Query: 123 CWVEDPNLR 131
              +DP  R
Sbjct: 239 LLKKDPKQR 247

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 31/203 (15%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL +  + + +KLADFGLA E   +E      GT  +++PE+     L+   K 
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-----LK---KD 205

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISP---D 115
            Y+  VD+++ G++L+ LL    PF      Q    A  K      P      ++P    
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYAQIKAGAYDYPSPEWDTVTPEAKS 263

Query: 116 LAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFS 175
           L   + S    +P  R +  Q    L       R    S                + +F+
Sbjct: 264 L---IDSMLTVNPKKRITADQA---LKVPWICNRERVASAIHRQDTVD------CLKKFN 311

Query: 176 ARARGKFAFLRQLFTAKRTKNLQ 198
           AR + K A L  +   +   NL 
Sbjct: 312 ARRKLKGAILTTMIATRNLSNLG 334

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL  D   +K+ADFG+ +E  +       T  GT  ++APE+           +
Sbjct: 144 LKLDNILLDKD-GHIKIADFGMCKEN-MLGDAKTNTFCGTPDYIAPEIL--------LGQ 193

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            YN+ VD +SFG++L+E+L  + PF G  + +  +  + +   P  P  +  +   ++  
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELF-HSIRMDNPFYPRWLEKEAKDLLVK 251

Query: 123 CWVEDPNLR 131
            +V +P  R
Sbjct: 252 LFVREPEKR 260

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 65.7 bits (161), Expect = 3e-13
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 23/142 (16%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL + ++   +K+ DFGL+        M    GT  ++APE+          + 
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---------RG 197

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISP---D 115
            Y+ K DV+S G++L+ LL+   PF G +  +       +  +          IS    D
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKRVETGKYAFDLPQWRTISDDAKD 255

Query: 116 LAFIVQSCWVEDPNLRPSFSQI 137
           L   ++      P+LR + +Q 
Sbjct: 256 L---IRKMLTFHPSLRITATQC 274

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL      + L DFGL +E  +    T  T  GT  ++APE    V  +Q    
Sbjct: 165 LKPENILLDSQ-GHIVLTDFGLCKEN-IEHNSTTSTFCGTPEYLAPE----VLHKQP--- 215

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y+  VD +  G VL+E+L    PF    N    Y     +    L  +I+     +++ 
Sbjct: 216 -YDRTVDWWCLGAVLYEMLYGLPPFYS-RNTAEMY-DNILNKPLQLKPNITNSARHLLEG 272

Query: 123 CWVEDPNLR 131
              +D   R
Sbjct: 273 LLQKDRTKR 281

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 65.9 bits (161), Expect = 4e-13
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +NL+L  D   +K+ DFGL +E  + +  T +T  GT  ++APE+         E  
Sbjct: 275 LKLENLMLDKD-GHIKITDFGLCKEG-IKDGATMKTFCGTPEYLAPEVL--------EDN 324

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD +  G+V++E++  RLPF    + +  +           P  + P+   ++  
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLF-ELILMEEIRFPRTLGPEAKSLLSG 382

Query: 123 CWVEDPNLR 131
              +DP  R
Sbjct: 383 LLKKDPKQR 391

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 65.9 bits (161), Expect = 4e-13
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKKH 63
           K  NLL+     +LKL DFG A++   +E   A   +  YR  APEL    T        
Sbjct: 168 KPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYR--APELMLGAT-------E 218

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           Y   +D++S G V  EL+  +  F G +++ 
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFSGETSID 249

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 65.9 bits (161), Expect = 4e-13
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 13/118 (11%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEK 61
           +K DN+L+  D    ++LADFG   +      + +    GT  +++PE+   +   +G K
Sbjct: 201 IKPDNILM--DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI---LQAMEGGK 255

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH----ARPGLPEDISPD 115
             Y  + D +S G+ ++E+L    PF    +L   Y     H      P    D+S +
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYA-ESLVETYGKIMNHKERFQFPTQVTDVSEN 312

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 65.3 bits (160), Expect = 6e-13
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 14/129 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN++L  +   +K+ADFG+ +E  + + +T +T  GT  ++APE    +   Q    
Sbjct: 147 LKLDNVMLDSE-GHIKIADFGMCKEN-IWDGVTTKTFCGTPDYIAPE----IIAYQP--- 197

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y   VD ++FG++L+E+L  + PFEG  +    +  +        P+ +S +   I + 
Sbjct: 198 -YGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELF-QSIMEHNVAYPKSMSKEAVAICKG 254

Query: 123 CWVEDPNLR 131
              + P  R
Sbjct: 255 LMTKHPGKR 263

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 65.5 bits (160), Expect = 6e-13
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 9/117 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K DN+LL      ++LADFG   +      + +    GT  +++PE+   V    G   
Sbjct: 188 IKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR----PGLPEDISPD 115
            Y  + D ++ G+  +E+   + PF    +    Y     +      P + E +  +
Sbjct: 247 -YGPECDWWALGVFAYEMFYGQTPFYA-DSTAETYGKIVHYKEHLSLPLVDEGVPEE 301

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 65.0 bits (158), Expect = 7e-13
 Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 21/111 (18%)

Query: 5   MKEDNLLLTP----------DQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELY 51
           +K DN +L                L L D G + +  +     + TA+  T  +   E+ 
Sbjct: 198 IKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML 257

Query: 52  STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 102
                     K +N ++D +     ++ +L            +      F+
Sbjct: 258 --------SNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR 300

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 65.0 bits (159), Expect = 7e-13
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKKHYNN 66
           N+L+     +LKL DFG A++ + +E   A   +  YR  APEL            HY  
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYR--APELIFGNQ-------HYTT 211

Query: 67  KVDVYSFGIVLWELLTNRLPFEGMSNL 93
            VD++S G +  E++     F G ++ 
Sbjct: 212 AVDIWSVGCIFAEMMLGEPIFRGDNSA 238

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 64.3 bits (157), Expect = 1e-12
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 21/144 (14%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLL  TP   + LK+ADFGL++      +M    GT  + APE+     LR     
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI-----LR---GC 225

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE----DISP---D 115
            Y  +VD++S GI+ + LL    PF      Q  +     +           ++S    D
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF-RRILNCEYYFISPWWDEVSLNAKD 284

Query: 116 LAFIVQSCWVEDPNLRPSFSQIIR 139
           L   V+   V DP  R +  Q ++
Sbjct: 285 L---VRKLIVLDPKKRLTTFQALQ 305

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 64.0 bits (156), Expect = 2e-12
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 13/130 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D   ++++D GLA      + +    GT  +MAPE+         + + Y
Sbjct: 312 LKPENILL-DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV--------KNERY 362

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK---HARPGLPEDISPDLAFIVQ 121
               D ++ G +L+E++  + PF+     +       +          E  SP    +  
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421

Query: 122 SCWVEDPNLR 131
               +DP  R
Sbjct: 422 QLLCKDPAER 431

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 63.3 bits (154), Expect = 3e-12
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  D  +++++D GLA E         +   GT  +MAPEL           +
Sbjct: 315 LKPENVLLD-DDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELL--------LGE 364

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK---HARPGLPEDISPDLAFI 119
            Y+  VD ++ G+ L+E++  R PF      +       +         P+  SP     
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRA-RGEKVENKELKQRVLEQAVTYPDKFSPASKDF 423

Query: 120 VQSCWVEDPNLR 131
            ++   +DP  R
Sbjct: 424 CEALLQKDPEKR 435

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 62.6 bits (153), Expect = 3e-12
 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 22/142 (15%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLLL +  + + +KLADFGLA E   +E      GT  +++PE+     L+   K 
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-----LK---KD 182

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISP---D 115
            Y+  VD+++ G++L+ LL    PF      Q    A  K      P      ++P    
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240

Query: 116 LAFIVQSCWVEDPNLRPSFSQI 137
           L   + S    +P  R +  Q 
Sbjct: 241 L---IDSMLTVNPKKRITADQA 259

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 61.9 bits (151), Expect = 7e-12
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 15/139 (10%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYN 65
           K +N+LL  D  ++KL DFG + +    E +    GT  ++APE+             Y 
Sbjct: 151 KPENILLDDD-MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM--NDNHPGYG 207

Query: 66  NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE----DISP---DLAF 118
            +VD++S G++++ LL    PF      Q                    D S    DL  
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPPFWHRK--QMLMLRMIMSGNYQFGSPEWDDYSDTVKDL-- 263

Query: 119 IVQSCWVEDPNLRPSFSQI 137
            V    V  P  R +  + 
Sbjct: 264 -VSRFLVVQPQKRYTAEEA 281

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 62.0 bits (151), Expect = 9e-12
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 10/96 (10%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEK 61
           +K DN+LL  D+   LKLADFG   +     M+  +T  GT  +++PE    V   QG  
Sbjct: 194 VKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE----VLKSQGGD 247

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 97
            +Y  + D +S G+ L+E+L    PF    +L   Y
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTY 282

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 61.2 bits (149), Expect = 1e-11
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 25/147 (17%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLL  + ++ + LKL DFG A+E T   + T    T  ++APE    V   +    
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-CYTPYYVAPE----VLGPEK--- 205

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE-------DISP- 114
            Y+   D++S G++++ LL    PF   +  QA      +  R G          ++S  
Sbjct: 206 -YDKSCDMWSLGVIMYILLCGFPPFYSNTG-QAISPGMKRRIRLGQYGFPNPEWSEVSED 263

Query: 115 --DLAFIVQSCWVEDPNLRPSFSQIIR 139
              L   ++     DP  R + +Q + 
Sbjct: 264 AKQL---IRLLLKTDPTERLTITQFMN 287

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 61.3 bits (149), Expect = 1e-11
 Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 17/141 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPE-LYSTVTLRQGEKKH 63
           +K +N+LL  +   ++L+DFG +      E +    GT  ++APE L  ++         
Sbjct: 226 LKPENILLDDN-MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETH---PG 281

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE----DISP---DL 116
           Y  +VD+++ G++L+ LL    PF      Q          +         D S    DL
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPPFWHRR--QILMLRMIMEGQYQFSSPEWDDRSSTVKDL 339

Query: 117 AFIVQSCWVEDPNLRPSFSQI 137
              +      DP  R +  Q 
Sbjct: 340 ---ISRLLQVDPEARLTAEQA 357

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 32/201 (15%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +NLLL +  + + +KLADFGLA E E   +      GT  +++PE+     LR   K
Sbjct: 136 LKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV-----LR---K 187

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISP--- 114
             Y   VD+++ G++L+ LL    PF      Q       K      P      ++P   
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQIKAGAYDFPSPEWDTVTPEAK 245

Query: 115 DLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEF 174
           DL   +      +P+ R + ++    L     + R    S                + +F
Sbjct: 246 DL---INKMLTINPSKRITAAEA---LKHPWISHRSTVASCMHRQETVD------CLKKF 293

Query: 175 SARARGKFAFLRQLFTAKRTK 195
           +AR + K A L  +   +   
Sbjct: 294 NARRKLKGAILTVMLATRNFS 314

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 60.2 bits (146), Expect = 3e-11
 Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 54/174 (31%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR-QGEKKHY 64
           K  N+L+   +  +KL DFG++ +   + M  +  GT  +M+PE       R QG   HY
Sbjct: 159 KPSNILVN-SRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-------RLQGT--HY 207

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR------------------- 105
           + + D++S G+ L E+   R P       +       +                      
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267

Query: 106 ----------------------PGLPEDI-SPDLAFIVQSCWVEDPNLRPSFSQ 136
                                 P LP  + S +    V  C +++P  R    Q
Sbjct: 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 321

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 60.0 bits (146), Expect = 4e-11
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 12/92 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKK 62
           +   N+LL  +   + + DF LARE+T     T       YR  APEL         + K
Sbjct: 160 LHPGNILLADNND-ITICDFNLAREDTADANKTHYVTHRWYR--APELV-------MQFK 209

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
            +   VD++S G V+ E+   +  F G +   
Sbjct: 210 GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 59.9 bits (145), Expect = 6e-11
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 12/129 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL  +   ++++D GLA + +  +   +  GT+ +MAPE+         +   Y
Sbjct: 318 LKPANILLD-EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ-------KGVAY 368

Query: 65  NNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
           ++  D +S G +L++LL    PF      +               LP+  SP+L  +++ 
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEG 427

Query: 123 CWVEDPNLR 131
               D N R
Sbjct: 428 LLQRDVNRR 436

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 58.8 bits (143), Expect = 7e-11
 Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 14/130 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAET--GTYRWMAPELYSTVTLRQGEK 61
           +K +N+LL  +   +++ DFG A+     ++   A +  GT ++++PEL          +
Sbjct: 156 LKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL--------TE 206

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
           K      D+++ G ++++L+    PF    N    +           PE   P    +V+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLIF-QKIIKLEYDFPEKFFPKARDLVE 264

Query: 122 SCWVEDPNLR 131
              V D   R
Sbjct: 265 KLLVLDATKR 274

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 59.1 bits (143), Expect = 9e-11
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 13/89 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKK 62
           +K  N+++  D   LK+ DFGLAR    + MMT    T  YR  APE+            
Sbjct: 190 LKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYR--APEVILG--------M 238

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMS 91
            Y   VD++S G ++ E++ +++ F G  
Sbjct: 239 GYKENVDIWSVGCIMGEMVRHKILFPGRD 267

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 19/139 (13%)

Query: 5   MKEDNLLL-TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N++  T    S+K+ DFGLA +    E++   T T  + APE+         +++ 
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV--------DREP 226

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISP---DLA 117
                D+++ G++ + LL+   PF G  +   LQ      ++         +SP   D  
Sbjct: 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS-SVSPEAKDF- 284

Query: 118 FIVQSCWVEDPNLRPSFSQ 136
             +++   ++P  R +   
Sbjct: 285 --IKNLLQKEPRKRLTVHD 301

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 17/138 (12%)

Query: 5   MKEDNLLL-TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+L    D K +K+ DFGLAR     E +    GT  ++APE+     +       
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV-----VNY---DF 264

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISPDLA--F 118
            +   D++S G++ + LL+   PF G ++   L    A  +         DIS + A  F
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQ-DIS-EEAKEF 322

Query: 119 IVQSCWVEDPNLRPSFSQ 136
           I     +++ + R S S+
Sbjct: 323 I-SKLLIKEKSWRISASE 339

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 15/96 (15%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGT--YRWMAPELYSTVTLRQ 58
           +K  NL +  +   LK+ DFGLAR      +    ++    T  YR  +P L        
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR--SPRLL------- 196

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
               +Y   +D+++ G +  E+LT +  F G   L+
Sbjct: 197 LSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 58.7 bits (142), Expect = 1e-10
 Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 21/140 (15%)

Query: 5   MKEDNLLL-TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N++  T     LKL DFGL       + +   TGT  + APE+         E K 
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA--------EGKP 332

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISP---DL 116
                D++S G++ + LL+   PF G +          K     + +     IS    D 
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPFGGEN--DDETLRNVKSCDWNMDDSAFSGISEDGKDF 390

Query: 117 AFIVQSCWVEDPNLRPSFSQ 136
              ++   + DPN R +  Q
Sbjct: 391 ---IRKLLLADPNTRMTIHQ 407

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 26/193 (13%)

Query: 6   KEDNLLLT---PDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           K  N+L      + +S+++ DFG A++      ++     T  ++APE    V  RQG  
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE----VLERQG-- 196

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSN-LQAAYAAAFKHARPGLPED----ISP-- 114
             Y+   D++S G++L+ +LT   PF    +       A     +  L       +S   
Sbjct: 197 --YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA 254

Query: 115 -DLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTE 173
            DL   V      DP+ R + + +   L           P    +  +            
Sbjct: 255 KDL---VSKMLHVDPHQRLTAALV---LRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAAT 308

Query: 174 FSARARGKFAFLR 186
           +SA  R +   L 
Sbjct: 309 YSALNRNQSPVLE 321

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWM-APELYSTVTLRQGEKKH 63
           +K  N+++  D   LK+ DFGLAR    + MMT    T R+  APE+             
Sbjct: 153 LKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVT-RYYRAPEVILG--------MG 202

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMS 91
           Y   VD++S G ++ E++   + F G  
Sbjct: 203 YKENVDIWSVGCIMGEMIKGGVLFPGTD 230

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 34/193 (17%)

Query: 5   MKEDNLLL---TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N++L         +KL DFGLA E           GT  ++APE+     +     
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI-----VNY--- 192

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISP---D 115
           +    + D++S G++ + LL+   PF G +    L    A ++           S    D
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS-QTSELAKD 251

Query: 116 LAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP---SPSVPESDTNEAAATSNGAMT 172
               ++   V++   R +  +           LR P        ++     +  +     
Sbjct: 252 F---IRKLLVKETRKRLTIQEA----------LRHPWITPVDTQQAMVRRESVVNLENFK 298

Query: 173 EFSARARGKFAFL 185
           +   R R K +F 
Sbjct: 299 KQYVRRRWKLSFS 311

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 17/129 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAET--GTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   +K+ DFG A+           T  GT  ++APE    V   +    
Sbjct: 132 LKPENILLDKN-GHIKITDFGFAKYVPDV----TYTLCGTPDYIAPE----VVSTKP--- 179

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            YN  +D +SFGI+++E+L    PF   SN    Y     +A    P   + D+  ++  
Sbjct: 180 -YNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTY-EKILNAELRFPPFFNEDVKDLLSR 236

Query: 123 CWVEDPNLR 131
               D + R
Sbjct: 237 LITRDLSQR 245

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 56.8 bits (138), Expect = 4e-10
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K +N+L+T     +KL DFG AR  T  ++    E  T  YR  +PEL     +     
Sbjct: 128 VKPENILITKH-SVIKLCDFGFARLLTGPSDYYDDEVATRWYR--SPELL----VGD--- 177

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
             Y   VDV++ G V  ELL+    + G S++ 
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD 210

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 56.9 bits (138), Expect = 4e-10
 Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 35/193 (18%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K   +LL + +  + +KL  FG+A +      +     GT  +MAPE+     ++   +
Sbjct: 156 VKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-----VK---R 207

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSN--LQAAYAAAFKHARPGLPEDISP---DL 116
           + Y   VDV+  G++L+ LL+  LPF G      +      +K         IS    DL
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS-HISESAKDL 266

Query: 117 AFIVQSCWVEDPNLRPSFSQIIR---MLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTE 173
              V+   + DP  R +  + +    +     +  +   P   E             + +
Sbjct: 267 ---VRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQ------------LRK 311

Query: 174 FSARARGKFAFLR 186
           F+AR + K A L 
Sbjct: 312 FNARRKLKGAVLA 324

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 56.8 bits (138), Expect = 4e-10
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 14/94 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K  NLL+      LKLA+FGLAR   +     +AE  T  YR   P++     L     
Sbjct: 127 LKPQNLLIN-RNGELKLANFGLARAFGIPVRCYSAEVVTLWYR--PPDV-----LFGA-- 176

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLP-FEGMSNLQ 94
           K Y+  +D++S G +  EL     P F G     
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 22/146 (15%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLL  +    + LKL DFG A+E T    +T    T  ++APE    V   +    
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE----VLGPEK--- 239

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPED----ISP-- 114
            Y+   D++S G++++ LL    PF       +        +  +   P      +S   
Sbjct: 240 -YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 298

Query: 115 -DLAFIVQSCWVEDPNLRPSFSQIIR 139
             L   +++    +P  R + ++ + 
Sbjct: 299 KML---IRNLLKTEPTQRMTITEFMN 321

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 56.7 bits (137), Expect = 5e-10
 Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 8/103 (7%)

Query: 69  DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE------DISPDLAFIVQS 122
           D+   G  L+ LL NR P    + +++  A A +       E      DI   ++ +   
Sbjct: 184 DIRGIGASLYALLVNRWPLPE-AGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242

Query: 123 CWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAA 165
               D  +R + S ++ ++              P  +   +AA
Sbjct: 243 SVQGDGGIRSA-STLLNLMQQATAVADRTEVLGPIDEAPVSAA 284

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 56.4 bits (137), Expect = 5e-10
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K  NLL+   +  LK+ADFGLAR   +     T E  T  YR  AP++     L     
Sbjct: 126 LKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTLWYR--APDV-----LMGS-- 175

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           K Y+  +D++S G +  E++     F G+S   
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 56.4 bits (137), Expect = 5e-10
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 13/93 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K  NLL+     +LKLADFGLAR   +     T E  T  YR  AP++     L  G  
Sbjct: 145 LKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYR--APDV-----L-MGS- 194

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           K Y+  VD++S G +  E++T +  F G+++  
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 56.1 bits (136), Expect = 7e-10
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 21/141 (14%)

Query: 5   MKEDNLLL---TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N++L         +KL DFGLA E           GT  ++APE+     +     
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI-----VNY--- 192

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISP---D 115
           +    + D++S G++ + LL+   PF G +    L    + ++           S    D
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS-HTSELAKD 251

Query: 116 LAFIVQSCWVEDPNLRPSFSQ 136
               ++   V++   R +  +
Sbjct: 252 F---IRKLLVKETRKRLTIQE 269

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 23/97 (23%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPEL-----YSTVTLR 57
           +K  N+L+T     +KLADFGLAR  +    +T+   T  YR  APE+     Y+T    
Sbjct: 146 LKPQNILVT-SSGQIKLADFGLARIYSFQMALTSVVVTLWYR--APEVLLQSSYAT---- 198

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
                     VD++S G +  E+   +  F G S++ 
Sbjct: 199 ---------PVDLWSVGCIFAEMFRRKPLFRGSSDVD 226

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 55.7 bits (135), Expect = 9e-10
 Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 21/141 (14%)

Query: 5   MKEDNLLL---TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N++L      +  +K+ DFGLA +           GT  ++APE+     +     
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI-----VNY--- 191

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISP---D 115
           +    + D++S G++ + LL+   PF G +    L    A  ++        + S    D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS-NTSALAKD 250

Query: 116 LAFIVQSCWVEDPNLRPSFSQ 136
               ++   V+DP  R +   
Sbjct: 251 F---IRRLLVKDPKKRMTIQD 268

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 55.7 bits (135), Expect = 9e-10
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 21/140 (15%)

Query: 5   MKEDNLLL-TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           ++ +N++  T    ++K+ +FG AR+    +          + APE+      +      
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-----HQH---DV 179

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPED----ISP---DL 116
            +   D++S G +++ LL+   PF   +           +A     E+    IS    D 
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAET--NQQIIENIMNAEYTFDEEAFKEISIEAMDF 237

Query: 117 AFIVQSCWVEDPNLRPSFSQ 136
              V    V++   R + S+
Sbjct: 238 ---VDRLLVKERKSRMTASE 254

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 12/91 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRW-MAPELYSTVTLRQGEKKH 63
           +K  NL +  D + LK+ DFGLAR     + MT    T RW  APE+            H
Sbjct: 158 LKPSNLAVNEDCE-LKILDFGLAR--HTADEMTGYVAT-RWYRAPEIMLNW-------MH 206

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           YN  VD++S G ++ ELLT R  F G  ++ 
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 32/190 (16%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K  N+LL +      +K+ DFG++R+      +    GT  ++APE+     L      
Sbjct: 157 LKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEI-----LNY---D 208

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISP---DL 116
                 D+++ GI+ + LLT+  PF G  N             ++       +S    D 
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS-SVSQLATDF 267

Query: 117 AFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP--SPSVPESDTNEAAATSNGAMTEF 174
              +QS  V++P  RP+              L          E+  +    +S+    + 
Sbjct: 268 ---IQSLLVKNPEKRPTAEIC----------LSHSWLQQWDFENLFHPEETSSSSQTQDH 314

Query: 175 SARARGKFAF 184
           S R+      
Sbjct: 315 SVRSSEDKTS 324

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGT--YRWMAPELYSTVTLRQGEKK 62
           +K +N+L+T    ++KLADFGLAR  +    +T    T  YR  APE+     L      
Sbjct: 146 LKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYR--APEVL----L--QST- 195

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
            Y   VD++S G +  E+   +  F G S   
Sbjct: 196 -YATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 15/128 (11%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +NLL+  DQ+  +++ DFG A+   V        GT   +APE    + L +G    
Sbjct: 167 LKPENLLI--DQQGYIQVTDFGFAKR--VKGRTWTLCGTPEALAPE----IILSKG---- 214

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN  VD ++ G++++E+     PF         Y       +   P   S DL  ++++ 
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFA-DQPIQIY-EKIVSGKVRFPSHFSSDLKDLLRNL 272

Query: 124 WVEDPNLR 131
              D   R
Sbjct: 273 LQVDLTKR 280

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 13/93 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K  NLL+   +  LKL DFGLAR   +     ++E  T  YR  AP++     +  G  
Sbjct: 134 LKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR--APDVL----M--GS- 183

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           + Y+  +D++S G +L E++T +  F G ++ +
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 13/93 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K  NLL+  ++  LKLADFGLAR +++ T+    E  T  YR   P++     L     
Sbjct: 126 LKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYR--PPDI-----LLGS-- 175

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
             Y+ ++D++  G + +E+ T R  F G +  +
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 12/91 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRW-MAPELYSTVTLRQGEKKH 63
           +K  NL +  D + LK+ DFGLAR       MT    T RW  APE+            H
Sbjct: 152 LKPGNLAVNEDCE-LKILDFGLAR--HADAEMTGYVVT-RWYRAPEVI-------LSWMH 200

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           YN  VD++S G ++ E+LT +  F+G   L 
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 26/149 (17%)

Query: 6   KEDNLLL-TPDQKS-LKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           K +NLL    +    +K+ DFG AR      + +     T  + APEL     L    + 
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL-----LN---QN 184

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA-----AFKHARPGLPED----IS 113
            Y+   D++S G++L+ +L+ ++PF+         +A       K        +    +S
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244

Query: 114 P---DLAFIVQSCWVEDPNLRPSFSQIIR 139
               DL   +Q     DPN R   S +  
Sbjct: 245 QEAKDL---IQGLLTVDPNKRLKMSGLRY 270

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 5   MKEDNLLL---TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N++L         +KL DFG+A +           GT  ++APE+     +     
Sbjct: 134 LKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI-----VNY--- 185

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEG 89
           +    + D++S G++ + LL+   PF G
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASPFLG 213

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 30/161 (18%)

Query: 6   KEDNLLL-TPDQKS-LKLADFGLAR--------EETVTEMMTAETGTYRWMAPELYSTVT 55
           K +N+L   P+Q S +K+ DF L              T  +    G+  +MAPE+   V 
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV---VE 194

Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDI- 112
               E   Y+ + D++S G++L+ LL+   PF     S+       A    +  L E I 
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ 254

Query: 113 -------SPDLAFI-------VQSCWVEDPNLRPSFSQIIR 139
                    D A I       +    V D   R S +Q+++
Sbjct: 255 EGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 37/185 (20%), Positives = 61/185 (32%), Gaps = 44/185 (23%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K +N+L++     +KL DFG AR      E+   E  T  YR  APEL        G+ 
Sbjct: 150 IKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATRWYR--APELLV------GD- 199

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPF------------------------EGMSNLQAAY 97
             Y   VDV++ G ++ E+      F                        E  +      
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259

Query: 98  AAAFKHARPGLP-----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS 152
                  +   P       +S  +  + + C   DP+ RP  ++++     F        
Sbjct: 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH--DFFQMDGFAE 317

Query: 153 PSVPE 157
               E
Sbjct: 318 RFSQE 322

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 16/96 (16%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGT--YRWMAPELYSTVTLRQ 58
           +K  NLLL      LK+ DFGLAR    +   T  +T    T  YR  APE+        
Sbjct: 154 LKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR--APEIM------- 203

Query: 59  GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
              K Y   +D++S G +L E+L+NR  F G   L 
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 12/91 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWM-APELYSTVTLRQGEKKH 63
           +K  NL +  D + LK+ DFGLAR       MT    T RW  APE+             
Sbjct: 154 LKPGNLAVNEDCE-LKILDFGLAR--QADSEMTGYVVT-RWYRAPEVI-------LNWMR 202

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           Y   VD++S G ++ E++T +  F+G  +L 
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 16/97 (16%)

Query: 5   MKEDNLLLTPDQKS----LKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLR 57
           +K  NLLL+    S    LK+ DFGLAR   +     T E  T  YR   PE+     L 
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYR--PPEIL----L- 210

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
            G  +HY+  VD++S   +  E+L     F G S + 
Sbjct: 211 -GS-RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID 245

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 53.8 bits (130), Expect = 5e-09
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 17/97 (17%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-----ETVTEMMTAETGT--YRWMAPELYSTVTLR 57
           MK  N+L+T     LKLADFGLAR       +     T    T  YR   PEL     L 
Sbjct: 150 MKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR--PPELL----L- 201

Query: 58  QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
            GE + Y   +D++  G ++ E+ T     +G +   
Sbjct: 202 -GE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 236

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 53.0 bits (128), Expect = 9e-09
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGT--YRWMAPELYSTVTLRQGEK 61
           +K +NLLL  +   LKLADFGLA+         T +  T  YR  APEL     L     
Sbjct: 138 LKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYR--APEL-----LFGA-- 187

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           + Y   VD+++ G +L ELL       G S+L 
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 23/96 (23%)

Query: 9   NLLLTPDQKSLKLADFGLAR-----------EETVTEMMTAETGT--YRWMAPELYSTVT 55
           NLL+  +   LK+ DFGLAR                  M     T  YR  APE+     
Sbjct: 142 NLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR--APEVM---- 194

Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 91
                   Y+  +DV+S G +L EL   R  F G  
Sbjct: 195 ---LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 51.0 bits (122), Expect = 5e-08
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 18/96 (18%)

Query: 5   MKEDNLLLTPDQKS---LKLADFGLAREETV-TEMMTAETGT-----YRWMAPELYSTVT 55
           +K  N+L+  +      +K+AD G AR      + +           YR  APEL     
Sbjct: 154 LKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR--APELL---- 207

Query: 56  LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 91
           L  G  +HY   +D+++ G +  ELLT+   F    
Sbjct: 208 L--GA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 15/90 (16%)

Query: 5   MKEDNLLLTPDQKS-----LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           +K +N+L+           +K+AD G A         + +T  YR  +PE    V L   
Sbjct: 158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR--SPE----VLLGAP 211

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEG 89
               +    D++S   +++EL+T    FE 
Sbjct: 212 ----WGCGADIWSTACLIFELITGDFLFEP 237

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 2e-06
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 57/220 (25%)

Query: 8   DNLLLTPDQKSLKLADFGLAR---EETVTEMM-TAETGTYRWMAPELYSTVTLRQGEKKH 63
           D+++++ D  S  L  F       EE V + +       Y+++   + +         + 
Sbjct: 52  DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111

Query: 64  YN-------NKVDVYSFGIV------------LWELLTNR-LPFEGM-----SNLQAAYA 98
           Y        N   V++   V            L EL   + +  +G+     + +     
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171

Query: 99  AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS--QIIRMLNAFLFTLRPPSPSVP 156
            ++K       +       F     W+   NL+   S   ++ ML   L+ + P   S  
Sbjct: 172 LSYK------VQCKMDFKIF-----WL---NLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 157 ESDTNEAAATSNGAMTEFSARARGKFAFLRQLFTAKRTKN 196
           +  +N             S +A      LR+L  +K  +N
Sbjct: 218 DHSSNIKLRIH-------SIQAE-----LRRLLKSKPYEN 245

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 34/107 (31%)

Query: 9   NLLLTPDQKSLKLADFGLAR----------------------EETVTEMMTAETGT--YR 44
           N+LL  +   +K+ADFGL+R                       +    ++T    T  YR
Sbjct: 139 NILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYR 197

Query: 45  WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 91
             APE+             Y   +D++S G +L E+L  +  F G S
Sbjct: 198 --APEILLGS-------TKYTKGIDMWSLGCILGEILCGKPIFPGSS 235

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 45.7 bits (108), Expect = 3e-06
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 14/82 (17%)

Query: 15  DQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS 72
           ++  +K+AD G A    +  TE +   T  YR  + E    V +  G    YN   D++S
Sbjct: 231 EKLKVKIADLGNACWVHKHFTEDIQ--TRQYR--SLE----VLIGSG----YNTPADIWS 278

Query: 73  FGIVLWELLTNRLPFEGMSNLQ 94
              + +EL T    FE  S  +
Sbjct: 279 TACMAFELATGDYLFEPHSGEE 300

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 5   MKEDNLLLT-PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL    +  +K+ DFG +  E        ++  YR  APE    V L       
Sbjct: 226 LKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYR--APE----VILGAR---- 275

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           Y   +D++S G +L ELLT      G     
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 43/146 (29%)

Query: 5   MKEDNLLL-TPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLL  +    + LKL DFG A                     E            +
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFA--------------------KET---------TGE 173

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPED----ISP-- 114
            Y+   D++S G++++ LL    PF       +        +  +   P      +S   
Sbjct: 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 233

Query: 115 -DLAFIVQSCWVEDPNLRPSFSQIIR 139
             L   +++    +P  R + ++ + 
Sbjct: 234 KML---IRNLLKTEPTQRMTITEFMN 256

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 35/103 (33%)

Query: 9   NLLLTPDQKSLKLADFGLAR-----------------------EETVTEMMTAETGT--Y 43
           N LL  D   +K+ DFGLAR                        + + + +T+   T  Y
Sbjct: 159 NCLLNQDCS-VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWY 217

Query: 44  RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLP 86
           R  APEL          +++Y   +D++S G +  ELL     
Sbjct: 218 R--APELILL-------QENYTKSIDIWSTGCIFAELLNMLQS 251

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 5   MKEDNLLLT-PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N+LL  P + ++K+ DFG + +         ++  YR  +PE    V L       
Sbjct: 185 LKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYR--SPE----VLLGMP---- 234

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           Y+  +D++S G +L E+ T    F G + + 
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 43/190 (22%), Positives = 63/190 (33%), Gaps = 54/190 (28%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----------------------------EETVTEMM 36
           +K  N L+  D  S+K+ DFGLAR                             + +   +
Sbjct: 182 LKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL 240

Query: 37  TAETGT--YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 94
           T    T  YR  APEL     L Q   ++Y   +DV+S G +  ELL             
Sbjct: 241 TGHVVTRWYR--APEL----ILLQ---ENYTEAIDVWSIGCIFAELLNM----------I 281

Query: 95  AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPS 154
               A      P  P      L+   ++      + R +  Q+  + N     L  PS  
Sbjct: 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN----ILGTPSEE 337

Query: 155 VPESDTNEAA 164
             E+   E A
Sbjct: 338 DIEALEKEDA 347

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.98
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.96
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.96
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.96
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.96
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.96
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.96
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.96
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
3niz_A	311	Rhodanese family protein; structural genomics, str	99.96
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.95
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.95
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.95
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.95
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.95
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.95
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.95
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.95
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.95
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.95
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.95
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.95
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.95
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.95
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.95
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.95
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.95
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.95
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.95
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.95
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.95
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.95
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.95
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.95
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.94
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.94
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.94
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.94
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.94
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.94
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.94
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.94
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.94
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.94
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.94
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.94
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.94
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.94
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
3bhy_A	283	Death-associated protein kinase 3; death associate	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.94
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.94
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.93
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.93
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.93
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.93
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.93
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.93
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.93
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.92
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.92
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.9
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.88
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.87
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.84
3uqc_A	286	Probable conserved transmembrane protein; structur	99.84
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.66
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.3
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.43
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.28
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.18
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.11
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.91
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.41
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.15
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.19
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.11
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.78
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	94.67
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	94.65
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	94.45
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.22
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.85
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.72
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.21
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	92.92
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	91.94
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	91.68
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	90.64
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	90.45
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	90.04
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	89.65
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	89.21
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	86.95
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	86.11
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	86.1
3mes_A	424	Choline kinase; malaria, structural genomics, stru	82.18
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	80.7

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5.9e-38  Score=244.10  Aligned_cols=138  Identities=28%  Similarity=0.560  Sum_probs=117.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+|+......   .....+||+.|||||++.+        ..|+.++|||||||++
T Consensus       207 iHRDLK~~NILl~~~-~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~--------~~y~~ksDVwS~Gv~l  277 (353)
T 4ase_A          207 IHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--------RVYTIQSDVWSFGVLL  277 (353)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ecCccCccceeeCCC-CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhc--------CCCCCcccEeehHHHH
Confidence            799999999999976 689999999998543322   2234578999999999864        6789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||+| |..||.+...............++..|..+++++.+++.+||+.||.+|||+.+++++|+.++..
T Consensus       278 ~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          278 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            99998 89999887655555555566777888999999999999999999999999999999999988764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.8e-37  Score=235.10  Aligned_cols=140  Identities=28%  Similarity=0.496  Sum_probs=108.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+||||+.+ +.+||+|||+|+....   .......+||+.|||||++.+.     ....|+.++|||||||++
T Consensus       154 iHRDlKp~NILl~~~-~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~-----~~~~y~~ksDVwS~Gvvl  227 (307)
T 3omv_A          154 IHRDMKSNNIFLHEG-LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ-----DNNPFSFQSDVYSYGIVL  227 (307)
T ss_dssp             BCSCCCSSSEEEETT-EEEEECCCSSCBC------------CCCCTTSCCHHHHHCC-----SSCCCCHHHHHHHHHHHH
T ss_pred             cCCccCHHHEEECCC-CcEEEeeccCceecccCCcceeecccccCCCccCHHHhhcc-----CCCCCCcHHHhHhHHHHH
Confidence            799999999999976 7899999999985432   2223456899999999998531     134689999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCC----CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHAR----PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |||++|+.||.+................    +..+..+++++.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus       228 ~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          228 YELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             HHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            9999999999987765554444333322    23456789999999999999999999999999999886643

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.5e-37  Score=232.77  Aligned_cols=135  Identities=29%  Similarity=0.458  Sum_probs=101.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+|+.........+.+||+.|||||++.+       ...++.++||||+||++|+|
T Consensus       134 iHRDiKP~NILl~~~-~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~-------~~y~~~~~DiwSlGvily~l  205 (275)
T 3hyh_A          134 VHRDLKPENLLLDEH-LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG-------KLYAGPEVDVWSCGVILYVM  205 (275)
T ss_dssp             CCCCCCTTTEEECTT-CCEEECCSSCC---------------CTTSCHHHHSS-------SSCCCTHHHHHHHHHHHHHH
T ss_pred             ccccCChHHeEECCC-CCEEEeecCCCeecCCCCccCCeeECcccCChhhhcC-------CCCCCChhhhHHHHHHHHHH
Confidence            799999999999976 6899999999987655555567899999999999864       23346899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|+.||.+..... ... ......+.+|..+++++.+|+.+||+.||.+|||++|+++  |.|+..
T Consensus       206 ltg~~PF~~~~~~~-~~~-~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~--hpw~k~  268 (275)
T 3hyh_A          206 LCRRLPFDDESIPV-LFK-NISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ--DDWFKV  268 (275)
T ss_dssp             HHSSCSSCCSSHHH-HHH-HHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH--CHHHHT
T ss_pred             HHCCCCCCCCCHHH-HHH-HHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc--Cccccc
Confidence            99999998765432 222 2334556778889999999999999999999999999999  777753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.4e-37  Score=235.94  Aligned_cols=134  Identities=28%  Similarity=0.545  Sum_probs=109.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+||||+...+.+||+|||+|+.... ....+.+||+.|||||++.         +.|+.++|||||||++|||
T Consensus       153 iHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-~~~~~~~GTp~YmAPE~~~---------~~y~~~~DiwSlGvilyel  222 (290)
T 3fpq_A          153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYE---------EKYDESVDVYAFGMCMLEM  222 (290)
T ss_dssp             CCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGG---------TCCCTHHHHHHHHHHHHHH
T ss_pred             EecccChhheeEECCCCCEEEEeCcCCEeCCC-CccCCcccCccccCHHHcC---------CCCCcHHHHHHHHHHHHHH
Confidence            79999999999985447899999999985433 2345678999999999874         3589999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCC-CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|+.||.+................+ ..+..+++++.+|+.+||..||.+|||++|+++  |.|+.
T Consensus       223 ltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~--Hp~~~  287 (290)
T 3fpq_A          223 ATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN--HAFFQ  287 (290)
T ss_dssp             HHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGC
T ss_pred             HHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc--Ccccc
Confidence            99999998776655555544443332 345668899999999999999999999999998  66653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.7e-37  Score=240.04  Aligned_cols=138  Identities=30%  Similarity=0.496  Sum_probs=112.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+||||+.+ +.+||+|||+|+.... .....+.+||+.|||||++.+        ..|+.++||||+||++||
T Consensus       192 iHRDlKp~NILl~~~-g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~--------~~y~~~~DiWSlGvilye  262 (346)
T 4fih_A          192 IHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR--------LPYGPEVDIWSLGIMVIE  262 (346)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             ccccCCHHHEEECCC-CCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCC--------CCCCcHHHHHHHHHHHHH
Confidence            799999999999977 6899999999986543 234566899999999999853        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      |++|..||.+....... ........+  ..+..+++++.+|+.+||..||.+|||+.|+++  |.|+....+
T Consensus       263 ml~G~~PF~~~~~~~~~-~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~--Hp~~~~~~~  332 (346)
T 4fih_A          263 MVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGP  332 (346)
T ss_dssp             HHHSSCTTTTSCHHHHH-HHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CGGGGGCCC
T ss_pred             HHHCCCCCCCcCHHHHH-HHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc--CHhhcCCCC
Confidence            99999999987654433 333333333  234568999999999999999999999999999  788775443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.1e-37  Score=236.16  Aligned_cols=134  Identities=28%  Similarity=0.515  Sum_probs=113.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   .....+||+.|||||++.+        +.|+.++|||||||++
T Consensus       167 iHRDLK~~NILl~~~-~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~--------~~~s~ksDVwSfGvvl  237 (308)
T 4gt4_A          167 VHKDLATRNVLVYDK-LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY--------GKFSIDSDIWSYGVVL  237 (308)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             CCCCccccceEECCC-CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhC--------CCCCccchhhhHHHHH
Confidence            799999999999966 789999999998543322   2344679999999999854        6789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |||+| |..||.+..... ..........++.|..+++++.+|+.+||+.||.+||||.+|+++|+.+
T Consensus       238 ~El~t~g~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          238 WEVFSYGLQPYCGYSNQD-VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHTTTCCTTTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            99998 899999876543 3444455666778899999999999999999999999999999999865

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.3e-37  Score=235.50  Aligned_cols=136  Identities=27%  Similarity=0.523  Sum_probs=108.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+||||+.+ +.+||+|||+++......   .....+||+.|||||++.+        ..|+.++|||||||++
T Consensus       180 iHRDLKp~NILl~~~-~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~--------~~~~~~sDvwS~Gvvl  250 (329)
T 4aoj_A          180 VHRDLATRNCLVGQG-LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY--------RKFTTESDVWSFGVVL  250 (329)
T ss_dssp             CCSCCCGGGEEEETT-TEEEECCCC----------------CCCCGGGCCHHHHTT--------CCCCHHHHHHHHHHHH
T ss_pred             ecccccHhhEEECCC-CcEEEcccccceeccCCCcceecCcccccccccChhhhcC--------CCCCccccccchHHHH
Confidence            799999999999976 789999999998543322   2234679999999999853        6789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |||+| |+.||.+...... ........+++.|..+++++.+|+.+||+.||.+|||+.|++++|+.+..
T Consensus       251 ~Ellt~G~~Pf~~~~~~~~-~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          251 WEIFTYGKQPWYQLSNTEA-IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HHHHTTSCCTTCSSCHHHH-HHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCHHHH-HHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            99998 8999998775443 34444556778889999999999999999999999999999999998755

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.1e-37  Score=238.84  Aligned_cols=141  Identities=24%  Similarity=0.246  Sum_probs=110.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc------cccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      |||||||+||||+.++..+||+|||+|+......      .....+||+.|||||++.+        ..|+.++||||+|
T Consensus       172 iHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~--------~~y~~~~DiwSlG  243 (336)
T 4g3f_A          172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG--------KPCDAKVDIWSSC  243 (336)
T ss_dssp             ECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTT--------CCCCTHHHHHHHH
T ss_pred             eecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCC--------CCCCcHHHHHHHH
Confidence            7999999999999774469999999998543221      1233589999999999864        6789999999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |++|||++|+.||.+...............+ ..+|..+++++.+|+.+||+.||.+|||+.|++++|...+....
T Consensus       244 vilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          244 CMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             HHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            9999999999999876543322222222221 24677899999999999999999999999999999988776543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=6.5e-37  Score=233.49  Aligned_cols=137  Identities=23%  Similarity=0.472  Sum_probs=114.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+|+.......   ....+||+.|||||++.+        ..|+.++|||||||++
T Consensus       150 iHRDlKp~NILl~~~-~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~--------~~~~~k~DVwS~Gvvl  220 (299)
T 4asz_A          150 VHRDLATRNCLVGEN-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY--------RKFTTESDVWSLGVVL  220 (299)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccCccCHhhEEECCC-CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcC--------CCCCchhhHHHHHHHH
Confidence            799999999999976 7899999999985432221   223468999999999864        6789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||+| |+.||.+..... ..........++.|..+++++.+|+.+||+.||.+|||+++++++|+.+...
T Consensus       221 ~Ellt~G~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          221 WEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHHHTTTCCTTTTSCHHH-HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            99998 899999876544 3344455666778899999999999999999999999999999999887654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.1e-37  Score=239.93  Aligned_cols=134  Identities=32%  Similarity=0.493  Sum_probs=111.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+||||+.+ +.+||+|||+|+...... ...+.+||+.|||||++.+        ..|+.++||||+||++||
T Consensus       147 iHRDlKp~NILl~~~-g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~--------~~y~~~~DiwSlGvilye  217 (350)
T 4b9d_A          147 LHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN--------KPYNNKSDIWALGCVLYE  217 (350)
T ss_dssp             EETTCCGGGEEECTT-CCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTT--------CCCCHHHHHHHHHHHHHH
T ss_pred             eeccCCHHHEEECCC-CCEEEcccccceeecCCcccccccCCCccccCHHHHCC--------CCCCcHHHHHHHHHHHHH
Confidence            699999999999977 689999999998654432 2345689999999999854        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++|+.||.+....... ........++.+..+++++.+|+.+||+.||.+|||+.|+++  +.|+.
T Consensus       218 mltG~~PF~~~~~~~~~-~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~--hp~~~  281 (350)
T 4b9d_A          218 LCTLKHAFEAGSMKNLV-LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE--KGFIA  281 (350)
T ss_dssp             HHHSSCSCCCSSHHHHH-HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT--SHHHH
T ss_pred             HHHCCCCCCCcCHHHHH-HHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc--CHHhh
Confidence            99999999987654433 333444555677889999999999999999999999999998  55553

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=240.30  Aligned_cols=138  Identities=30%  Similarity=0.492  Sum_probs=112.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+||||+.+ +.+||+|||+|+.... .....+.+||+.|||||++.+        ..|+.++||||+||++||
T Consensus       269 iHRDiKp~NILl~~~-g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~--------~~y~~~~DiWSlGvilye  339 (423)
T 4fie_A          269 IHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR--------LPYGPEVDIWSLGIMVIE  339 (423)
T ss_dssp             ECCCCSTTTEEECTT-CCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             ecccCCHHHEEEcCC-CCEEEecCccceECCCCCccccccccCcCcCCHHHHCC--------CCCCcHHHHHHHHHHHHH
Confidence            799999999999977 6899999999986543 233456799999999999853        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      |++|..||.+.......... .....+  ..+..+++++.+|+.+||..||.+|||+.|+++  |.|+....+
T Consensus       340 ml~G~~PF~~~~~~~~~~~i-~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~--Hp~~~~~~~  409 (423)
T 4fie_A          340 MVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGP  409 (423)
T ss_dssp             HHHSSCTTTTSCHHHHHHHH-HHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CGGGGGCCC
T ss_pred             HHHCCCCCCCcCHHHHHHHH-HcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc--CHHhcCCCC
Confidence            99999999987765443332 233322  345678999999999999999999999999999  788765443

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.3e-36  Score=230.34  Aligned_cols=133  Identities=29%  Similarity=0.523  Sum_probs=107.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+|+.... .....+.+||+.|||||++.+        ..|+.++||||+||++||
T Consensus       148 iHRDlKp~NILl~~~-g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~--------~~y~~~~DiwSlGvilye  218 (304)
T 3ubd_A          148 IYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR--------RGHTQSADWWSFGVLMFE  218 (304)
T ss_dssp             CCSSCCGGGEEECTT-SCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHT--------SCCCTHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHeEEcCC-CCEEecccccceeccCCCccccccccCcccCCHHHhcc--------CCCCCCCcccchHHHHHH
Confidence            799999999999977 6899999999985433 333456789999999999853        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF-----SQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~-----~~~l~~l~~~~~  146 (198)
                      |++|+.||.+.+........  ....+.+|..+++++.+|+.+||+.||.+|||+     +|+++  |.|+.
T Consensus       219 mltG~~PF~~~~~~~~~~~i--~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~--Hp~f~  286 (304)
T 3ubd_A          219 MLTGTLPFQGKDRKETMTMI--LKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR--HSFFS  286 (304)
T ss_dssp             HHHSSCSSCCSSHHHHHHHH--HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT--SGGGT
T ss_pred             HHhCCCCCCCcCHHHHHHHH--HcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc--Ccccc
Confidence            99999999987654433322  334567788899999999999999999999984     67776  56654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.1e-36  Score=230.82  Aligned_cols=128  Identities=21%  Similarity=0.348  Sum_probs=106.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+||||+.+ +.+||+|||+|+....   .....+.+||+.|||||++.+        ..|+.++||||+||++
T Consensus       154 iHRDlKPeNILl~~~-g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~--------~~y~~~~DiWSlGvil  224 (311)
T 4aw0_A          154 IHRDLKPENILLNED-MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE--------KSACKSSDLWALGCII  224 (311)
T ss_dssp             ECSCCSGGGEEECTT-SCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHH--------SCBCHHHHHHHHHHHH
T ss_pred             ccCCCCHHHeEEcCC-CCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcC--------CCCCcHHHHHHHHHHH
Confidence            699999999999977 7899999999985432   223456799999999999864        6789999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |||++|..||.+.+.......  +....+.+|..+++++.+|+.+||..||.+|||++|++.
T Consensus       225 yeml~G~~PF~~~~~~~~~~~--i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          225 YQLVAGLPPFRAGNEGLIFAK--IIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHH--HHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             HHHHhCCCCCCCCCHHHHHHH--HHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence            999999999988664433222  233456778899999999999999999999999998643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.2e-34  Score=224.45  Aligned_cols=140  Identities=24%  Similarity=0.348  Sum_probs=108.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-----cccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-----TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++....     .....+.+||+.|+|||++.+       ...++.++||||+||
T Consensus       180 iHRDlKP~NIl~~~~-~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~-------~~~~~~~~DiWSlG~  251 (398)
T 4b99_A          180 IHRDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS-------LHEYTQAIDLWSVGC  251 (398)
T ss_dssp             BCCCCCGGGEEECTT-CCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTT-------CSCCCTHHHHHHHHH
T ss_pred             cCCCcCccccccCCC-CCEEEeecceeeecccCccccccccccceeChHhcCHHHhcC-------CCCCCChhheehhHH
Confidence            799999999999976 7899999999985432     123446799999999999764       356799999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccCCC----------------------CC-------CCCCcHHHHHHHHHhccc
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHARP----------------------GL-------PEDISPDLAFIVQSCWVE  126 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~~-------p~~~~~~~~~l~~~~l~~  126 (198)
                      ++|||++|++||.+.+..............+                      ..       ...+++++.+|+.+||..
T Consensus       252 il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~  331 (398)
T 4b99_A          252 IFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF  331 (398)
T ss_dssp             HHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcC
Confidence            9999999999999877655443322211111                      01       124688999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHhhcCC
Q 029154          127 DPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       127 dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ||.+|||+.|+++  |.|+.....
T Consensus       332 dP~~R~ta~e~L~--Hp~f~~~~~  353 (398)
T 4b99_A          332 EPSARISAAAALR--HPFLAKYHD  353 (398)
T ss_dssp             STTTSCCHHHHTT--SGGGTTTCC
T ss_pred             ChhHCcCHHHHhc--CHhhCcCCC
Confidence            9999999999999  888875543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.1e-33  Score=221.10  Aligned_cols=137  Identities=22%  Similarity=0.313  Sum_probs=100.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-----------------------------ccccCCCCccceeccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-----------------------------EMMTAETGTYRWMAPELY   51 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-----------------------------~~~~~~~gt~~y~aPE~~   51 (198)
                      |||||||+|||++.+.+.+||+|||+|+.....                             ....+.+||+.|+|||++
T Consensus       139 iHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l  218 (361)
T 4f9c_A          139 VHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL  218 (361)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHH
T ss_pred             EeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHH
Confidence            699999999999876578999999999743211                             112345899999999998


Q ss_pred             ccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHc-----------------------------
Q 029154           52 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-----------------------------  102 (198)
Q Consensus        52 ~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~-----------------------------  102 (198)
                      .+       ...|+.++||||+||++|||++|+.||...............                             
T Consensus       219 ~~-------~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~  291 (361)
T 4f9c_A          219 TK-------CPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDL  291 (361)
T ss_dssp             TT-------CSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCH
T ss_pred             cC-------CCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhh
Confidence            64       346889999999999999999999999655432221111000                             


Q ss_pred             --------c----------------CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          103 --------H----------------ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       103 --------~----------------~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                              .                ........+++++.+|+.+||..||.+|+|++|+++  |.|+.
T Consensus       292 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~--Hp~f~  357 (361)
T 4f9c_A          292 RKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL--HPFFK  357 (361)
T ss_dssp             HHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT--SGGGT
T ss_pred             hHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc--CcccC
Confidence                    0                000112457899999999999999999999999998  77764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=9.8e-35  Score=221.64  Aligned_cols=134  Identities=31%  Similarity=0.443  Sum_probs=94.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-------------cccCCCCccceecccccccccccccccCCCCch
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-------------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNK   67 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~   67 (198)
                      |||||||+|||++.+ +.+||+|||+|+......             ...+.+||+.|||||++.+        ..|+.+
T Consensus       140 iHRDlKp~NILl~~~-~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~--------~~y~~~  210 (299)
T 4g31_A          140 MHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG--------NSYSHK  210 (299)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECCCCCC--------------------------CCCTTSCHHHHTT--------CCCCTH
T ss_pred             ccccCcHHHeEECCC-CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC--------CCCCCH
Confidence            799999999999977 689999999998543211             1234589999999999864        678999


Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           68 VDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        68 ~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +||||+||++|||++   ||.+................++.+...++.+.+|+.+||+.||.+|||+.|+++  +.|+..
T Consensus       211 ~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~--h~~~~~  285 (299)
T 4g31_A          211 VDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFED  285 (299)
T ss_dssp             HHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGGCC
T ss_pred             HHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc--CHhhCC
Confidence            999999999999996   776433222222222222222222335677889999999999999999999998  666654


Q ss_pred             c
Q 029154          148 L  148 (198)
Q Consensus       148 ~  148 (198)
                      .
T Consensus       286 ~  286 (299)
T 4g31_A          286 L  286 (299)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=3.7e-34  Score=219.08  Aligned_cols=143  Identities=22%  Similarity=0.364  Sum_probs=98.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+||||+.+ +.+||+|||+++......     .....+||+.|||||++.+...  .....++.++|||||||
T Consensus       130 iHRDlKp~NILl~~~-~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~--~~~~~~~~k~DVwS~Gv  206 (303)
T 3hmm_A          130 AHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN--MKHFESFKRADIYAMGL  206 (303)
T ss_dssp             ECSCCCGGGEEECTT-SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSC--TTCHHHHHHHHHHHHHH
T ss_pred             eeccCCcccEEECCC-CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhccccc--ccCCccChhHhhhhHHH
Confidence            699999999999977 789999999997433211     1224579999999999854110  00123577999999999


Q ss_pred             HHHHHHcCCCCCC----------CCC----cHHHHHHHH-HccCCCCCCCC-----CcHHHHHHHHHhcccCCCCCCCHH
Q 029154           76 VLWELLTNRLPFE----------GMS----NLQAAYAAA-FKHARPGLPED-----ISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        76 ~l~e~~~g~~p~~----------~~~----~~~~~~~~~-~~~~~~~~p~~-----~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|||++|.+||.          +..    ......... ....++.+|..     .+..+.+|+.+||..||.+||||.
T Consensus       207 vl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~  286 (303)
T 3hmm_A          207 VFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL  286 (303)
T ss_dssp             HHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHH
T ss_pred             HHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHH
Confidence            9999999976542          211    112222221 12334445433     234688999999999999999999


Q ss_pred             HHHHHHHHHHh
Q 029154          136 QIIRMLNAFLF  146 (198)
Q Consensus       136 ~~l~~l~~~~~  146 (198)
                      ++++.|+.+..
T Consensus       287 ei~~~L~~l~~  297 (303)
T 3hmm_A          287 RIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999988754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.98  E-value=5.7e-33  Score=229.40  Aligned_cols=135  Identities=24%  Similarity=0.396  Sum_probs=108.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+||||+.+ +++||+|||+|+...... ..+.+||+.|||||++..       ...|+.++|+||+||++|||
T Consensus       314 iHRDLKPeNILld~~-G~vKL~DFGlA~~~~~~~-~~t~~GTp~YmAPEvl~~-------~~~y~~~vDiWSLGvilYEm  384 (689)
T 3v5w_A          314 VYRDLKPANILLDEH-GHVRISDLGLACDFSKKK-PHASVGTHGYMAPEVLQK-------GVAYDSSADWFSLGCMLFKL  384 (689)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECSSCC-CCSCCSCGGGCCHHHHST-------TCCCCTHHHHHHHHHHHHHH
T ss_pred             cccCCchHHeEEeCC-CCEEecccceeeecCCCC-CCCccCCcCccCHHHHhC-------CCCCCcHHHHHHHHHHHHHH
Confidence            799999999999977 789999999998654432 356799999999999852       24689999999999999999


Q ss_pred             HcCCCCCCCCCcH-HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNL-QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|..||.+.... ............+.+|..+++++.+|+.+||..||.+|++     ++|+++  |.|+.
T Consensus       385 LtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~--HpfF~  454 (689)
T 3v5w_A          385 LRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE--SPFFR  454 (689)
T ss_dssp             HHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT--SGGGT
T ss_pred             HhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc--Ccccc
Confidence            9999999754321 1112223334566778899999999999999999999997     788888  66654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.97  E-value=4.3e-32  Score=223.43  Aligned_cols=138  Identities=25%  Similarity=0.331  Sum_probs=111.1

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ .+.+||+|||+++.........+.+||+.|||||++.+        ..|+.++||||+||++||
T Consensus       277 iHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~--------~~y~~~~DiWSlGvilye  348 (573)
T 3uto_A          277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG--------KPVGYYTDMWSVGVLSYI  348 (573)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTT--------CCBCHHHHHHHHHHHHHH
T ss_pred             eeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCC--------CCCCcHHHHHHHHHHHHH
Confidence            699999999999853 35799999999987665555566789999999999864        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC--CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR--PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++|..||.+................  ...+..+++++.+|+.+||..||.+||++.|+++  |.|+...
T Consensus       349 ml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~--Hpw~~~~  417 (573)
T 3uto_A          349 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE--HPWLTPG  417 (573)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--STTTSCC
T ss_pred             HHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc--CcCcCCC
Confidence            99999999987765443333222222  1223568999999999999999999999999999  6776543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=3.7e-31  Score=203.04  Aligned_cols=142  Identities=37%  Similarity=0.707  Sum_probs=107.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++...... ......||+.|+|||++.+        ..++.++||||+|+++|+
T Consensus       161 vH~Dikp~NIll~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  231 (309)
T 3p86_A          161 VHRNLKSPNLLVDKK-YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD--------EPSNEKSDVYSFGVILWE  231 (309)
T ss_dssp             CCTTCCGGGEEECTT-CCEEECCCC-----------------CCTTSCHHHHTT--------CCCCTTHHHHHHHHHHHH
T ss_pred             ECCCCChhhEEEeCC-CcEEECCCCCCccccccccccccCCCCccccChhhhcC--------CCCCchhhHHHHHHHHHH
Confidence            799999999999976 689999999997543322 2234578999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      +++|..||.+...................|..+++++.+++.+||..||.+||++.++++.|+.++....++
T Consensus       232 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          232 LATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             HHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence            999999998877655444444455667778889999999999999999999999999999999988765444

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=1.5e-30  Score=201.22  Aligned_cols=137  Identities=30%  Similarity=0.489  Sum_probs=111.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+       ....+.++||||+||++|+|
T Consensus       136 vHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~il~el  207 (328)
T 3fe3_A          136 VHRDLKAENLLLDAD-MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQG-------KKYDGPEVDVWSLGVILYTL  207 (328)
T ss_dssp             CCSCCCGGGEEECTT-SCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHT-------CCCCSHHHHHHHHHHHHHHH
T ss_pred             eccCCCHHHEEEcCC-CCEEEeeccCceecCCCCccccccCCcceeCcccccC-------CCcCCchhhhhhhHHHHHHH
Confidence            799999999999976 6799999999986554445567789999999999864       23335799999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ++|..||.+.......  ..........|..+++++.+++.+||..||.+|||+.++++  +.|+....
T Consensus       208 l~g~~pf~~~~~~~~~--~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~--h~~~~~~~  272 (328)
T 3fe3_A          208 VSGSLPFDGQNLKELR--ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK--DRWINAGH  272 (328)
T ss_dssp             HHSSCSSCCSSHHHHH--HHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT--CTTTTTTC
T ss_pred             HhCCCCCCCCCHHHHH--HHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc--CHhhcCCC
Confidence            9999999886643332  22334455678889999999999999999999999999999  77766443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.96  E-value=6.8e-30  Score=203.68  Aligned_cols=140  Identities=27%  Similarity=0.308  Sum_probs=108.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+++.+||+|||+++...........+||+.|+|||++.+       ...++.++||||+||++|||
T Consensus       178 vHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwSlG~il~el  250 (420)
T 1j1b_A          178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG-------ATDYTSSIDVWSAGCVLAEL  250 (420)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTT-------CSSCCTHHHHHHHHHHHHHH
T ss_pred             cccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcC-------CCCCCchhhhHHHHHHHHHH
Confidence            69999999999997656789999999986544444445689999999999753       24688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccC---------------CCC------------CCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHA---------------RPG------------LPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~---------------~~~------------~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ++|+.||.+...............               ...            ++..+++++.+|+.+||..||.+||+
T Consensus       251 l~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t  330 (420)
T 1j1b_A          251 LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  330 (420)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC
Confidence            999999998765444332221100               001            23456899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcC
Q 029154          134 FSQIIRMLNAFLFTLR  149 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~  149 (198)
                      +.|+++  |.|+....
T Consensus       331 ~~e~l~--hp~f~~~~  344 (420)
T 1j1b_A          331 PLEACA--HSFFDELR  344 (420)
T ss_dssp             HHHHHT--SGGGGGGG
T ss_pred             HHHHhC--CHhhcccc
Confidence            999998  77776544

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.96  E-value=6.9e-30  Score=199.33  Aligned_cols=138  Identities=28%  Similarity=0.560  Sum_probs=113.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......||..|+|||++.+        ..++.++||||||+++
T Consensus       215 vH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il  285 (359)
T 3vhe_A          215 IHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--------RVYTIQSDVWSFGVLL  285 (359)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEEcCC-CcEEEEeccceeeecccccchhccccCCCceeEChhhhcC--------CCCCchhhhhhHHHHH
Confidence            799999999999866 679999999997543221   2234567889999998853        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+|++ |..||.+...................+..+++++.+++.+||..||.+||++.+++++|+.++..
T Consensus       286 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          286 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            99998 99999887654554455555666777888999999999999999999999999999999988764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=1.4e-29  Score=199.81  Aligned_cols=139  Identities=24%  Similarity=0.356  Sum_probs=104.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc----------------------cccccCCCCccceecccccccccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV----------------------TEMMTAETGTYRWMAPELYSTVTLRQ   58 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~   58 (198)
                      |||||||+|||++.+ +.+||+|||+++....                      .......+||+.|+|||++.+     
T Consensus       131 vHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----  204 (388)
T 3oz6_A          131 LHRDMKPSNILLNAE-CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG-----  204 (388)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT-----
T ss_pred             EeCCCCHHHeEEcCC-CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC-----
Confidence            699999999999977 6899999999974321                      112334689999999999853     


Q ss_pred             cccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCC--------------------------------
Q 029154           59 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP--------------------------------  106 (198)
Q Consensus        59 ~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------------  106 (198)
                        ...++.++||||+||++|||++|.+||.+................+                                
T Consensus       205 --~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (388)
T 3oz6_A          205 --STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKR  282 (388)
T ss_dssp             --CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CC
T ss_pred             --CCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHH
Confidence              3568999999999999999999999998876544432221110100                                


Q ss_pred             -------------CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          107 -------------GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       107 -------------~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                                   ..+..+++++.+|+.+||..||.+|||+.++++  |.|+....
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~--Hp~~~~~~  336 (388)
T 3oz6_A          283 DIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALK--HPFVSIFH  336 (388)
T ss_dssp             CCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTT--STTTTTTC
T ss_pred             HhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhC--CHHHHHhc
Confidence                         012257889999999999999999999999999  77766544

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=9.8e-30  Score=194.08  Aligned_cols=138  Identities=31%  Similarity=0.485  Sum_probs=110.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||++...... ......+||+.|+|||++.+        ..++.++||||+|+++|+
T Consensus       138 ~H~Dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  208 (297)
T 3fxz_A          138 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--------KAYGPKVDIWSLGIMAIE  208 (297)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHC--------SCBCTHHHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEECCC-CCEEEeeCCCceecCCcccccCCccCCcCccChhhhcC--------CCCCcHHHHHHHHHHHHH
Confidence            699999999999977 67999999998754332 22345689999999999853        568899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHc-cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |++|..||.+............. ......+..+++.+.+++.+||..||.+|||+.++++  +.|+....
T Consensus       209 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--h~~~~~~~  277 (297)
T 3fxz_A          209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ--HQFLKIAK  277 (297)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CGGGGGCC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh--ChhhcccC
Confidence            99999999887765544333322 2233456678999999999999999999999999999  77766443

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=2e-29  Score=197.95  Aligned_cols=138  Identities=29%  Similarity=0.601  Sum_probs=112.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......+|+.|+|||++.+        ..++.++|||||||++
T Consensus       225 vHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DvwslG~il  295 (370)
T 2psq_A          225 IHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD--------RVYTHQSDVWSFGVLM  295 (370)
T ss_dssp             ECSCCCGGGEEECTT-CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT--------CCCCHHHHHHHHHHHH
T ss_pred             eccccchhhEEECCC-CCEEEccccCCcccCcccceecccCCCcccceECHhHhcC--------CCCCcHHHHHHHHHHH
Confidence            699999999999976 689999999997543322   1223457889999998853        5689999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |||++ |..||.+..... ..........+..|..+++++.+++.+||..||.+||++.++++.|+.++...
T Consensus       296 ~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~  366 (370)
T 2psq_A          296 WEIFTLGGSPYPGIPVEE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             HHHHTTSCCSSTTCCGGG-HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            99999 999998765432 33344455566778889999999999999999999999999999999987644

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.96  E-value=2.5e-29  Score=195.03  Aligned_cols=132  Identities=26%  Similarity=0.483  Sum_probs=107.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       127 vHrDlkp~NIll~~~-g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  197 (337)
T 1o6l_A          127 VYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--------NDYGRAVDWWGLGVVMYE  197 (337)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSS--------SCBCTTHHHHHHHHHHHH
T ss_pred             ecCcCCHHHEEECCC-CCEEEeeccchhhcccCCCcccccccChhhCChhhhcC--------CCCCchhhcccchhHHHH
Confidence            699999999999977 689999999997532 2233456789999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~  145 (198)
                      |++|..||.+.........  .......+|..+++++.+++.+||..||.+||     ++.++++  |.|+
T Consensus       198 ll~g~~Pf~~~~~~~~~~~--i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~--h~~f  264 (337)
T 1o6l_A          198 MMCGRLPFYNQDHERLFEL--ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME--HRFF  264 (337)
T ss_dssp             HHHSSCSSCCSSHHHHHHH--HHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT--SGGG
T ss_pred             HhcCCCCCCCCCHHHHHHH--HHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc--CCCc
Confidence            9999999987664332222  22345567888999999999999999999999     8999988  5554

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.96  E-value=2.2e-29  Score=199.18  Aligned_cols=141  Identities=26%  Similarity=0.323  Sum_probs=110.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+.+.+||+|||+++...........+||+.|+|||++.+       ...++.++||||+||++|||
T Consensus       163 vHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwSlG~il~el  235 (394)
T 4e7w_A          163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFG-------ATNYTTNIDIWSTGCVMAEL  235 (394)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTT-------CSSCCTHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcC-------CCCCCcHHHHHHHHHHHHHH
Confidence            69999999999984447899999999986544444456688999999998753       34589999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC------------------C---------CCCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR------------------P---------GLPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~------------------~---------~~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ++|..||.+................                  +         .++..+++++.+|+.+||..||.+|||
T Consensus       236 l~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (394)
T 4e7w_A          236 MQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT  315 (394)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC
Confidence            9999999987755443322211000                  0         023347899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCC
Q 029154          134 FSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~  150 (198)
                      +.++++  |.|+.....
T Consensus       316 ~~e~l~--hp~f~~~~~  330 (394)
T 4e7w_A          316 AIEALC--HPFFDELRT  330 (394)
T ss_dssp             HHHHHT--SGGGSTTTS
T ss_pred             HHHHhc--Chhhhhhcc
Confidence            999998  888776543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=1.6e-29  Score=199.81  Aligned_cols=135  Identities=24%  Similarity=0.444  Sum_probs=106.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC-cccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE-TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.. .........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       175 vHrDLKp~NILl~~~-g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~--------~~~~~~~DiwslGvllye  245 (396)
T 4dc2_A          175 IYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG--------EDYGFSVDWWALGVLMFE  245 (396)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             EeccCCHHHEEECCC-CCEEEeecceeeecccCCCccccccCCcccCCchhhcC--------CCCChHHHHHHHHHHHHH
Confidence            699999999999977 78999999999853 23334456789999999999854        568899999999999999


Q ss_pred             HHcCCCCCCCCCcH-------HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH------HHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNL-------QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF------SQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~------~~~l~~l~~~~~  146 (198)
                      |++|..||......       ..............+|..+++++.+|+.+||..||.+|+++      .++++  |.|+.
T Consensus       246 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~--Hpff~  323 (396)
T 4dc2_A          246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG--HPFFR  323 (396)
T ss_dssp             HHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH--STTTT
T ss_pred             HHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc--Ccccc
Confidence            99999999643211       11122333445667888899999999999999999999985      67776  55553

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=2.5e-29  Score=194.16  Aligned_cols=140  Identities=29%  Similarity=0.520  Sum_probs=110.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......+|..|+|||++.+        ..++.++||||||++
T Consensus       173 vH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~i  243 (325)
T 3kul_A          173 VHRDLAARNVLVDSN-LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF--------RTFSSASDVWSFGVV  243 (325)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHH--------CEECHHHHHHHHHHH
T ss_pred             eCCCCCcceEEECCC-CCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcC--------CCCCcHHHHHHHHHH
Confidence            699999999999976 689999999997543221    1122346778999999853        567899999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      +|++++ |..||.+..... ...........+.+..+++++.+++.+||..||.+||++.++++.|+.++.....
T Consensus       244 l~ell~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          244 MWEVLAYGERPYWNMTNRD-VISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             HHHHHTTSCCTTTTSCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             HHHHHcCCCCCcccCCHHH-HHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence            999998 999998766543 3344445556667788999999999999999999999999999999998765443

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=1.3e-29  Score=198.52  Aligned_cols=142  Identities=18%  Similarity=0.196  Sum_probs=106.9

Q ss_pred             CCCCCCCCCeEEc--CCCCceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLT--PDQKSLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~--~~~~~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      |||||||+|||++  .+ +.+||+|||+++.......        ....+||+.|+|||++.+        ..++.++||
T Consensus       174 iHrDlkp~Nill~~~~~-~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di  244 (364)
T 3op5_A          174 VHGDIKASNLLLNYKNP-DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG--------VAPSRRGDL  244 (364)
T ss_dssp             ECCCCCGGGEEEESSCT-TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT--------CCCCHHHHH
T ss_pred             EEecCCHHHEEEecCCC-CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC--------CCCCchhhH
Confidence            6999999999998  55 6799999999975432211        123459999999999853        568999999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCC---------CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---------LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      |||||++|||++|..||.+..................         .+..+++++.+++.+||..||.+||++.++++.|
T Consensus       245 ~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l  324 (364)
T 3op5_A          245 EILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDIL  324 (364)
T ss_dssp             HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999985332111111110000000         1246789999999999999999999999999999


Q ss_pred             HHHHhhcCCC
Q 029154          142 NAFLFTLRPP  151 (198)
Q Consensus       142 ~~~~~~~~~~  151 (198)
                      +.++......
T Consensus       325 ~~~~~~~~~~  334 (364)
T 3op5_A          325 LQGLKAIGSK  334 (364)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHcCCC
Confidence            9988766544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.96  E-value=8.5e-29  Score=195.05  Aligned_cols=142  Identities=29%  Similarity=0.577  Sum_probs=116.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......+|..|+|||++.+        ..++.++|||||||++
T Consensus       213 vH~Dlkp~NIll~~~-~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwslG~il  283 (382)
T 3tt0_A          213 IHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD--------RIYTHQSDVWSFGVLL  283 (382)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS--------CCCCHHHHHHHHHHHH
T ss_pred             ecCCCCcceEEEcCC-CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcC--------CCCCchhHHHHHHHHH
Confidence            799999999999976 679999999998543321   1233467889999999853        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~  152 (198)
                      |++++ |..||.+.... ..............+..+++++.+++.+||..||.+||++.+++++|+.++.......
T Consensus       284 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~  358 (382)
T 3tt0_A          284 WEIFTLGGSPYPGVPVE-ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE  358 (382)
T ss_dssp             HHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred             HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence            99999 99999876543 3344445556667788899999999999999999999999999999999987665443

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=2.2e-29  Score=192.79  Aligned_cols=136  Identities=24%  Similarity=0.319  Sum_probs=105.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+        ..++.++||||+||++|+|
T Consensus       142 vH~Dlkp~Nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~~l  212 (308)
T 3g33_A          142 VHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ--------STYATPVDMWSVGCIFAEM  212 (308)
T ss_dssp             CCSCCCTTTEEECTT-SCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHT--------SCCCSTHHHHHHHHHHHHT
T ss_pred             ccCCCCHHHEEEcCC-CCEEEeeCccccccCCCcccCCccccccccCchHHcC--------CCCCchHHHHHHHHHHHHH
Confidence            799999999999976 6899999999986554444455678999999999853        5688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCC-------------------------CCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPG-------------------------LPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|..||.+................+.                         ....+++.+.+|+.+||..||.+|||+.
T Consensus       213 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  292 (308)
T 3g33_A          213 FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF  292 (308)
T ss_dssp             TTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHH
Confidence            999999988765444322221111000                         1135788999999999999999999999


Q ss_pred             HHHHHHHHHHhh
Q 029154          136 QIIRMLNAFLFT  147 (198)
Q Consensus       136 ~~l~~l~~~~~~  147 (198)
                      ++++  |.|+..
T Consensus       293 e~l~--h~~~~~  302 (308)
T 3g33_A          293 RALQ--HSYLHK  302 (308)
T ss_dssp             HHHT--STTC--
T ss_pred             HHhc--CccccC
Confidence            9998  666543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=2.5e-29  Score=188.96  Aligned_cols=134  Identities=37%  Similarity=0.750  Sum_probs=104.6

Q ss_pred             CCCCCCCCCeEEcCC-------CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPD-------QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~-------~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~   73 (198)
                      +||||||+|||++.+       .+.+||+|||+++...... .....||+.|+|||.+.+        ..++.++|+||+
T Consensus       130 ~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~sl  200 (271)
T 3dtc_A          130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRA--------SMFSKGSDVWSY  200 (271)
T ss_dssp             CCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------CCGGGSCHHHHHH--------CCCSHHHHHHHH
T ss_pred             eecCCchHHEEEecccccccccCcceEEccCCccccccccc-ccCCCCccceeCHHHhcc--------CCCCchhhHHHH
Confidence            599999999999852       3679999999997543322 224578999999999853        567899999999


Q ss_pred             HHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           74 GIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      |+++|++++|..||.+...................+..+++.+.+++.+||..||.+||++.+++++|+.
T Consensus       201 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          201 GVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            9999999999999998776555555554555566778899999999999999999999999999998864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.5e-29  Score=193.67  Aligned_cols=142  Identities=27%  Similarity=0.348  Sum_probs=108.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+       ...++.++||||+||++|+
T Consensus       134 vH~Dlkp~Nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~e  205 (346)
T 1ua2_A          134 LHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG-------ARMYGVGVDMWAVGCILAE  205 (346)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTT-------CSCCCHHHHHHHHHHHHHH
T ss_pred             ECCCCCHHHEEEcCC-CCEEEEecccceeccCCcccCCcccccccccCchHhhC-------CCCCCchhhhHhHHHHHHH
Confidence            799999999999976 6899999999976533 223345678999999998753       3457899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC---C-----------------------CCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP---G-----------------------LPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~---~-----------------------~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      |++|.+||.+................+   .                       ....+++++.+|+.+||..||.+|||
T Consensus       206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  285 (346)
T 1ua2_A          206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  285 (346)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence            999999998876544433222211110   0                       01345789999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCC
Q 029154          134 FSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~~~  152 (198)
                      +.|+++  +.|+.....+.
T Consensus       286 ~~ell~--h~~f~~~~~~~  302 (346)
T 1ua2_A          286 ATQALK--MKYFSNRPGPT  302 (346)
T ss_dssp             HHHHHT--SGGGTSSSCCC
T ss_pred             HHHHhc--ChhhhcCCCCC
Confidence            999999  77876554443

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=9.2e-29  Score=189.47  Aligned_cols=140  Identities=32%  Similarity=0.663  Sum_probs=106.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.++..+||+|||++......  .....||+.|+|||++.+        ..++.++||||||+++|+|
T Consensus       127 vH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~il~el  196 (307)
T 2eva_A          127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEG--------SNYSEKCDVFSWGIILWEV  196 (307)
T ss_dssp             CCCCCSGGGEEEETTTTEEEECCCCC--------------CCTTSSCHHHHTC--------CCCCTHHHHHHHHHHHHHH
T ss_pred             ecCCCChhHEEEeCCCCEEEEcccccccccccc--cccCCCCCceEChhhhCC--------CCCCcHHHHHHHHHHHHHH
Confidence            799999999999877445899999998754322  234568999999999853        5688999999999999999


Q ss_pred             HcCCCCCCCCCcH-HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           81 LTNRLPFEGMSNL-QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        81 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ++|..||...... ............+..+..+++.+.+++.+||..||.+||++.++++.|+.+......
T Consensus       197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~  267 (307)
T 2eva_A          197 ITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG  267 (307)
T ss_dssp             HHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred             HHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence            9999999764332 222223334555666778999999999999999999999999999999988765543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.96  E-value=6.6e-30  Score=198.19  Aligned_cols=135  Identities=29%  Similarity=0.440  Sum_probs=108.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||++............+||+.|+|||++.+       ....+.++||||+|+++|+|
T Consensus       130 vH~Dlkp~NIll~~~-~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~l  201 (336)
T 3h4j_B          130 VHRDLKPENLLLDDN-LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING-------KLYAGPEVDVWSCGIVLYVM  201 (336)
T ss_dssp             CCCCCSTTTEEECTT-CCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCC-------SGGGCHHHHHHHHHHHHHHH
T ss_pred             EecCCchhhEEEcCC-CCEEEEEeccceeccCCcccccccCCcCcCCHHHHcC-------CCCCCCccchhHHHHHHHHH
Confidence            799999999999976 6899999999986655555567789999999999854       22236899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||.+......  ...........|..+++++.+++.+||..||.+|||+.++++  +.|+..
T Consensus       202 l~g~~Pf~~~~~~~~--~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~--hp~~~~  264 (336)
T 3h4j_B          202 LVGRLPFDDEFIPNL--FKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR--DPWFNV  264 (336)
T ss_dssp             HHSSCSSBCSSSTTC--BCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT--CHHHHT
T ss_pred             HhCCCCCCCccHHHH--HHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh--Chhhcc
Confidence            999999976442111  111123344567789999999999999999999999999999  777764

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.96  E-value=3.4e-29  Score=195.46  Aligned_cols=143  Identities=20%  Similarity=0.239  Sum_probs=110.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++...+.+||+|||+++............||+.|+|||++.+       ...++.++|||||||++|+|
T Consensus       153 vH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~Di~slG~il~el  225 (360)
T 3e3p_A          153 CHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG-------NQHYTTAVDIWSVGCIFAEM  225 (360)
T ss_dssp             BCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTT-------CSSCCTHHHHHHHHHHHHHH
T ss_pred             ecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcC-------CCCCCcHHHHHHHHHHHHHH
Confidence            69999999999996447899999999986655444456688999999998753       34578999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccC------------------------------CCCCCCCCcHHHHHHHHHhcccCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHA------------------------------RPGLPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      ++|..||.+...............                              ....+...++++.+|+.+||+.||.+
T Consensus       226 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  305 (360)
T 3e3p_A          226 MLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEE  305 (360)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGG
T ss_pred             HhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccc
Confidence            999999988765443322211100                              01112235788999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCCC
Q 029154          131 RPSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       131 Rps~~~~l~~l~~~~~~~~~~~  152 (198)
                      |||+.++++  |.|+.....+.
T Consensus       306 Rpt~~e~l~--hp~f~~~~~~~  325 (360)
T 3e3p_A          306 RMKPYEALC--HPYFDELHDPA  325 (360)
T ss_dssp             SCCHHHHTT--SGGGGGGGCTT
T ss_pred             cCCHHHHhc--CccccccCCcc
Confidence            999999999  88887665443

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=198.06  Aligned_cols=133  Identities=28%  Similarity=0.422  Sum_probs=103.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       146 vHrDlkp~NILl~~~-g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  216 (353)
T 3txo_A          146 IYRDLKLDNVLLDHE-GHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE--------MLYGPAVDWWAMGVLLYE  216 (353)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCCTTCBCSCC---------CCGGGCCHHHHHH--------HHCTTHHHHHHHHHHHHH
T ss_pred             cccCCCHHHEEECCC-CCEEEccccceeecccCCccccccCCCcCeEChhhcCC--------CCcCCccCCCcchHHHHH
Confidence            699999999999977 789999999997532 2233445689999999999854        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH------HHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF------SQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~------~~~l~~l~~~~~  146 (198)
                      |++|..||.+.........  +.......|..+++++.+++.+||..||.+||++      .++++  |.|+.
T Consensus       217 ll~G~~Pf~~~~~~~~~~~--i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~--hp~f~  285 (353)
T 3txo_A          217 MLCGHAPFEAENEDDLFEA--ILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR--HPFFK  285 (353)
T ss_dssp             HHHSSCSSCCSSHHHHHHH--HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT--SGGGT
T ss_pred             HHhCCCCCCCCCHHHHHHH--HHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh--CCccc
Confidence            9999999988765433222  2334556778899999999999999999999998      77887  55554

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=2.7e-29  Score=193.82  Aligned_cols=136  Identities=25%  Similarity=0.516  Sum_probs=108.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......|+..|+|||++.+        ..++.++||||+|+++
T Consensus       137 vH~Dikp~Nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l  207 (325)
T 3kex_A          137 VHRNLAARNVLLKSP-SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF--------GKYTHQSDVWSYGVTV  207 (325)
T ss_dssp             CCSCCSSTTEEESSS-SCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             CCCccchheEEECCC-CeEEECCCCcccccCcccccccccCCCCcccccChHHhcc--------CCCChhhHhHHhHHHH
Confidence            799999999999876 679999999998543222   2234567889999999853        5689999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++++ |..||.+...... ............+..++.++.+++.+||..||.+||++.+++++|+.+..
T Consensus       208 ~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          208 WELMTFGAEPYAGLRLAEV-PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             HHHHTTSCCTTTTSCTTHH-HHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHHhCCCCCccccCHHHH-HHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            99999 9999987654332 23333444566677788999999999999999999999999999988754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=5.8e-29  Score=188.54  Aligned_cols=135  Identities=33%  Similarity=0.647  Sum_probs=107.5

Q ss_pred             CCCCCCCCCeEEcCCCC----ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK----SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~----~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.++.    .+||+|||+++....  ......||+.|+|||++..      ....++.++||||+|++
T Consensus       146 vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~------~~~~~~~~~Di~slG~~  217 (287)
T 4f0f_A          146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGA------EEESYTEKADTYSFAMI  217 (287)
T ss_dssp             BCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSC------SSCEECHHHHHHHHHHH
T ss_pred             ecCCCCcceEEEeccCCCCceeEEeCCCCccccccc--cccccCCCccccCchhhcc------CCCCcCchhhHHHHHHH
Confidence            69999999999986521    299999999975433  2345679999999999743      23456889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHH--HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQA--AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      +|++++|..||........  ..........+..+..+++++.+++.+||..||.+||++.++++.|+.
T Consensus       218 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          218 LYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            9999999999976553222  222333455667788899999999999999999999999999998864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=4.4e-29  Score=197.85  Aligned_cols=139  Identities=22%  Similarity=0.404  Sum_probs=100.1

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+  .+.+||+|||+++...........+||+.|+|||++.+        ..++.++|||||||++|
T Consensus       183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~  254 (400)
T 1nxk_A          183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP--------EKYDKSCDMWSLGVIMY  254 (400)
T ss_dssp             ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCC--------CCSSSHHHHHHHHHHHH
T ss_pred             cccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCC--------CCCCCcccHHHHHHHHH
Confidence            699999999999862  36799999999986554444456789999999999853        57889999999999999


Q ss_pred             HHHcCCCCCCCCCcHH----HHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           79 ELLTNRLPFEGMSNLQ----AAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~----~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +|++|..||.+.....    ............+  ....+++++.+|+.+||..||.+|||+.++++  +.|+....
T Consensus       255 ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~--hp~~~~~~  329 (400)
T 1nxk_A          255 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN--HPWIMQST  329 (400)
T ss_dssp             HHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--SHHHHTTT
T ss_pred             HHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc--CccccCCC
Confidence            9999999997654211    1111111222221  22468999999999999999999999999999  77776433

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=1e-28  Score=188.25  Aligned_cols=137  Identities=23%  Similarity=0.346  Sum_probs=104.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... .......||+.|+|||++.+..     ...++.++||||+|+++|+
T Consensus       159 vH~Dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~Di~slG~~l~~  232 (298)
T 2zv2_A          159 IHRDIKPSNLLVGED-GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR-----KIFSGKALDVWAMGVTLYC  232 (298)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTC-----CCEESHHHHHHHHHHHHHH
T ss_pred             eccCCCHHHEEECCC-CCEEEecCCCccccccccccccCCcCCccccChhhhccCC-----CCCCCchhhhHhHHHHHHH
Confidence            699999999999976 67999999999754332 2234568999999999985310     0113678999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |++|..||.+.................+....+++++.+++.+||..||.+||++.++++  +.|+
T Consensus       233 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~--hp~~  296 (298)
T 2zv2_A          233 FVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL--HPWV  296 (298)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT--CHHH
T ss_pred             HHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc--Cccc
Confidence            999999998766433322222222233334568999999999999999999999999998  5554

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=4.7e-29  Score=200.63  Aligned_cols=138  Identities=33%  Similarity=0.558  Sum_probs=112.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .....++..|+|||++..        ..++.++||||||+++|
T Consensus       306 vHrDlkp~Nill~~~-~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~~l~  376 (454)
T 1qcf_A          306 IHRDLRAANILVSAS-LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF--------GSFTIKSDVWSFGILLM  376 (454)
T ss_dssp             CCSSCSGGGEEECTT-CCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEECCC-CcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhcc--------CCCCcHHHHHhHHHHHH
Confidence            799999999999976 6899999999986543221  223456789999999853        56899999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ||++ |..||.+...... ..........+.|..+++++.+++.+||..||.+|||+.++++.|+.+....
T Consensus       377 el~t~g~~P~~~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          377 EIVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             HHHTTSCCSSTTCCHHHH-HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             HHHhCCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence            9999 9999988765433 3334445566678889999999999999999999999999999998875433

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.96  E-value=5.2e-29  Score=199.93  Aligned_cols=133  Identities=26%  Similarity=0.472  Sum_probs=107.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++||||+||++||
T Consensus       271 iHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  341 (446)
T 4ejn_A          271 VYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED--------NDYGRAVDWWGLGVVMYE  341 (446)
T ss_dssp             CCCCCCGGGEEECSS-SCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHT--------SCCCTHHHHHHHHHHHHH
T ss_pred             EECCCCHHHEEECCC-CCEEEccCCCceeccCCCcccccccCCccccCHhhcCC--------CCCCCccchhhhHHHHHH
Confidence            799999999999976 689999999997532 2233456789999999999853        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      |++|..||.+..........  ......+|..+++++.+|+.+||..||.+||     ++.++++  |.|+.
T Consensus       342 ll~g~~Pf~~~~~~~~~~~i--~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~--hp~f~  409 (446)
T 4ejn_A          342 MMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ--HRFFA  409 (446)
T ss_dssp             HHHSSCSSCCSSHHHHHHHH--HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT--SGGGT
T ss_pred             HhhCCCCCCCCCHHHHHHHH--HhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh--Ccccc
Confidence            99999999876654333222  2344567788999999999999999999999     9999998  66654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=4.2e-29  Score=192.92  Aligned_cols=136  Identities=26%  Similarity=0.508  Sum_probs=108.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....+|..|+|||++.+        ..++.++||||||+++
T Consensus       139 vH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il  209 (327)
T 3poz_A          139 VHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--------RIYTHQSDVWSYGVTV  209 (327)
T ss_dssp             CCSCCCGGGEEEEET-TEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             eCCCCChheEEECCC-CCEEEccCcceeEccCCcccccccCCCccccccChHHhcc--------CCCCchhhhhhhHHHH
Confidence            799999999999976 6899999999974332211   223456889999999854        6689999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||.+..... .............+..++.++.+++.+||..||.+||++.+++++|+.+..
T Consensus       210 ~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          210 WELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHTTSCCTTTTCCGGG-HHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHhcCCCCccCCCHHH-HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            99999 999998765433 223334445566777899999999999999999999999999999988754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=6.7e-29  Score=193.74  Aligned_cols=132  Identities=27%  Similarity=0.477  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       143 vHrDlkp~NIll~~~-g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  213 (353)
T 2i0e_A          143 IYRDLKLDNVMLDSE-GHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY--------QPYGKSVDWWAFGVLLYE  213 (353)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT--------CCBSTHHHHHHHHHHHHH
T ss_pred             EeccCCHHHEEEcCC-CcEEEEeCCcccccccCCcccccccCCccccChhhhcC--------CCcCCcccccchHHHHHH
Confidence            699999999999977 689999999997532 2233456789999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~  145 (198)
                      |++|..||.+....... .. +......+|..+++++.+|+.+||..||.+||+     +.++++  |.|+
T Consensus       214 ll~G~~Pf~~~~~~~~~-~~-i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~--h~~f  280 (353)
T 2i0e_A          214 MLAGQAPFEGEDEDELF-QS-IMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE--HAFF  280 (353)
T ss_dssp             HHHSSCSSCCSSHHHHH-HH-HHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT--SGGG
T ss_pred             HHcCCCCCCCCCHHHHH-HH-HHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc--Cccc
Confidence            99999999876643332 22 223455678889999999999999999999995     577777  4554

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.96  E-value=8.3e-29  Score=192.93  Aligned_cols=136  Identities=29%  Similarity=0.455  Sum_probs=108.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....   ...+||+.|+|||++.+.     ....++.++|||||||++|||
T Consensus       176 vH~Dlkp~NIll~~~-~~~kL~DfG~a~~~~~~---~~~~gt~~y~aPE~~~~~-----~~~~~~~~~DiwslG~il~el  246 (348)
T 1u5q_A          176 IHRDVKAGNILLSEP-GLVKLGDFGSASIMAPA---NSFVGTPYWMAPEVILAM-----DEGQYDGKVDVWSLGITCIEL  246 (348)
T ss_dssp             BCCCCSGGGEEEETT-TEEEECCCTTCBSSSSB---CCCCSCGGGCCHHHHHTT-----SSCCBCTHHHHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEECCC-CCEEEeeccCceecCCC---CcccCCcceeCHhhhccc-----cCCCCCcHHHHHHHHHHHHHH
Confidence            699999999999976 78999999999754432   346799999999987421     135678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||.+...............+...+..+++.+.+++.+||..||.+||++.++++  +.|+..
T Consensus       247 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~--h~~~~~  311 (348)
T 1u5q_A          247 AERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK--HRFVLR  311 (348)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT--CHHHHS
T ss_pred             HhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh--Chhhhc
Confidence            99999998877655544443333333445678999999999999999999999999999  666554

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.96  E-value=1.2e-28  Score=197.50  Aligned_cols=136  Identities=22%  Similarity=0.348  Sum_probs=106.0

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+  ++.+||+|||+++..... ......+||+.|+|||++.+        ..++.++||||+||++
T Consensus       132 vHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~--------~~~~~~~DIwSlGvil  203 (444)
T 3soa_A          132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK--------DPYGKPVDLWACGVIL  203 (444)
T ss_dssp             BCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHH
T ss_pred             cccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcC--------CCCCCccccHHHHHHH
Confidence            699999999999842  357999999999755432 22345689999999999853        5688999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |+|++|..||.+.................+  ....+++++.+|+.+||..||.+||++.++++  +.|+.
T Consensus       204 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~--hp~~~  272 (444)
T 3soa_A          204 YILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK--HPWIS  272 (444)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH--SCTTH
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc--Ccccc
Confidence            999999999987665443333222222222  22468999999999999999999999999999  66654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.96  E-value=4.3e-29  Score=195.39  Aligned_cols=134  Identities=21%  Similarity=0.300  Sum_probs=106.7

Q ss_pred             CCCCCCCCCeEEcCCCC---ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK---SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.++.   .+||+|||+++...........+||+.|+|||++.+        ..++.++|+||+||++
T Consensus       137 vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil  208 (361)
T 2yab_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY--------EPLGLEADMWSIGVIT  208 (361)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTT--------CCCCTHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcC--------CCCCccccHHHHHHHH
Confidence            69999999999986632   699999999986655444556789999999999853        5688999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCC----CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |+|++|..||.+...........  .....+    +..+++++.+|+.+||..||.+|||+.++++  +.|+.
T Consensus       209 ~~ll~g~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~  277 (361)
T 2yab_A          209 YILLSGASPFLGDTKQETLANIT--AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR--HPWIT  277 (361)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHH--TTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT--STTTS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHH--hcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc--CcCcC
Confidence            99999999998866543322222  222222    2568899999999999999999999999998  55543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=1.2e-28  Score=188.87  Aligned_cols=139  Identities=31%  Similarity=0.532  Sum_probs=112.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++.......   .....||+.|+|||++.+        ..++.++||||+|+++
T Consensus       167 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  237 (313)
T 1t46_A          167 IHRDLAARNILLTHG-RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN--------CVYTFESDVWSYGIFL  237 (313)
T ss_dssp             CCSCCSGGGEEEETT-TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ecCCCccceEEEcCC-CCEEEccccccccccccccceeccCCCCcceeeChHHhcC--------CCCChHHHHHHHHHHH
Confidence            699999999999976 7899999999975443221   223456788999998753        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |+|++ |..||.+...................+..++.++.+++.+||..||.+||++.+++++|+..+...
T Consensus       238 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          238 WELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            99998 999998766544444444445555667789999999999999999999999999999999887643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=7.5e-29  Score=188.71  Aligned_cols=142  Identities=16%  Similarity=0.224  Sum_probs=107.7

Q ss_pred             CCCCCCCCCeEEcCCC----CceEEecccCcccCcccc--------cccCCCCccceecccccccccccccccCCCCchh
Q 029154            1 MGKFMKEDNLLLTPDQ----KSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV   68 (198)
Q Consensus         1 iH~dlKp~NIll~~~~----~~~kl~DfGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~   68 (198)
                      |||||||+|||++.++    ..+||+|||+++......        ......||+.|+|||++.+        ..++.++
T Consensus       128 vH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~  199 (298)
T 1csn_A          128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG--------REQSRRD  199 (298)
T ss_dssp             ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--------CCCCHHH
T ss_pred             ecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcC--------CCCChHH
Confidence            6999999999998552    239999999997543321        1234579999999999853        5679999


Q ss_pred             hHHHHHHHHHHHHcCCCCCCCCCc--HHHHHHHHH----ccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           69 DVYSFGIVLWELLTNRLPFEGMSN--LQAAYAAAF----KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        69 Dvws~G~~l~e~~~g~~p~~~~~~--~~~~~~~~~----~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||||||+++|+|++|..||.+...  .........    ..........+++++.+++.+||..||.+||++.++++.|+
T Consensus       200 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~  279 (298)
T 1csn_A          200 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  279 (298)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence            999999999999999999987432  111111111    11112233468899999999999999999999999999999


Q ss_pred             HHHhhcCC
Q 029154          143 AFLFTLRP  150 (198)
Q Consensus       143 ~~~~~~~~  150 (198)
                      .++.....
T Consensus       280 ~~~~~~~~  287 (298)
T 1csn_A          280 KVLERLNT  287 (298)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            98876553

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=6.7e-29  Score=194.41  Aligned_cols=137  Identities=24%  Similarity=0.381  Sum_probs=107.2

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.++  ..+||+|||++............+||+.|+|||++.+        ..++.++||||+||++|
T Consensus       150 vH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~  221 (362)
T 2bdw_A          150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK--------DPYSKPVDIWACGVILY  221 (362)
T ss_dssp             BCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTT--------CCCCTHHHHHHHHHHHH
T ss_pred             EeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHcc--------CCCCchhhHHHHHHHHH
Confidence            6999999999998542  3599999999986655444456789999999999853        56889999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +|++|..||.+.................+.  ...+++++.+|+.+||..||.+||++.++++  +.|+..
T Consensus       222 ~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~~  290 (362)
T 2bdw_A          222 ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK--VPWICN  290 (362)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT--SHHHHT
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc--CcccCC
Confidence            999999999876654333222222222222  2357899999999999999999999999998  666653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.1e-28  Score=190.77  Aligned_cols=136  Identities=26%  Similarity=0.516  Sum_probs=105.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....+|..|+|||++.+        ..++.++||||+|+++
T Consensus       139 vH~Dikp~NIl~~~~-~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il  209 (327)
T 3lzb_A          139 VHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--------RIYTHQSDVWSYGVTV  209 (327)
T ss_dssp             CCSCCCGGGEEEEET-TEEEECCTTC----------------CCCGGGSCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEcCC-CCEEEccCcceeEccCccccccccCCCccccccCHHHHcC--------CCCChHHHHHHHHHHH
Confidence            799999999999866 6899999999975432221   223456788999999854        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++++ |..||.+...... ............+..++.++.+++.+||..||.+||++.++++.|+.+..
T Consensus       210 ~ell~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          210 WELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHTTSCCTTTTCCGGGH-HHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCCCCCCCHHHH-HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            99999 9999987664332 23334455566778899999999999999999999999999999998864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=8.2e-29  Score=187.32  Aligned_cols=137  Identities=28%  Similarity=0.578  Sum_probs=101.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||+++.......  .....+++.|+|||++.+        ..++.++|+||+|+++|
T Consensus       138 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  208 (281)
T 1mp8_A          138 VHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF--------RRFTSASDVWMFGVCMW  208 (281)
T ss_dssp             CCSCCSGGGEEEEET-TEEEECC-------------------CCGGGCCHHHHHH--------CCCSHHHHHHHHHHHHH
T ss_pred             ecccccHHHEEECCC-CCEEECccccccccCcccccccccCCCcccccChhhccc--------CCCCCccCchHHHHHHH
Confidence            799999999999966 6899999999975543222  123356788999999853        56789999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++++ |..||.+...... ............+..+++++.+++.+||..||.+||++.++++.|+.++..
T Consensus       209 ell~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          209 EILMHGVKPFQGVKNNDV-IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             HHHTTSCCTTTTCCGGGH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCcCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            9996 9999987664332 233334455667788999999999999999999999999999999988654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.96  E-value=1.6e-29  Score=203.80  Aligned_cols=136  Identities=24%  Similarity=0.398  Sum_probs=99.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+        ..|+.++||||+||++|||
T Consensus       186 iHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~el  256 (464)
T 3ttj_A          186 IHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEM  256 (464)
T ss_dssp             CCCCCCGGGEEECTT-SCEEECCCCCC-----CCCC----CCCTTCCHHHHTT--------CCCCTTHHHHHHHHHHHHH
T ss_pred             ccCCCChHhEEEeCC-CCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcC--------CCCCHHHHHHHHHHHHHHH
Confidence            799999999999976 6899999999986655444556789999999999864        5688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC--------------------CCC---------CCC-----------CcHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR--------------------PGL---------PED-----------ISPDLAFIV  120 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~---------p~~-----------~~~~~~~l~  120 (198)
                      ++|+.||.+................                    +..         +..           .++++.+|+
T Consensus       257 l~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl  336 (464)
T 3ttj_A          257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL  336 (464)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHH
Confidence            9999999987654433222111000                    000         000           156789999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154          121 QSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      .+||..||.+|||++|+++  |.|+..
T Consensus       337 ~~mL~~dP~~R~ta~e~L~--Hp~~~~  361 (464)
T 3ttj_A          337 SKMLVIDPAKRISVDDALQ--HPYINV  361 (464)
T ss_dssp             HHHSCSSTTTSCCHHHHHT--STTTGG
T ss_pred             HHHcCCChhhCCCHHHHhc--Chhhhh
Confidence            9999999999999999999  777653

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3.6e-29  Score=194.32  Aligned_cols=139  Identities=30%  Similarity=0.509  Sum_probs=111.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||++........   .....||+.|+|||++.+        ..++.++||||||+++
T Consensus       194 vH~Dikp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il  264 (344)
T 1rjb_A          194 VHRDLAARNVLVTHG-KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE--------GIYTIKSDVWSYGILL  264 (344)
T ss_dssp             EETTCSGGGEEEETT-TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEEcCC-CcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc--------CCCChhHhHHHHHHHH
Confidence            699999999999976 6899999999975432211   223456788999998753        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |+|++ |..||.+................+..+..+++++.+++.+||..||.+||++.+++++|+.++...
T Consensus       265 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          265 WEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence            99998 999998766544444444555566677889999999999999999999999999999999876543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.96  E-value=8.7e-29  Score=189.97  Aligned_cols=139  Identities=27%  Similarity=0.407  Sum_probs=104.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... ......+||+.|+|||++.+       ...++.++||||+||++|+
T Consensus       141 vH~Dikp~NIl~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~  212 (311)
T 3niz_A          141 LHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG-------SKKYSTSVDIWSIGCIFAE  212 (311)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTT-------CCSCCTHHHHHHHHHHHHH
T ss_pred             ccCCCchHhEEECCC-CCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcC-------CCCCCchHHhHHHHHHHHH
Confidence            699999999999977 67999999999754322 22345678999999998753       3567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHH--HccCCCC--------------------------CCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAA--FKHARPG--------------------------LPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~--~~~~~~~--------------------------~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|..||.+...........  .....+.                          ....+++++.+|+.+||..||.+|
T Consensus       213 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  292 (311)
T 3niz_A          213 MITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR  292 (311)
T ss_dssp             HHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTS
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHC
Confidence            999999998765433322211  1111110                          113467899999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcC
Q 029154          132 PSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~  149 (198)
                      ||+.++++  +.|+....
T Consensus       293 pt~~ell~--hp~f~~~~  308 (311)
T 3niz_A          293 ISARDAMN--HPYFKDLD  308 (311)
T ss_dssp             CCHHHHHT--SGGGTTSC
T ss_pred             CCHHHHhc--CcccccCC
Confidence            99999999  77766543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.96  E-value=1.1e-28  Score=189.87  Aligned_cols=141  Identities=23%  Similarity=0.376  Sum_probs=107.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... ......+||+.|+|||++.+       ...++.++||||+||++|+
T Consensus       130 vH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~e  201 (317)
T 2pmi_A          130 LHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG-------SRTYSTSIDIWSCGCILAE  201 (317)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTT-------CCCCCTHHHHHHHHHHHHH
T ss_pred             eeCCCChHHeEEcCC-CCEEECcCccceecCCCcccCCCCcccccccCchHhhC-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999976 67999999999754322 22345678999999999753       3467899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHH--ccCC------------------------------CCCCCCCcHHHHHHHHHhcccC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAF--KHAR------------------------------PGLPEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~--~~~~------------------------------~~~p~~~~~~~~~l~~~~l~~d  127 (198)
                      |++|..||.+............  ....                              +..+..+++++.+|+.+||..|
T Consensus       202 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  281 (317)
T 2pmi_A          202 MITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLN  281 (317)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSS
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCC
Confidence            9999999988765443322211  0000                              0112357889999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhhcCCC
Q 029154          128 PNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      |.+|||+.++++  +.|+......
T Consensus       282 P~~Rpt~~e~l~--hp~f~~~~~~  303 (317)
T 2pmi_A          282 PDMRLSAKQALH--HPWFAEYYHH  303 (317)
T ss_dssp             GGGSCCHHHHTT--SGGGGGGCC-
T ss_pred             cccCCCHHHHhC--Chhhhcccch
Confidence            999999999999  7887765544

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=4.1e-29  Score=194.41  Aligned_cols=133  Identities=27%  Similarity=0.478  Sum_probs=107.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       140 vHrDlkp~NIll~~~-g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  210 (345)
T 1xjd_A          140 VYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG--------QKYNHSVDWWSFGVLLYE  210 (345)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             EeCCCChhhEEECCC-CCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcC--------CCCCChhhhHHHHHHHHH
Confidence            699999999999977 689999999997532 2223456789999999999853        568899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS-QIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~-~~l~~l~~~~~  146 (198)
                      |++|..||.+.........  .....+..|..+++++.+++.+||..||.+||++. ++++  |.|+.
T Consensus       211 ll~g~~Pf~~~~~~~~~~~--i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~--hp~f~  274 (345)
T 1xjd_A          211 MLIGQSPFHGQDEEELFHS--IRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ--HPLFR  274 (345)
T ss_dssp             HHHSSCSSCCSSHHHHHHH--HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG--SGGGT
T ss_pred             HhcCCCCCCCCCHHHHHHH--HHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc--Ccccc
Confidence            9999999987665333222  23345567788999999999999999999999997 7876  55543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=1.4e-28  Score=194.40  Aligned_cols=144  Identities=24%  Similarity=0.426  Sum_probs=104.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccc---cccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQ---GEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~---~~~~~~~~~~Dvws~G   74 (198)
                      |||||||+|||++ + +.+||+|||+++......   .....+||+.|+|||++.+.....   .....++.++||||||
T Consensus       177 vHrDlkp~NIll~-~-~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlG  254 (390)
T 2zmd_A          177 VHSDLKPANFLIV-D-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  254 (390)
T ss_dssp             CCCCCCGGGEEES-S-SCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHH
T ss_pred             eecCCCHHHEEEE-C-CeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHH
Confidence            7999999999996 4 579999999998553322   223567999999999975310000   0013578999999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHc-cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++|+|++|..||............... ......|...+.++.+|+.+||..||.+||++.++++  +.|+...
T Consensus       255 vil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~--hp~~~~~  327 (390)
T 2zmd_A          255 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA--HPYVQIQ  327 (390)
T ss_dssp             HHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHSC
T ss_pred             HHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh--CcCcccc
Confidence            9999999999999876544333333322 3344567778899999999999999999999999999  6666543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=7.5e-29  Score=195.08  Aligned_cols=136  Identities=32%  Similarity=0.545  Sum_probs=109.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc---cCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM---TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++........   ....++..|+|||++..        ..++.++||||||+++
T Consensus       235 vHrDlkp~Nil~~~~-~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~il  305 (377)
T 3cbl_A          235 IHRDLAARNCLVTEK-NVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY--------GRYSSESDVWSFGILL  305 (377)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHH--------CEEEHHHHHHHHHHHH
T ss_pred             CCcccCHHHEEEcCC-CcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhcc--------CCCCchhhHHHHHHHH
Confidence            699999999999976 68999999999754332211   11235678999999853        4578899999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ |..||.+...... ..........+.|..+++++.+++.+||..||.+|||+.++++.|+.+..
T Consensus       306 ~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          306 WETFSLGASPYPNLSNQQT-REFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HHHHTTSCCSSTTSCHHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            99998 9999988765433 33344555667788899999999999999999999999999999988754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=2.5e-28  Score=197.13  Aligned_cols=136  Identities=24%  Similarity=0.369  Sum_probs=110.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+       ....+.++||||+||++|+|
T Consensus       138 vHrDLkp~NIll~~~-~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwSlGvil~el  209 (476)
T 2y94_A          138 VHRDLKPENVLLDAH-MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG-------RLYAGPEVDIWSSGVILYAL  209 (476)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTT-------CCBCSHHHHHHHHHHHHHHH
T ss_pred             CcccccHHHEEEecC-CCeEEEeccchhhccccccccccCCCcCeEChhhccC-------CCCCCCcceehhhHHHHHHH
Confidence            699999999999976 6799999999986655445566789999999999854       22346899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ++|..||.+....... .. ........|..+++++.+|+.+||..||.+|||+.++++  +.|+...
T Consensus       210 ltG~~Pf~~~~~~~~~-~~-i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~--hp~~~~~  273 (476)
T 2y94_A          210 LCGTLPFDDDHVPTLF-KK-ICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE--HEWFKQD  273 (476)
T ss_dssp             HHSSCSSCCSSSHHHH-HH-HHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT--CHHHHTT
T ss_pred             hhCCCCCCCCCHHHHH-HH-HhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh--CHHhhhc
Confidence            9999999876653332 22 223445667789999999999999999999999999999  6776643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=9e-29  Score=189.72  Aligned_cols=139  Identities=27%  Similarity=0.549  Sum_probs=112.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||+++......   ......||+.|+|||++.+        ..++.++||||+|+++
T Consensus       170 ~H~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il  240 (316)
T 2xir_A          170 IHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--------RVYTIQSDVWSFGVLL  240 (316)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccccCccceEEECCC-CCEEECCCccccccccCccceeccCCCcceeecCchhhcc--------ccccchhHHHHHHHHH
Confidence            799999999999866 679999999997543221   1223457889999999853        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++++ |..||.+...................+..+++++.+++.+||..||.+||++.+++++|+.++...
T Consensus       241 ~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             HHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            99998 999998766444444444455566677889999999999999999999999999999999887643

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=9.3e-29  Score=192.42  Aligned_cols=135  Identities=24%  Similarity=0.442  Sum_probs=105.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       132 vHrDlkp~NIll~~~-g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  202 (345)
T 3a8x_A          132 IYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG--------EDYGFSVDWWALGVLMFE  202 (345)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             eecCCCHHHEEECCC-CCEEEEeccccccccCCCCcccccCCCccccCccccCC--------CCCChHHhHHHHHHHHHH
Confidence            699999999999976 689999999997532 2233456789999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcH-------HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH------HHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNL-------QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF------SQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~------~~~l~~l~~~~~  146 (198)
                      |++|..||......       ..............+|..+++++.+++.+||..||.+||++      .++++  |.|+.
T Consensus       203 ll~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~--hp~f~  280 (345)
T 3a8x_A          203 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG--HPFFR  280 (345)
T ss_dssp             HHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT--SGGGT
T ss_pred             HHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc--CCccC
Confidence            99999999652111       11122223345566788899999999999999999999985      67776  55554

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=6.9e-29  Score=194.64  Aligned_cols=138  Identities=25%  Similarity=0.495  Sum_probs=110.1

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.++  ..+||+|||+++.....   .......||+.|+|||++.+        ..++.++|||||||
T Consensus       203 vHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DvwslG~  274 (367)
T 3l9p_A          203 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME--------GIFTSKTDTWSFGV  274 (367)
T ss_dssp             CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHH--------CCCCHHHHHHHHHH
T ss_pred             eCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcC--------CCCCcHHHHHHHHH
Confidence            7999999999998442  35999999999743221   11223467889999999853        56899999999999


Q ss_pred             HHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           76 VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        76 ~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|||++ |..||.+..... .............+..+++.+.+|+.+||..||.+||++.+++++|+.+...
T Consensus       275 il~ellt~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          275 LLWEIFSLGYMPYPSKSNQE-VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             HHHHHHTTSCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            9999998 999998766533 3344445555667788999999999999999999999999999999887653

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.95  E-value=9.2e-29  Score=197.63  Aligned_cols=136  Identities=24%  Similarity=0.273  Sum_probs=102.8

Q ss_pred             CCCCCCCCCeEEcCCCCc--eEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKS--LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~--~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.  +||+|||+++....  .....+||+.|+|||++.+        ..++.++|||||||++|
T Consensus       222 vHrDlKp~NILl~~~-~~~~vkL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~  290 (429)
T 3kvw_A          222 IHCDLKPENILLKQQ-GRSGIKVIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILG--------ARYGMPIDMWSLGCILA  290 (429)
T ss_dssp             ECSCCSGGGEEESST-TSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHHT--------BCCCTHHHHHHHHHHHH
T ss_pred             ecCCCCHHHeEEccC-CCcceEEeecccceecCC--cccccCCCCCccChHHHhC--------CCCCchHHHHhHHHHHH
Confidence            699999999999976 44  99999999975432  2345689999999999854        56899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC----------------------------------------------------
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP----------------------------------------------------  106 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------------------------------  106 (198)
                      ||++|..||.+................+                                                    
T Consensus       291 elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (429)
T 3kvw_A          291 ELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPES  370 (429)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccc
Confidence            9999999998876544332211100000                                                    


Q ss_pred             -----CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          107 -----GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       107 -----~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                           .++...++++.+|+.+||..||.+|||+.|+++  +.|+....
T Consensus       371 ~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~--Hpw~~~~~  416 (429)
T 3kvw_A          371 REWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR--HPWLRRRL  416 (429)
T ss_dssp             SCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT--STTTC---
T ss_pred             hhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC--ChhhccCC
Confidence                 011234788999999999999999999999999  77766543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=1.1e-28  Score=194.42  Aligned_cols=139  Identities=25%  Similarity=0.341  Sum_probs=108.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+.+.+||+|||+++............||+.|+|||++.+       ...++.++||||+||++|+|
T Consensus       163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~el  235 (383)
T 3eb0_A          163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLG-------ATEYTPSIDLWSIGCVFGEL  235 (383)
T ss_dssp             ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTT-------CSSCCTHHHHHHHHHHHHHH
T ss_pred             ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcC-------CCCCCcchhhhhHHHHHHHH
Confidence            69999999999985447899999999986554444456688999999998753       34589999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCC---------------------------CCCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARP---------------------------GLPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ++|..||.+................+                           .++..+++++.+|+.+||..||.+|||
T Consensus       236 l~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (383)
T 3eb0_A          236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN  315 (383)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            99999999877655443322110100                           134567899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhc
Q 029154          134 FSQIIRMLNAFLFTL  148 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~  148 (198)
                      +.|+++  |.|+...
T Consensus       316 ~~e~l~--hp~f~~~  328 (383)
T 3eb0_A          316 PYEAMA--HPFFDHL  328 (383)
T ss_dssp             HHHHHT--SGGGHHH
T ss_pred             HHHHhc--CHHHHHH
Confidence            999998  6666543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.95  E-value=1.4e-28  Score=193.70  Aligned_cols=133  Identities=26%  Similarity=0.423  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++...     ....++.++|+||+||++|+|
T Consensus       137 vHrDlkp~NIll~~~-g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~~~~~DiwSlG~il~el  210 (384)
T 4fr4_A          137 IHRDMKPDNILLDEH-GHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR-----KGAGYSFAVDWWSLGVTAYEL  210 (384)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCC-----SSCCBCTTHHHHHHHHHHHHH
T ss_pred             eeccCcHHHeEECCC-CCEEEeccceeeeccCCCceeccCCCccccCCeeeccC-----CCCCCCccceeechHHHHHHH
Confidence            699999999999977 68999999999866555555677899999999998530     124578899999999999999


Q ss_pred             HcCCCCCCCCCcH-HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 029154           81 LTNRLPFEGMSNL-QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-FSQIIR  139 (198)
Q Consensus        81 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-~~~~l~  139 (198)
                      ++|..||...... ...............|..+++++.+|+.+||..||.+||+ ++++++
T Consensus       211 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          211 LRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            9999999754321 1122223344556678889999999999999999999998 777776

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.95  E-value=1.5e-28  Score=186.83  Aligned_cols=141  Identities=18%  Similarity=0.251  Sum_probs=107.2

Q ss_pred             CCCCCCCCCeEE---cCCCCceEEecccCcccCcccc--------cccCCCCccceecccccccccccccccCCCCchhh
Q 029154            1 MGKFMKEDNLLL---TPDQKSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVD   69 (198)
Q Consensus         1 iH~dlKp~NIll---~~~~~~~kl~DfGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~D   69 (198)
                      |||||||+|||+   +.+ +.+||+|||+++......        ......||+.|+|||++.+        ..++.++|
T Consensus       127 vH~Dlkp~NIl~~~~~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~D  197 (296)
T 4hgt_A          127 IHRDVKPDNFLMGLGKKG-NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG--------IEQSRRDD  197 (296)
T ss_dssp             ECSCCSGGGEEECCGGGT-TCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT--------CCCCHHHH
T ss_pred             ecCCCCHHHeeeeccCCC-CeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcC--------CCCCchhH
Confidence            699999999999   544 679999999997543321        1234578999999999853        56889999


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCcH------HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           70 VYSFGIVLWELLTNRLPFEGMSNL------QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        70 vws~G~~l~e~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      |||+||++|++++|..||.+....      ..................+++++.+++.+||..||.+||++.++++.|+.
T Consensus       198 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (296)
T 4hgt_A          198 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             HHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence            999999999999999999764321      11111111111112235678999999999999999999999999999999


Q ss_pred             HHhhcCC
Q 029154          144 FLFTLRP  150 (198)
Q Consensus       144 ~~~~~~~  150 (198)
                      ++.....
T Consensus       278 ~~~~~~~  284 (296)
T 4hgt_A          278 LFHRQGF  284 (296)
T ss_dssp             HHHHHTC
T ss_pred             HHHHhCC
Confidence            8876653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.95  E-value=1.1e-28  Score=187.59  Aligned_cols=139  Identities=22%  Similarity=0.325  Sum_probs=103.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... .......||+.|+|||++.+       ...++.++||||+||++|+
T Consensus       123 vH~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~  194 (292)
T 3o0g_A          123 LHRDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-------AKLYSTSIDMWSAGCIFAE  194 (292)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTT-------CSCCCTHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCC-CCEEEeecccceecCCccccccCCccccCCcChHHHcC-------CCCcCchHHHHHHHHHHHH
Confidence            699999999999977 67999999999754322 23345678999999999853       3447899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-CC---------------------------CCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-AR---------------------------PGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|..||................ ..                           ......+++++.+|+.+||..||.+|
T Consensus       195 l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  274 (292)
T 3o0g_A          195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR  274 (292)
T ss_dssp             HTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhC
Confidence            998887754444433332222110 00                           01123478899999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcC
Q 029154          132 PSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~  149 (198)
                      ||++|+++  +.|+....
T Consensus       275 ~t~~e~l~--hp~f~~~~  290 (292)
T 3o0g_A          275 ISAEEALQ--HPYFSDFC  290 (292)
T ss_dssp             CCHHHHHT--SGGGTTC-
T ss_pred             CCHHHHhc--CcccccCC
Confidence            99999999  77765433

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=1.7e-28  Score=189.00  Aligned_cols=139  Identities=27%  Similarity=0.528  Sum_probs=106.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....+++.|+|||++.+        ..++.++||||+||++
T Consensus       159 vH~Dikp~NIli~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  229 (323)
T 3qup_A          159 IHRDLAARNCMLAED-MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLAD--------NLYTVHSDVWAFGVTM  229 (323)
T ss_dssp             CCSCCSGGGEEECTT-SCEEECCCCC-----------------CCGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccCCCCcceEEEcCC-CCEEEeeccccccccccccccccccccCcccccCchhhcC--------CCCCCccchhhHHHHH
Confidence            799999999999976 6899999999975433221   123356788999999853        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |++++ |..||.+...... ............+..+++++.+++.+||..||.+||++.++++.|+.++....
T Consensus       230 ~ell~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          230 WEIMTRGQTPYAGIENAEI-YNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             HHHHTTSCCTTTTCCGGGH-HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             HHHHhCCCCCccccChHHH-HHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence            99999 8999987665433 33344455566778899999999999999999999999999999999876443

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.95  E-value=1.7e-28  Score=186.54  Aligned_cols=142  Identities=18%  Similarity=0.251  Sum_probs=107.2

Q ss_pred             CCCCCCCCCeEEc--CCCCceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLT--PDQKSLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~--~~~~~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      +||||||+|||++  .+++.+||+|||+++.......        .....||+.|+|||++.+        ..++.++||
T Consensus       127 vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di  198 (296)
T 3uzp_A          127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG--------IEQSRRDDL  198 (296)
T ss_dssp             ECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT--------CCCCHHHHH
T ss_pred             eeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcC--------CCCCcchhh
Confidence            6999999999994  2336799999999975433221        234578999999999853        568899999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCc------HHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMSN------LQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~------~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ||||+++|++++|..||.+...      ................+..+++++.+++.+||..||.+||++.++++.|+.+
T Consensus       199 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          199 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            9999999999999999976432      1111111111111123356889999999999999999999999999999998


Q ss_pred             HhhcCC
Q 029154          145 LFTLRP  150 (198)
Q Consensus       145 ~~~~~~  150 (198)
                      ......
T Consensus       279 ~~~~~~  284 (296)
T 3uzp_A          279 FHRQGF  284 (296)
T ss_dssp             HHHTTC
T ss_pred             HHhcCC
Confidence            776554

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=1.2e-28  Score=206.47  Aligned_cols=133  Identities=26%  Similarity=0.474  Sum_probs=108.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+||||+.+ +++||+|||+++... ........+||+.|+|||++.+        ..|+.++|+||||+++||
T Consensus       464 iHrDLKp~NILl~~~-g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~~~~~~DvwSlGvilye  534 (674)
T 3pfq_A          464 IYRDLKLDNVMLDSE-GHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY--------QPYGKSVDWWAFGVLLYE  534 (674)
T ss_dssp             ECCCCCSTTEEECSS-SCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTC--------CCBSTHHHHHHHHHHHHH
T ss_pred             EeccCChhhEEEcCC-CcEEEeecceeeccccCCcccccccCCCcccCHhhhcC--------CCCCccceEechHHHHHH
Confidence            699999999999977 789999999998532 2333456789999999999853        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF-----SQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~-----~~~l~~l~~~~~  146 (198)
                      |++|..||.+....... . .+......+|..+++++.+|+.+||..||.+|+++     +++++  |.|+.
T Consensus       535 lltG~~Pf~~~~~~~~~-~-~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~--h~ff~  602 (674)
T 3pfq_A          535 MLAGQAPFEGEDEDELF-Q-SIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE--HAFFR  602 (674)
T ss_dssp             HHHSSCSSCCSSHHHHH-H-HHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS--SGGGS
T ss_pred             HHcCCCCCCCCCHHHHH-H-HHHhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc--Ccccc
Confidence            99999999986654332 2 23345567788899999999999999999999997     77776  55543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=9.2e-29  Score=187.53  Aligned_cols=140  Identities=21%  Similarity=0.427  Sum_probs=99.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++............||+.|+|||++....    ....++.++|+||+|+++|++
T Consensus       132 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~~~~~Di~slG~il~~l  206 (290)
T 3fme_A          132 IHRDVKPSNVLINAL-GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPEL----NQKGYSVKSDIWSLGITMIEL  206 (290)
T ss_dssp             CCCCCSGGGCEECTT-CCEEBCCC---------------CCCCCCSCHHHHSCCT----TC--CCHHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCC-CCEEEeecCCcccccccccccccCCCccccChhhcChhh----cCcCCCcHHHHHHHHHHHHHH
Confidence            799999999999976 679999999997655444444457999999999963200    135678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||..................+.. +..+++++.+++.+||..||.+|||+.++++  +.|+..
T Consensus       207 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~--hp~f~~  272 (290)
T 3fme_A          207 AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ--HPFFTL  272 (290)
T ss_dssp             HHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT--SHHHHH
T ss_pred             HHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh--Cccccc
Confidence            9999999875544444444444444433 3568999999999999999999999999999  666654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=4.8e-28  Score=184.23  Aligned_cols=141  Identities=29%  Similarity=0.483  Sum_probs=111.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +||||||+|||++.+ +.+||+|||+++......     ......++..|+|||.+.+        ..++.++|+||+|+
T Consensus       146 ~H~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~  216 (298)
T 3pls_A          146 VHRDLAARNCMLDES-FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT--------YRFTTKSDVWSFGV  216 (298)
T ss_dssp             CCSCCSGGGEEECTT-CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTT--------CCCCHHHHHHHHHH
T ss_pred             ccCCCCcceEEEcCC-CcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhcc--------CCCChhhchhhHHH
Confidence            699999999999966 689999999997543221     1233467889999999853        56789999999999


Q ss_pred             HHHHHHcCCCC-CCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           76 VLWELLTNRLP-FEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        76 ~l~e~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      ++|+|++|..| |..... ...............+..+++.+.+++.+||..||.+|||+.++++.|+.++......
T Consensus       217 il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~  292 (298)
T 3pls_A          217 LLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD  292 (298)
T ss_dssp             HHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred             HHHHHhhCCCCCCccCCH-HHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence            99999995554 544333 3333444445556677889999999999999999999999999999999998876543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.95  E-value=4.1e-29  Score=194.32  Aligned_cols=136  Identities=20%  Similarity=0.256  Sum_probs=101.5

Q ss_pred             CCCCCCCCCeEEcCCC-CceEEecccCcccCcccc--------cccCCCCccceecccccccccccccccCCCCchhhHH
Q 029154            1 MGKFMKEDNLLLTPDQ-KSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVY   71 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-~~~kl~DfGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvw   71 (198)
                      |||||||+|||++.++ +.+||+|||+++......        ......||..|+|||++.+        ..++.++|||
T Consensus       173 vH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~  244 (345)
T 2v62_A          173 VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG--------VALSRRSDVE  244 (345)
T ss_dssp             ECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT--------CCCCHHHHHH
T ss_pred             eCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC--------CCCCchhhHH
Confidence            6999999999998652 279999999997543221        1134578999999999853        5689999999


Q ss_pred             HHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC---------CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           72 SFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP---------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        72 s~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||||++|||++|..||.+...................+         ..+++++.+++.+||..||.+||++.++++.|+
T Consensus       245 slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~  324 (345)
T 2v62_A          245 ILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN  324 (345)
T ss_dssp             HHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence            99999999999999996532211111111111111112         268899999999999999999999999999887


Q ss_pred             HH
Q 029154          143 AF  144 (198)
Q Consensus       143 ~~  144 (198)
                      ..
T Consensus       325 ~~  326 (345)
T 2v62_A          325 PH  326 (345)
T ss_dssp             TT
T ss_pred             cc
Confidence            64

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.95  E-value=1.4e-28  Score=197.61  Aligned_cols=134  Identities=28%  Similarity=0.566  Sum_probs=108.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++......  ....++..|+|||++.+        ..++.++||||||+++|||
T Consensus       311 vHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~--~~~~~~~~y~aPE~~~~--------~~~~~~sDvwslG~~l~el  379 (450)
T 1k9a_A          311 VHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALRE--------KKFSTKSDVWSFGILLWEI  379 (450)
T ss_dssp             ECSCCCGGGEEECTT-SCEEECCCTTCEECC--------CCCTTTSCHHHHHS--------SCCCHHHHHHHHHHHHHHH
T ss_pred             eCCCCCHhhEEECCC-CCEEEeeCCCcccccccc--cCCCCCcceeCHHHhcC--------CCCCcHHHHHHHHHHHHHH
Confidence            699999999999976 689999999997543221  23357889999999853        5689999999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++ |..||.+...... ........+...|..+++++.+++.+||..||.+||++.++++.|+.+..
T Consensus       380 ~t~g~~P~~~~~~~~~-~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          380 YSFGRVPYPRIPLKDV-VPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             HTTTCCSSTTSCTTTH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCCHHHH-HHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            98 9999987654332 23344556677788899999999999999999999999999999988754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=2e-28  Score=187.87  Aligned_cols=137  Identities=28%  Similarity=0.446  Sum_probs=99.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    .....+||+.|+|||++.+        ..++.++||||+|++
T Consensus       138 vH~dlkp~Nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~~  208 (311)
T 3ork_A          138 IHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG--------DSVDARSDVYSLGCV  208 (311)
T ss_dssp             CCCCCCGGGEEEETT-SCEEECCCSCC------------------CCTTCCHHHHHT--------CCCCHHHHHHHHHHH
T ss_pred             CcCCCCHHHEEEcCC-CCEEEeeccCcccccccccccccccccCcCcccCCHHHhcC--------CCCCchHhHHHHHHH
Confidence            799999999999976 679999999997543221    1233568999999999853        568899999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +|+|++|..||.+................+.  .+..+++++.+++.+||..||.+||++.+++.  +.+....
T Consensus       209 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~--~~l~~~~  280 (311)
T 3ork_A          209 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR--ADLVRVH  280 (311)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH--HHHHHHH
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH--HHHHHHh
Confidence            9999999999988776554444333322221  23558999999999999999999998777766  5554433

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=4.5e-28  Score=201.28  Aligned_cols=141  Identities=24%  Similarity=0.520  Sum_probs=112.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++.......    .....+++.|+|||++..        ..++.++|||||||+
T Consensus       458 iHrDlkp~NILl~~~-~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~--------~~~~~~sDvwSlGv~  528 (613)
T 2ozo_A          458 VHRNLAARNVLLVNR-HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF--------RKFSSRSDVWSYGVT  528 (613)
T ss_dssp             CCSCCSGGGEEEEET-TEEEECCCSTTTTCC--------------CCTTSCHHHHHH--------CCCCHHHHHHHHHHH
T ss_pred             EcCcCCHHHEEEcCC-CcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcC--------CCCCcHHHHHHHHHH
Confidence            799999999999966 7899999999986432221    112345678999999853        578999999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      +|||++ |..||.+...... ........+...|..+++++.+++.+||..||.+||++.++++.|+.+.......
T Consensus       529 l~ellt~G~~Pf~~~~~~~~-~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~  603 (613)
T 2ozo_A          529 MWEALSYGQKPYKKMKGPEV-MAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  603 (613)
T ss_dssp             HHHHHTTSCCTTTTCCSHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHCCCCCCCCCCHHHH-HHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence            999998 9999998776443 3344455666778889999999999999999999999999999999987766543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=1.8e-28  Score=197.13  Aligned_cols=140  Identities=30%  Similarity=0.515  Sum_probs=109.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .....++..|+|||++..        ..++.++||||||+++|
T Consensus       302 vHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDvwslG~~l~  372 (452)
T 1fmk_A          302 VHRDLRAANILVGEN-LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTIKSDVWSFGILLT  372 (452)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCCTTC--------------CCGGGSCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             eCCCCChhhEEECCC-CCEEECCCccceecCCCceecccCCcccccccCHhHHhc--------CCCCccccHHhHHHHHH
Confidence            799999999999866 6799999999985433221  123456789999998853        56899999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      |+++ |..||.+...... ........+.+.|..+++.+.+++.+||..||.+|||+.++++.|+.+.....+
T Consensus       373 el~t~g~~P~~~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~  444 (452)
T 1fmk_A          373 ELTTKGRVPYPGMVNREV-LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  444 (452)
T ss_dssp             HHHTTTCCSSTTCCHHHH-HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             HHHhCCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence            9999 9999988765433 334445556677888999999999999999999999999999999988655443

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.95  E-value=1.3e-28  Score=186.93  Aligned_cols=136  Identities=25%  Similarity=0.379  Sum_probs=100.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++.... ........||+.|+|||++.+       ...++.++|+||+||++|+
T Consensus       122 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~  193 (288)
T 1ob3_A          122 LHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG-------SKKYSTTIDIWSVGCIFAE  193 (288)
T ss_dssp             CCSCCCGGGEEECTT-SCEEECCTTHHHHHCC---------CCCTTCCHHHHTT-------CCSCCTHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCC-CCEEEeECccccccCccccccccccccccccCchheeC-------CCCCCcHHHHHHHHHHHHH
Confidence            799999999999976 6799999999874332 122344578999999999753       3457899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC---------------------------CCCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP---------------------------GLPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      |++|..||.+................+                           .....+++++.+++.+||..||.+||
T Consensus       194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  273 (288)
T 1ob3_A          194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI  273 (288)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence            999999998876544332221110000                           01234789999999999999999999


Q ss_pred             CHHHHHHHHHHHHh
Q 029154          133 SFSQIIRMLNAFLF  146 (198)
Q Consensus       133 s~~~~l~~l~~~~~  146 (198)
                      |+.++++  +.|+.
T Consensus       274 t~~e~l~--hp~f~  285 (288)
T 1ob3_A          274 TAKQALE--HAYFK  285 (288)
T ss_dssp             CHHHHHT--SGGGG
T ss_pred             CHHHHhc--Ccchh
Confidence            9999998  55543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=2.4e-28  Score=185.49  Aligned_cols=139  Identities=27%  Similarity=0.557  Sum_probs=100.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++....   ........||+.|+|||++...     ....++.++||||+|+++
T Consensus       142 ~H~Dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~Di~slG~il  215 (289)
T 3og7_A          142 IHRDLKSNNIFLHED-NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ-----DSNPYSFQSDVYAFGIVL  215 (289)
T ss_dssp             CCSCCCGGGEEEETT-TEEEECCCC------------------CCCTTCCHHHHC---------CCSCHHHHHHHHHHHH
T ss_pred             ccccCccceEEECCC-CCEEEccceeccccccccccccccccCCCccccCchhhccc-----CCCCCCcccchHHHHHHH
Confidence            699999999999976 6899999999874332   2223345789999999987420     135678899999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCC----CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARP----GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |++++|..||.+.................    ..+..+++++.+++.+||..||.+||++.++++.|+.+.
T Consensus       216 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          216 YELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            99999999998876655443333322221    234568899999999999999999999999999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=5e-29  Score=191.28  Aligned_cols=129  Identities=26%  Similarity=0.373  Sum_probs=98.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............||+.|+|||++.         +.++.++|||||||++||+
T Consensus       179 vH~Dikp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~el  248 (311)
T 3p1a_A          179 VHLDVKPANIFLGPR-GRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ---------GSYGTAADVFSLGLTILEV  248 (311)
T ss_dssp             ECCCCSGGGEEECGG-GCEEECCCTTCEECC------CCCCCGGGCCGGGGG---------TCCSTHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCC-CCEEEccceeeeecccCCCCcccCCCccccCHhHhc---------CCCCchhhHHHHHHHHHHH
Confidence            699999999999876 679999999997655444445567999999999874         3578999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHc-cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFK-HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|..++.+....    ..... ...+..+..+++++.+++.+||..||.+||++.++++  +.|+
T Consensus       249 ~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~--hp~~  308 (311)
T 3p1a_A          249 ACNMELPHGGEGW----QQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA--LPVL  308 (311)
T ss_dssp             HHTCCCCSSHHHH----HHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT--SGGG
T ss_pred             HhCCCCCCCccHH----HHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh--Cccc
Confidence            9997776543221    11111 1222335668999999999999999999999999998  5554

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.95  E-value=1.7e-28  Score=192.76  Aligned_cols=136  Identities=24%  Similarity=0.350  Sum_probs=106.9

Q ss_pred             CCCCCCCCCeEEc-CCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLT-PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~-~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||+. .+.+.+||+|||+++...........+||+.|+|||++.+        ..++.++|||||||++|+
T Consensus       209 vH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  280 (373)
T 2x4f_A          209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY--------DFVSFPTDMWSVGVIAYM  280 (373)
T ss_dssp             ECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTT--------CBCCHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccC--------CCCCcHHhHHHHHHHHHH
Confidence            6999999999994 2336799999999986655444556689999999998853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++|..||.+.................  .....+++++.+|+.+||..||.+||++.++++  +.|+.
T Consensus       281 lltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~--hp~~~  347 (373)
T 2x4f_A          281 LLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK--HPWLS  347 (373)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--SHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc--CcCcC
Confidence            999999998876544433332222221  123468999999999999999999999999999  56654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=4e-28  Score=182.40  Aligned_cols=136  Identities=29%  Similarity=0.555  Sum_probs=110.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||+++......  ......++..|+|||++.+        ..++.++|+||+|+++|
T Consensus       128 ~H~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  198 (269)
T 4hcu_A          128 IHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKSDVWSFGVLMW  198 (269)
T ss_dssp             CCSCCCGGGEEECGG-GCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             ecCCcchheEEEcCC-CCEEeccccccccccccccccccCcccccccCCHHHhcC--------CCCCchhhhHHHHHHHH
Confidence            699999999999866 679999999997543322  2233456788999999853        56889999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++++ |..||.+..... .............+...++++.+++.+||..||.+||++.+++++|+.+..
T Consensus       199 ~ll~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          199 EVFSEGKIPYENRSNSE-VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCCCCCHHH-HHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            9999 899998766433 334444455666677889999999999999999999999999999988764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.95  E-value=7.1e-28  Score=195.25  Aligned_cols=140  Identities=26%  Similarity=0.414  Sum_probs=108.3

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++..  .+.+||+|||+++...........+||+.|+|||++.         +.++.++||||+||++|
T Consensus       143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~  213 (486)
T 3mwu_A          143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR---------GTYDEKCDVWSAGVILY  213 (486)
T ss_dssp             CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGG---------SCCCHHHHHHHHHHHHH
T ss_pred             EeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhC---------CCCCchhhHHHHHHHHH
Confidence            799999999999632  2469999999998655544455678999999999984         35889999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      +|++|..||.+...................+  ..+++++.+|+.+||..||.+|||+.++++  +.|+......
T Consensus       214 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~--hp~~~~~~~~  286 (486)
T 3mwu_A          214 ILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE--HPWIQKYSSE  286 (486)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH--CHHHHHTCCC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc--CHhhccCccc
Confidence            9999999998876544433333222222222  457899999999999999999999999999  7787765433

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.95  E-value=1.8e-28  Score=191.15  Aligned_cols=137  Identities=26%  Similarity=0.356  Sum_probs=98.1

Q ss_pred             CCCCCCCCCeEEcC--CCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTP--DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~--~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.  +.+.+||+|||+++...........+||+.|+|||++.+        ..++.++|||||||++|
T Consensus       170 vH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~  241 (349)
T 2w4o_A          170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG--------CAYGPEVDMWSVGIITY  241 (349)
T ss_dssp             CCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTT--------CCCCTHHHHHHHHHHHH
T ss_pred             EecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcC--------CCCCcccchHHHHHHHH
Confidence            79999999999974  236799999999986554444455689999999999853        56889999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCC---CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHAR---PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +|++|..||.+................   .+....++.++.+|+.+||..||.+||++.++++  +.|+..
T Consensus       242 ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~~~~  311 (349)
T 2w4o_A          242 ILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ--HPWVTG  311 (349)
T ss_dssp             HHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--STTTTS
T ss_pred             HHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc--CcccCC
Confidence            999999999876655434333333222   1223568899999999999999999999999999  666543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=3.2e-28  Score=189.12  Aligned_cols=143  Identities=24%  Similarity=0.435  Sum_probs=103.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceeccccccccccccc---ccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQG---EKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~---~~~~~~~~~Dvws~G   74 (198)
                      |||||||+|||++ + +.+||+|||+++......   .....+||+.|+|||++.+......   ....++.++||||||
T Consensus       130 iHrDikp~NIll~-~-~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG  207 (343)
T 3dbq_A          130 VHSDLKPANFLIV-D-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  207 (343)
T ss_dssp             CCCCCCGGGEEEE-T-TEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHH
T ss_pred             ecCCCCcceEEEE-C-CcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHH
Confidence            7999999999997 4 579999999998553322   1234579999999999743110000   015678899999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHH-ccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAF-KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++|+|++|..||.............. .......|...+.++.+++.+||..||.+|||+.++++  +.|+..
T Consensus       208 ~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~--hp~~~~  279 (343)
T 3dbq_A          208 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA--HPYVQI  279 (343)
T ss_dssp             HHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHS
T ss_pred             HHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh--Cccccc
Confidence            999999999999987655433333332 23444667778899999999999999999999999999  666654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.95  E-value=2.6e-28  Score=187.04  Aligned_cols=137  Identities=26%  Similarity=0.558  Sum_probs=110.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......+++.|+|||++.+        ..++.++||||+|+++
T Consensus       172 vH~dikp~NIli~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  242 (314)
T 2ivs_A          172 VHRDLAARNILVAEG-RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD--------HIYTTQSDVWSFGVLL  242 (314)
T ss_dssp             ECCCCSGGGEEEETT-TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH--------CEECHHHHHHHHHHHH
T ss_pred             cccccchheEEEcCC-CCEEEccccccccccccccceeccCCCCcccccChhhhcC--------CCcCchhhHHHHHHHH
Confidence            699999999999966 789999999997543221   1223457889999998853        4578999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+|++ |..||.+..... .............+..+++++.+++.+||..||.+||++.+++++|+.++..
T Consensus       243 ~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          243 WEIVTLGGNPYPGIPPER-LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHTTSCCSSTTCCGGG-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHhCCCCCCCCCCHHH-HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            99999 999998766433 2333344455667788999999999999999999999999999999988653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=5.6e-29  Score=191.89  Aligned_cols=137  Identities=18%  Similarity=0.229  Sum_probs=107.2

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ .+.+||+|||+++............||+.|+|||++.+        ..++.++|+||+|+++|+
T Consensus       124 vH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~~  195 (321)
T 1tki_A          124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH--------DVVSTATDMWSLGTLVYV  195 (321)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT--------CEECHHHHHHHHHHHHHH
T ss_pred             CcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcC--------CCCCchhhHHHHHHHHHH
Confidence            699999999999862 36799999999986544444445678999999999853        457899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++|..||.+..................  ....+++++.+++.+||..||.+|||+.++++  +.|+..
T Consensus       196 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~--hp~~~~  263 (321)
T 1tki_A          196 LLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ--HPWLKQ  263 (321)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--SHHHHS
T ss_pred             HHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc--Chhhcc
Confidence            9999999988665443322222222111  12468899999999999999999999999999  777764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.95  E-value=2.4e-28  Score=188.11  Aligned_cols=131  Identities=25%  Similarity=0.414  Sum_probs=107.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ....+||+.|+|||++.+        ..++.++|+||+||++|||
T Consensus       128 vHrDlkp~NIll~~~-g~~kL~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~el  196 (318)
T 1fot_A          128 IYRDLKPENILLDKN-GHIKITDFGFAKYVPDV--TYTLCGTPDYIAPEVVST--------KPYNKSIDWWSFGILIYEM  196 (318)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCSSCEECSSC--BCCCCSCTTTCCHHHHTT--------CCBCTTHHHHHHHHHHHHH
T ss_pred             cccCCChheEEEcCC-CCEEEeecCcceecCCc--cccccCCccccCHhHhcC--------CCCCcccchhhhHHHHHHH
Confidence            699999999999976 68999999999764432  245689999999999853        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      ++|..||.+...........  ......|..+++++.+++.+||..||.+|+     +++++++  |.|+.
T Consensus       197 l~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~--hp~f~  263 (318)
T 1fot_A          197 LAGYTPFYDSNTMKTYEKIL--NAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN--HPWFK  263 (318)
T ss_dssp             HHSSCTTCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT--SGGGS
T ss_pred             HhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc--Ccccc
Confidence            99999998766543332222  334567788999999999999999999999     8999988  55553

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.4e-28  Score=189.99  Aligned_cols=136  Identities=20%  Similarity=0.300  Sum_probs=105.7

Q ss_pred             CCCCCCCCCeEEcCCCC---ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK---SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.++.   .+||+|||+++...........+||+.|+|||++.+        ..++.++|+||+||++
T Consensus       136 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il  207 (326)
T 2y0a_A          136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY--------EPLGLEADMWSIGVIT  207 (326)
T ss_dssp             ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTT--------CCCCTHHHHHHHHHHH
T ss_pred             EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecC--------CCCCcHHHHHHHHHHH
Confidence            69999999999986531   699999999986554444456689999999999853        5688999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |+|++|..||.+.................  ..+..+++.+.+|+.+||..||.+|||+.++++  +.|+.
T Consensus       208 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~~~  276 (326)
T 2y0a_A          208 YILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ--HPWIK  276 (326)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH--STTTS
T ss_pred             HHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc--CCCcc
Confidence            99999999998766543332222111111  112467899999999999999999999999998  55543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=1.7e-28  Score=190.32  Aligned_cols=137  Identities=28%  Similarity=0.510  Sum_probs=109.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......+|..|+|||++.+        ..++.++|+||||+++
T Consensus       196 vH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il  266 (343)
T 1luf_A          196 VHRDLATRNCLVGEN-MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY--------NRYTTESDVWAYGVVL  266 (343)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ecCCCCcceEEECCC-CeEEEeecCCCcccccCccccccCCCcccceecChhhhcc--------CCcCcccccHHHHHHH
Confidence            799999999999966 679999999987433221   1233567889999998853        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+|++ |..||.+...... ............+..+++++.+++.+||..||.+||++.+++++|+.+...
T Consensus       267 ~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          267 WEIFSYGLQPYYGMAHEEV-IYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             HHHHTTTCCTTTTSCHHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             HHHHhcCCCcCCCCChHHH-HHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            99998 9999987665333 333444555567788999999999999999999999999999999887543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.2e-28  Score=192.13  Aligned_cols=140  Identities=30%  Similarity=0.531  Sum_probs=103.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-----ccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++.......     .....++..|+|||++.+        ..++.++||||||+
T Consensus       214 vHrDlkp~NIll~~~-~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwSlG~  284 (373)
T 3c1x_A          214 VHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGV  284 (373)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECCC---------------------CCGGGSCHHHHHH--------CCCCHHHHHHHHHH
T ss_pred             ecCccchheEEECCC-CCEEEeeccccccccccccccccccCCCCCcccccChHHhcC--------CCCCcHHHHHHHHH
Confidence            799999999999976 6899999999975432211     123456788999999853        56889999999999


Q ss_pred             HHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           76 VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        76 ~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ++||+++ |.+||.+...... ............|..+++.+.+++.+||..||.+||++.++++.|+.++.....
T Consensus       285 il~ellt~~~~p~~~~~~~~~-~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~  359 (373)
T 3c1x_A          285 LLWELMTRGAPPYPDVNTFDI-TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  359 (373)
T ss_dssp             HHHHHHTTSCCSCTTSCSSCH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHhCcCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence            9999999 6778876544322 223344455566788999999999999999999999999999999998876553

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.95  E-value=3.9e-28  Score=183.56  Aligned_cols=137  Identities=26%  Similarity=0.501  Sum_probs=107.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||++........  .....++..|+|||++.+        ..++.++|+||||+++|
T Consensus       135 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~  205 (281)
T 3cc6_A          135 VHRDIAVRNILVASP-ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF--------RRFTTASDVWMFAVCMW  205 (281)
T ss_dssp             CCCCCSGGGEEEEET-TEEEECCCCGGGCC---------CCCCCGGGCCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             ccCCCccceEEECCC-CcEEeCccCCCcccccccccccccCCCCcceeCchhhcc--------CCCCchhccHHHHHHHH
Confidence            699999999999966 6899999999975443221  223456889999998853        56889999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++++ |..||........ ............+..+++.+.+++.+||..||.+||++.+++++|+.+...
T Consensus       206 ~llt~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          206 EILSFGKQPFFWLENKDV-IGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             HHHTTTCCTTTTSCGGGH-HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCcccCChHHH-HHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence            9998 9999976554332 223333455566778999999999999999999999999999999887653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.95  E-value=2.7e-28  Score=191.58  Aligned_cols=124  Identities=23%  Similarity=0.377  Sum_probs=101.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCc-ccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREET-VTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +++||+|||+++... ........+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       161 vHrDlkp~NIll~~~-g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  231 (373)
T 2r5t_A          161 VYRDLKPENILLDSQ-GHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK--------QPYDRTVDWWCLGAVLYE  231 (373)
T ss_dssp             CCCCCCGGGEEECTT-SCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTT--------CCCCTHHHHHHHHHHHHH
T ss_pred             eecCCCHHHEEECCC-CCEEEeeCccccccccCCCccccccCCccccCHHHhCC--------CCCCchhhhHHHHHHHHH
Confidence            799999999999977 689999999997532 2233455689999999999853        568899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      |++|..||.+....... ... ......++..++.++.+++.+||..||.+||++.
T Consensus       232 ll~G~~Pf~~~~~~~~~-~~i-~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          232 MLYGLPPFYSRNTAEMY-DNI-LNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             HHHSSCTTCCSBHHHHH-HHH-HHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             HHcCCCCCCCCCHHHHH-HHH-HhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            99999999876543332 222 2344566778999999999999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.95  E-value=1.3e-28  Score=190.42  Aligned_cols=138  Identities=29%  Similarity=0.488  Sum_probs=111.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....||..|+|||++.+        ..++.++||||||+++
T Consensus       186 vH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  256 (333)
T 2i1m_A          186 IHRDVAARNVLLTNG-HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD--------CVYTVQSDVWSYGILL  256 (333)
T ss_dssp             ECSCCSGGGCEEEGG-GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccCCcccceEEECCC-CeEEECccccccccccccceeecCCCCCCccccCHHHhcc--------CCCChHHHHHHHHHHH
Confidence            699999999999966 6899999999975432211   223456788999998753        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+|++ |..||.+...................+..+++++.+++.+||..||.+||++.+++++|+.....
T Consensus       257 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          257 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            99998 89999876654444444444555666777899999999999999999999999999999887653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=2.7e-28  Score=185.60  Aligned_cols=138  Identities=22%  Similarity=0.407  Sum_probs=105.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......++..|+|||++.+        ..++.++||||+|++
T Consensus       136 vH~Dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~  206 (295)
T 3ugc_A          136 IHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE--------SKFSVASDVWSFGVV  206 (295)
T ss_dssp             CCSCCSGGGEEEEET-TEEEECCCCSCC-------------CTTCGGGGCCHHHHHH--------CCCCHHHHHHHHHHH
T ss_pred             ccCCCCHhhEEEcCC-CeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcC--------CCCChHHHHHHHHHH
Confidence            799999999999976 789999999997543321    1223457788999999854        568999999999999


Q ss_pred             HHHHHcCCCCCCCCCcH---------------HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNL---------------QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~---------------~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +|++++|..|+......               .............+.+..+++++.+++.+||..||.+|||+.++++.|
T Consensus       207 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L  286 (295)
T 3ugc_A          207 LYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV  286 (295)
T ss_dssp             HHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence            99999999887532110               011222334455667788999999999999999999999999999999


Q ss_pred             HHHHhh
Q 029154          142 NAFLFT  147 (198)
Q Consensus       142 ~~~~~~  147 (198)
                      +.+...
T Consensus       287 ~~l~~~  292 (295)
T 3ugc_A          287 DQIRDN  292 (295)
T ss_dssp             HHHHHC
T ss_pred             HHHHHh
Confidence            987654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=5.9e-28  Score=189.36  Aligned_cols=138  Identities=25%  Similarity=0.366  Sum_probs=107.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ....+||+.|+|||++.+       ...++.++|+||+||++|||
T Consensus       150 vH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~el  219 (367)
T 1cm8_A          150 IHRDLKPGNLAVNED-CELKILDFGLARQADSE--MTGYVVTRWYRAPEVILN-------WMRYTQTVDIWSVGCIMAEM  219 (367)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEECCSS--CCSSCSCGGGCCTHHHHT-------TTCCCTTHHHHHHHHHHHHH
T ss_pred             cccCcCHHHEEEcCC-CCEEEEeeecccccccc--cCcCcCCCCcCCHHHHhC-------CCCCChhhhHHHHHHHHHHH
Confidence            699999999999976 67999999999864432  345688999999998753       25688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC-----------------------------CCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR-----------------------------PGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|+.||.+................                             .......++++.+|+.+||..||.+|
T Consensus       220 l~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R  299 (367)
T 1cm8_A          220 ITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQR  299 (367)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHC
Confidence            9999999887654433222111000                             01234578999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCC
Q 029154          132 PSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~  150 (198)
                      ||+.++++  |.|+.....
T Consensus       300 ~t~~e~l~--hp~f~~~~~  316 (367)
T 1cm8_A          300 VTAGEALA--HPYFESLHD  316 (367)
T ss_dssp             CCHHHHHH--SGGGTTTC-
T ss_pred             CCHHHHhc--ChHHHhhcC
Confidence            99999999  777765543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=3.6e-28  Score=187.33  Aligned_cols=135  Identities=30%  Similarity=0.491  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++..... .......||+.|+|||++.+        ..++.++||||+|+++|+
T Consensus       163 vH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~il~e  233 (321)
T 2c30_A          163 IHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR--------SLYATEVDIWSLGIMVIE  233 (321)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCC-CcEEEeeeeeeeecccCccccccccCCccccCHhhhcC--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 67999999998754332 22345689999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++|..||.+....... ........+.  .+..+++.+.+++.+||..||.+||++.++++  +.|+..
T Consensus       234 l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~--hp~~~~  300 (321)
T 2c30_A          234 MVDGEPPYFSDSPVQAM-KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD--HPFLLQ  300 (321)
T ss_dssp             HHHSSCTTTTSCHHHHH-HHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT--SGGGGG
T ss_pred             HHhCCCCCCCCCHHHHH-HHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc--Chhhcc
Confidence            99999999876654433 2222333222  23457899999999999999999999999999  666654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.95  E-value=1.7e-28  Score=189.45  Aligned_cols=139  Identities=31%  Similarity=0.540  Sum_probs=110.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............++..|+|||++.+        ..++.++||||+|+++|+|
T Consensus       164 vH~dlkp~NIl~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~el  234 (327)
T 1fvr_A          164 IHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--------SVYTTNSDVWSYGVLLWEI  234 (327)
T ss_dssp             ECSCCSGGGEEECGG-GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHH--------CEECHHHHHHHHHHHHHHH
T ss_pred             cCCCCccceEEEcCC-CeEEEcccCcCccccccccccCCCCCccccChhhhcc--------ccCCchhcchHHHHHHHHH
Confidence            699999999999866 6799999999975443332334456889999999853        4578999999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ++ |..||.+..... .............+..+++++.+++.+||..||.+||++.+++++|+.++....
T Consensus       235 lt~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          235 VSLGGTPYCGMTCAE-LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             HTTSCCTTTTCCHHH-HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             HcCCCCCCCCCcHHH-HHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence            98 999998766433 333333444556677899999999999999999999999999999999887554

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.95  E-value=4e-28  Score=186.10  Aligned_cols=139  Identities=30%  Similarity=0.534  Sum_probs=107.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++......   ......+++.|+|||.+.+        ..++.++|+||||+++
T Consensus       169 vH~dikp~NIli~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  239 (313)
T 3brb_A          169 LHRDLAARNCMLRDD-MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD--------RVYTSKSDVWAFGVTM  239 (313)
T ss_dssp             CCCCCSGGGEEECTT-SCEEECSCSCC----------------CCGGGSCHHHHHS--------SCCCHHHHHHHHHHHH
T ss_pred             ccCCCCcceEEEcCC-CcEEEeecCcceecccccccCcccccCCCccccCchhhcC--------CCccchhhhHHHHHHH
Confidence            799999999999976 679999999997543221   1223456889999999853        5688999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |+|++ |..||.+...... .........+..+..+++++.+++.+||..||.+||++.+++++|+.++..++
T Consensus       240 ~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          240 WEIATRGMTPYPGVQNHEM-YDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             HHHHTTSCCSSTTCCGGGH-HHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             HHHHhcCCCCCccCCHHHH-HHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            99999 8899987654332 33344455667778899999999999999999999999999999999876543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.95  E-value=6e-28  Score=182.63  Aligned_cols=139  Identities=24%  Similarity=0.369  Sum_probs=109.0

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.++  ..+||+|||++.............||+.|+|||++.+        ..++.++||||+|+++|
T Consensus       127 ~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  198 (284)
T 3kk8_A          127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK--------DPYSKPVDIWACGVILY  198 (284)
T ss_dssp             ECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHH
T ss_pred             CcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcC--------CCCCcccchHHHHHHHH
Confidence            6999999999997542  3499999999976555444455689999999999853        56789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ++++|..||.+.................+  ....+++++.+++.+||..||.+||++.++++  +.|+....
T Consensus       199 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~--h~~~~~~~  269 (284)
T 3kk8_A          199 ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK--VPWICNRE  269 (284)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT--SHHHHSCC
T ss_pred             HHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc--CccccCCh
Confidence            99999999987665443333222222222  22468999999999999999999999999999  77776544

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.95  E-value=2.5e-28  Score=190.39  Aligned_cols=131  Identities=23%  Similarity=0.367  Sum_probs=107.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ....+||+.|+|||++.+        ..++.++|+||+||++|+|
T Consensus       163 vHrDlkp~NIll~~~-g~~kL~DFg~a~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~el  231 (350)
T 1rdq_E          163 IYRDLKPENLLIDQQ-GYIQVTDFGFAKRVKGR--TWTLCGTPEALAPEIILS--------KGYNKAVDWWALGVLIYEM  231 (350)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECSSC--BCCCEECGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHHH
T ss_pred             ccccCccceEEECCC-CCEEEcccccceeccCC--cccccCCccccCHHHhcC--------CCCCCcCCEecccHhHhHH
Confidence            699999999999976 68999999999855432  235689999999999853        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|..||.+....... .. .......+|..+++++.+++.+||..||.+||+     +.++++  |.|+.
T Consensus       232 l~g~~Pf~~~~~~~~~-~~-i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~--h~~f~  298 (350)
T 1rdq_E          232 AAGYPPFFADQPIQIY-EK-IVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN--HKWFA  298 (350)
T ss_dssp             HHSSCSSCCSSHHHHH-HH-HHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT--SGGGT
T ss_pred             hhCCCCCCCCCHHHHH-HH-HHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh--CcCcC
Confidence            9999999876643332 22 223455678889999999999999999999998     888888  55554

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.95  E-value=3.9e-28  Score=189.06  Aligned_cols=139  Identities=24%  Similarity=0.347  Sum_probs=105.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-----cccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-----TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++....     .......+||+.|+|||++.+       ...++.++||||+||
T Consensus       146 vH~Dlkp~NIl~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~  217 (351)
T 3mi9_A          146 LHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG-------ERDYGPPIDLWGAGC  217 (351)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTT-------CCSCCTHHHHHHHHH
T ss_pred             eCCCCCHHHEEEcCC-CCEEEccchhcccccccccccccccCCcccccCccCchhhcC-------CCCCCcHhHHHHHHH
Confidence            699999999999976 6899999999974331     122344578999999998753       355789999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHH--HHccCCCCCCCC----------------------------CcHHHHHHHHHhcc
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAA--AFKHARPGLPED----------------------------ISPDLAFIVQSCWV  125 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~p~~----------------------------~~~~~~~l~~~~l~  125 (198)
                      ++|+|++|..||.+..........  ......+.....                            .++++.+|+.+||.
T Consensus       218 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  297 (351)
T 3mi9_A          218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV  297 (351)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhc
Confidence            999999999999887654433222  112222211111                            26779999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          126 EDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       126 ~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      .||.+|||+.++++  +.|+....
T Consensus       298 ~dP~~R~t~~e~l~--hp~f~~~~  319 (351)
T 3mi9_A          298 LDPAQRIDSDDALN--HDFFWSDP  319 (351)
T ss_dssp             SSGGGSCCHHHHHT--SGGGGSSS
T ss_pred             CChhhCCCHHHHhC--CCCcCCCC
Confidence            99999999999999  78876443

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=6.3e-28  Score=183.76  Aligned_cols=139  Identities=30%  Similarity=0.534  Sum_probs=109.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-----ccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +||||||+|||++.+ +.+||+|||+++.......     .....+|+.|+|||.+.+        ..++.++|+||+|+
T Consensus       150 ~H~dikp~Nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~  220 (298)
T 3f66_A          150 VHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGV  220 (298)
T ss_dssp             CCSCCSGGGEEECTT-CCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHH--------CCCCHHHHHHHHHH
T ss_pred             cCCCCchheEEECCC-CCEEECcccccccccccchhccccccCCCCCccccChHHhcC--------CCCChHHHHHHHHH
Confidence            799999999999966 6899999999975433221     223457789999999853        56889999999999


Q ss_pred             HHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           76 VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        76 ~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ++|++++ |.+||.+..... .............+..+++.+.+++.+||..||.+||++.++++.|+.++....
T Consensus       221 il~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          221 LLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHHHHTTSCCSSTTSCTTT-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHhCCCCCCccCCHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            9999999 556666544332 233334455556677899999999999999999999999999999999877554

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.95  E-value=3.2e-28  Score=202.80  Aligned_cols=137  Identities=27%  Similarity=0.541  Sum_probs=110.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......+|..|+|||++..        ..++.++|||||||+
T Consensus       491 iHrDLkp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~--------~~~~~~sDvwSlGv~  561 (635)
T 4fl3_A          491 VHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY--------YKFSSKSDVWSFGVL  561 (635)
T ss_dssp             CCSCCSGGGEEEEET-TEEEECCTTHHHHTTC-------------CGGGSCHHHHHH--------CCCCHHHHHHHHHHH
T ss_pred             eCCCCChHhEEEeCC-CCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcC--------CCCCcHHHHHHHHHH
Confidence            799999999999976 689999999997543222    1222356788999999853        578999999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +|||++ |..||.+..... .............|..+++++.+++.+||..||.+||++.++++.|+.+...
T Consensus       562 l~ellt~G~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  632 (635)
T 4fl3_A          562 MWEAFSYGQKPYRGMKGSE-VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  632 (635)
T ss_dssp             HHHHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            999998 999998876543 3344445566777888999999999999999999999999999999988654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=7.3e-28  Score=180.71  Aligned_cols=134  Identities=25%  Similarity=0.516  Sum_probs=109.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.++|+|||+.....    .....||+.|+|||++.+.     ....++.++||||+|+++|++
T Consensus       135 ~H~dikp~Nil~~~~-~~~~l~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~-----~~~~~~~~~Di~slG~il~el  204 (271)
T 3kmu_A          135 PRHALNSRSVMIDED-MTARISMADVKFSFQ----SPGRMYAPAWVAPEALQKK-----PEDTNRRSADMWSFAVLLWEL  204 (271)
T ss_dssp             TTCCCSGGGEEECTT-SCEEEEGGGSCCTTS----CTTCBSCGGGSCHHHHHSC-----GGGSCHHHHHHHHHHHHHHHH
T ss_pred             ecCCCccceEEEcCC-cceeEEeccceeeec----ccCccCCccccChhhhccC-----CCCCCCchhhHHHHHHHHHHH
Confidence            699999999999966 679999888865422    2345789999999998541     112334489999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ++|..||.+................+..+..+++++.+++.+||..||.+|||+.++++.|+.+
T Consensus       205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          205 VTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             HHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            9999999887766555555556667778888999999999999999999999999999999876

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.95  E-value=5.5e-28  Score=186.75  Aligned_cols=133  Identities=23%  Similarity=0.399  Sum_probs=103.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..++.++|+||+|+++|+
T Consensus       143 vH~Dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~e  213 (327)
T 3a62_A          143 IYRDLKPENIMLNHQ-GHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR--------SGHNRAVDWWSLGALMYD  213 (327)
T ss_dssp             CCCCCCTTTEEECTT-SCEEECCCSCC----------CTTSSCCTTSCHHHHTT--------SCCCTHHHHHHHHHHHHH
T ss_pred             EcccCCHHHeEECCC-CcEEEEeCCcccccccCCccccccCCCcCccCHhhCcC--------CCCCCcccchhHHHHHHH
Confidence            799999999999976 6899999999975332 222345689999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      |++|..||.+.........  .......+|..+++++.+++.+||..||.+||     ++.++++  |.|+.
T Consensus       214 l~~g~~pf~~~~~~~~~~~--i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~--hp~f~  281 (327)
T 3a62_A          214 MLTGAPPFTGENRKKTIDK--ILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA--HPFFR  281 (327)
T ss_dssp             HHHSSCSCCCSSHHHHHHH--HHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH--SGGGS
T ss_pred             HHHCCCCCCCCCHHHHHHH--HHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc--CCccc
Confidence            9999999987665433222  22345567788999999999999999999999     7888888  56653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=9.6e-29  Score=202.76  Aligned_cols=135  Identities=21%  Similarity=0.387  Sum_probs=109.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+        ..++.++|+||+||++|||
T Consensus       308 vHrDLKPeNILld~~-g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~--------~~~~~~~DiwSLGvilyeL  378 (576)
T 2acx_A          308 VYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--------ERYTFSPDWWALGCLLYEM  378 (576)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTT--------CEESSHHHHHHHHHHHHHH
T ss_pred             eccCCchheEEEeCC-CCeEEEecccceecccCccccccCCCccccCHHHHcC--------CCCCccchHHHHHHHHHHH
Confidence            699999999999976 6899999999986554444456789999999999853        5678999999999999999


Q ss_pred             HcCCCCCCCCCc--HHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSN--LQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      ++|..||.+...  ................+..+++++.+|+.+||..||.+||     ++.++++  |.|+.
T Consensus       379 ltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~--HpfF~  449 (576)
T 2acx_A          379 IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE--HPLFK  449 (576)
T ss_dssp             HHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT--SGGGT
T ss_pred             HhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh--Chhhc
Confidence            999999986532  1122222333455667788999999999999999999999     7899988  66654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.95  E-value=2.8e-28  Score=191.60  Aligned_cols=137  Identities=29%  Similarity=0.532  Sum_probs=100.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--c--cCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--M--TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .  ....++..|+|||++.+        ..++.++||||||++
T Consensus       169 vH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~SlG~i  239 (373)
T 2qol_A          169 VHRDLAARNILINSN-LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--------RKFTSASDVWSYGIV  239 (373)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECCC----------------------CTTSCHHHHHH--------CCCCHHHHHHHHHHH
T ss_pred             eCCCCCcceEEEcCC-CCEEECcCccccccccCCccceeccCCCcCCCccChhhhcc--------CCcCchhcHHHHHHH
Confidence            799999999999976 6899999999975433211  1  11235678999999853        568899999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +||+++ |..||.+..... ...........+.+..++..+.+++.+||..||.+||++.++++.|+.+...
T Consensus       240 l~ellt~g~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          240 LWEVMSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHTTC-CTTTTCCHHH-HHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            999997 999998766533 3333344445556778999999999999999999999999999999988764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=5.1e-28  Score=183.46  Aligned_cols=143  Identities=24%  Similarity=0.506  Sum_probs=115.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+||+++.+ +.+||+|||+++.......    .....+|..|+|||++.+        ..++.++|+||+|++
T Consensus       132 ~H~dlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  202 (287)
T 1u59_A          132 VHRDLAARNVLLVNR-HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF--------RKFSSRSDVWSYGVT  202 (287)
T ss_dssp             ECCCCSGGGEEEEET-TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHH--------CEECHHHHHHHHHHH
T ss_pred             eeCCCchheEEEcCC-CCEEECcccceeeeccCcceeeccccccccccccCHHHhcc--------CCCCchhhHHHHHHH
Confidence            699999999999966 6899999999975432211    123456889999999853        457889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCCC
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSP  153 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~~  153 (198)
                      +|++++ |..||.+...... .........+..+..+++++.+++.+||..||.+||++.+++++|+.+......+..
T Consensus       203 l~ellt~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~  279 (287)
T 1u59_A          203 MWEALSYGQKPYKKMKGPEV-MAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE  279 (287)
T ss_dssp             HHHHHTTSCCTTTTCCTHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHcCCCCCcccCCHHHH-HHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence            999998 9999987665433 333344555677888999999999999999999999999999999999887665543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=9.9e-28  Score=184.75  Aligned_cols=138  Identities=25%  Similarity=0.329  Sum_probs=108.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++............|+..|+|||++.+        ..++.++||||+|+++|++
T Consensus       142 ~H~dlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l  212 (326)
T 1blx_A          142 VHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--------SSYATPVDLWSVGCIFAEM  212 (326)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTT--------CCCCTHHHHHHHHHHHHHH
T ss_pred             eeccCCHHHeEEcCC-CCEEEecCcccccccCCCCccccccccceeCHHHHhc--------CCCCcchhHHHHHHHHHHH
Confidence            799999999999976 6799999999986554444456788999999999853        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC-------------------------CCCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR-------------------------PGLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|..||.+................                         ...+..+++.+.+|+.+||..||.+||++.
T Consensus       213 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  292 (326)
T 1blx_A          213 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY  292 (326)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHH
Confidence            9999999887654433222111000                         012345789999999999999999999999


Q ss_pred             HHHHHHHHHHhhcC
Q 029154          136 QIIRMLNAFLFTLR  149 (198)
Q Consensus       136 ~~l~~l~~~~~~~~  149 (198)
                      ++++  +.|+....
T Consensus       293 e~l~--hp~~~~~~  304 (326)
T 1blx_A          293 SALS--HPYFQDLE  304 (326)
T ss_dssp             HHHT--SGGGTTCC
T ss_pred             HHhc--Cccccccc
Confidence            9998  77776554

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=1.9e-28  Score=189.06  Aligned_cols=137  Identities=27%  Similarity=0.407  Sum_probs=105.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++....   .......+||+.|+|||++.+       ...++.++||||+||++
T Consensus       127 vH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~il  198 (323)
T 3tki_A          127 THRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-------REFHAEPVDVWSCGIVL  198 (323)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHC-------SSBCHHHHHHHHHHHHH
T ss_pred             cccccchHHEEEeCC-CCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhcc-------CCCCCCcccHHHHHHHH
Confidence            699999999999976 6799999999975432   222345689999999999853       23346789999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+|++|..||.+................ ......+++++.+|+.+||..||.+|||+.|+++  +.|+..
T Consensus       199 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~--h~~~~~  267 (323)
T 3tki_A          199 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK--DRWYNK  267 (323)
T ss_dssp             HHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CTTTTC
T ss_pred             HHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh--Chhhcc
Confidence            9999999999865543333333222222 2223558899999999999999999999999999  667653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.95  E-value=7.7e-28  Score=182.01  Aligned_cols=136  Identities=24%  Similarity=0.487  Sum_probs=110.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||+++......  ......+|+.|+|||++.+        ..++.++|+||+|+++|
T Consensus       142 ~H~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~  212 (283)
T 3gen_A          142 LHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY--------SKFSSKSDIWAFGVLMW  212 (283)
T ss_dssp             CCSSCSGGGEEECTT-SCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHH--------CCCSHHHHHHHHHHHHH
T ss_pred             cCCCCccceEEEcCC-CCEEEccccccccccccccccccCCccCcccCCHHHhcc--------CCCCchhhHHHHHHHHH
Confidence            699999999999976 679999999997543322  1223456788999999853        56789999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++++ |..||........ ............+...++.+.+++.+||..||.+||++.+++++|..++.
T Consensus       213 ~l~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          213 EIYSLGKMPYERFTNSET-AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHTTTCCTTTTSCHHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCccccChhHH-HHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            9998 9999987665433 33444455566677889999999999999999999999999999998765

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.95  E-value=2e-28  Score=193.16  Aligned_cols=138  Identities=20%  Similarity=0.321  Sum_probs=107.8

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ .+.+||+|||+++...........+||+.|+|||++.+        ..++.++||||+||++|+
T Consensus       171 vHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~e  242 (387)
T 1kob_A          171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR--------EPVGFYTDMWAIGVLGYV  242 (387)
T ss_dssp             ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT--------CCBCHHHHHHHHHHHHHH
T ss_pred             eecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccC--------CCCCCcccEeeHhHHHHH
Confidence            699999999999743 35799999999986544433444579999999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC--CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA--RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++|..||.+...............  ....+..+++++.+|+.+||..||.+||++.++++  +.|+...
T Consensus       243 lltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~~~  311 (387)
T 1kob_A          243 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE--HPWLKGD  311 (387)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT--STTTSSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh--CccccCC
Confidence            9999999988765443332222221  22334568999999999999999999999999999  6666543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=6.6e-28  Score=182.03  Aligned_cols=141  Identities=30%  Similarity=0.527  Sum_probs=111.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||++.......  ......++..|+|||++.+        ..++.++|+||+|+++|
T Consensus       131 ~H~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~  201 (279)
T 1qpc_A          131 IHRDLRAANILVSDT-LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY--------GTFTIKSDVWSFGILLT  201 (279)
T ss_dssp             ECSCCSGGGEEECTT-SCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH--------CEECHHHHHHHHHHHHH
T ss_pred             eccCCCHhhEEEcCC-CCEEECCCcccccccCcccccccCCCCccCccChhhhcc--------CCCCchhhhHHHHHHHH
Confidence            699999999999966 679999999997544322  1223456788999999853        45788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      +|++ |..||.+..... .............+..+++++.+++.+||..||.+||++.++++.|+.++......
T Consensus       202 el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  274 (279)
T 1qpc_A          202 EIVTHGRIPYPGMTNPE-VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ  274 (279)
T ss_dssp             HHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC---
T ss_pred             HHHhCCCCCCcccCHHH-HHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCC
Confidence            9999 899998766533 33334444555667789999999999999999999999999999999988765443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=189.03  Aligned_cols=139  Identities=19%  Similarity=0.272  Sum_probs=90.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc-------------cCCCCccceecccccccccccccccCCCCch
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM-------------TAETGTYRWMAPELYSTVTLRQGEKKHYNNK   67 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~   67 (198)
                      |||||||+|||++.+ +.+||+|||+++........             ....||+.|+|||++...     ....++.+
T Consensus       160 vH~Dikp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~~~  233 (337)
T 3ll6_A          160 IHRDLKVENLLLSNQ-GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY-----SNFPIGEK  233 (337)
T ss_dssp             BCCCCCGGGCEECTT-SCEEBCCCTTCBCCSSCC-------------------------------CC-----TTSCSSHH
T ss_pred             EEccCCcccEEECCC-CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc-----ccCCCChH
Confidence            699999999999976 67999999999754332111             134689999999987320     13567889


Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           68 VDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        68 ~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +||||||+++|+|++|..||........    .........+...+..+.+++.+||..||.+||++.+++++|+.+...
T Consensus       234 ~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          234 QDIWALGCILYLLCFRQHPFEDGAKLRI----VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             HHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHhCCCCCcchhHHHh----hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            9999999999999999999976443221    112223334556778899999999999999999999999999988775


Q ss_pred             cC
Q 029154          148 LR  149 (198)
Q Consensus       148 ~~  149 (198)
                      ..
T Consensus       310 ~~  311 (337)
T 3ll6_A          310 RN  311 (337)
T ss_dssp             TT
T ss_pred             cC
Confidence            44

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=3.2e-28  Score=196.84  Aligned_cols=138  Identities=22%  Similarity=0.342  Sum_probs=105.5

Q ss_pred             CCCCCCCCCeEE---cCCCCceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchhh
Q 029154            1 MGKFMKEDNLLL---TPDQKSLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVD   69 (198)
Q Consensus         1 iH~dlKp~NIll---~~~~~~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~D   69 (198)
                      |||||||+|||+   +.+ +.+||+|||+++.......        ....+||..|++||++.+        ..++.++|
T Consensus       125 vHrDIKP~NILl~~~~~~-~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~s~~sD  195 (483)
T 3sv0_A          125 LHRDIKPDNFLMGLGRRA-NQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG--------IEQSRRDD  195 (483)
T ss_dssp             ECCCCCGGGEEECCGGGT-TCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--------CCCCHHHH
T ss_pred             eecccCcceEEEecCCCC-CeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcC--------CCCChHHH
Confidence            699999999999   444 6799999999975433221        124679999999999854        56889999


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCc--HHHHHHH----HHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           70 VYSFGIVLWELLTNRLPFEGMSN--LQAAYAA----AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        70 vws~G~~l~e~~~g~~p~~~~~~--~~~~~~~----~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ||||||++|||++|..||.+...  ....+..    ........++..+++++.+++.+||..||.+||++.+|++.|+.
T Consensus       196 vwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~  275 (483)
T 3sv0_A          196 LESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRD  275 (483)
T ss_dssp             HHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            99999999999999999987543  1111111    11111112235678999999999999999999999999999988


Q ss_pred             HHhh
Q 029154          144 FLFT  147 (198)
Q Consensus       144 ~~~~  147 (198)
                      ++..
T Consensus       276 l~~~  279 (483)
T 3sv0_A          276 LFIR  279 (483)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=7.5e-28  Score=186.85  Aligned_cols=141  Identities=25%  Similarity=0.376  Sum_probs=106.1

Q ss_pred             CCCCCCCCCeEEcCCC-CceEEecccCcccCccc---c--cccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ-KSLKLADFGLAREETVT---E--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-~~~kl~DfGla~~~~~~---~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      |||||||+|||++.++ ..+||+|||+++.....   .  ......||+.|+|||++.+      ....++.++||||||
T Consensus       190 vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~~DiwslG  263 (345)
T 3hko_A          190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT------TNESYGPKCDAWSAG  263 (345)
T ss_dssp             ECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC------SSSCCCTHHHHHHHH
T ss_pred             cccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc------CCCCCCcHHHHHHHH
Confidence            6999999999998652 27999999999743221   1  1234579999999999853      235688999999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +++|+|++|..||.+...................+  ..+++++.+++.+||..||.+||++.++++  +.|+....
T Consensus       264 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~--hp~~~~~~  338 (345)
T 3hko_A          264 VLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ--HPWISQFS  338 (345)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH--SHHHHTTS
T ss_pred             HHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc--ChhhccCh
Confidence            99999999999998877655444333333222222  237899999999999999999999999999  77776543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.95  E-value=2.8e-28  Score=188.33  Aligned_cols=138  Identities=23%  Similarity=0.356  Sum_probs=104.9

Q ss_pred             CCCCCCCCCeEEcC--CCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTP--DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~--~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.  +.+.+||+|||+++............||+.|+|||++.+        ..++.++|+||+|+++|
T Consensus       153 vH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~  224 (327)
T 3lm5_A          153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNY--------DPITTATDMWNIGIIAY  224 (327)
T ss_dssp             ECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTT--------CCCCTHHHHHHHHHHHH
T ss_pred             ecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecC--------CCCCchhhHHHHHHHHH
Confidence            69999999999986  136799999999986554444455689999999999853        56889999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHcc--CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKH--ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +|++|..||.+..............  .....+..+++.+.+++.+||..||.+||++.++++  +.|+...
T Consensus       225 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~--h~~~~~~  294 (327)
T 3lm5_A          225 MLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS--HSWLQQW  294 (327)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT--CGGGCCC
T ss_pred             HHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC--CHhhccc
Confidence            9999999998876544433322222  222334568999999999999999999999999998  7776543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=1e-28  Score=188.16  Aligned_cols=141  Identities=26%  Similarity=0.496  Sum_probs=99.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-----ccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++.......     ....+||+.|+|||++.+....  ....++.++||||||+
T Consensus       135 vH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~~~~~~DvwslG~  211 (301)
T 3q4u_A          135 AHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV--DCFDSYKRVDIWAFGL  211 (301)
T ss_dssp             ECSCCCGGGEEECTT-SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCT--TCHHHHHHHHHHHHHH
T ss_pred             ecCCCChHhEEEcCC-CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCC--CcccCCchhhHHHHHH
Confidence            699999999999976 6899999999974322111     2334799999999998541000  0003446899999999


Q ss_pred             HHHHHHcC----------CCCCCCCCc----HHHHHHHH-HccCCCCCCC-----CCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           76 VLWELLTN----------RLPFEGMSN----LQAAYAAA-FKHARPGLPE-----DISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        76 ~l~e~~~g----------~~p~~~~~~----~~~~~~~~-~~~~~~~~p~-----~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|||++|          ..||.....    ........ .....+..+.     ..++++.+++.+||..||.+|||+.
T Consensus       212 il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  291 (301)
T 3q4u_A          212 VLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTAL  291 (301)
T ss_dssp             HHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHH
Confidence            99999999          888864321    12221111 1222233332     2457899999999999999999999


Q ss_pred             HHHHHHHHH
Q 029154          136 QIIRMLNAF  144 (198)
Q Consensus       136 ~~l~~l~~~  144 (198)
                      ++++.|+.+
T Consensus       292 ~i~~~L~~i  300 (301)
T 3q4u_A          292 RIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhcc
Confidence            999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=5.3e-28  Score=184.19  Aligned_cols=137  Identities=26%  Similarity=0.418  Sum_probs=102.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||+++......  .....+||+.|+|||++.+        ..++.++|+||+|+++|
T Consensus       133 ~H~Dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~~l~  203 (294)
T 4eqm_A          133 VHRDIKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG--------EATDECTDIYSIGIVLY  203 (294)
T ss_dssp             CCCCCCGGGEEECTT-SCEEECCCSSSTTC-------------CCSSCCHHHHHT--------CCCCTTHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEECCC-CCEEEEeCCCccccccccccccCccccCccccCHhHhcC--------CCCCchHhHHHHHHHHH
Confidence            799999999999976 679999999997544322  1234578999999999853        56788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC---CCCCCCcHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP---GLPEDISPDLAFIVQSCWVEDPNLRP-SFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~l~~~~l~~dp~~Rp-s~~~~l~~l~~~~~  146 (198)
                      +|++|..||.+.................   ..+..+++.+.+++.+||..||.+|| +++++.+.|..++.
T Consensus       204 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          204 EMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             HHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             HHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence            9999999998877554433333222211   23466889999999999999999998 88888888776544

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.95  E-value=3.7e-28  Score=187.42  Aligned_cols=141  Identities=23%  Similarity=0.354  Sum_probs=103.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... ......+||+.|+|||++.+       ...++.++||||+||++|+
T Consensus       122 vH~Dikp~NIl~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~  193 (324)
T 3mtl_A          122 LHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG-------STDYSTQIDMWGVGCIFYE  193 (324)
T ss_dssp             EESSCCGGGEEECTT-CCEEECSSSEEECC------------CGGGCCHHHHTT-------CCCCCTHHHHHHHHHHHHH
T ss_pred             cCCCcCHHHEEECCC-CCEEEccCcccccccCCccccccccCcccccChhhhcC-------CCCCCcHHHHHHHHHHHHH
Confidence            699999999999977 67999999999754322 22344578999999998753       3567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--C--------------------------CCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--G--------------------------LPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~--------------------------~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|..||.+................+  .                          ....+++++.+|+.+||..||.+|
T Consensus       194 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  273 (324)
T 3mtl_A          194 MATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNR  273 (324)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccC
Confidence            999999998876544332221111100  0                          012467899999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCC
Q 029154          132 PSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~~  151 (198)
                      ||+.|+++  +.|+......
T Consensus       274 ~t~~e~l~--hp~f~~~~~~  291 (324)
T 3mtl_A          274 ISAEDAMK--HPFFLSLGER  291 (324)
T ss_dssp             CCHHHHTT--SGGGGGGCST
T ss_pred             CCHHHHhc--Chhhhhcccc
Confidence            99999999  8888766544

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.95  E-value=6.5e-28  Score=188.72  Aligned_cols=136  Identities=25%  Similarity=0.478  Sum_probs=92.1

Q ss_pred             CCCCCCCCCeEEcCCC-CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCc-hhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ-KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNN-KVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~-~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.++ ..+||+|||+++...........+||+.|+|||++.+        ..++. ++||||+||++|
T Consensus       138 vH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~~DiwslG~il~  209 (361)
T 3uc3_A          138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR--------QEYDGKIADVWSCGVTLY  209 (361)
T ss_dssp             CSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHC--------SSCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcC--------CCCCCCeeeeehhHHHHH
Confidence            7999999999998652 2499999999975443333445679999999999853        34444 489999999999


Q ss_pred             HHHcCCCCCCCCCc---HHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSN---LQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +|++|..||.+...   ....... ........|  ..+++++.+|+.+||..||.+|||+.++++  |.|+..
T Consensus       210 ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~--hp~f~~  280 (361)
T 3uc3_A          210 VMLVGAYPFEDPEEPRDYRKTIQR-ILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT--HSWFLK  280 (361)
T ss_dssp             HHHHSSCSCC----CCCHHHHHHH-HHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT--SHHHHT
T ss_pred             HHHhCCCCCCCCccHHHHHHHHHH-HhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh--Ccchhc
Confidence            99999999976432   1111111 122222333  357999999999999999999999999999  777654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.6e-27  Score=184.57  Aligned_cols=138  Identities=28%  Similarity=0.520  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+ +.+||+|||+++.......    .....++..|+|||++.+        ..++.++||||||++
T Consensus       169 vH~Dikp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  239 (333)
T 1mqb_A          169 VHRDLAARNILVNSN-LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY--------RKFTSASDVWSFGIV  239 (333)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECCCCC-----------------CCCGGGSCHHHHHS--------CCCCHHHHHHHHHHH
T ss_pred             eCCCCChheEEECCC-CcEEECCCCcchhhccccccccccCCCCccccccCchhccc--------CCCCchhhhHHHHHH
Confidence            799999999999976 6899999999975432211    112345788999999853        568899999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +|++++ |..||.+..... .............+..+++.+.+++.+||..||.+||++.++++.|+.++...
T Consensus       240 l~ellt~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          240 MWEVMTYGERPYWELSNHE-VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             HHHHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHcCCCCCcccCCHHH-HHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            999998 999998766433 33334444556667789999999999999999999999999999999887643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.95  E-value=7e-28  Score=193.94  Aligned_cols=140  Identities=26%  Similarity=0.366  Sum_probs=97.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc----------------------------ccccCCCCccceecccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT----------------------------EMMTAETGTYRWMAPELYS   52 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~   52 (198)
                      |||||||+|||++.+ +.+||+|||+++.....                            ......+||+.|+|||++.
T Consensus       178 iHrDlKp~NILl~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  256 (458)
T 3rp9_A          178 LHRDLKPANCLVNQD-CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL  256 (458)
T ss_dssp             BCCCCCGGGEEECTT-CCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT
T ss_pred             CCCCCChhhEEECCC-CCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence            799999999999977 68999999999854311                            1233457899999999864


Q ss_pred             cccccccccCCCCchhhHHHHHHHHHHHHc-----------CCCCCCCCCcH--------------------HHHHHH--
Q 029154           53 TVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----------NRLPFEGMSNL--------------------QAAYAA--   99 (198)
Q Consensus        53 ~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~-----------g~~p~~~~~~~--------------------~~~~~~--   99 (198)
                      .       ...++.++||||+||++|||++           |.++|.+....                    ......  
T Consensus       257 ~-------~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  329 (458)
T 3rp9_A          257 L-------QENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN  329 (458)
T ss_dssp             T-------CCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHH
T ss_pred             C-------CCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHH
Confidence            2       3568999999999999999998           66677654310                    000000  


Q ss_pred             HH--------------------ccCCC-------CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154          100 AF--------------------KHARP-------GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       100 ~~--------------------~~~~~-------~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ..                    .....       ......++++.+|+.+||..||.+|||++|+++  |.|+.....
T Consensus       330 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~--Hp~f~~~~~  405 (458)
T 3rp9_A          330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA--HPFFKEVRI  405 (458)
T ss_dssp             HHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGTTTCC
T ss_pred             HcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc--CHhhhhcCC
Confidence            00                    00000       012346899999999999999999999999999  888876543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.95  E-value=1.2e-28  Score=195.62  Aligned_cols=140  Identities=24%  Similarity=0.317  Sum_probs=106.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++......  ...+.+||+.|+|||++....    ....++.++|+||+||++|
T Consensus       190 vHrDLKp~NILl~~~-g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----~~~~~~~~~DiwSlGvily  264 (410)
T 3v8s_A          190 IHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG----GDGYYGRECDWWSVGVFLY  264 (410)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTT----TTCEEETHHHHHHHHHHHH
T ss_pred             EeccCCHHHeeECCC-CCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccC----CCcCCCCcceEecchHHHH
Confidence            699999999999977 689999999997544322  234678999999999985300    0112678999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHcc--CCCCCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKH--ARPGLPEDISPDLAFIVQSCWVEDPNL--RPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~~l~~~~~~  147 (198)
                      ||++|..||.+..............  ...+....+++++.+|+.+||..+|.+  |++++++++  |.|+..
T Consensus       265 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~--Hp~f~~  335 (410)
T 3v8s_A          265 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR--HLFFKN  335 (410)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT--SGGGCC
T ss_pred             HHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc--CccccC
Confidence            9999999998866544332222211  222333468999999999999998888  999999999  667653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=1.7e-28  Score=189.90  Aligned_cols=149  Identities=21%  Similarity=0.390  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---------ccccCCCCccceecccccccccccccccCCCCchhhHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVY   71 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvw   71 (198)
                      |||||||+|||++.+ +.+||+|||+++.....         ......+||+.|+|||++.+..... ....++.++|||
T Consensus       142 vH~Dikp~Nill~~~-~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~~~Diw  219 (336)
T 3g2f_A          142 SHRDLNSRNVLVKND-GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLR-DXESALKQVDMY  219 (336)
T ss_dssp             ECSSCSGGGEEECTT-SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGG-GHHHHHHHHHHH
T ss_pred             eecccccceEEEcCC-CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccc-cccccccccchH
Confidence            699999999999976 68999999999754321         1122457999999999985311000 012456789999


Q ss_pred             HHHHHHHHHHcCCCCCCCCCc-----------------HHHHH-HHHHccCCCCCCCC------CcHHHHHHHHHhcccC
Q 029154           72 SFGIVLWELLTNRLPFEGMSN-----------------LQAAY-AAAFKHARPGLPED------ISPDLAFIVQSCWVED  127 (198)
Q Consensus        72 s~G~~l~e~~~g~~p~~~~~~-----------------~~~~~-~~~~~~~~~~~p~~------~~~~~~~l~~~~l~~d  127 (198)
                      ||||++|||++|..||.....                 ..... ........+.+|..      +++++.+++.+||..|
T Consensus       220 slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  299 (336)
T 3g2f_A          220 ALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD  299 (336)
T ss_dssp             HHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCC
Confidence            999999999999766532111                 01111 11112233344443      3457999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhhcCCC
Q 029154          128 PNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      |.+|||+.++++.|+.++......
T Consensus       300 P~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          300 AEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             GGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             hhhCcchHHHHHHHHHHHHHHHhc
Confidence            999999999999999988755543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=1e-28  Score=197.49  Aligned_cols=141  Identities=20%  Similarity=0.344  Sum_probs=106.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++......  .....+||+.|+|||++....   .....++.++||||+||++|
T Consensus       197 iHrDLKp~NILl~~~-g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~~~~~~DvwSlGvil~  272 (437)
T 4aw2_A          197 VHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME---GGKGRYGPECDWWSLGVCMY  272 (437)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHH---TSCCEECTHHHHHHHHHHHH
T ss_pred             EecccCHHHeeEcCC-CCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcc---cCCCCCCCcCeeHHHHHHHH
Confidence            699999999999977 689999999997543322  233468999999999975200   01245789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHcc---CCCCCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKH---ARPGLPEDISPDLAFIVQSCWVEDPNL--RPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~l~~~~l~~dp~~--Rps~~~~l~~l~~~~~~  147 (198)
                      ||++|..||.+..............   ..+..+..+++++.+|+.+||..+|.+  |++++++++  |.|+..
T Consensus       273 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~--Hpff~~  344 (437)
T 4aw2_A          273 EMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK--HPFFSG  344 (437)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT--SGGGTT
T ss_pred             HHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC--CCccCC
Confidence            9999999998876544332222111   122233458999999999999888888  899999999  777754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.95  E-value=7.4e-28  Score=182.93  Aligned_cols=138  Identities=27%  Similarity=0.538  Sum_probs=110.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+ +.+||+|||++........    .....++..|+|||++.+        ..++.++|+||+|++
T Consensus       139 ~H~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  209 (291)
T 1xbb_A          139 VHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY--------YKFSSKSDVWSFGVL  209 (291)
T ss_dssp             ECSCCSGGGEEEEET-TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             EcCCCCcceEEEeCC-CcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhcc--------CCCChhhhHHHHHHH
Confidence            699999999999966 6899999999975432211    122346788999999853        456889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +|++++ |..||.+..... ..........+..+..+++++.+++.+||..||.+||++.++++.|+.++...
T Consensus       210 l~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          210 MWEAFSYGQKPYRGMKGSE-VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             HHHHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            999999 999998766533 33334445556677889999999999999999999999999999999987654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.95  E-value=8e-28  Score=181.64  Aligned_cols=137  Identities=22%  Similarity=0.433  Sum_probs=108.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||++....... .....|+..|+|||.+.+        ..++.++|+||+|+++|+|
T Consensus       131 ~H~dlkp~Nili~~~-~~~~l~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l  200 (279)
T 3fdn_A          131 IHRDIKPENLLLGSA-GELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEG--------RMHDEKVDLWSLGVLCYEF  200 (279)
T ss_dssp             EECCCCGGGEEECTT-SCEEECSCCEESCC---------CCCCTTCCHHHHTT--------CCCCTTHHHHHHHHHHHHH
T ss_pred             ecccCChHhEEEcCC-CCEEEEeccccccCCccc-ccccCCCCCccCHhHhcc--------CCCCccchhHhHHHHHHHH
Confidence            699999999999976 679999999986443322 234578999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      ++|..||.+.......  ..........|..+++++.+++.+||..||.+||++.++++  +.|+......
T Consensus       201 ~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~--h~~~~~~~~~  267 (279)
T 3fdn_A          201 LVGKPPFEANTYQETY--KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITANSSK  267 (279)
T ss_dssp             HHSSCTTCCSSHHHHH--HHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH--CHHHHHHCSS
T ss_pred             HHCCCCCCCCcHHHHH--HHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh--CccccCCccC
Confidence            9999999876643332  22334555677889999999999999999999999999999  7887765543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=3e-29  Score=196.89  Aligned_cols=136  Identities=13%  Similarity=0.167  Sum_probs=101.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++......  ....+|+.|+|||++.+      ....++.++|||||||++|+|
T Consensus       216 vHrDikp~NIll~~~-~~~kL~DFG~a~~~~~~~--~~~~~t~~y~aPE~~~~------~~~~~~~~~DiwSlG~il~el  286 (371)
T 3q60_A          216 VHGHFTPDNLFIMPD-GRLMLGDVSALWKVGTRG--PASSVPVTYAPREFLNA------STATFTHALNAWQLGLSIYRV  286 (371)
T ss_dssp             EETTCSGGGEEECTT-SCEEECCGGGEEETTCEE--EGGGSCGGGCCHHHHTC------SEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCcCCHHHEEECCC-CCEEEEecceeeecCCCc--cCccCCcCCcChhhccC------CCCCcCccccHHHHHHHHHHH
Confidence            699999999999976 689999999998654322  13456799999999853      125679999999999999999


Q ss_pred             HcCCCCCCCCCcHHHH-HH----HHHc--cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAA-YA----AAFK--HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~-~~----~~~~--~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||.+....... +.    ....  ....+.+..+++++.+|+.+||..||.+||++.++++  +.|+..
T Consensus       287 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~  358 (371)
T 3q60_A          287 WCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME--TPEFLQ  358 (371)
T ss_dssp             HHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT--SHHHHH
T ss_pred             HhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc--CHHHHH
Confidence            9999999765321100 00    0000  1111223468999999999999999999999999998  566543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=9.5e-28  Score=185.77  Aligned_cols=140  Identities=29%  Similarity=0.586  Sum_probs=112.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......+++.|+|||++.+        ..++.++||||+|+++
T Consensus       179 vH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  249 (334)
T 2pvf_A          179 IHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD--------RVYTHQSDVWSFGVLM  249 (334)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH--------CEECHHHHHHHHHHHH
T ss_pred             eCCCCccceEEEcCC-CCEEEccccccccccccccccccCCCCcccceeChHHhcC--------CCcChHHHHHHHHHHH
Confidence            699999999999976 679999999997543322   1223456789999998753        4578999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      |++++ |..||.+.... ..............+..++.++.+++.+||..||.+||++.++++.|+.++.....
T Consensus       250 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~  322 (334)
T 2pvf_A          250 WEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN  322 (334)
T ss_dssp             HHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHHhCCCCCcCcCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence            99999 99999876543 33334444555667788999999999999999999999999999999998876543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.4e-27  Score=186.16  Aligned_cols=141  Identities=17%  Similarity=0.246  Sum_probs=107.9

Q ss_pred             CCCCCCCCCeEEcCCCC--ceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPDQK--SLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~--~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      |||||||+|||++.+ +  .+||+|||+++.......        .....||+.|+|||++.+        ..++.++||
T Consensus       181 vH~Dikp~NIl~~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di  251 (352)
T 2jii_A          181 VHGNVTAENIFVDPE-DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG--------CGPSRRSDL  251 (352)
T ss_dssp             BCSCCCGGGEEEETT-EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT--------CCCCHHHHH
T ss_pred             cCCCCCHHHEEEcCC-CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc--------CCCCchhhH
Confidence            699999999999976 5  799999999975433211        133478999999999853        568899999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-cHHHHHHH--HHccCCCCCC------CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMS-NLQAAYAA--AFKHARPGLP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~-~~~~~~~~--~~~~~~~~~p------~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      ||||+++|+|++|..||.+.. ........  ........++      ..+++++.+++.+||..||.+||++.++++.|
T Consensus       252 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L  331 (352)
T 2jii_A          252 QSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNL  331 (352)
T ss_dssp             HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHH
Confidence            999999999999999998654 22222111  1122222222      24689999999999999999999999999999


Q ss_pred             HHHHhhcCC
Q 029154          142 NAFLFTLRP  150 (198)
Q Consensus       142 ~~~~~~~~~  150 (198)
                      +.++.....
T Consensus       332 ~~~~~~~~~  340 (352)
T 2jii_A          332 EALLQDLRV  340 (352)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHhcCC
Confidence            998876653

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.95  E-value=7e-29  Score=190.16  Aligned_cols=138  Identities=29%  Similarity=0.435  Sum_probs=104.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---------------ccCCCCccceecccccccccccccccCCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---------------MTAETGTYRWMAPELYSTVTLRQGEKKHYN   65 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~   65 (198)
                      |||||||+|||++.+ +.+||+|||+++.......               ....+||+.|+|||++.+        ..++
T Consensus       130 vH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~  200 (310)
T 3s95_A          130 IHRDLNSHNCLVREN-KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING--------RSYD  200 (310)
T ss_dssp             ECSCCSTTSEEECTT-SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTT--------CCCC
T ss_pred             cCCCCCcCeEEECCC-CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcC--------CCCC
Confidence            699999999999976 6799999999975432211               114579999999999853        6688


Q ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCcHHH----HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           66 NKVDVYSFGIVLWELLTNRLPFEGMSNLQA----AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        66 ~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      .++||||||+++|++++|..|+........    ......   ....+..+++.+.+++.+||..||.+||++.++++.|
T Consensus       201 ~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L  277 (310)
T 3s95_A          201 EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL---DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWL  277 (310)
T ss_dssp             THHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH---HHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc---cccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            999999999999999999988764321100    001111   1123566888999999999999999999999999999


Q ss_pred             HHHHhhcCC
Q 029154          142 NAFLFTLRP  150 (198)
Q Consensus       142 ~~~~~~~~~  150 (198)
                      +.+......
T Consensus       278 ~~l~~~~~~  286 (310)
T 3s95_A          278 ETLRMHLAG  286 (310)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHhccC
Confidence            988665443

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.95  E-value=2e-28  Score=189.80  Aligned_cols=128  Identities=21%  Similarity=0.370  Sum_probs=103.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+       ...++.++||||+|+++|+|
T Consensus       152 vH~Dlkp~NIll~~~-~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~il~el  223 (335)
T 3dls_A          152 IHRDIKDENIVIAED-FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG-------NPYRGPELEMWSLGVTLYTL  223 (335)
T ss_dssp             ECSCCSGGGEEECTT-SCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTT-------CCBCSHHHHHHHHHHHHHHH
T ss_pred             EEeccCHHHEEEcCC-CcEEEeecccceECCCCCceeccCCCccccChhhhcC-------CCCCCCcccchhHHHHHHHH
Confidence            699999999999976 6899999999986554444445679999999999854       22347899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||.....        ........|..+++++.+|+.+||..||.+||++.++++  +.|+.
T Consensus       224 ~~g~~pf~~~~~--------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~--hp~~~  279 (335)
T 3dls_A          224 VFEENPFCELEE--------TVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT--DPWVT  279 (335)
T ss_dssp             HHSSCSCSSGGG--------GTTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH--CTTTT
T ss_pred             HhCCCchhhHHH--------HHhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc--Ccccc
Confidence            999999975332        112233456678999999999999999999999999999  66654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.95  E-value=4.6e-28  Score=186.98  Aligned_cols=139  Identities=17%  Similarity=0.281  Sum_probs=105.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.++..+||+|||+++............|+..|+|||++.+       ...++.++||||+||++|+|
T Consensus       152 vH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~l  224 (330)
T 3nsz_A          152 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD-------YQMYDYSLDMWSLGCMLASM  224 (330)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTT-------CCCCCTHHHHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcC-------CCcCCchhhHHHHHHHHHHH
Confidence            69999999999997755899999999986554444556789999999999753       35688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHH------------ccCC------------------------CCCCCCCcHHHHHHHHHhc
Q 029154           81 LTNRLPFEGMSNLQAAYAAAF------------KHAR------------------------PGLPEDISPDLAFIVQSCW  124 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~------------~~~~------------------------~~~p~~~~~~~~~l~~~~l  124 (198)
                      ++|..||..............            ....                        ...+..+++++.+|+.+||
T Consensus       225 l~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  304 (330)
T 3nsz_A          225 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL  304 (330)
T ss_dssp             HHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTS
T ss_pred             HhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHh
Confidence            999999855443222111100            0000                        1112227899999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhhc
Q 029154          125 VEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       125 ~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ..||.+|||++++++  +.|+...
T Consensus       305 ~~dP~~Rpta~e~l~--hp~f~~~  326 (330)
T 3nsz_A          305 RYDHQSRLTAREAME--HPYFYTV  326 (330)
T ss_dssp             CSSGGGSCCHHHHHT--SGGGTTC
T ss_pred             cCCcccCCCHHHHhc--CccHhhh
Confidence            999999999999999  6666543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=5.5e-28  Score=186.83  Aligned_cols=139  Identities=20%  Similarity=0.291  Sum_probs=104.4

Q ss_pred             CCCCCCCCCeEEcCCCCc-----eEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCch
Q 029154            1 MGKFMKEDNLLLTPDQKS-----LKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNK   67 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~-----~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~   67 (198)
                      |||||||+|||++.+ +.     +||+|||+++.......        ....+||+.|+|||++.+        ..++.+
T Consensus       127 iHrDlkp~Nill~~~-~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~  197 (330)
T 2izr_A          127 IYRDVKPENFLIGRP-GNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG--------KEQSRR  197 (330)
T ss_dssp             ECCCCCGGGEEECCG-GGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--------CCCCHH
T ss_pred             eccCCCHHHeeeccC-CCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcC--------CCCCch
Confidence            699999999999866 44     99999999985432211        235679999999999853        568899


Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCc--HHHHHHHHHc---cCCC-CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           68 VDVYSFGIVLWELLTNRLPFEGMSN--LQAAYAAAFK---HARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        68 ~Dvws~G~~l~e~~~g~~p~~~~~~--~~~~~~~~~~---~~~~-~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +||||||+++|||++|..||.+...  ..........   .... .....++ ++.+++.+||..||.+||++.++.+.|
T Consensus       198 ~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l  276 (330)
T 2izr_A          198 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF  276 (330)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence            9999999999999999999987532  2221111111   1111 1122344 999999999999999999999999999


Q ss_pred             HHHHhhcC
Q 029154          142 NAFLFTLR  149 (198)
Q Consensus       142 ~~~~~~~~  149 (198)
                      +.+.....
T Consensus       277 ~~~~~~~~  284 (330)
T 2izr_A          277 TDLFDRKG  284 (330)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHcC
Confidence            98876543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.95  E-value=2.6e-28  Score=191.62  Aligned_cols=135  Identities=24%  Similarity=0.405  Sum_probs=94.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+        ..++.++||||+||++|+|
T Consensus       149 vH~Dlkp~NIl~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~el  219 (371)
T 2xrw_A          149 IHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEM  219 (371)
T ss_dssp             CCSCCCGGGEEECTT-SCEEECCCCC----------------CTTCCHHHHTT--------CCCCTTHHHHHHHHHHHHH
T ss_pred             ecccCCHHHEEEcCC-CCEEEEEeecccccccccccCCceecCCccCHHHhcC--------CCCCchHhHHHHHHHHHHH
Confidence            799999999999976 6799999999986554444455689999999999853        5688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC---------------------CCC--------------CCC------CcHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR---------------------PGL--------------PED------ISPDLAFI  119 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~--------------p~~------~~~~~~~l  119 (198)
                      ++|..||.+......... ......                     +..              |..      .++++.+|
T Consensus       220 ~~g~~pf~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  298 (371)
T 2xrw_A          220 IKGGVLFPGTDHIDQWNK-VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL  298 (371)
T ss_dssp             HHSSCSSCCSSHHHHHHH-HHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCHHHHHHH-HHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHH
Confidence            999999988765433222 111110                     000              000      15678999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154          120 VQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       120 ~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +.+||..||.+|||++++++  +.|+..
T Consensus       299 i~~mL~~dP~~R~t~~e~l~--hp~~~~  324 (371)
T 2xrw_A          299 LSKMLVIDASKRISVDEALQ--HPYINV  324 (371)
T ss_dssp             HHHHSCSSGGGSCCHHHHHH--SHHHHT
T ss_pred             HHHHCcCChhhCCCHHHHhC--Ccchhh
Confidence            99999999999999999999  777653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=1.1e-27  Score=181.52  Aligned_cols=135  Identities=30%  Similarity=0.477  Sum_probs=98.5

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+  .+.+||+|||+++............||+.|+|||++.         ..++.++|+||+|+++|
T Consensus       146 vH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~---------~~~~~~~Di~slG~il~  216 (285)
T 3is5_A          146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK---------RDVTFKCDIWSAGVVMY  216 (285)
T ss_dssp             CCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT---------TCCCHHHHHHHHHHHHH
T ss_pred             EECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc---------cCCCcccCeehHHHHHH
Confidence            799999999999532  2569999999997654444445567999999999873         45789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC-CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +|++|..||.+................. .....+++++.+++.+||..||.+||++.++++  +.|+.
T Consensus       217 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~--hp~f~  283 (285)
T 3is5_A          217 FLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH--HEWFK  283 (285)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT--SGGGG
T ss_pred             HHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc--CHHhh
Confidence            9999999998866443332222222221 122347899999999999999999999999998  55543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.95  E-value=6.6e-28  Score=188.96  Aligned_cols=140  Identities=21%  Similarity=0.339  Sum_probs=106.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+|||++.+ +.+||+|||++............+||+.|+|||++.+...  .....++.++|||||||++|+|
T Consensus       222 ~H~Dlkp~NIl~~~~-~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~~~Di~slG~il~el  298 (365)
T 2y7j_A          222 VHRDLKPENILLDDN-MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMD--ETHPGYGKEVDLWACGVILFTL  298 (365)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTC--TTSCCBCTTHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCC-CCEEEEecCcccccCCCcccccCCCCCCccChhhcccccc--ccCcCCCchhhHHhHHHHHHHH
Confidence            699999999999976 6899999999976554444556789999999998753110  0123578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|..||.+...................  ...++..+.+++.+||..||.+||++.++++  +.|+
T Consensus       299 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~--hp~f  363 (365)
T 2y7j_A          299 LAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ--HPFF  363 (365)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGG
T ss_pred             HHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc--Cccc
Confidence            9999999876644333222222222211  2457889999999999999999999999998  5554

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.95  E-value=5.3e-28  Score=183.41  Aligned_cols=136  Identities=28%  Similarity=0.543  Sum_probs=106.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +|+||||+||+++.+ +.+||+|||+++......    ......++..|+|||++.+        ..++.++|+||+|++
T Consensus       143 ~H~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  213 (291)
T 1u46_A          143 IHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT--------RTFSHASDTWMFGVT  213 (291)
T ss_dssp             ECSCCCGGGEEEEET-TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             ccCCCchheEEEcCC-CCEEEccccccccccccccchhhhccCCCCceeeCchhhcC--------CCCCchhhHHHHHHH
Confidence            699999999999866 689999999987543221    1223457788999999853        456889999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      +|++++ |..||.+...................+..++.++.+++.+||..||.+||++.+++++|+...
T Consensus       214 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          214 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            999999 999998876544433333334455566789999999999999999999999999999988753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=4.8e-28  Score=198.33  Aligned_cols=139  Identities=29%  Similarity=0.501  Sum_probs=112.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .....++..|+|||++..        ..++.++||||||+++|
T Consensus       385 vHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDvwSlGv~l~  455 (535)
T 2h8h_A          385 VHRDLRAANILVGEN-LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTIKSDVWSFGILLT  455 (535)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             eCCCCCHhhEEEcCC-CcEEEcccccceecCCCceecccCCcCcccccCHHHhcc--------CCCCchhhHHHHHHHHH
Confidence            799999999999866 6799999999986543221  223456789999998853        56899999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ||++ |..||.+..... .........+...+..+++++.+||.+||..||.+||++.++++.|+.++....
T Consensus       456 el~t~g~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~  526 (535)
T 2h8h_A          456 ELTTKGRVPYPGMVNRE-VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  526 (535)
T ss_dssp             HHTTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred             HHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence            9999 899998876543 333444555666778899999999999999999999999999999998765443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=1.6e-28  Score=189.24  Aligned_cols=143  Identities=26%  Similarity=0.381  Sum_probs=101.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   .....+||+.|+|||++.+...   ....++.++|||||||++
T Consensus       153 vH~Dlkp~Nill~~~-~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~~~DiwslG~il  228 (322)
T 3soc_A          153 SHRDIKSKNVLLKNN-LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAIN---FQRDAFLRIDMYAMGLVL  228 (322)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCC---CCHHHHHHHHHHHHHHHH
T ss_pred             EeCCCChHhEEECCC-CeEEEccCCcccccccccCccccccCccCccccCHhhcccccc---cCcCCCccchhHHHHHHH
Confidence            699999999999976 689999999997433221   1233579999999999853110   012345688999999999


Q ss_pred             HHHHcCCCCCCCCCc---------------HHHHHHHHH-ccCCCCCCCC-----CcHHHHHHHHHhcccCCCCCCCHHH
Q 029154           78 WELLTNRLPFEGMSN---------------LQAAYAAAF-KHARPGLPED-----ISPDLAFIVQSCWVEDPNLRPSFSQ  136 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~---------------~~~~~~~~~-~~~~~~~p~~-----~~~~~~~l~~~~l~~dp~~Rps~~~  136 (198)
                      |||++|..||.+...               ......... ....+..+..     .+.++.+++.+||..||.+|||+.+
T Consensus       229 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  308 (322)
T 3soc_A          229 WELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGC  308 (322)
T ss_dssp             HHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHH
Confidence            999999999865321               111111111 1122222221     2456999999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 029154          137 IIRMLNAFLFT  147 (198)
Q Consensus       137 ~l~~l~~~~~~  147 (198)
                      +++.|+.+...
T Consensus       309 ll~~L~~l~~~  319 (322)
T 3soc_A          309 VGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999987553

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=2.6e-27  Score=180.79  Aligned_cols=140  Identities=26%  Similarity=0.403  Sum_probs=109.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||++.....   ........|+..|+|||++.+      ....++.++||||+|+++
T Consensus       131 ~H~dlkp~NIl~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~~Di~slG~il  203 (305)
T 2wtk_C          131 VHKDIKPGNLLLTTG-GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG------LDTFSGFKVDIWSAGVTL  203 (305)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTC------CSCEESHHHHHHHHHHHH
T ss_pred             eecCCCcccEEEcCC-CcEEeeccccccccCccccccccccCCCCCCCcChhhccC------cccCCcchhhHHHHHHHH
Confidence            699999999999976 6799999999975431   222345678999999998753      112346799999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      |++++|..||.+.......  ..........+..+++.+.+++.+||..||.+||++.++++  +.|+....++
T Consensus       204 ~~l~~g~~p~~~~~~~~~~--~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--~~~~~~~~~~  273 (305)
T 2wtk_C          204 YNITTGLYPFEGDNIYKLF--ENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ--HSWFRKKHPP  273 (305)
T ss_dssp             HHHHHSSCSCCCSSHHHHH--HHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH--SHHHHSCCCC
T ss_pred             HHHHhCCCCCCCchHHHHH--HHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhc--CcccccCCCC
Confidence            9999999999876543322  22233455677789999999999999999999999999999  7777655443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.95  E-value=1e-27  Score=186.92  Aligned_cols=135  Identities=25%  Similarity=0.392  Sum_probs=103.6

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.++  ..+||+|||+++....... ....+||+.|+|||++.+        ..++.++||||+||++
T Consensus       152 vHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il  223 (351)
T 3c0i_A          152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR--------EPYGKPVDVWGCGVIL  223 (351)
T ss_dssp             ECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHH
T ss_pred             eeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcC--------CCCCchHhhHHHHHHH
Confidence            6999999999997542  3499999999976543322 345689999999999853        5678999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCC---CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+|++|..||.+...  .............   ....+++++.+|+.+||..||.+||++.++++  +.|+..
T Consensus       224 ~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~--hp~~~~  292 (351)
T 3c0i_A          224 FILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN--HPWLKE  292 (351)
T ss_dssp             HHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHT
T ss_pred             HHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc--ChhhcC
Confidence            999999999987432  2222222221111   12468899999999999999999999999998  666654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=5.6e-28  Score=181.41  Aligned_cols=135  Identities=27%  Similarity=0.531  Sum_probs=108.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||++........  .....++..|+|||++.+        ..++.++|+||+|+++|
T Consensus       126 ~H~dikp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~  196 (268)
T 3sxs_A          126 IHRDLAARNCLVDRD-LCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHY--------FKYSSKSDVWAFGILMW  196 (268)
T ss_dssp             EESSCSGGGEEECTT-CCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHH--------SEEETTHHHHHHHHHHH
T ss_pred             ecCCcCcceEEECCC-CCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhc--------cCCchhhhhHHHHHHHH
Confidence            699999999999976 6799999999975433221  223456778999999853        45788999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++++ |..||........ ............+...++.+.+++.+||..||.+|||+.+++++|+.+.
T Consensus       197 ~l~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          197 EVFSLGKMPYDLYTNSEV-VLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             HHHTTTCCTTTTSCHHHH-HHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             HHHcCCCCCccccChHHH-HHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            9998 9999987665433 3334445555667778999999999999999999999999999997763

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=4.7e-28  Score=186.92  Aligned_cols=140  Identities=27%  Similarity=0.432  Sum_probs=107.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......||..|+|||++.+        ..++.++||||+|++
T Consensus       149 vH~Dikp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  219 (327)
T 3lxl_A          149 VHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD--------NIFSRQSDVWSFGVV  219 (327)
T ss_dssp             ECSCCSGGGEEEEET-TEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             cCCCCChhhEEECCC-CCEEEcccccceecccCCccceeeccCCccccccCHHHhcc--------CCCChHHhHHHHHHH
Confidence            699999999999866 689999999997543221    2233467889999999854        457889999999999


Q ss_pred             HHHHHcCCCCCCCCCc--------------HHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSN--------------LQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~--------------~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +|++++|..||.....              ................+..+++++.+++.+||..||.+||++.+++++|+
T Consensus       220 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  299 (327)
T 3lxl_A          220 LYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD  299 (327)
T ss_dssp             HHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9999999999854221              11222333344556677889999999999999999999999999999999


Q ss_pred             HHHhhcC
Q 029154          143 AFLFTLR  149 (198)
Q Consensus       143 ~~~~~~~  149 (198)
                      .+.....
T Consensus       300 ~~~~~~~  306 (327)
T 3lxl_A          300 MLWSGSR  306 (327)
T ss_dssp             HC-----
T ss_pred             HHHhhhc
Confidence            8765443

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.95  E-value=1.3e-27  Score=194.17  Aligned_cols=135  Identities=25%  Similarity=0.376  Sum_probs=106.6

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++..  .+.+||+|||+++...........+||+.|+|||++.         ..++.++||||+||++|
T Consensus       158 vH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~---------~~~~~~~DiwslG~il~  228 (494)
T 3lij_A          158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR---------KKYDEKCDVWSIGVILF  228 (494)
T ss_dssp             ECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT---------TCBCTHHHHHHHHHHHH
T ss_pred             eeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc---------ccCCCchhHHHHHHHHH
Confidence            699999999999753  2459999999998665545556678999999999874         35789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +|++|..||.+...................  ...+++++.+|+.+||..||.+|||+.++++  +.|+.
T Consensus       229 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~--hp~~~  296 (494)
T 3lij_A          229 ILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE--HPWIK  296 (494)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--CHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc--Ccccc
Confidence            999999999887654433333222222222  2458999999999999999999999999998  55554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.95  E-value=1.4e-27  Score=183.27  Aligned_cols=140  Identities=26%  Similarity=0.474  Sum_probs=99.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||++.............|++.|+|||++.....   ....++.++||||+|+++|+|
T Consensus       147 ~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~~~~~~Di~slG~il~~l  222 (318)
T 2dyl_A          147 IHRDVKPSNILLDER-GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP---TKPDYDIRADVWSLGISLVEL  222 (318)
T ss_dssp             CCCCCCGGGEEECTT-SCEEECCCTTC--------------CCTTCCHHHHC-----------CCTHHHHHHHHHHHHHH
T ss_pred             EeCCCCHHHEEECCC-CCEEEEECCCchhccCCccccccCCCccccChhhcccccc---cccCCccccchhhHHHHHHHH
Confidence            699999999999976 6799999999975544333445678999999999742100   124578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||..................+..+  ..+++++.+++.+||..||.+||++.++++  +.++.
T Consensus       223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--h~~~~  288 (318)
T 2dyl_A          223 ATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE--HSFIK  288 (318)
T ss_dssp             HHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT--SHHHH
T ss_pred             HhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh--CHHHH
Confidence            99999998755544444444444444444  357999999999999999999999999998  55554

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=8.9e-28  Score=185.70  Aligned_cols=139  Identities=24%  Similarity=0.494  Sum_probs=100.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-----ccCCCCccceecccccccccccccccCCCCc------hhh
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-----MTAETGTYRWMAPELYSTVTLRQGEKKHYNN------KVD   69 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~------~~D   69 (198)
                      |||||||+|||++.+ +.+||+|||+++.......     ....+||+.|+|||++.+        ..+..      ++|
T Consensus       164 vH~Dikp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~~~~~~~D  234 (337)
T 3mdy_A          164 AHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE--------SLNRNHFQSYIMAD  234 (337)
T ss_dssp             ECSCCCGGGEEECTT-SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTT--------CCCTTCTHHHHHHH
T ss_pred             EecccchHHEEECCC-CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhccc--------ccCCccccCccccc
Confidence            699999999999976 6899999999974432211     124579999999999854        22223      499


Q ss_pred             HHHHHHHHHHHHcC----------CCCCCCCCc----HHHHHHH-HHccCCCCCCC-----CCcHHHHHHHHHhcccCCC
Q 029154           70 VYSFGIVLWELLTN----------RLPFEGMSN----LQAAYAA-AFKHARPGLPE-----DISPDLAFIVQSCWVEDPN  129 (198)
Q Consensus        70 vws~G~~l~e~~~g----------~~p~~~~~~----~~~~~~~-~~~~~~~~~p~-----~~~~~~~~l~~~~l~~dp~  129 (198)
                      ||||||++|||++|          ..||.....    ....... ......+..+.     .+++++.+++.+||..||.
T Consensus       235 iwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~  314 (337)
T 3mdy_A          235 MYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPA  314 (337)
T ss_dssp             HHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGG
T ss_pred             hHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChh
Confidence            99999999999999          777754321    1111111 11222333332     3567799999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhc
Q 029154          130 LRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       130 ~Rps~~~~l~~l~~~~~~~  148 (198)
                      +||++.+++++|+.+....
T Consensus       315 ~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          315 SRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             GSCCHHHHHHHHHHHHHTT
T ss_pred             hCCCHHHHHHHHHHHHhhc
Confidence            9999999999999887644

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=3.2e-28  Score=197.69  Aligned_cols=135  Identities=29%  Similarity=0.542  Sum_probs=109.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .....++..|+|||++..        ..++.++||||||+++|
T Consensus       340 vHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~sDvwSlG~~l~  410 (495)
T 1opk_A          340 IHRNLAARNCLVGEN-HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSDVWAFGVLLW  410 (495)
T ss_dssp             ECSCCSGGGEEECGG-GCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHH--------CEECHHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEECCC-CcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhc--------CCCCcHHhHHhHHHHHH
Confidence            699999999999866 6799999999986533221  223456789999999853        56789999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ||++ |..||.+..... .........+...|..+++++.+|+.+||..||.+||++.++++.|+.++
T Consensus       411 el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          411 EIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHTTSCCSSTTCCGGG-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            9998 999998766433 23344455566778889999999999999999999999999999988653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.95  E-value=4.9e-28  Score=189.81  Aligned_cols=139  Identities=28%  Similarity=0.379  Sum_probs=97.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ....+||..|+|||++.+       ...++.++||||+||++|+|
T Consensus       154 vH~Dlkp~NIll~~~-~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~el  223 (367)
T 2fst_X          154 IHRDLKPSNLAVNED-CELKILDFGLARHTADE--MTGYVATRWYRAPEIMLN-------WMHYNQTVDIWSVGCIMAEL  223 (367)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECC-----------------CCCTTCCHHHHTT-------CCSCCTTHHHHHHHHHHHHH
T ss_pred             eeCCCCHhhEEECCC-CCEEEeecccccccccc--CCCcCcCcCccChHHHcC-------CcCCCchhhHHHHHHHHHHH
Confidence            799999999999976 68999999999754322  345678999999998753       35678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC---------------------CC--------CCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR---------------------PG--------LPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~--------~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|+.||.+................                     +.        .....++++.+|+.+||..||.+|
T Consensus       224 l~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R  303 (367)
T 2fst_X          224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR  303 (367)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccC
Confidence            9999999887654433222110000                     00        013467899999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCC
Q 029154          132 PSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~~  151 (198)
                      ||+.++++  +.|+.....+
T Consensus       304 ~t~~e~L~--hp~~~~~~~~  321 (367)
T 2fst_X          304 ITAAQALA--HAYFAQYHDP  321 (367)
T ss_dssp             CCHHHHHT--SGGGTTTCCG
T ss_pred             cCHHHHhc--ChhhhhccCC
Confidence            99999999  7787655433

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=4.9e-28  Score=197.81  Aligned_cols=134  Identities=25%  Similarity=0.421  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc-ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM-MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++....... ....+||+.|+|||++.+        ..++.++|+||+||++||
T Consensus       311 vHrDLKP~NILl~~~-g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~~~~~~DiwSlGvilye  381 (543)
T 3c4z_A          311 IYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG--------EEYDFSVDYFALGVTLYE  381 (543)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             cccCCChHHEEEeCC-CCEEEeecceeeeccCCCcccccccCCccccChhhhcC--------CCCChHHhcCcchHHHHH
Confidence            699999999999977 6899999999986543322 334589999999999853        568899999999999999


Q ss_pred             HHcCCCCCCCCCc---HHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSN---LQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF-----SQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~-----~~~l~~l~~~~~  146 (198)
                      |++|..||.+...   ..... ..........|..+++++.+++.+||..||.+||++     .++++  |.|+.
T Consensus       382 lltG~~PF~~~~~~~~~~~~~-~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~--Hpff~  453 (543)
T 3c4z_A          382 MIAARGPFRARGEKVENKELK-QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT--HPLFR  453 (543)
T ss_dssp             HHHSSCSSCCTTCCCCHHHHH-HHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT--SGGGT
T ss_pred             HHhCCCCCCCCccchhHHHHH-HHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc--Ccccc
Confidence            9999999976532   22222 222334556778899999999999999999999965     67776  55554

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=1.3e-28  Score=193.58  Aligned_cols=134  Identities=11%  Similarity=0.146  Sum_probs=97.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceeccccccccc---ccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVT---LRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++....  .....+| +.|+|||++.+..   ........++.++|||||||++
T Consensus       228 vHrDikp~NIll~~~-~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il  303 (377)
T 3byv_A          228 VHTYLRPVDIVLDQR-GGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI  303 (377)
T ss_dssp             ECSCCCGGGEEECTT-CCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCC-CCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence            699999999999977 6899999999985433  2345678 9999999986410   0000002688999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |||++|..||.+.......      ......+..+++++.+++.+||..||.+||++.++++  +.|+.
T Consensus       304 ~elltg~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~--hp~f~  364 (377)
T 3byv_A          304 YWIWCADLPITKDAALGGS------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME--TPEYE  364 (377)
T ss_dssp             HHHHHSSCCC------CCS------GGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT--SHHHH
T ss_pred             HHHHHCCCCCcccccccch------hhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh--ChHHH
Confidence            9999999999754421110      0111223568999999999999999999999999998  55544

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.95  E-value=1.2e-27  Score=181.58  Aligned_cols=133  Identities=28%  Similarity=0.541  Sum_probs=105.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+.+.+||+|||++...... ......||+.|+|||++.         ..++.++|+||+|+++|+|
T Consensus       153 ~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~---------~~~~~~~Di~slG~~l~~l  222 (290)
T 1t4h_A          153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFMAPEMYE---------EKYDESVDVYAFGMCMLEM  222 (290)
T ss_dssp             CCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-SBEESCSSCCCCCGGGGG---------TCCCTHHHHHHHHHHHHHH
T ss_pred             EECCCCHHHEEEECCCCCEEEeeCCCccccccc-ccccccCCcCcCCHHHHh---------ccCCCcchHHHHHHHHHHH
Confidence            799999999999844478999999999654332 223457899999999874         3578999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|..||.+................ ...+...++++.+++.+||..||.+||++.++++  +.|+
T Consensus       223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~--h~~f  286 (290)
T 1t4h_A          223 ATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN--HAFF  286 (290)
T ss_dssp             HHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGG
T ss_pred             HhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh--Cccc
Confidence            9999999886665555444433322 2345567899999999999999999999999998  5554

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=4.2e-28  Score=196.44  Aligned_cols=139  Identities=24%  Similarity=0.426  Sum_probs=109.1

Q ss_pred             CCCCCCCCCeEEcC--CCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTP--DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~--~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.  ..+.+||+|||+++...........+||+.|+|||++.         +.++.++||||+||++|
T Consensus       148 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~  218 (484)
T 3nyv_A          148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---------GTYDEKCDVWSTGVILY  218 (484)
T ss_dssp             CCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHH---------TCCCTHHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeec---------CCCCCcceeHHHHHHHH
Confidence            79999999999952  23679999999997554443344567999999999974         35789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      +|++|..||.+...................+  ..+++++.+|+.+||..||.+|||+.++++  |.|+.....
T Consensus       219 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~--h~~~~~~~~  290 (484)
T 3nyv_A          219 ILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD--HEWIQTYTK  290 (484)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT--SHHHHHHTC
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh--Chhhccccc
Confidence            9999999999876544433333322222222  458899999999999999999999999999  778776543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=7e-28  Score=183.73  Aligned_cols=136  Identities=24%  Similarity=0.413  Sum_probs=107.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+ +.+||+|||++.......    ......||..|+|||++.+        ..++.++|+||+|++
T Consensus       148 ~H~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  218 (302)
T 4e5w_A          148 VHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ--------SKFYIASDVWSFGVT  218 (302)
T ss_dssp             ECSCCSGGGEEEEET-TEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             ccCCCchheEEEcCC-CCEEECcccccccccCCCcceeccCCCCCCccccCCeeecC--------CCCCcchhHHHHHHH
Confidence            699999999999876 689999999997543322    2234568889999998854        456789999999999


Q ss_pred             HHHHHcCCCCCCC--------------CCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           77 LWELLTNRLPFEG--------------MSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        77 l~e~~~g~~p~~~--------------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +|++++|..|+..              ...................+..+++++.+++.+||..||.+|||+.++++.|+
T Consensus       219 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~  298 (302)
T 4e5w_A          219 LHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE  298 (302)
T ss_dssp             HHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            9999999887532              11222223334445566677889999999999999999999999999999998


Q ss_pred             HHH
Q 029154          143 AFL  145 (198)
Q Consensus       143 ~~~  145 (198)
                      .++
T Consensus       299 ~ll  301 (302)
T 4e5w_A          299 ALL  301 (302)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=3.5e-28  Score=187.58  Aligned_cols=139  Identities=27%  Similarity=0.550  Sum_probs=84.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++............||..|+|||++....    ....++.++||||||+++|+|
T Consensus       148 vH~dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~~Di~slG~il~~l  222 (327)
T 3aln_A          148 IHRDIKPSNILLDRS-GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA----SRQGYDVRSDVWSLGITLYEL  222 (327)
T ss_dssp             CCSCCCGGGEEEETT-TEEEECCCSSSCC----------------------------------CCSHHHHHHHHHHHHHH
T ss_pred             eECCCCHHHEEEcCC-CCEEEccCCCceecccccccccCCCCccccCceeecccc----CcCCCCchhhHHHHHHHHHHH
Confidence            799999999999976 789999999997654443334457899999999973210    124578999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||.+................+.++    ..+++++.+++.+||..||.+||++.++++  +.|+.
T Consensus       223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~--hp~~~  290 (327)
T 3aln_A          223 ATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK--HPFIL  290 (327)
T ss_dssp             HHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT--SHHHH
T ss_pred             HHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh--ChHHH
Confidence            99999998654322221111122222222    358899999999999999999999999998  55554

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=2e-27  Score=178.15  Aligned_cols=136  Identities=29%  Similarity=0.555  Sum_probs=109.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||++.......  ......++..|+|||++.+        ..++.++|+||+|+++|
T Consensus       126 ~H~dl~p~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~  196 (267)
T 3t9t_A          126 IHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKSDVWSFGVLMW  196 (267)
T ss_dssp             CCSSCCGGGEEECGG-GCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             ccCCCchheEEECCC-CCEEEcccccccccccccccccccccccccccChhhhcC--------CCccchhchhhhHHHHH
Confidence            699999999999866 679999999997543321  1233457789999999853        56789999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++++ |..||.+..... .............+..+++.+.+++.+||..||.+||++.+++++|+.+..
T Consensus       197 ~l~~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          197 EVFSEGKIPYENRSNSE-VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhccCCCCCCCCCHHH-HHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999 899998765433 333344444556677789999999999999999999999999999998764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.95  E-value=3.4e-28  Score=187.17  Aligned_cols=143  Identities=23%  Similarity=0.429  Sum_probs=109.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||++.......    ......++..|+|||++.+        ..++.++||||+|++
T Consensus       156 vH~Dikp~Nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  226 (318)
T 3lxp_A          156 IHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE--------YKFYYASDVWSFGVT  226 (318)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             cCCCCchheEEEcCC-CCEEECCccccccccccccccccccCCCCCceeeChHHhcC--------CCCCcHHHHHHHHHH
Confidence            699999999999976 679999999997543321    1233467889999999853        456789999999999


Q ss_pred             HHHHHcCCCCCCCCCcH--------------HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNL--------------QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      +|++++|..||......              ...............+..+++++.+++.+||..||.+||++.++++.|+
T Consensus       227 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  306 (318)
T 3lxp_A          227 LYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK  306 (318)
T ss_dssp             HHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            99999999998642211              0111222334455667889999999999999999999999999999999


Q ss_pred             HHHhhcCCCC
Q 029154          143 AFLFTLRPPS  152 (198)
Q Consensus       143 ~~~~~~~~~~  152 (198)
                      .+......+.
T Consensus       307 ~l~~~~~~~~  316 (318)
T 3lxp_A          307 TVHEKYQGQA  316 (318)
T ss_dssp             HHHHHHHC--
T ss_pred             HHHHhhccCC
Confidence            9887665543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.95  E-value=3.1e-28  Score=193.46  Aligned_cols=142  Identities=20%  Similarity=0.316  Sum_probs=103.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +++||+|||+++.......  ....+||+.|+|||++...... .....++.++|+||+||++|
T Consensus       184 iHrDLKp~NILld~~-g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~-~~~~~~~~~~DiwSlGvily  261 (412)
T 2vd5_A          184 VHRDIKPDNILLDRC-GHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG-PGTGSYGPECDWWALGVFAY  261 (412)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTC-TTCSEECTHHHHHHHHHHHH
T ss_pred             eecccCHHHeeecCC-CCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccC-cCCCCCChHHhhhHHhHHHH
Confidence            699999999999976 7899999999975433222  2346899999999998520000 00245789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHc---cCCCCCCCCCcHHHHHHHHHhcccCCCCC---CCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFK---HARPGLPEDISPDLAFIVQSCWVEDPNLR---PSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~l~~~~l~~dp~~R---ps~~~~l~~l~~~~~~  147 (198)
                      ||++|..||.+.............   ...+..+..+++++.+|+.+||. +|.+|   ++++++++  |.|+..
T Consensus       262 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~--Hpff~~  333 (412)
T 2vd5_A          262 EMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT--HPFFFG  333 (412)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT--SGGGTT
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc--CCCcCC
Confidence            999999999886654433222211   11222346799999999999999 99998   58999988  777653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=1.4e-27  Score=183.68  Aligned_cols=135  Identities=29%  Similarity=0.550  Sum_probs=108.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++......   ......+|+.|+|||++.+        ..++.++||||+|+++
T Consensus       160 ~H~dikp~NIli~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  230 (322)
T 1p4o_A          160 VHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD--------GVFTTYSDVWSFGVVL  230 (322)
T ss_dssp             BCSCCSGGGEEECTT-CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccCCCccceEEEcCC-CeEEECcCccccccccccccccccCCCCCCCccChhhhcc--------CCCCchhhHHHHHHHH
Confidence            699999999999976 689999999997543322   1223456889999999753        5678999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |++++ |..||.+..... .............+..+++.+.+++.+||..||.+||++.+++++|+..+
T Consensus       231 ~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          231 WEIATLAEQPYQGLSNEQ-VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHTSCCTTTTSCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHhcCCCccccCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            99999 889998766433 33334444555667789999999999999999999999999999987653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=5.7e-28  Score=185.83  Aligned_cols=143  Identities=22%  Similarity=0.369  Sum_probs=103.1

Q ss_pred             CCCCCCCCCeEE----cCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLL----TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll----~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||+    +.+ +.+||+|||+++............||..|+|||++............++.++||||+||+
T Consensus       134 vH~Dlkp~NIll~~~~~~~-~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~i  212 (319)
T 4euu_A          134 VHRNIKPGNIMRVIGEDGQ-SVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (319)
T ss_dssp             ECSCCSGGGEEEEECTTSC-EEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHH
T ss_pred             ecCCCCHHHEEEeccCCCC-ceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHH
Confidence            699999999998    544 569999999998665544455678999999999875311111113567899999999999


Q ss_pred             HHHHHcCCCCCCCCCc---HHHHHHHHHccCCC------------------------CCCCCCcHHHHHHHHHhcccCCC
Q 029154           77 LWELLTNRLPFEGMSN---LQAAYAAAFKHARP------------------------GLPEDISPDLAFIVQSCWVEDPN  129 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~---~~~~~~~~~~~~~~------------------------~~p~~~~~~~~~l~~~~l~~dp~  129 (198)
                      +|||++|..||.....   ............+.                        .++..++..+.+++.+||..||.
T Consensus       213 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  292 (319)
T 4euu_A          213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE  292 (319)
T ss_dssp             HHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTT
T ss_pred             HHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChh
Confidence            9999999999964332   11222222222211                        11122456788999999999999


Q ss_pred             CCCCHHHHHHHHHHH
Q 029154          130 LRPSFSQIIRMLNAF  144 (198)
Q Consensus       130 ~Rps~~~~l~~l~~~  144 (198)
                      +||+++|++++..+-
T Consensus       293 ~R~s~~ell~h~~d~  307 (319)
T 4euu_A          293 KCWGFDQFFAETSDI  307 (319)
T ss_dssp             TSCCHHHHHHHHHHH
T ss_pred             hhccHHHhhhccHHH
Confidence            999999999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.95  E-value=3.3e-27  Score=183.77  Aligned_cols=141  Identities=28%  Similarity=0.356  Sum_probs=105.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----------cccCCCCccceecccccccccccccccCCCCchhh
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVD   69 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~D   69 (198)
                      |||||||+|||++.+ +.+||+|||+++......           .....+||+.|+|||++..       ...++.++|
T Consensus       134 vH~Dlkp~Nil~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~D  205 (353)
T 2b9h_A          134 IHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT-------SAKYSRAMD  205 (353)
T ss_dssp             ECSCCCGGGEEECTT-CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS-------CCCCCHHHH
T ss_pred             ecCCCCHHHeEEcCC-CcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc-------CCCccchhh
Confidence            699999999999976 679999999997543211           1223478999999998743       356789999


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCC------------------------------CCCCCCcHHHHHH
Q 029154           70 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP------------------------------GLPEDISPDLAFI  119 (198)
Q Consensus        70 vws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~p~~~~~~~~~l  119 (198)
                      +||+||++|+|++|..||.+................+                              ..+..+++++.++
T Consensus       206 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (353)
T 2b9h_A          206 VWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDL  285 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHH
Confidence            9999999999999999998766433322111100000                              0123578899999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154          120 VQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       120 ~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      +.+||..||.+|||+.++++  +.|+.....+
T Consensus       286 i~~~L~~dP~~Rpt~~ell~--hp~~~~~~~~  315 (353)
T 2b9h_A          286 LQRMLVFDPAKRITAKEALE--HPYLQTYHDP  315 (353)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT--SGGGTTTCCT
T ss_pred             HHHhcCcCcccCCCHHHHhc--CccccccCCc
Confidence            99999999999999999999  7887765544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.95  E-value=9.7e-28  Score=190.34  Aligned_cols=139  Identities=20%  Similarity=0.288  Sum_probs=95.8

Q ss_pred             CCCCCCCCCeEE----cCCCCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLL----TPDQKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll----~~~~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||+    +.+ +.+||+|||+++.....    ......+||+.|+|||++.+       ...++.++||||
T Consensus       150 vH~Dlkp~NIll~~~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwS  221 (405)
T 3rgf_A          150 LHRDLKPANILVMGEGPER-GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-------ARHYTKAIDIWA  221 (405)
T ss_dssp             CCCCCCGGGEEECCSSTTT-TCEEECCTTCCC----------------CCCTTCCHHHHTT-------CCSCCHHHHHHH
T ss_pred             eCCCcCHHHeEEecCCCCC-CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcC-------CCcccchhhhHH
Confidence            799999999999    433 67999999999754322    22344678999999999853       245889999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCcH---------HHHHHH--HHccCCCC----------------------------------
Q 029154           73 FGIVLWELLTNRLPFEGMSNL---------QAAYAA--AFKHARPG----------------------------------  107 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~~~~~~---------~~~~~~--~~~~~~~~----------------------------------  107 (198)
                      +||++|+|++|..||.+....         ......  ........                                  
T Consensus       222 lG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (405)
T 3rgf_A          222 IGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK  301 (405)
T ss_dssp             HHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhh
Confidence            999999999999999765431         111111  11100000                                  


Q ss_pred             CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          108 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       108 ~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      .....++++.+|+.+||..||.+|||+.|+++  |.|+....
T Consensus       302 ~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~--hp~f~~~~  341 (405)
T 3rgf_A          302 HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ--DPYFLEDP  341 (405)
T ss_dssp             TTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGTSSS
T ss_pred             cCCCCCHHHHHHHHHHccCCcccCCCHHHHhc--ChhhccCC
Confidence            00112678899999999999999999999999  88876544

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.95  E-value=1.2e-27  Score=187.39  Aligned_cols=138  Identities=26%  Similarity=0.342  Sum_probs=105.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++.......    ....+||+.|+|||++..       ...++.++||||+||+
T Consensus       150 vH~Dikp~NIl~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~i  221 (364)
T 3qyz_A          150 LHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-------SKGYTKSIDIWSVGCI  221 (364)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHT-------BCSCSTHHHHHHHHHH
T ss_pred             ecCCCChHhEEECCC-CCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcC-------CCCCCcchhHHHHHHH
Confidence            699999999999976 6799999999975443221    234589999999998643       3457899999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHc----------------------cCC--CC-----CCCCCcHHHHHHHHHhcccC
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFK----------------------HAR--PG-----LPEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~--~~-----~p~~~~~~~~~l~~~~l~~d  127 (198)
                      +|+|++|..||.+.............                      ...  ..     ....+++++.+|+.+||..|
T Consensus       222 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  301 (364)
T 3qyz_A          222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN  301 (364)
T ss_dssp             HHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCC
Confidence            99999999999876543332211100                      000  00     12457889999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhhc
Q 029154          128 PNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |.+|||+.++++  +.|+...
T Consensus       302 P~~R~t~~e~l~--hp~~~~~  320 (364)
T 3qyz_A          302 PHKRIEVEQALA--HPYLEQY  320 (364)
T ss_dssp             TTTSCCHHHHHT--SGGGTTT
T ss_pred             hhhCCCHHHHhc--Ccchhhc
Confidence            999999999999  7777654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.95  E-value=1.7e-27  Score=190.43  Aligned_cols=141  Identities=28%  Similarity=0.336  Sum_probs=99.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----------------------cccCCCCccceeccccccccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----------------------MMTAETGTYRWMAPELYSTVTLR   57 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~   57 (198)
                      |||||||+|||++.+ +.+||+|||+++......                       .....+||+.|+|||++..    
T Consensus       151 vHrDlkp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~----  225 (432)
T 3n9x_A          151 IHRDLKPANCLLNQD-CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL----  225 (432)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT----
T ss_pred             CCCCCCHHHeEECCC-CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc----
Confidence            699999999999977 689999999998543221                       2355789999999998643    


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHcC-----------CCCCCCCCc-----------------HHHHHH-----------
Q 029154           58 QGEKKHYNNKVDVYSFGIVLWELLTN-----------RLPFEGMSN-----------------LQAAYA-----------   98 (198)
Q Consensus        58 ~~~~~~~~~~~Dvws~G~~l~e~~~g-----------~~p~~~~~~-----------------~~~~~~-----------   98 (198)
                         ...++.++||||+||++|||++|           .++|.+...                 ......           
T Consensus       226 ---~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~  302 (432)
T 3n9x_A          226 ---QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTED  302 (432)
T ss_dssp             ---CSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHH
T ss_pred             ---CCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHH
Confidence               35689999999999999999974           444444321                 000000           


Q ss_pred             -----------HHHccCCCCC-------CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCC
Q 029154           99 -----------AAFKHARPGL-------PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus        99 -----------~~~~~~~~~~-------p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                                 ..........       ...+++++.+|+.+||..||.+|||++|+++  |.|+.....+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~--Hp~f~~~~~~  371 (432)
T 3n9x_A          303 DLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD--HPYLKDVRKK  371 (432)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT--CGGGTTTCCT
T ss_pred             HHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc--ChhhhhccCc
Confidence                       0001111111       1357899999999999999999999999999  8888765543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.94  E-value=9.5e-28  Score=191.23  Aligned_cols=138  Identities=25%  Similarity=0.383  Sum_probs=96.5

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.++  ..+||+|||+++...........+||+.|+|||++.+.     ....++.++|+||+||++|
T Consensus       261 vHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~DiwslG~il~  335 (419)
T 3i6u_A          261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV-----GTAGYNRAVDCWSLGVILF  335 (419)
T ss_dssp             CCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC---------CTTHHHHHHHHHHHHHH
T ss_pred             cccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecC-----CCCCCCchhhhHhHHHHHH
Confidence            7999999999997432  35999999999876655545567899999999997421     1256788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC---CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP---GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      +|++|..||.+.................   ..+..+++.+.+++.+||..||.+||++.++++  +.|+
T Consensus       336 ~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~--hp~~  403 (419)
T 3i6u_A          336 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR--HPWL  403 (419)
T ss_dssp             HHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGG
T ss_pred             HHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC--Cccc
Confidence            9999999997654322222222222211   122458899999999999999999999999998  5554

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.94  E-value=2.4e-27  Score=178.94  Aligned_cols=134  Identities=29%  Similarity=0.573  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++......  .....++..|+|||++.+        ..++.++|+||+|+++|++
T Consensus       139 ~H~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l  207 (278)
T 1byg_A          139 VHRDLAARNVLVSED-NVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALRE--------KKFSTKSDVWSFGILLWEI  207 (278)
T ss_dssp             CCSCCSGGGEEECTT-SCEEECCCCC--------------CCTTTSCHHHHHH--------CCCCHHHHHHHHHHHHHHH
T ss_pred             cccCCCcceEEEeCC-CcEEEeecccccccccc--ccCCCccccccCHHHhCC--------CCCCchhcHHHHHHHHHHH
Confidence            699999999999976 67999999998754332  123457889999999853        5678999999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++ |..||....... .............+..+++.+.+++.+||..||.+||++.++++.|+.+..
T Consensus       208 ~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          208 YSFGRVPYPRIPLKD-VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             HTTSCCSCTTSCGGG-HHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            98 999998765432 223333444566778899999999999999999999999999999988754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.94  E-value=1.1e-27  Score=180.57  Aligned_cols=133  Identities=24%  Similarity=0.436  Sum_probs=105.5

Q ss_pred             CCCCCCCCCeEE---cCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLL---TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll---~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||+   +.+ +.+||+|||++.............||+.|+|||++.         +.++.++|+||+|+++
T Consensus       128 ~H~dlkp~Nil~~~~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~---------~~~~~~~Di~slG~~l  197 (277)
T 3f3z_A          128 AHRDLKPENFLFLTDSPD-SPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE---------GLYGPECDEWSAGVMM  197 (277)
T ss_dssp             ECCCCSGGGEEESSSSTT-CCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT---------TCBCTTHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEecCCCC-CcEEEEecccceeccCccchhccCCCCCccChHHhc---------ccCCchhhehhHHHHH
Confidence            699999999999   544 679999999997655444455668999999999874         3478999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCC----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLP----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++++|..||.+...........  ......+    ..+++++.+++.+||..||.+||++.++++  +.|+..
T Consensus       198 ~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~--h~~~~~  267 (277)
T 3f3z_A          198 YVLLCGYPPFSAPTDSEVMLKIR--EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE--HEWFEK  267 (277)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT--SHHHHH
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHH--hCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc--CHHHhc
Confidence            99999999998766544332222  2222333    258899999999999999999999999998  666654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.94  E-value=4.8e-27  Score=177.81  Aligned_cols=136  Identities=21%  Similarity=0.336  Sum_probs=109.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+ +.+||+|||++...... ......|+..|+|||++.+        ..++.++|+||+|+++|++
T Consensus       136 ~H~dl~p~Nil~~~~-~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l  205 (284)
T 2vgo_A          136 IHRDIKPENLLMGYK-GELKIADFGWSVHAPSL-RRRTMCGTLDYLPPEMIEG--------KTHDEKVDLWCAGVLCYEF  205 (284)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCTTCEECSSS-CBCCCCSCGGGCCHHHHTT--------CCBCTTHHHHHHHHHHHHH
T ss_pred             eecCCCHHHEEEcCC-CCEEEecccccccCccc-ccccccCCCCcCCHHHhcc--------CCCCcccchhhHHHHHHHH
Confidence            699999999999976 67999999998654322 2234678999999999853        5678899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      ++|..||..........  .........|..++.++.+++.+||..||.+||++.++++  +.|+.....
T Consensus       206 ~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~--h~~~~~~~~  271 (284)
T 2vgo_A          206 LVGMPPFDSPSHTETHR--RIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME--HPWVKANSR  271 (284)
T ss_dssp             HHSSCTTCCSSHHHHHH--HHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT--CHHHHHHCC
T ss_pred             HHCCCCCCCCCHhHHHH--HHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh--CHHHHhhcc
Confidence            99999998766433322  2233455677889999999999999999999999999999  677765443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.94  E-value=1.8e-27  Score=180.30  Aligned_cols=137  Identities=28%  Similarity=0.523  Sum_probs=110.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+||+++.+ +.+||+|||++.......  ......+++.|+|||++.+        ..++.++|+||+|+++|
T Consensus       133 ~H~dikp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~  203 (288)
T 3kfa_A          133 IHRDLAARNCLVGEN-HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSDVWAFGVLLW  203 (288)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             cCCCCCcceEEEcCC-CCEEEccCccceeccCCccccccCCccccCcCChhhhcc--------CCCCchhhHHHHHHHHH
Confidence            799999999999866 679999999997544322  1223346778999999853        56889999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++++ |..||.+..... .............+..+++++.+++.+||..||.+||++.++++.|+.++..
T Consensus       204 ~ll~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          204 EIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             HHHTTSCCSSTTCCGGG-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHH-HHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            9999 999998765433 2333444555667788999999999999999999999999999999887653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.94  E-value=9.8e-28  Score=189.30  Aligned_cols=140  Identities=21%  Similarity=0.422  Sum_probs=100.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--------ccccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||++.+ +.+||+|||++......        ......+||+.|+|||++.+      ....++.++||||
T Consensus       150 vHrDlkp~NIll~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~~Diws  222 (389)
T 3gni_B          150 VHRSVKASHILISVD-GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ------NLQGYDAKSDIYS  222 (389)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHST------TSSCBCTHHHHHH
T ss_pred             ecCCCCHHHEEEcCC-CCEEEcccccceeeccccccccccccccccccccccccCHHHHhc------cCCCCCcHhHHHH
Confidence            699999999999976 68999999988633211        11223478999999999853      1256889999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCcHHHHHHHHHcc--------------------------------------------CCCCC
Q 029154           73 FGIVLWELLTNRLPFEGMSNLQAAYAAAFKH--------------------------------------------ARPGL  108 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~  108 (198)
                      +||++|+|++|..||.+..............                                            ...+.
T Consensus       223 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (389)
T 3gni_B          223 VGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPY  302 (389)
T ss_dssp             HHHHHHHHHHSSCTTTTCCSTTHHHHC-----------------------------------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcc
Confidence            9999999999999997654432221111000                                            00123


Q ss_pred             CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          109 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       109 p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +..+++++.+|+.+||..||.+|||+.++++  +.|+....
T Consensus       303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~--hp~f~~~~  341 (389)
T 3gni_B          303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLN--HSFFKQIK  341 (389)
T ss_dssp             ---CCHHHHHHHHHHTCSCTTTSCCHHHHTT--SGGGGGC-
T ss_pred             ccccCHHHHHHHHHHhhcCcccCCCHHHHhc--CHHHHHHh
Confidence            4557889999999999999999999999998  77766544

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.94  E-value=3.6e-27  Score=177.62  Aligned_cols=135  Identities=24%  Similarity=0.412  Sum_probs=99.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.............|++.|+|||++.+       ....+.++|+||+|+++|++
T Consensus       133 ~H~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~~l~~l  204 (276)
T 2h6d_A          133 VHRDLKPENVLLDAH-MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG-------RLYAGPEVDIWSCGVILYAL  204 (276)
T ss_dssp             SCCCCCGGGEEECTT-SCEEECCCCGGGCCCC-------------CCTGGGTT-------SCCCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEECCC-CCEEEeecccccccCCCcceecccCCccccCHHHHcC-------CCCCCccchHHHHHHHHHHH
Confidence            699999999999976 6799999999986554443445678999999999853       22336799999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||........ .. .........|..++..+.+++.+||..||.+||++.++++  +.|+..
T Consensus       205 ~~g~~p~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~--h~~~~~  267 (276)
T 2h6d_A          205 LCGTLPFDDEHVPTL-FK-KIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE--HEWFKQ  267 (276)
T ss_dssp             HHSSCSSCCSSHHHH-HH-HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH--SHHHHT
T ss_pred             HhCCCCCCCCcHHHH-HH-HhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh--Chhhcc
Confidence            999999987654332 22 2233445567788999999999999999999999999999  677654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=1.4e-27  Score=183.83  Aligned_cols=133  Identities=21%  Similarity=0.307  Sum_probs=105.2

Q ss_pred             CCCCCCCCCeEEcCCCC---ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK---SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.++.   .+||+|||+++............||+.|+|||++.+        ..++.++|+||+|+++
T Consensus       137 vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~il  208 (321)
T 2a2a_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY--------EPLGLEADMWSIGVIT  208 (321)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTT--------CCCCTHHHHHHHHHHH
T ss_pred             ecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccC--------CCCCCccccHHHHHHH
Confidence            69999999999986632   699999999986554444455679999999999853        5678999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCC----CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |+|++|..||.+..........  .......    +..+++.+.+++.+||..||.+||++.++++  +.|+
T Consensus       209 ~~l~~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~--hp~~  276 (321)
T 2a2a_A          209 YILLSGASPFLGDTKQETLANI--TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR--HPWI  276 (321)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHH--HTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH--STTT
T ss_pred             HHHHHCCCCCCCCCHHHHHHHH--HhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc--Cccc
Confidence            9999999999876643332222  2222222    2568899999999999999999999999998  5554

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.1e-27  Score=187.07  Aligned_cols=136  Identities=27%  Similarity=0.433  Sum_probs=103.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc--ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT--EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ......+||+.|+|||++.+      ....++.++|||||||++|
T Consensus       181 vH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~~DvwslG~il~  253 (355)
T 1vzo_A          181 IYRDIKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG------GDSGHDKAVDWWSLGVLMY  253 (355)
T ss_dssp             CCCCCCGGGEEECTT-SCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTT------CC---CTHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEECCC-CcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcC------CCCCCCchhhHHHHHHHHH
Confidence            799999999999976 68999999999754322  22234579999999999853      1245788999999999999


Q ss_pred             HHHcCCCCCCCCCc--HHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSN--LQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~  145 (198)
                      +|++|..||.....  .............+..+..++..+.+|+.+||..||.+||     ++.++++  +.|+
T Consensus       254 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~--h~~f  325 (355)
T 1vzo_A          254 ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE--HLFF  325 (355)
T ss_dssp             HHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT--SGGG
T ss_pred             HHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc--Ccch
Confidence            99999999964321  1122222223345667788999999999999999999999     9999998  4444

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=6.8e-28  Score=189.86  Aligned_cols=134  Identities=19%  Similarity=0.273  Sum_probs=100.0

Q ss_pred             CCCCCCCCCeEEcC-CCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTP-DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~-~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++. +.+.+||+|||+++.....  ....+||+.|+|||++.+        ..++.++|||||||++||
T Consensus       181 vHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwSlG~il~e  250 (382)
T 2vx3_A          181 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR--IYQYIQSRFYRSPEVLLG--------MPYDLAIDMWSLGCILVE  250 (382)
T ss_dssp             ECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC--CCSSCSCGGGCCHHHHTT--------CCCCTHHHHHHHHHHHHH
T ss_pred             EcCCCCcccEEEecCCCCcEEEEeccCceecccc--cccccCCccccChHHHcC--------CCCCcHHHHHHHHHHHHH
Confidence            69999999999953 2367999999999765432  345689999999999854        568899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCC----------------CCC------------------C--------------
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPG----------------LPE------------------D--------------  111 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~p~------------------~--------------  111 (198)
                      |++|..||.+................++                ++.                  .              
T Consensus       251 lltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  330 (382)
T 2vx3_A          251 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG  330 (382)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccC
Confidence            9999999998765443322211100000                000                  0              


Q ss_pred             --------------CcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          112 --------------ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       112 --------------~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                                    ..+++.+|+.+||..||.+|||+.++++  +.|+.
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~--hp~f~  377 (382)
T 2vx3_A          331 PGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQ--HSFFK  377 (382)
T ss_dssp             GGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTT--SGGGC
T ss_pred             CCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhc--Ccccc
Confidence                          0147899999999999999999999998  66654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=4.3e-28  Score=186.70  Aligned_cols=139  Identities=24%  Similarity=0.376  Sum_probs=102.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+|||++.+ +.+||+|||+++....   ........||+.|+|||++.+        ..++.++||||||+++
T Consensus       161 vH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~il  231 (321)
T 2qkw_B          161 IHRDVKSINILLDEN-FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIK--------GRLTEKSDVYSFGVVL  231 (321)
T ss_dssp             ECSCCCSTTEEECTT-CCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHH--------CBCCTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCC-CCEEEeecccccccccccccccccccCCCccccCHHHhcC--------CCCCcccchHhHHHHH
Confidence            699999999999976 6899999999974322   111233468999999999853        5678999999999999


Q ss_pred             HHHHcCCCCCCCCCcHH-----HHHHHHHccC------CCC----CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQ-----AAYAAAFKHA------RPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~-----~~~~~~~~~~------~~~----~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |++++|+.||.+.....     ..........      .+.    .+...+..+.+++.+||..||.+||++.+++++|+
T Consensus       232 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  311 (321)
T 2qkw_B          232 FEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE  311 (321)
T ss_dssp             HHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            99999999986543211     1000011000      111    12224567889999999999999999999999999


Q ss_pred             HHHhhc
Q 029154          143 AFLFTL  148 (198)
Q Consensus       143 ~~~~~~  148 (198)
                      ..+...
T Consensus       312 ~~l~~~  317 (321)
T 2qkw_B          312 YALRLQ  317 (321)
T ss_dssp             HHHHSS
T ss_pred             HHhhcc
Confidence            887643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=9.6e-28  Score=185.46  Aligned_cols=138  Identities=24%  Similarity=0.327  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcCC----CCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD----QKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~----~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+    .+.+||+|||+++..... ......+||..|+|||++.+       ...++.++||||+||
T Consensus       154 vH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~  226 (329)
T 3gbz_A          154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG-------SRHYSTSVDIWSIAC  226 (329)
T ss_dssp             CCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTT-------CCCCCTHHHHHHHHH
T ss_pred             ECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcC-------CCCCCcHHHHHHHHH
Confidence            799999999999532    245999999999744322 22344578999999999853       345799999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCC----------------------------CCCCcHHHHHHHHHhcccC
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL----------------------------PEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------p~~~~~~~~~l~~~~l~~d  127 (198)
                      ++|+|++|..||.+................+..                            +..+++++.+|+.+||..|
T Consensus       227 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  306 (329)
T 3gbz_A          227 IWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD  306 (329)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence            999999999999887765444333221111100                            0116789999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhh
Q 029154          128 PNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~  147 (198)
                      |.+|||+.++++  +.|+..
T Consensus       307 P~~R~t~~e~l~--hp~f~~  324 (329)
T 3gbz_A          307 PVKRISAKNALE--HPYFSH  324 (329)
T ss_dssp             GGGSCCHHHHHT--SGGGSS
T ss_pred             hhhCCCHHHHhC--CcccCC
Confidence            999999999998  666543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=4.2e-27  Score=180.19  Aligned_cols=143  Identities=26%  Similarity=0.380  Sum_probs=98.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++....... ......|+..|+|||++.+        ..++.++|+||||+++|+
T Consensus       158 ~H~dl~p~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~~  228 (310)
T 2wqm_A          158 MHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--------NGYNFKSDIWSLGCLLYE  228 (310)
T ss_dssp             CCCCCCGGGEEECTT-SCEEECCC------------------CCSSCCHHHHTT--------CCCCHHHHHHHHHHHHHH
T ss_pred             eCCCCcHHHEEEcCC-CCEEEEeccceeeecCCCccccccCCCeeEeChHHhCC--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 679999999987543322 2234578999999998753        567899999999999999


Q ss_pred             HHcCCCCCCCCCc-HHHHHHHHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcCCCC
Q 029154           80 LLTNRLPFEGMSN-LQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus        80 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~  152 (198)
                      +++|..||.+... .............+.. +..+++++.+++.+||..||.+||++.++++.|+.+......+.
T Consensus       229 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~  303 (310)
T 2wqm_A          229 MAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL  303 (310)
T ss_dssp             HHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred             HHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence            9999999976432 2222222222222222 35689999999999999999999999999999999988776553

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.94  E-value=2.5e-27  Score=192.83  Aligned_cols=138  Identities=23%  Similarity=0.354  Sum_probs=108.8

Q ss_pred             CCCCCCCCCeEEcCCCC--ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK--SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~--~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.++.  .+||+|||+++...........+||+.|+|||++.         ..++.++||||+||++|
T Consensus       168 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~  238 (504)
T 3q5i_A          168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK---------KKYNEKCDVWSCGVIMY  238 (504)
T ss_dssp             ECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT---------TCBCTHHHHHHHHHHHH
T ss_pred             EeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc---------cCCCchHHHHHHHHHHH
Confidence            69999999999986532  59999999998665544455678999999999874         35789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCC--CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +|++|..||.+...................  ...+++++.+|+.+||..||.+|||+.++++  +.|+....
T Consensus       239 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~--h~~~~~~~  309 (504)
T 3q5i_A          239 ILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN--SRWIKKYA  309 (504)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHHTC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc--CHhhhhch
Confidence            999999999887654433222222211111  2568999999999999999999999999999  77776544

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.94  E-value=2.4e-27  Score=186.15  Aligned_cols=137  Identities=30%  Similarity=0.397  Sum_probs=102.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ....+||+.|+|||++.+       ...++.++||||+||++|+|
T Consensus       166 vH~Dikp~NIll~~~-~~~kL~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~el  235 (371)
T 4exu_A          166 VHRDLKPGNLAVNED-CELKILDFGLARHADAE--MTGYVVTRWYRAPEVILS-------WMHYNQTVDIWSVGCIMAEM  235 (371)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECSTTCC----------CTTCCCTTSCHHHHSC-------CSCCCTTHHHHHHHHHHHHH
T ss_pred             cCCCcCHHHeEECCC-CCEEEEecCcccccccC--cCCcccCccccCHHHhcC-------CCCCCcHHhHHHHHHHHHHH
Confidence            799999999999976 67999999999754322  345678999999998753       35678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC---------------------C--------CCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR---------------------P--------GLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~--------~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+................                     +        ..+..+++++.+|+.+||..||.+|
T Consensus       236 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  315 (371)
T 4exu_A          236 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR  315 (371)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTS
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhc
Confidence            9999999886654433222110000                     0        0123568999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcC
Q 029154          132 PSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~  149 (198)
                      ||+.++++  +.|+....
T Consensus       316 pt~~ell~--hp~f~~~~  331 (371)
T 4exu_A          316 LTAAQALT--HPFFEPFR  331 (371)
T ss_dssp             CCHHHHHT--SGGGTTTC
T ss_pred             CCHHHHhc--CcccccCC
Confidence            99999999  78876544

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.94  E-value=1.1e-27  Score=186.17  Aligned_cols=135  Identities=21%  Similarity=0.407  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCC---ceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK---SLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||+..+.+   .+||+|||+++.... .......+||+.|+|||++.+        ..++.++|+||+||+
T Consensus       138 vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~i  209 (342)
T 2qr7_A          138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER--------QGYDAACDIWSLGVL  209 (342)
T ss_dssp             ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHH--------HHHHHHHHHHHHHHH
T ss_pred             EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcC--------CCCCCccCeeeHhHH
Confidence            69999999999854322   499999999975432 223445689999999999853        447889999999999


Q ss_pred             HHHHHcCCCCCCCCC--cHHHHHHHHHccCCC----CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           77 LWELLTNRLPFEGMS--NLQAAYAAAFKHARP----GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        77 l~e~~~g~~p~~~~~--~~~~~~~~~~~~~~~----~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +|+|++|..||.+..  .......... ....    ..+..+++++.+|+.+||..||.+||++.++++  +.|+.
T Consensus       210 l~ell~g~~Pf~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~--hp~~~  282 (342)
T 2qr7_A          210 LYTMLTGYTPFANGPDDTPEEILARIG-SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR--HPWIV  282 (342)
T ss_dssp             HHHHHHSSCSSCSSTTSCHHHHHHHHH-HCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT--SHHHH
T ss_pred             HHHHhcCCCCCCCCCcCCHHHHHHHHc-cCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc--CCeec
Confidence            999999999997632  2222222222 2222    223568999999999999999999999999999  66664

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=8.4e-28  Score=187.71  Aligned_cols=132  Identities=26%  Similarity=0.313  Sum_probs=98.4

Q ss_pred             CCCCCCCCCeEEcC------------------------CCCceEEecccCcccCcccccccCCCCccceecccccccccc
Q 029154            1 MGKFMKEDNLLLTP------------------------DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTL   56 (198)
Q Consensus         1 iH~dlKp~NIll~~------------------------~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~   56 (198)
                      |||||||+|||++.                        ..+.+||+|||+++.....  ....+||+.|+|||++.+   
T Consensus       159 vHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~---  233 (360)
T 3llt_A          159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILN---  233 (360)
T ss_dssp             ECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTT---
T ss_pred             eeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcC---
Confidence            69999999999974                        1367999999999754332  245679999999999853   


Q ss_pred             cccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCC------------------------CCC---
Q 029154           57 RQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP------------------------GLP---  109 (198)
Q Consensus        57 ~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------~~p---  109 (198)
                           ..++.++||||+||++|+|++|..||.+.................                        ..|   
T Consensus       234 -----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  308 (360)
T 3llt_A          234 -----LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENA  308 (360)
T ss_dssp             -----CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTC
T ss_pred             -----CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccc
Confidence                 568999999999999999999999998766443322111100000                        001   


Q ss_pred             -----------------CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154          110 -----------------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus       110 -----------------~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                                       ...++.+.+|+.+||+.||.+|||+.++++  +.|
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~--hp~  358 (360)
T 3llt_A          309 SSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK--HKF  358 (360)
T ss_dssp             SCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT--SGG
T ss_pred             cchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc--Ccc
Confidence                             112367889999999999999999999998  444

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.94  E-value=3.5e-27  Score=197.17  Aligned_cols=137  Identities=28%  Similarity=0.579  Sum_probs=109.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc--cCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM--TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++........  ....+++.|+|||++.+        ..++.++||||||+++|
T Consensus       513 vHrDikp~NILl~~~-~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwSlG~il~  583 (656)
T 2j0j_A          513 VHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF--------RRFTSASDVWMFGVCMW  583 (656)
T ss_dssp             CCSCCSGGGEEEEET-TEEEECCCCCCCSCCC----------CCGGGCCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             cccccchHhEEEeCC-CCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcC--------CCCCchhhHHHHHHHHH
Confidence            799999999999976 78999999999865433221  22456789999999853        56899999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ||++ |..||.+...... .........+..|..+++.+.+++.+||..||.+||++.++++.|+.++..
T Consensus       584 ellt~g~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          584 EILMHGVKPFQGVKNNDV-IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             HHHTTSCCTTTTCCHHHH-HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCHHHH-HHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            9997 9999988665433 333344555667888999999999999999999999999999999987653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.6e-27  Score=182.58  Aligned_cols=139  Identities=27%  Similarity=0.397  Sum_probs=100.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||++...... ......+||..|+|||++.+       ...++.++|+||+|+++|+
T Consensus       124 vH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~il~~  195 (311)
T 4agu_A          124 IHRDVKPENILITKH-SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG-------DTQYGPPVDVWAIGCVFAE  195 (311)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECC------------GGGCCHHHHHT-------CSCCCTHHHHHHHHHHHHH
T ss_pred             cCCCCChhhEEEcCC-CCEEEeeCCCchhccCcccccCCCcCCccccChHHHhc-------CCCCCcchhhHHHHHHHHH
Confidence            699999999999976 68999999999754422 22345678999999998753       3567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHc-------------------cCCCCC----------CCCCcHHHHHHHHHhcccCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFK-------------------HARPGL----------PEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~~~----------p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      +++|..||.+.............                   ....+.          ...+++++.+++.+||..||.+
T Consensus       196 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  275 (311)
T 4agu_A          196 LLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTE  275 (311)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhh
Confidence            99999999887654433221110                   000011          1347888999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhcC
Q 029154          131 RPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       131 Rps~~~~l~~l~~~~~~~~  149 (198)
                      |||++++++  +.|+....
T Consensus       276 Rpt~~ell~--hp~f~~~~  292 (311)
T 4agu_A          276 RLTCEQLLH--HPYFENIR  292 (311)
T ss_dssp             SCCHHHHHT--SGGGTTCC
T ss_pred             cCCHHHHhc--ChHHHhcc
Confidence            999999999  77776544

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.94  E-value=3.9e-27  Score=181.50  Aligned_cols=140  Identities=26%  Similarity=0.424  Sum_probs=100.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+|||++.+ +.+||+|||++...... .......|++.|+|||++....   .....++.++||||||+++|+
T Consensus       151 vH~dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~~~~~~Di~slG~il~~  226 (326)
T 2x7f_A          151 IHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE---NPDATYDFKSDLWSLGITAIE  226 (326)
T ss_dssp             CCCCCSGGGEEECTT-CCEEECCCTTTC-------------CCGGGCCHHHHC-----------CCTTHHHHHHHHHHHH
T ss_pred             cccCCcHHHEEEcCC-CCEEEeeCcCceecCcCccccccccCCccccChhhhcccc---ccCcCCCccchHHHHHHHHHH
Confidence            699999999999966 67999999998754322 1223457899999999975210   012467889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..||.+...................+..++..+.+++.+||..||.+||++.++++  +.|+.
T Consensus       227 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--hp~~~  291 (326)
T 2x7f_A          227 MAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK--HPFIR  291 (326)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT--SHHHH
T ss_pred             HHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh--ChHHh
Confidence            999999998776554443333322333335668999999999999999999999999999  66665

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=1.9e-27  Score=180.73  Aligned_cols=139  Identities=27%  Similarity=0.506  Sum_probs=107.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++...+.+||+|||++...... .......|+..|+|||++.+      ....++.++|+||||+++|+
T Consensus       144 ~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~~Di~slG~il~~  217 (295)
T 2clq_A          144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK------GPRGYGKAADIWSLGCTIIE  217 (295)
T ss_dssp             ECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHH------GGGGCSHHHHHHHHHHHHHH
T ss_pred             EccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcC------CCCCCCcHHHHHHHHHHHHH
Confidence            699999999999874478999999999754322 22344678999999999753      12347889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHH-HHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAA-YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++|..||......... .........+.++..+++++.+++.+||..||.+||++.++++  +.|+..
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--~~~~~~  284 (295)
T 2clq_A          218 MATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV--DEFLKV  284 (295)
T ss_dssp             HHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT--SGGGCC
T ss_pred             HHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc--Chhhhh
Confidence            99999999765443322 2223334556778889999999999999999999999999998  666553

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.94  E-value=1.5e-27  Score=186.45  Aligned_cols=139  Identities=22%  Similarity=0.290  Sum_probs=98.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............||+.|+|||++.+       ...++.++||||+||++|++
T Consensus       156 vH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~il~~l  227 (362)
T 3pg1_A          156 VHRDLHPGNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ-------FKGFTKLVDMWSAGCVMAEM  227 (362)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECCTTC---------------CGGGCCHHHHTT-------CTTCCTHHHHHHHHHHHHHH
T ss_pred             EecCCChHHEEEcCC-CCEEEEecCcccccccccccceecccceecCcHHhcC-------CCCCCcHhHHHhHHHHHHHH
Confidence            799999999999976 6799999999975544444455678999999998753       35678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccC----------------------CCC--------CCCCCcHHHHHHHHHhcccCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHA----------------------RPG--------LPEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~--------~p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      ++|..||.+...............                      ...        .+...++.+.+|+.+||..||.+
T Consensus       228 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  307 (362)
T 3pg1_A          228 FNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR  307 (362)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhh
Confidence            999999987664333222111000                      001        12346888999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhcC
Q 029154          131 RPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       131 Rps~~~~l~~l~~~~~~~~  149 (198)
                      |||+.++++  +.|+....
T Consensus       308 Rpt~~ell~--hp~f~~~~  324 (362)
T 3pg1_A          308 RISTEQALR--HPYFESLF  324 (362)
T ss_dssp             SCCHHHHHT--SGGGTTTC
T ss_pred             CCCHHHHHc--Cchhhhcc
Confidence            999999999  77876554

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.94  E-value=7e-27  Score=182.17  Aligned_cols=137  Identities=29%  Similarity=0.374  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||+++.....  .....||+.|+|||++.+       ...++.++|+||+|+++|+|
T Consensus       148 vH~dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~-------~~~~~~~~Di~slG~il~el  217 (353)
T 3coi_A          148 VHRDLKPGNLAVNED-CELKILDFGLARHADAE--MTGYVVTRWYRAPEVILS-------WMHYNQTVDIWSVGCIMAEM  217 (353)
T ss_dssp             CCSSCCGGGEEECTT-CCEEECSTTCTTC----------CCSBCCSCHHHHSC-------CSCCCTTHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEeECCC-CcEEEeecccccCCCCC--ccccccCcCcCCHHHHhC-------cCCCCchhhHHHHHHHHHHH
Confidence            799999999999976 67999999999754322  234578999999998753       25678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHc----------------------c-------CCCCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFK----------------------H-------ARPGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~----------------------~-------~~~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+.............                      .       .....+..+++++.+++.+||..||.+|
T Consensus       218 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  297 (353)
T 3coi_A          218 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR  297 (353)
T ss_dssp             HHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccC
Confidence            9999999876644332211110                      0       0012234578999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcC
Q 029154          132 PSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~  149 (198)
                      |++.++++  +.|+....
T Consensus       298 pt~~e~l~--hp~f~~~~  313 (353)
T 3coi_A          298 LTAAQALT--HPFFEPFR  313 (353)
T ss_dssp             CCHHHHHT--SGGGTTTC
T ss_pred             CCHHHHhc--Ccchhhcc
Confidence            99999998  77776443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.94  E-value=3.7e-27  Score=182.59  Aligned_cols=136  Identities=29%  Similarity=0.481  Sum_probs=109.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||++..... ........||..|+|||++.+        ..++.++||||||+++|+
T Consensus       163 vH~dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~il~~  233 (335)
T 2owb_A          163 IHRDLKLGNLFLNED-LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK--------KGHSFEVDVWSIGCIMYT  233 (335)
T ss_dssp             ECSCCCGGGEEECTT-CCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHT--------SCBCTHHHHHHHHHHHHH
T ss_pred             EecCCCchhEEEcCC-CCEEEeeccCceecccCcccccccCCCccccCHHHhcc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 6799999999975432 222344678999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |++|..||...........  .......++..+++++.+++.+||..||.+||++.++++  +.|+....
T Consensus       234 l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--~~~~~~~~  299 (335)
T 2owb_A          234 LLVGKPPFETSCLKETYLR--IKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN--DEFFTSGY  299 (335)
T ss_dssp             HHHSSCTTCCSSHHHHHHH--HHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG--SHHHHTSC
T ss_pred             HHHCcCCCCCCCHHHHHHH--HhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc--CccccCCC
Confidence            9999999987654333222  223445667789999999999999999999999999999  77766543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=9.9e-28  Score=190.80  Aligned_cols=129  Identities=12%  Similarity=0.153  Sum_probs=96.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceeccccccccccc--ccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLR--QGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ....+| +.|+|||++.+....  ......++.++|||||||++|
T Consensus       233 iHrDiKp~NILl~~~-~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~  308 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQR-GGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY  308 (413)
T ss_dssp             ECSCCCGGGEEECTT-CCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecC-CeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence            699999999999977 67999999998765433  345678 999999998321000  001245788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ||++|+.||.+....... .     ........+++++.+|+.+||..||.+||++.++++
T Consensus       309 elltg~~Pf~~~~~~~~~-~-----~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          309 WIWCADLPNTDDAALGGS-E-----WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHSSCCCCTTGGGSCS-G-----GGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHCCCCCCCcchhhhH-H-----HHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            999999999765432110 0     011122357899999999999999999999877765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=3.1e-27  Score=178.54  Aligned_cols=132  Identities=27%  Similarity=0.396  Sum_probs=105.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+|||++.+ +.+||+|||++.............|++.|+|||++.+        ..++.++|+||+|+++|+|
T Consensus       144 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l  214 (284)
T 2a19_B          144 INRDLKPSNIFLVDT-KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS--------QDYGKEVDLYALGLILAEL  214 (284)
T ss_dssp             ECSCCSGGGEEEEET-TEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHC--------SCCCTHHHHHHHHHHHHHH
T ss_pred             eeccCCHHHEEEcCC-CCEEECcchhheeccccccccccCCcccccChhhhcc--------CCCcchhhhHHHHHHHHHH
Confidence            699999999999966 6899999999976554443445679999999999853        5678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..|+....   .......   ....+..++.++.+++.+||..||.+||++.+++++|..+...
T Consensus       215 ~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          215 LHVCDTAFETS---KFFTDLR---DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HSCCSSHHHHH---HHHHHHH---TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HhcCCcchhHH---HHHHHhh---cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            99998874211   1111111   2234567899999999999999999999999999999877543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.94  E-value=6e-27  Score=179.84  Aligned_cols=145  Identities=21%  Similarity=0.421  Sum_probs=102.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc------cccccCCCCccceecccccccccccc-cccCCCCchhhHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV------TEMMTAETGTYRWMAPELYSTVTLRQ-GEKKHYNNKVDVYSF   73 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~~~~Dvws~   73 (198)
                      +||||||+|||++ + +.+||+|||+++....      ........|+..|+|||++....... .....++.++|||||
T Consensus       152 ~H~dlkp~NIl~~-~-~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~sl  229 (319)
T 2y4i_B          152 LHKDLKSKNVFYD-N-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL  229 (319)
T ss_dssp             CCCCCCSTTEEEC----CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHH
T ss_pred             cccCCChhhEEEe-C-CCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHH
Confidence            7999999999998 4 5799999999864321      11223346899999999875311000 012457889999999


Q ss_pred             HHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           74 GIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        74 G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |+++|++++|..||.+........ .......+.. +..++.++.+++.+||..||.+||++.++++.|+.+....
T Consensus       230 G~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          230 GTIWYELHAREWPFKTQPAEAIIW-QMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             HHHHHHHHHSSCSSSSCCHHHHHH-HHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHH-HhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            999999999999998766543332 2223333332 3457889999999999999999999999999998765543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=1.1e-27  Score=181.63  Aligned_cols=132  Identities=28%  Similarity=0.492  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCCCCc--------eEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPDQKS--------LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~--------~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||++.+ +.        +||+|||++.......   ...|+..|+|||++.+       ...++.++||||
T Consensus       135 vH~Dlkp~NIll~~~-~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~y~aPE~~~~-------~~~~~~~~Diws  203 (289)
T 4fvq_A          135 IHGNVCAKNILLIRE-EDRKTGNPPFIKLSDPGISITVLPKD---ILQERIPWVPPECIEN-------PKNLNLATDKWS  203 (289)
T ss_dssp             CCCCCCGGGEEEEEC-CBGGGTBCCEEEECCCCSCTTTSCHH---HHHHTTTTSCHHHHHC-------GGGCCHHHHHHH
T ss_pred             ECCCcCcceEEEecC-CcccccccceeeeccCcccccccCcc---ccCCcCcccCHHHhCC-------CCCCCchhHHHH
Confidence            799999999999866 44        9999999987543322   2346788999998753       255789999999


Q ss_pred             HHHHHHHHHcCC-CCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           73 FGIVLWELLTNR-LPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        73 ~G~~l~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +|+++|+|++|. +||..... ......  .......+...++++.+++.+||..||.+|||+.+++++|+.++.
T Consensus       204 lG~il~el~~g~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          204 FGTTLWEICSGGDKPLSALDS-QRKLQF--YEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             HHHHHHHHHTTTCCTTTTSCH-HHHHHH--HHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             HHHHHHHHHcCCCCCccccch-HHHHHH--hhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            999999999955 45554443 222222  223455666778899999999999999999999999999987655

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.94  E-value=6.8e-27  Score=177.80  Aligned_cols=136  Identities=29%  Similarity=0.481  Sum_probs=109.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||++..... ........|++.|+|||++.+        ..++.++|+||+|+++|+
T Consensus       137 ~H~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~~l~~  207 (294)
T 2rku_A          137 IHRDLKLGNLFLNED-LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK--------KGHSFEVDVWSIGCIMYT  207 (294)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTT--------SCBCTHHHHHHHHHHHHH
T ss_pred             cccCCChHhEEEcCC-CCEEEEeccCceecccCccccccccCCCCcCCcchhcc--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 6799999999975432 222344578999999999853        557889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |++|..||..........  .........|..+++.+.+++.+||..||.+||++.++++  +.++....
T Consensus       208 l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~--~~~~~~~~  273 (294)
T 2rku_A          208 LLVGKPPFETSCLKETYL--RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN--DEFFTSGY  273 (294)
T ss_dssp             HHHSSCTTCCSSHHHHHH--HHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG--SHHHHTSC
T ss_pred             HHhCCCCCCCCCHHHHHH--HHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhh--ChheecCC
Confidence            999999998766433322  2233445667889999999999999999999999999999  67766443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.94  E-value=1.7e-27  Score=183.84  Aligned_cols=138  Identities=25%  Similarity=0.440  Sum_probs=87.2

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.++  ..+||+|||+++.... .......+||+.|+|||++.+        ..++.++||||+|+++
T Consensus       128 vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwslG~il  199 (325)
T 3kn6_A          128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ--------NGYDESCDLWSLGVIL  199 (325)
T ss_dssp             ECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------------------CCCCHHHHHHHHHHHH
T ss_pred             eecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcC--------CCCCCccchHHHHHHH
Confidence            6999999999998552  2699999999975432 223345678999999999853        5688999999999999


Q ss_pred             HHHHcCCCCCCCCCcH------HHHHHHHHccCCCCCC----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNL------QAAYAAAFKHARPGLP----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+|++|..||.+....      ..... .........+    ..+++++.+|+.+||..||.+||++.++++  +.|+..
T Consensus       200 ~~ll~g~~pf~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~--h~w~~~  276 (325)
T 3kn6_A          200 YTMLSGQVPFQSHDRSLTCTSAVEIMK-KIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY--NEWLQD  276 (325)
T ss_dssp             HHHHHSSCTTC-------CCCHHHHHH-HHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT--CGGGCT
T ss_pred             HHHHhCCCCCCCCccccccccHHHHHH-HHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc--Chhhcc
Confidence            9999999999764321      12222 2222222222    347899999999999999999999999998  777764


Q ss_pred             cC
Q 029154          148 LR  149 (198)
Q Consensus       148 ~~  149 (198)
                      ..
T Consensus       277 ~~  278 (325)
T 3kn6_A          277 GS  278 (325)
T ss_dssp             TC
T ss_pred             Cc
Confidence            43

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=5.9e-27  Score=182.96  Aligned_cols=137  Identities=26%  Similarity=0.449  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||++...... ......||+.|+|||++.+        ..++.++||||+|+++|+|
T Consensus       154 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l  223 (360)
T 3eqc_A          154 MHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG--------THYSVQSDIWSMGLSLVEM  223 (360)
T ss_dssp             CCSCCSGGGEEECTT-CCEEECCCCCCHHHHHH-C----CCCCTTCCHHHHTT--------CCCSHHHHHHHHHHHHHHH
T ss_pred             EcCCccHHHEEECCC-CCEEEEECCCCcccccc-cccCCCCCCCeECHHHHcC--------CCCCchhhHHHHHHHHHHH
Confidence            699999999999976 67999999998643222 2334578999999999853        5688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHH-----------------------------------------HHHHccCCCCCC-CCCcHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAY-----------------------------------------AAAFKHARPGLP-EDISPDLAF  118 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~p-~~~~~~~~~  118 (198)
                      ++|..||..........                                         ........+..+ ..++.++.+
T Consensus       224 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (360)
T 3eqc_A          224 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQD  303 (360)
T ss_dssp             HHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHH
T ss_pred             HhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHH
Confidence            99999997655322110                                         111112222222 347889999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       119 l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      |+.+||..||.+|||+.++++  |.|+....
T Consensus       304 li~~~L~~dP~~Rpt~~ell~--hp~~~~~~  332 (360)
T 3eqc_A          304 FVNKCLIKNPAERADLKQLMV--HAFIKRSD  332 (360)
T ss_dssp             HHHHHHCSSTTTSCCHHHHHT--SHHHHHHH
T ss_pred             HHHHHhhcChhhCCCHHHHhh--ChHhhcch
Confidence            999999999999999999999  67765443

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.94  E-value=2.2e-27  Score=183.51  Aligned_cols=136  Identities=26%  Similarity=0.438  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... ........|+..|+|||++.+       ...++.++||||+||++|+
T Consensus       146 vH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~Di~slG~il~~  217 (331)
T 4aaa_A          146 IHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG-------DVKYGKAVDVWAIGCLVTE  217 (331)
T ss_dssp             CCCCCCGGGEEECTT-SCEEECCCTTC------------CCCCCTTCCHHHHTT-------CTTCCTHHHHHHHHHHHHH
T ss_pred             EccCcChheEEEcCC-CcEEEEeCCCceeecCCccccCCCcCCccccCcccccC-------CCCcchHHHHHHHHHHHHH
Confidence            799999999999976 6899999999975433 222345678999999999853       2467899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC-----------------CCC------------CCCCcHHHHHHHHHhcccCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR-----------------PGL------------PEDISPDLAFIVQSCWVEDPNL  130 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------~~~------------p~~~~~~~~~l~~~~l~~dp~~  130 (198)
                      |++|..||.+................                 ...            ...+++.+.+|+.+||..||.+
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  297 (331)
T 4aaa_A          218 MFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK  297 (331)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCccc
Confidence            99999999887654433222111000                 000            1246889999999999999999


Q ss_pred             CCCHHHHHHHHHHHHh
Q 029154          131 RPSFSQIIRMLNAFLF  146 (198)
Q Consensus       131 Rps~~~~l~~l~~~~~  146 (198)
                      ||++.++++  +.|+.
T Consensus       298 Rpt~~ell~--hp~f~  311 (331)
T 4aaa_A          298 RPFCAELLH--HDFFQ  311 (331)
T ss_dssp             SCCGGGGGG--SHHHH
T ss_pred             CCCHHHHhc--Cchhc
Confidence            999999998  66654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=5e-28  Score=186.54  Aligned_cols=127  Identities=28%  Similarity=0.407  Sum_probs=94.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-------------ccccCCCCccceecccccccccccccccCCCCch
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-------------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNK   67 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~   67 (198)
                      |||||||+|||++.+ +.+||+|||+++.....             ......+||+.|+|||++.+        ..++.+
T Consensus       186 vH~Dlkp~NIll~~~-~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~  256 (332)
T 3qd2_B          186 MHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG--------NNYSHK  256 (332)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHC--------CCCCTH
T ss_pred             eecCCCcccEEEeCC-CCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcC--------CCCcch
Confidence            699999999999976 68999999999754332             12234579999999999853        568999


Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           68 VDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        68 ~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +||||+|+++|+|++|..|+..   .............+..+...++++.+++.+||..||.+||++.++++
T Consensus       257 ~Di~slG~il~el~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          257 VDIFSLGLILFELLYSFSTQME---RVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHHHHHHHHHSCCCCHHH---HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHcCCChhH---HHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            9999999999999998776521   11112222222222222345678899999999999999999999998

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=1.3e-27  Score=180.39  Aligned_cols=130  Identities=28%  Similarity=0.387  Sum_probs=103.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||+++...... ......|+..|+|||++.+        ..++.++|+||+|+++|+
T Consensus       138 vH~dl~p~NIl~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~  208 (279)
T 2w5a_A          138 LHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR--------MSYNEKSDIWSLGCLLYE  208 (279)
T ss_dssp             CCCCCSGGGEEECSS-SCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHC--------C-CCHHHHHHHHHHHHHH
T ss_pred             EEeccchhhEEEcCC-CCEEEecCchheeeccccccccccCCCccccChHHhcc--------CCCCchhhHHHHHHHHHH
Confidence            799999999999976 679999999987543221 1223468899999999853        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      +++|..||....... ............++..+++++.+++.+||..||.+||++.+++++
T Consensus       209 l~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  268 (279)
T 2w5a_A          209 LCALMPPFTAFSQKE-LAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  268 (279)
T ss_dssp             HHHSSCSSCCSSHHH-HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHCCCCCcccCHHH-HHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            999999998765433 233333444556777899999999999999999999999999983

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=5.2e-27  Score=179.85  Aligned_cols=139  Identities=24%  Similarity=0.344  Sum_probs=97.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +||||||+|||++.+ +.+||+|||++.......  ......|+..|+|||++.+        ..++.++|+||||+++|
T Consensus       156 ~H~dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~  226 (309)
T 2h34_A          156 THRDVKPENILVSAD-DFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSE--------SHATYRADIYALTCVLY  226 (309)
T ss_dssp             CCSCCCGGGEEECTT-SCEEECSCCC----------------CCGGGCCGGGTCC------------CCCHHHHHHHHHH
T ss_pred             CcCCCChHHEEEcCC-CCEEEecCccCccccccccccccccCCCcCccCHHHHcC--------CCCCchHhHHHHHHHHH
Confidence            699999999999976 679999999987543321  2234578999999999853        56788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCC--CCCCCCCcHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHhhcC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLPEDISPDLAFIVQSCWVEDPNLRP-SFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~l~~dp~~Rp-s~~~~l~~l~~~~~~~~  149 (198)
                      ++++|..||.+.... ...........  ...+..+++++.+++.+||..||.+|| +++++++.|+.++....
T Consensus       227 ~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          227 ECLTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             HHHHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             HHHHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            999999999875432 22222222211  134566889999999999999999999 99999999988765443

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=8.9e-27  Score=179.75  Aligned_cols=137  Identities=26%  Similarity=0.498  Sum_probs=107.7

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      +||||||+|||++.+  +..+||+|||+++......   ......|++.|+|||++.+        ..++.++||||||+
T Consensus       162 ~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~  233 (327)
T 2yfx_A          162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME--------GIFTSKTDTWSFGV  233 (327)
T ss_dssp             CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHH--------CCCCHHHHHHHHHH
T ss_pred             ecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcC--------CCCCchhhHHHHHH
Confidence            699999999999843  2469999999986332211   1223457889999998853        56789999999999


Q ss_pred             HHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           76 VLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        76 ~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|++++ |..||.+..... .............+..+++.+.+++.+||..||.+||++.+++++|..+..
T Consensus       234 il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          234 LLWEIFSLGYMPYPSKSNQE-VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HHHHHHTTSCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCcCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            9999998 899998765433 333344445566677899999999999999999999999999999987755

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.94  E-value=5.2e-27  Score=180.03  Aligned_cols=142  Identities=21%  Similarity=0.326  Sum_probs=104.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+++.+||+|||+++.....    .......++..|+|||++..       ...++.++|+||||++
T Consensus       142 ~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~i  214 (320)
T 2i6l_A          142 LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS-------PNNYTKAIDMWAAGCI  214 (320)
T ss_dssp             BCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHC-------TTCCCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcC-------cccCCchhhhHhHHHH
Confidence            699999999999865578999999999754321    11223457889999998743       3567899999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccC-----------------------CC-----CCCCCCcHHHHHHHHHhcccCC
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHA-----------------------RP-----GLPEDISPDLAFIVQSCWVEDP  128 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------~~-----~~p~~~~~~~~~l~~~~l~~dp  128 (198)
                      +|++++|..||.+...............                       .+     ..+..++.++.+++.+||..||
T Consensus       215 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  294 (320)
T 2i6l_A          215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP  294 (320)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCc
Confidence            9999999999988765433222111100                       00     1124578999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHhhcCCC
Q 029154          129 NLRPSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       129 ~~Rps~~~~l~~l~~~~~~~~~~  151 (198)
                      .+||++.++++  +.|+.....+
T Consensus       295 ~~Rpt~~ell~--hp~~~~~~~p  315 (320)
T 2i6l_A          295 MDRLTAEEALS--HPYMSIYSFP  315 (320)
T ss_dssp             GGSCCHHHHHT--SHHHHTTCC-
T ss_pred             cccCCHHHHhC--CcccccccCc
Confidence            99999999999  7787755443

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=1.3e-26  Score=177.16  Aligned_cols=136  Identities=24%  Similarity=0.351  Sum_probs=104.8

Q ss_pred             CCCCCCCCCeEE---cCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLL---TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll---~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||++   +.+ +.+||+|||+++..... ......|++.|+|||++.+        ..++.++|+||+|+++
T Consensus       128 ~H~dikp~NIl~~~~~~~-~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  197 (304)
T 2jam_A          128 VHRDLKPENLLYLTPEEN-SKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQ--------KPYSKAVDCWSIGVIT  197 (304)
T ss_dssp             CCCSCCGGGCEESSSSTT-CCEEBCSCSTTCCCCCB-TTHHHHSCCCBCCTTTBSS--------CSCCHHHHHHHHHHHH
T ss_pred             cccCCCHHHEEEecCCCC-CCEEEccCCcceecCCC-ccccccCCCCccChHHhcc--------CCCCchhhHHHHHHHH
Confidence            699999999999   434 67999999998754322 1223468999999999853        5678999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccC--CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHA--RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++++|..||.+...............  ....+..+++++.+++.+||..||.+||++.++++  +.|+...
T Consensus       198 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~--h~~~~~~  268 (304)
T 2jam_A          198 YILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS--HPWIDGN  268 (304)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT--SHHHHSS
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc--CccccCC
Confidence            999999999987664333222222211  22334568999999999999999999999999999  7776643

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.94  E-value=1.3e-26  Score=177.03  Aligned_cols=135  Identities=30%  Similarity=0.517  Sum_probs=108.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++....... ......|++.|+|||++.+        ..++.++|+||||+++|+
T Consensus       141 ~H~dl~p~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~  211 (303)
T 3a7i_A          141 IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--------SAYDSKADIWSLGITAIE  211 (303)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             ccCCCChheEEECCC-CCEEEeecccceecCccccccCccCCCcCccCHHHHhc--------CCCCchhhhHHHHHHHHH
Confidence            699999999999976 679999999997544322 2344678999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +++|..||......... ........+..+..++..+.+++.+||..||.+||++.++++  +.++..
T Consensus       212 l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--~~~~~~  276 (303)
T 3a7i_A          212 LARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK--HKFILR  276 (303)
T ss_dssp             HHHSSCTTTTSCHHHHH-HHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT--CHHHHH
T ss_pred             HccCCCCCCCcCHHHHH-HHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh--Chhhhc
Confidence            99999999876654333 233344555667789999999999999999999999999999  555543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=3e-27  Score=183.21  Aligned_cols=144  Identities=23%  Similarity=0.442  Sum_probs=102.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++......     ......||+.|+|||++.+....  ....++.++||||||+
T Consensus       169 vH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~~~~~~Di~slG~  245 (342)
T 1b6c_B          169 AHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM--KHFESFKRADIYAMGL  245 (342)
T ss_dssp             ECSCCSGGGEEECTT-SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCT--TCHHHHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEECCC-CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccc--cccccCCcccHHHHHH
Confidence            699999999999976 689999999997433221     22445799999999998541000  0002236899999999


Q ss_pred             HHHHHHcC----------CCCCCCCCc----HHHHHHHHH-ccCCCCCCC-----CCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           76 VLWELLTN----------RLPFEGMSN----LQAAYAAAF-KHARPGLPE-----DISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        76 ~l~e~~~g----------~~p~~~~~~----~~~~~~~~~-~~~~~~~p~-----~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|||++|          ..||.....    ......... ....+.++.     ..+..+.+++.+||..||.+||++.
T Consensus       246 il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  325 (342)
T 1b6c_B          246 VFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL  325 (342)
T ss_dssp             HHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHH
Confidence            99999999          778865421    222222221 222333332     2346789999999999999999999


Q ss_pred             HHHHHHHHHHhh
Q 029154          136 QIIRMLNAFLFT  147 (198)
Q Consensus       136 ~~l~~l~~~~~~  147 (198)
                      +++++|+.+...
T Consensus       326 ~i~~~L~~i~~~  337 (342)
T 1b6c_B          326 RIKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH
Confidence            999999988654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=1.6e-26  Score=177.28  Aligned_cols=145  Identities=24%  Similarity=0.425  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccc---cccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQ---GEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~---~~~~~~~~~~Dvws~G   74 (198)
                      +||||||+|||++ + +.+||+|||+++......   ......|++.|+|||++.+.....   .....++.++||||||
T Consensus       149 vH~dlkp~NIl~~-~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG  226 (313)
T 3cek_A          149 VHSDLKPANFLIV-D-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  226 (313)
T ss_dssp             CCCCCCGGGEEEE-T-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHH
T ss_pred             eecCCCcccEEEE-C-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHH
Confidence            6999999999997 4 679999999997543321   123457899999999975310000   0013678899999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHH-ccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAF-KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +++|+|++|..||.............. .......+...+.++.+++.+||..||.+||++.++++  +.|+....
T Consensus       227 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~--h~~~~~~~  300 (313)
T 3cek_A          227 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA--HPYVQIQT  300 (313)
T ss_dssp             HHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHCC-
T ss_pred             HHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc--CccccCCC
Confidence            999999999999987654433333322 23334566778899999999999999999999999999  66765433

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.94  E-value=4.6e-27  Score=177.68  Aligned_cols=136  Identities=21%  Similarity=0.333  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCC---ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK---SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.++.   .+||+|||++.............|++.|+|||++.+        ..++.++|+||+|+++
T Consensus       130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il  201 (283)
T 3bhy_A          130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY--------EPLGLEADMWSIGVIT  201 (283)
T ss_dssp             ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTT--------CCCCTHHHHHHHHHHH
T ss_pred             cCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecC--------CCCCcchhhhhHHHHH
Confidence            69999999999986531   699999999976544444445678999999998853        5678999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCC----CCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGL----PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++++|..||.+...........  ......    +..+++.+.+++.+||..||.+||++.++++  +.|+...
T Consensus       202 ~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~--h~~~~~~  272 (283)
T 3bhy_A          202 YILLSGASPFLGETKQETLTNIS--AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE--HSWIKAI  272 (283)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHH--TTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH--CHHHHHH
T ss_pred             HHHHHCCCCCCCcchHHHHHHhH--hcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh--CHHHHHH
Confidence            99999999998766443322221  222222    2467889999999999999999999999998  6665544

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=7e-27  Score=175.97  Aligned_cols=136  Identities=27%  Similarity=0.411  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +|+||||+||+++.+ +.+||+|||++......   .......|+..|+|||++.+       ...++.++|+||+|+++
T Consensus       127 ~H~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~il  198 (276)
T 2yex_A          127 THRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-------REFHAEPVDVWSCGIVL  198 (276)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTC-------SSBCHHHHHHHHHHHHH
T ss_pred             eccCCChHHEEEccC-CCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhc-------CCCCCCcchHHHHHHHH
Confidence            699999999999976 67999999998754321   22345678999999999853       22346789999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++++|..||.................. ......+++.+.+++.+||..||.+||++.++++  +.|+.
T Consensus       199 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~--~~~~~  266 (276)
T 2yex_A          199 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK--DRWYN  266 (276)
T ss_dssp             HHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CTTTT
T ss_pred             HHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc--Ccccc
Confidence            9999999999765543222222222211 1223458899999999999999999999999998  55543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.94  E-value=6.1e-27  Score=180.84  Aligned_cols=136  Identities=19%  Similarity=0.228  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCC------------------CCceEEecccCcccCcccccccCCCCccceecccccccccccccccC
Q 029154            1 MGKFMKEDNLLLTPD------------------QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK   62 (198)
Q Consensus         1 iH~dlKp~NIll~~~------------------~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~   62 (198)
                      |||||||+|||++.+                  .+.+||+|||+++.....  .....||+.|+|||++.+        .
T Consensus       140 vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~--------~  209 (339)
T 1z57_A          140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILA--------L  209 (339)
T ss_dssp             ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTT--------S
T ss_pred             cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhC--------C
Confidence            699999999999863                  246999999999754322  245678999999999853        5


Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHH--HHccCC-----------------------------------
Q 029154           63 HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA--AFKHAR-----------------------------------  105 (198)
Q Consensus        63 ~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~--~~~~~~-----------------------------------  105 (198)
                      .++.++||||+||++||+++|..||.+..........  .....+                                   
T Consensus       210 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (339)
T 1z57_A          210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK  289 (339)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCc
Confidence            6889999999999999999999999876643322111  110000                                   


Q ss_pred             -----CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154          106 -----PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       106 -----~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                           ...+...++++.+|+.+||..||.+|||+.|+++  +.|+...
T Consensus       290 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~--hp~f~~~  335 (339)
T 1z57_A          290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK--HPFFDLL  335 (339)
T ss_dssp             CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT--SGGGGGG
T ss_pred             chhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc--CHHHHHH
Confidence                 0011223577899999999999999999999998  6666543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=7e-27  Score=180.15  Aligned_cols=134  Identities=29%  Similarity=0.438  Sum_probs=97.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc--cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV--TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++....  ........||+.|+|||++.+        ..++.++||||+|+++|
T Consensus       156 vH~Dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~il~  226 (326)
T 3uim_A          156 IHRDVKAANILLDEE-FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST--------GKSSEKTDVFGYGVMLL  226 (326)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHH--------SEECHHHHHHHHHHHHH
T ss_pred             EeCCCchhhEEECCC-CCEEeccCccccccCcccccccccccCCcCccCHHHhcc--------CCCCccccchhHHHHHH
Confidence            699999999999976 6899999999975432  222334569999999999853        45789999999999999


Q ss_pred             HHHcCCCCCCCC-------CcHHHHHHHHHccCC----------CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           79 ELLTNRLPFEGM-------SNLQAAYAAAFKHAR----------PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        79 e~~~g~~p~~~~-------~~~~~~~~~~~~~~~----------~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +|++|..||...       ...............          ...+...+..+.+++.+||..||.+|||+.+++++|
T Consensus       227 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          227 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             HHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             HHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence            999999999511       011110000000000          011112346789999999999999999999999999


Q ss_pred             HH
Q 029154          142 NA  143 (198)
Q Consensus       142 ~~  143 (198)
                      +.
T Consensus       307 ~~  308 (326)
T 3uim_A          307 EG  308 (326)
T ss_dssp             HT
T ss_pred             cC
Confidence            75

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.94  E-value=2.1e-27  Score=187.33  Aligned_cols=116  Identities=20%  Similarity=0.232  Sum_probs=83.7

Q ss_pred             ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCc-----
Q 029154           18 SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN-----   92 (198)
Q Consensus        18 ~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~-----   92 (198)
                      .+||+|||+++.....  ....+||+.|+|||++.+        ..++.++|||||||++|+|++|..||.+...     
T Consensus       234 ~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~  303 (397)
T 1wak_A          234 KVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIG--------SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTR  303 (397)
T ss_dssp             CEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHHT--------SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCH
T ss_pred             ceEecccccccccccc--CccCCCCCcccCChhhcC--------CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCc
Confidence            6999999999754432  345679999999999854        5688999999999999999999999975432     


Q ss_pred             HHHHHHH---HHccCC--------------------------------------CCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           93 LQAAYAA---AFKHAR--------------------------------------PGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        93 ~~~~~~~---~~~~~~--------------------------------------~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      .......   .....+                                      ...+...+..+.+|+.+||..||.+|
T Consensus       304 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  383 (397)
T 1wak_A          304 DEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKR  383 (397)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGS
T ss_pred             hHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhc
Confidence            1111111   100000                                      01122234678899999999999999


Q ss_pred             CCHHHHHHHHHHHH
Q 029154          132 PSFSQIIRMLNAFL  145 (198)
Q Consensus       132 ps~~~~l~~l~~~~  145 (198)
                      ||+.++++  +.|+
T Consensus       384 pt~~e~l~--hp~~  395 (397)
T 1wak_A          384 ATAAECLR--HPWL  395 (397)
T ss_dssp             CCHHHHHT--SGGG
T ss_pred             CCHHHHhh--Cccc
Confidence            99999998  5554

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.94  E-value=1.2e-26  Score=175.83  Aligned_cols=137  Identities=26%  Similarity=0.425  Sum_probs=104.6

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      +|+||||+||+++.++  ..+||+|||++.............|++.|+|||++.         +.++.++|+||+|+++|
T Consensus       143 ~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~---------~~~~~~~Di~slG~~l~  213 (287)
T 2wei_A          143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR---------GTYDEKCDVWSAGVILY  213 (287)
T ss_dssp             CCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHT---------TCCCTHHHHHHHHHHHH
T ss_pred             eccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhc---------CCCCCchhhHhHHHHHH
Confidence            6999999999997542  369999999987554433333446889999999874         34789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ++++|..||.+...................+  ..+++++.+++.+||..||.+||++.++++  +.|+...
T Consensus       214 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--hp~~~~~  283 (287)
T 2wei_A          214 ILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE--HPWIQKY  283 (287)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH--SHHHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc--CHHHhcc
Confidence            9999999998766543332222222222222  468899999999999999999999999998  5665543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.94  E-value=2e-26  Score=176.70  Aligned_cols=136  Identities=29%  Similarity=0.480  Sum_probs=106.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +|+||||+||+++.+ +.+||+|||++...... .......|+..|+|||++.+        ..++.++|+||+|+++|+
T Consensus       147 ~H~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~  217 (314)
T 3com_A          147 IHRDIKAGNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--------IGYNCVADIWSLGITAIE  217 (314)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSS--------SCBCTTHHHHHHHHHHHH
T ss_pred             cCCCcCHHHEEECCC-CCEEEeecccchhhhhhccccCccCCCCCccChhhcCC--------CCCCccccHHHHHHHHHH
Confidence            699999999999976 67999999999754332 22334578999999999853        567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC--CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR--PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +++|..||............. ....  ...+..++..+.+++.+||..||.+||++.++++  +.|+...
T Consensus       218 l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~--~~~~~~~  285 (314)
T 3com_A          218 MAEGKPPYADIHPMRAIFMIP-TNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ--HPFVRSA  285 (314)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHH-HSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT--SHHHHTC
T ss_pred             HHhCCCCCCCCChHHHHHHHh-cCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh--CHHHhcC
Confidence            999999998766544433222 2222  2235567899999999999999999999999999  6776543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=4.9e-27  Score=180.23  Aligned_cols=142  Identities=23%  Similarity=0.405  Sum_probs=98.2

Q ss_pred             CCCCCCCCCeEEcCCCC--ceEEecccCcccCccc--------ccccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPDQK--SLKLADFGLAREETVT--------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~--~~kl~DfGla~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      |||||||+|||++.++.  .+||+|||+++.....        ......+||+.|+|||++.....   ....++.++||
T Consensus       133 vH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~~~Di  209 (316)
T 2ac3_A          133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE---EASIYDKRCDL  209 (316)
T ss_dssp             CCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSH---HHHHHTTTHHH
T ss_pred             eeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccc---cccCCCccccc
Confidence            79999999999986532  3999999998743211        11223469999999998742000   01346789999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcH-------------HHHHHHHHccCCCCCC----CCCcHHHHHHHHHhcccCCCCCCC
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNL-------------QAAYAAAFKHARPGLP----EDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~-------------~~~~~~~~~~~~~~~p----~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ||+||++|+|++|..||.+....             ...............|    ..+++++.+|+.+||..||.+||+
T Consensus       210 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  289 (316)
T 2ac3_A          210 WSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS  289 (316)
T ss_dssp             HHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCC
Confidence            99999999999999999765321             1111122222333333    357899999999999999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 029154          134 FSQIIRMLNAFLFT  147 (198)
Q Consensus       134 ~~~~l~~l~~~~~~  147 (198)
                      +.++++  +.|+..
T Consensus       290 ~~e~l~--hp~~~~  301 (316)
T 2ac3_A          290 AAQVLQ--HPWVQG  301 (316)
T ss_dssp             HHHHHH--STTCC-
T ss_pred             HHHHhc--ChhhcC
Confidence            999999  666554

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.94  E-value=1e-26  Score=180.79  Aligned_cols=137  Identities=20%  Similarity=0.242  Sum_probs=101.1

Q ss_pred             CCCCCCCCCeEEcC------------------CCCceEEecccCcccCcccccccCCCCccceecccccccccccccccC
Q 029154            1 MGKFMKEDNLLLTP------------------DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK   62 (198)
Q Consensus         1 iH~dlKp~NIll~~------------------~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~   62 (198)
                      |||||||+|||+..                  ..+.+||+|||+++.....  .....||+.|+|||++.+        .
T Consensus       145 vH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~--------~  214 (355)
T 2eu9_A          145 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILE--------L  214 (355)
T ss_dssp             ECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTT--------C
T ss_pred             ccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeec--------C
Confidence            69999999999932                  2367999999999754322  245679999999999853        5


Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHH-ccCCC-----------------------------------
Q 029154           63 HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF-KHARP-----------------------------------  106 (198)
Q Consensus        63 ~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~-~~~~~-----------------------------------  106 (198)
                      .++.++||||+||++|||++|..||.+............ ....+                                   
T Consensus       215 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (355)
T 2eu9_A          215 GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK  294 (355)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC
T ss_pred             CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCC
Confidence            688999999999999999999999987664432211111 00000                                   


Q ss_pred             ------CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154          107 ------GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       107 ------~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                            ......+.++.+|+.+||..||.+|||+.++++  +.|+....
T Consensus       295 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~~~  341 (355)
T 2eu9_A          295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL--HPFFAGLT  341 (355)
T ss_dssp             CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT--SGGGGGCC
T ss_pred             cccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc--ChhhcCCC
Confidence                  000112457889999999999999999999998  77776543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.94  E-value=6.7e-27  Score=180.09  Aligned_cols=128  Identities=23%  Similarity=0.433  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+.+.+||+|||+++..... ......||+.|+|||++.+       ...++.++||||||+++|++
T Consensus       171 vH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~-------~~~~~~~~Di~slG~il~el  242 (320)
T 3a99_A          171 LHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRY-------HRYHGRSAAVWSLGILLYDM  242 (320)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHH-------SCBCHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCHHHEEEeCCCCCEEEeeCccccccccc-cccCCCCCccCCChHHhcc-------CCCCCccchHHhHHHHHHHH
Confidence            699999999999854478999999999765432 2345679999999998753       23346789999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||.....   .     .......+..+++++.+++.+||..||.+||++.++++  +.|+.
T Consensus       243 ~~g~~pf~~~~~---~-----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--hp~~~  298 (320)
T 3a99_A          243 VCGDIPFEHDEE---I-----IRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN--HPWMQ  298 (320)
T ss_dssp             HHSSCSCCSHHH---H-----HHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGGS
T ss_pred             HHCCCCCCChhh---h-----hcccccccccCCHHHHHHHHHHccCChhhCcCHHHHhc--CHhhc
Confidence            999999975321   1     12234456778999999999999999999999999998  55544

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.93  E-value=1.4e-26  Score=176.13  Aligned_cols=141  Identities=24%  Similarity=0.391  Sum_probs=106.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +|+||||+||+++.+ +.+||+|||++.............|++.|+|||++.+...  .....++.++|+||+|+++|++
T Consensus       146 ~H~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~~~Di~slG~~l~~l  222 (298)
T 1phk_A          146 VHRDLKPENILLDDD-MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN--DNHPGYGKEVDMWSTGVIMYTL  222 (298)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHC--TTSCCBCTHHHHHHHHHHHHHH
T ss_pred             ccCCCCcceEEEcCC-CcEEEecccchhhcCCCcccccccCCccccCHHHhccccc--cccccCCcccccHhHHHHHHHH
Confidence            699999999999976 6799999999976554444455679999999998742110  0124578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCC--CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|..||.+...................+  ..++..+.+++.+||..||.+||++.++++  +.|+.
T Consensus       223 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--h~~~~  288 (298)
T 1phk_A          223 LAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA--HPFFQ  288 (298)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT--SGGGC
T ss_pred             HHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh--ChHhh
Confidence            99999998766543332222222222222  357899999999999999999999999998  66654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.93  E-value=8e-27  Score=182.76  Aligned_cols=136  Identities=18%  Similarity=0.250  Sum_probs=98.1

Q ss_pred             CCCCCCCCCeEEcCC-----CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD-----QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~-----~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+     ...+||+|||+++.....  .....||+.|+|||++.+        ..++.++|||||||
T Consensus       154 vH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~  223 (373)
T 1q8y_A          154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLG--------APWGCGADIWSTAC  223 (373)
T ss_dssp             ECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHT--------CCCCTHHHHHHHHH
T ss_pred             EecCCChHHeEEeccCCCcCcceEEEcccccccccCCC--CCCCCCCccccCcHHHhC--------CCCCchHhHHHHHH
Confidence            699999999999532     236999999999754432  345678999999999853        56889999999999


Q ss_pred             HHHHHHcCCCCCCCCCcH-----HHHHHHHH---cc--------------------------------------CCCCCC
Q 029154           76 VLWELLTNRLPFEGMSNL-----QAAYAAAF---KH--------------------------------------ARPGLP  109 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~-----~~~~~~~~---~~--------------------------------------~~~~~p  109 (198)
                      ++|+|++|..||.+....     ........   ..                                      .....+
T Consensus       224 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (373)
T 1q8y_A          224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS  303 (373)
T ss_dssp             HHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC
T ss_pred             HHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCC
Confidence            999999999999754311     11111110   00                                      011223


Q ss_pred             CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154          110 EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       110 ~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ..++.++.+|+.+||..||.+|||+.++++  +.|+...
T Consensus       304 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f~~~  340 (373)
T 1q8y_A          304 KDEAKEISDFLSPMLQLDPRKRADAGGLVN--HPWLKDT  340 (373)
T ss_dssp             HHHHHHHHHHHGGGGCSSTTTCBCHHHHHT--CGGGTTC
T ss_pred             cchHHHHHHHHHHHhccCccccCCHHHHhh--Chhhhcc
Confidence            345678899999999999999999999999  7777654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=9.3e-27  Score=179.63  Aligned_cols=138  Identities=22%  Similarity=0.397  Sum_probs=105.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc----ccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM----MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      +||||||+|||++.+ +.+||+|||+++.......    .....++..|+|||++.+        ..++.++||||+|++
T Consensus       167 vH~dikp~NIli~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i  237 (326)
T 2w1i_A          167 IHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE--------SKFSVASDVWSFGVV  237 (326)
T ss_dssp             ECSCCCGGGEEEEET-TEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             eccCCCcceEEEcCC-CcEEEecCcchhhccccccccccccCCCCceeEECchhhcC--------CCCCchhhHHHHHHH
Confidence            699999999999966 6899999999975433221    223456788999999853        456889999999999


Q ss_pred             HHHHHcCCCCCCCCCcH---------------HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNL---------------QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML  141 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~---------------~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l  141 (198)
                      +|++++|..|+......               .............+.+..+++++.+++.+||..||.+||++.++++.|
T Consensus       238 l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L  317 (326)
T 2w1i_A          238 LYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV  317 (326)
T ss_dssp             HHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            99999999887532100               011122223344566778999999999999999999999999999999


Q ss_pred             HHHHhh
Q 029154          142 NAFLFT  147 (198)
Q Consensus       142 ~~~~~~  147 (198)
                      +.+...
T Consensus       318 ~~l~~~  323 (326)
T 2w1i_A          318 DQIRDQ  323 (326)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887653

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.93  E-value=3.9e-27  Score=186.41  Aligned_cols=146  Identities=23%  Similarity=0.384  Sum_probs=104.5

Q ss_pred             CCCCCCCCCeEE----cCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLL----TPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll----~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||+    +.+ +.+||+|||+++...........+||..|+|||++............++.++|||||||+
T Consensus       134 vH~Dlkp~NIll~~~~~~~-~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~i  212 (396)
T 4eut_A          134 VHRNIKPGNIMRVIGEDGQ-SVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (396)
T ss_dssp             ECCCCCGGGEEEEECTTSC-EEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_pred             EECCcCHHHEEEeecCCCc-eeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHH
Confidence            699999999998    533 569999999998665555555678999999999874311100001346789999999999


Q ss_pred             HHHHHcCCCCCCCCCc---HHHHHHHHHccCCCC------------------------CCCCCcHHHHHHHHHhcccCCC
Q 029154           77 LWELLTNRLPFEGMSN---LQAAYAAAFKHARPG------------------------LPEDISPDLAFIVQSCWVEDPN  129 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~---~~~~~~~~~~~~~~~------------------------~p~~~~~~~~~l~~~~l~~dp~  129 (198)
                      +|||++|..||.....   ............+..                        ++..++..+.+++.+||..||.
T Consensus       213 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~  292 (396)
T 4eut_A          213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE  292 (396)
T ss_dssp             HHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChh
Confidence            9999999999964221   112222222222211                        1122456788999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhh
Q 029154          130 LRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       130 ~Rps~~~~l~~l~~~~~~  147 (198)
                      +||++.++++.+..++..
T Consensus       293 ~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          293 KCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TSCCHHHHHHHHHHHHTC
T ss_pred             hhccHHHHHHHHHHHhhc
Confidence            999999999999888764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.93  E-value=8e-27  Score=175.98  Aligned_cols=133  Identities=26%  Similarity=0.390  Sum_probs=85.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+||+++.+ +.+||+|||++...... .......||+.|+|||++.+        ..++.++|+||+|+++|+
T Consensus       134 ~H~dl~p~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~  204 (278)
T 3cok_A          134 LHRDLTLSNLLLTRN-MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR--------SAHGLESDVWSLGCMFYT  204 (278)
T ss_dssp             ECSSCCGGGEEECTT-CCEEECCCTTCEECC------------------------------------CTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCC-CCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcC--------CCCCchhhHHHHHHHHHH
Confidence            699999999999976 67999999999754322 22234578999999998853        557889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +++|..||.........  ..........|..++.++.+++.+||..||.+||++.++++  +.|+.
T Consensus       205 l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~--h~~~~  267 (278)
T 3cok_A          205 LLIGRPPFDTDTVKNTL--NKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD--HPFMS  267 (278)
T ss_dssp             HHHSSCSSCCCSCC-------CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT--STTTC
T ss_pred             HHhCCCCCCChhHHHHH--HHHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc--Ccccc
Confidence            99999999765432211  11122334557778999999999999999999999999998  55543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.93  E-value=5e-27  Score=180.80  Aligned_cols=134  Identities=25%  Similarity=0.371  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEcCCC--CceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQ--KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~--~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.++  ..+||+|||+++............||+.|+|||++...     ....++.++||||||+++|
T Consensus       136 vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~Di~slG~il~  210 (322)
T 2ycf_A          136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV-----GTAGYNRAVDCWSLGVILF  210 (322)
T ss_dssp             ECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHT-----TTTTCTTHHHHHHHHHHHH
T ss_pred             eccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccC-----CCCCCCchhhHHHHHHHHH
Confidence            6999999999998652  24999999999865443333345689999999986320     1356789999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC---CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP---GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      ++++|..||...................   ..+..+++++.+++.+||..||.+||++.++++
T Consensus       211 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            9999999997654321111111111111   123467899999999999999999999999986

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.93  E-value=8.1e-27  Score=178.32  Aligned_cols=135  Identities=26%  Similarity=0.380  Sum_probs=100.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      +||||||+||+++.+ +.+||+|||+++.....   .......||+.|+|||++.+         .++.++|+||||+++
T Consensus       155 ~H~dlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---------~~~~~~Dv~slG~il  224 (307)
T 2nru_A          155 IHRDIKSANILLDEA-FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG---------EITPKSDIYSFGVVL  224 (307)
T ss_dssp             ECSCCCGGGEEECTT-CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT---------EECTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCC-CcEEEeecccccccccccccccccccCCCcCcCChHHhcC---------CCCccchhHHHHHHH
Confidence            699999999999966 68999999998754321   11234578999999998742         468899999999999


Q ss_pred             HHHHcCCCCCCCCCcHH---HHHHHHHc----------cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQ---AAYAAAFK----------HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~---~~~~~~~~----------~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |++++|..||.+.....   ........          ......+...+..+.+++.+||..||.+||++.+++++|+.+
T Consensus       225 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          225 LEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            99999999997643211   11111110          111112233456789999999999999999999999999876


Q ss_pred             H
Q 029154          145 L  145 (198)
Q Consensus       145 ~  145 (198)
                      .
T Consensus       305 ~  305 (307)
T 2nru_A          305 T  305 (307)
T ss_dssp             C
T ss_pred             h
Confidence            3

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=3e-26  Score=178.01  Aligned_cols=134  Identities=25%  Similarity=0.440  Sum_probs=104.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCc-hhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNN-KVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~-~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||++...... ......|+..|+|||++.+       ...++. ++|+||+|+++|+
T Consensus       174 ~H~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~-------~~~~~~~~~Di~slG~il~~  244 (348)
T 2pml_X          174 CHRDVKPSNILMDKN-GRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSN-------ESSYNGAKVDIWSLGICLYV  244 (348)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSS-------CCCEEHHHHHHHHHHHHHHH
T ss_pred             eecCCChHhEEEcCC-CcEEEeccccccccccc-cccCCCCCcCccCchhhcC-------CCCCCcchhhHHHHHHHHHH
Confidence            699999999999976 68999999999754332 3345678999999999854       124555 9999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCC-------------------CCCcHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLP-------------------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRM  140 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p-------------------~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~  140 (198)
                      +++|..||............ ........|                   ..+++++.+++.+||..||.+||++.++++ 
T Consensus       245 l~~g~~pf~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~-  322 (348)
T 2pml_X          245 MFYNVVPFSLKISLVELFNN-IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK-  322 (348)
T ss_dssp             HHHSSCSSCCSSCSHHHHHH-HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT-
T ss_pred             HHhCCCCCCCCCcHHHHHHH-HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc-
Confidence            99999999876652333222 223333344                   568899999999999999999999999998 


Q ss_pred             HHHHHh
Q 029154          141 LNAFLF  146 (198)
Q Consensus       141 l~~~~~  146 (198)
                       +.|+.
T Consensus       323 -hp~f~  327 (348)
T 2pml_X          323 -HEWLA  327 (348)
T ss_dssp             -SGGGT
T ss_pred             -Ccccc
Confidence             55543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.93  E-value=2.1e-26  Score=176.51  Aligned_cols=129  Identities=26%  Similarity=0.464  Sum_probs=102.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      +||||||+||+++.+.+.+||+|||+++..... ......|+..|+|||++.+       ....+.++||||+|+++|++
T Consensus       161 ~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG~il~~l  232 (312)
T 2iwi_A          161 VHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISR-------HQYHALPATVWSLGILLYDM  232 (312)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHH-------SCBCHHHHHHHHHHHHHHHH
T ss_pred             eecCCChhhEEEeCCCCeEEEEEcchhhhcccC-cccccCCcccccCceeeec-------CCCCCccchHHHHHHHHHHH
Confidence            699999999999844478999999999755432 2345678999999998753       22334589999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||.....        ........+..+++++.+++.+||..||.+||++.++++  +.|+..
T Consensus       233 ~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~--~~~~~~  289 (312)
T 2iwi_A          233 VCGDIPFERDQE--------ILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL--DPWMQT  289 (312)
T ss_dssp             HHSSCSCCSHHH--------HHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH--STTTCC
T ss_pred             HHCCCCCCChHH--------HhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc--ChhhcC
Confidence            999999975221        112344567789999999999999999999999999998  666543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.93  E-value=1.5e-26  Score=179.37  Aligned_cols=137  Identities=23%  Similarity=0.363  Sum_probs=83.9

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+  .+.+||+|||+++..... .....+||+.|+|||++.+        ..++.++||||+|+++|
T Consensus       150 vH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il~  220 (336)
T 3fhr_A          150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVLGP--------EKYDKSCDMWSLGVIMY  220 (336)
T ss_dssp             ECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------------------------------CHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEEecCCCceEEEeccccceecccc-ccccCCCCcCccChhhhCC--------CCCCchhhHHHHHHHHH
Confidence            699999999999753  245999999999754432 2345678999999999843        55788999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHH--HHHH----ccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           79 ELLTNRLPFEGMSNLQAAY--AAAF----KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~--~~~~----~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      ++++|..||.+........  ....    ..........+++++.+|+.+||..||.+|||+.++++  +.|+...
T Consensus       221 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~~~  294 (336)
T 3fhr_A          221 ILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN--HPWINQS  294 (336)
T ss_dssp             HHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH--SHHHHTG
T ss_pred             HHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc--Ccccccc
Confidence            9999999997654322110  0101    11112223568999999999999999999999999999  7777643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=3.1e-26  Score=173.15  Aligned_cols=130  Identities=16%  Similarity=0.283  Sum_probs=101.1

Q ss_pred             CCCCCCCCCeEEcCC------------------CCceEEecccCcccCcccccccCCCCccceecccccccccccccccC
Q 029154            1 MGKFMKEDNLLLTPD------------------QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK   62 (198)
Q Consensus         1 iH~dlKp~NIll~~~------------------~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~   62 (198)
                      |||||||+|||++.+                  ...+||+|||++......   ....||..|+|||++.+       ..
T Consensus       137 vH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~-------~~  206 (289)
T 1x8b_A          137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQE-------NY  206 (289)
T ss_dssp             ECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTT-------CC
T ss_pred             eecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---cccCCCccccChhHhcC-------CC
Confidence            699999999999843                  236899999998755432   23468999999999853       23


Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           63 HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        63 ~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      .++.++||||+|+++|++++|.+++.....    .........+..+..+++++.+++.+||..||.+||++.++++  +
T Consensus       207 ~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--h  280 (289)
T 1x8b_A          207 THLPKADIFALALTVVCAAGAEPLPRNGDQ----WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK--H  280 (289)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----HHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT--C
T ss_pred             CCCchhhHHHHHHHHHHHhcCCCCCcchhH----HHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh--C
Confidence            556799999999999999999887754322    2333445556778889999999999999999999999999998  5


Q ss_pred             HHHh
Q 029154          143 AFLF  146 (198)
Q Consensus       143 ~~~~  146 (198)
                      .|+.
T Consensus       281 ~~~~  284 (289)
T 1x8b_A          281 SVLL  284 (289)
T ss_dssp             TTC-
T ss_pred             hHhh
Confidence            5543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.93  E-value=1.5e-26  Score=176.38  Aligned_cols=139  Identities=27%  Similarity=0.457  Sum_probs=101.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      +||||||+|||++.+ +.+||+|||++..... ........|+..|+|||++.....   ....++.++|+||+|+++|+
T Consensus       139 ~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~~~~~~Di~slG~il~~  214 (302)
T 2j7t_A          139 IHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM---KDTPYDYKADIWSLGITLIE  214 (302)
T ss_dssp             CCCCCSGGGEEECTT-SCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHT---TSTTTTTHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEECCC-CCEEEEECCCCccccccccccccccCChhhcCCeeeccccC---CCCCCchhhhHHHHHHHHHH
Confidence            699999999999976 6799999998753221 112234578999999998732100   13567889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++|..||............. ....+  ..+..++.++.+++.+||..||.+||++.++++  +.|+.
T Consensus       215 l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--h~~~~  280 (302)
T 2j7t_A          215 MAQIEPPHHELNPMRVLLKIA-KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE--HPFVS  280 (302)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHH-HSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT--STTTT
T ss_pred             HhcCCCCCccCCHHHHHHHHh-ccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc--ChHHh
Confidence            999999998766544333222 22222  234568899999999999999999999999988  55543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=9.6e-27  Score=178.66  Aligned_cols=138  Identities=22%  Similarity=0.311  Sum_probs=100.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----------cccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      +||||||+|||++.+ +.+||+|||++.......          ......||+.|+|||++.+.     ....++.++||
T Consensus       156 vH~dlkp~NIl~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~Di  229 (317)
T 2buj_A          156 AHRDLKPTNILLGDE-GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ-----SHCVIDERTDV  229 (317)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC-----SEEEECTHHHH
T ss_pred             ccCCCCHHHEEEcCC-CCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccC-----CCcCCCchhhH
Confidence            699999999999876 679999999987432211          01123578999999987531     01236789999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHH-HHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQ-AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      ||||+++|++++|..||....... ............+.+..+++++.+++.+||..||.+||++.+++++|+.+
T Consensus       230 ~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          230 WSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             HHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence            999999999999999985311000 01111222333344556899999999999999999999999999999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.93  E-value=3.3e-26  Score=179.12  Aligned_cols=134  Identities=16%  Similarity=0.111  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCC----------CCceEEecccCcccC---cccccccCCCCccceecccccccccccccccCCCCch
Q 029154            1 MGKFMKEDNLLLTPD----------QKSLKLADFGLAREE---TVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNK   67 (198)
Q Consensus         1 iH~dlKp~NIll~~~----------~~~~kl~DfGla~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~   67 (198)
                      |||||||+|||++.+          .+.+||+|||+++..   .........+||+.|+|||++.+        ..++.+
T Consensus       194 vHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~  265 (365)
T 3e7e_A          194 IHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN--------KPWNYQ  265 (365)
T ss_dssp             ECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTT--------CCBSTH
T ss_pred             ecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcC--------CCCCcc
Confidence            699999999999861          367999999999643   22333456789999999999854        568999


Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHHHh
Q 029154           68 VDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLR-PSFSQIIRMLNAFLF  146 (198)
Q Consensus        68 ~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~R-ps~~~~l~~l~~~~~  146 (198)
                      +|||||||++|||++|+.||.......      ............++...+++.+||..+|.+| |++.++.+.|+.++.
T Consensus       266 ~DiwslG~il~elltg~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          266 IDYFGVAATVYCMLFGTYMKVKNEGGE------CKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCEEEETTE------EEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCccccCCCCc------eeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence            999999999999999999985432200      0000111111246778899999999999999 688999999988876


Q ss_pred             hc
Q 029154          147 TL  148 (198)
Q Consensus       147 ~~  148 (198)
                      ..
T Consensus       340 ~~  341 (365)
T 3e7e_A          340 QH  341 (365)
T ss_dssp             HH
T ss_pred             Hh
Confidence            53

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.93  E-value=4.6e-26  Score=182.13  Aligned_cols=132  Identities=23%  Similarity=0.357  Sum_probs=91.9

Q ss_pred             CCCCCCCCCeEEcCC----CCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPD----QKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~----~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||++.+    ...+||+|||+++.....    ......+||+.|+|||++...     ....++.++||||
T Consensus       140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~-----~~~~~t~~~DiwS  214 (432)
T 3p23_A          140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED-----CKENPTYTVDIFS  214 (432)
T ss_dssp             CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC--------CCCTHHHHHH
T ss_pred             EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcc-----cccCCCcHHHHHH
Confidence            799999999999532    135789999999754322    123346799999999998531     1245678999999


Q ss_pred             HHHHHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCC---CCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           73 FGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGL---PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        73 ~G~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      +||++|||++ |..||.........  ..........   +...+..+.+|+.+||..||.+||++.++++
T Consensus       215 lG~il~ellt~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          215 AGCVFYYVISEGSHPFGKSLQRQAN--ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHHHHHTTSCBTTBSTTTHHHH--HHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHcCCCCCcchhhHHHHH--HHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            9999999999 88998654433222  2222211111   1224566889999999999999999999996

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.93  E-value=2e-26  Score=175.63  Aligned_cols=135  Identities=27%  Similarity=0.513  Sum_probs=99.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc------ccccCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      +||||||+||+++.+ +.+||+|||++......      .......||+.|+|||++.+       ...++.++|+||+|
T Consensus       143 ~H~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~Di~slG  214 (303)
T 2vwi_A          143 IHRDVKAGNILLGED-GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ-------VRGYDFKADIWSFG  214 (303)
T ss_dssp             CCCCCSGGGEEECTT-CCEEECCCHHHHHCC---------------CCCTTCCHHHHHH-------HHCCCTHHHHHHHH
T ss_pred             CCCCCChhhEEEcCC-CCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc-------ccCCCchhhHHHHH
Confidence            699999999999976 67999999998643221      11234578999999998743       24578999999999


Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHHHccCCC---------CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           75 IVLWELLTNRLPFEGMSNLQAAYAAAFKHARP---------GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      +++|+|++|..||............ .....+         .....++.++.+++.+||..||.+||++.++++  +.|+
T Consensus       215 ~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--h~~~  291 (303)
T 2vwi_A          215 ITAIELATGAAPYHKYPPMKVLMLT-LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR--HKFF  291 (303)
T ss_dssp             HHHHHHHHSSCTTTTSCGGGHHHHH-HTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT--STTC
T ss_pred             HHHHHHHhCCCCCccCchhhHHHHH-hccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh--Chhh
Confidence            9999999999999876654333222 222221         123457889999999999999999999999998  5554


Q ss_pred             h
Q 029154          146 F  146 (198)
Q Consensus       146 ~  146 (198)
                      .
T Consensus       292 ~  292 (303)
T 2vwi_A          292 Q  292 (303)
T ss_dssp             -
T ss_pred             h
Confidence            4

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.92  E-value=6.7e-26  Score=181.33  Aligned_cols=136  Identities=20%  Similarity=0.390  Sum_probs=93.6

Q ss_pred             CCCCCCCCCeEEcCC------------CCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCC
Q 029154            1 MGKFMKEDNLLLTPD------------QKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKH   63 (198)
Q Consensus         1 iH~dlKp~NIll~~~------------~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~   63 (198)
                      |||||||+|||++.+            ...+||+|||+++......     .....+||+.|+|||++.+.... .....
T Consensus       137 vHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~  215 (434)
T 2rio_A          137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNL-QTKRR  215 (434)
T ss_dssp             ECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTT-SCCCC
T ss_pred             cccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhcccccc-ccccC
Confidence            699999999999743            2479999999998543321     12345799999999998531100 01256


Q ss_pred             CCchhhHHHHHHHHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCC-CC----CCCcHHHHHHHHHhcccCCCCCCCHHHH
Q 029154           64 YNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG-LP----EDISPDLAFIVQSCWVEDPNLRPSFSQI  137 (198)
Q Consensus        64 ~~~~~Dvws~G~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~-~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~  137 (198)
                      ++.++||||+||++|||++ |..||.........  ......... .+    ..+++++.+++.+||..||.+||++.++
T Consensus       216 ~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei  293 (434)
T 2rio_A          216 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV  293 (434)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--HhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence            7899999999999999998 89999765543322  111111111 11    1245789999999999999999999999


Q ss_pred             HH
Q 029154          138 IR  139 (198)
Q Consensus       138 l~  139 (198)
                      ++
T Consensus       294 l~  295 (434)
T 2rio_A          294 LR  295 (434)
T ss_dssp             HT
T ss_pred             Hh
Confidence            87

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.92  E-value=8.1e-26  Score=172.01  Aligned_cols=132  Identities=25%  Similarity=0.458  Sum_probs=92.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---------------ccccCCCCccceecccccccccccccccCCCC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---------------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYN   65 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~   65 (198)
                      +||||||+|||++.+ +.+||+|||++......               .......|+..|+|||++.+       ...++
T Consensus       138 ~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~  209 (303)
T 1zy4_A          138 IHRDLKPMNIFIDES-RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-------TGHYN  209 (303)
T ss_dssp             CCSCCCGGGEEECTT-SCEEECCCCCCSCTTC-------------------------CTTSCHHHHTS-------CSCCC
T ss_pred             ecccCCHHhEEEcCC-CCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccC-------CCCCc
Confidence            699999999999976 67999999998754321               12234568999999999753       24678


Q ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHc---cCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           66 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK---HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        66 ~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      .++|+||+|+++|+|++   ||...............   ..++..+...++.+.+++.+||..||.+||++.++++  +
T Consensus       210 ~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--h  284 (303)
T 1zy4_A          210 EKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN--S  284 (303)
T ss_dssp             THHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH--S
T ss_pred             chhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC--C
Confidence            99999999999999998   55432222222222211   1223344557788999999999999999999999998  4


Q ss_pred             HHH
Q 029154          143 AFL  145 (198)
Q Consensus       143 ~~~  145 (198)
                      .|+
T Consensus       285 ~~~  287 (303)
T 1zy4_A          285 GWL  287 (303)
T ss_dssp             SCS
T ss_pred             CCc
Confidence            443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.90  E-value=1.1e-23  Score=174.96  Aligned_cols=130  Identities=25%  Similarity=0.299  Sum_probs=93.5

Q ss_pred             CCCCCCCCCeEEcCCCC--ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK--SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~--~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.++.  .+||+|||++.............||..|+|||++.+        ..++.++||||+|+++|
T Consensus       143 VHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~--------~~~s~ksDIwSLGviLy  214 (676)
T 3qa8_A          143 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ--------KKYTVTVDYWSFGTLAF  214 (676)
T ss_dssp             CCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCC--------SCCSTTHHHHHHHHHHH
T ss_pred             ccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhcc--------CCCCchhHHHHHHHHHH
Confidence            79999999999986532  389999999986655444556789999999999853        67889999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHH--------HH-HHc---------cCCC----CCCCCCcHHHHHHHHHhcccCCCCCCCHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAY--------AA-AFK---------HARP----GLPEDISPDLAFIVQSCWVEDPNLRPSFSQ  136 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~--------~~-~~~---------~~~~----~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~  136 (198)
                      ++++|..||.+........        .. ...         ....    .+...+++.+.+++.+||..||.+||++.+
T Consensus       215 eLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          215 ECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             HHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             HHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence            9999999997643221100        00 000         0000    112235688999999999999999999988


Q ss_pred             HH
Q 029154          137 II  138 (198)
Q Consensus       137 ~l  138 (198)
                      ++
T Consensus       295 lL  296 (676)
T 3qa8_A          295 NP  296 (676)
T ss_dssp             CC
T ss_pred             Hh
Confidence            43

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.88  E-value=4.9e-23  Score=156.99  Aligned_cols=118  Identities=23%  Similarity=0.495  Sum_probs=85.1

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+  .+.+||+|||++....                             ...++.++|+||+||++|
T Consensus       139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-----------------------------~~~~~~~~DiwslG~il~  189 (299)
T 3m2w_A          139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-----------------------------GEKYDKSCDMWSLGVIMY  189 (299)
T ss_dssp             ECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-----------------------------TCGGGGHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEEecCCCCCcEEEeccccccccc-----------------------------cccCCchhhHHHHHHHHH
Confidence            699999999999862  3679999999885321                             123578899999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHH--HHHccCCCCCC----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           79 ELLTNRLPFEGMSNLQAAYA--AAFKHARPGLP----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~--~~~~~~~~~~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      +|++|..||.+.........  ..........+    ..+++++.+++.+||..||.+||++.++++  +.|+....
T Consensus       190 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~--hp~~~~~~  264 (299)
T 3m2w_A          190 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN--HPWIMQST  264 (299)
T ss_dssp             HHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHTGG
T ss_pred             HHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc--Chhhcccc
Confidence            99999999976443221100  00001111222    457899999999999999999999999999  77776543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.87  E-value=1.2e-22  Score=170.70  Aligned_cols=122  Identities=21%  Similarity=0.190  Sum_probs=91.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+  .+||+|||+++.....   ...+||+.|+|||++.+         .++.++|||||||++|+|
T Consensus       204 iHrDlkp~NIll~~~--~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~---------~~~~~sDi~slG~~l~~l  269 (681)
T 2pzi_A          204 VYNDLKPENIMLTEE--QLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRT---------GPTVATDIYTVGRTLAAL  269 (681)
T ss_dssp             ECCCCSGGGEEECSS--CEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHH---------CSCHHHHHHHHHHHHHHH
T ss_pred             eecccChHHeEEeCC--cEEEEecccchhcccC---CccCCCccccCHHHHcC---------CCCCceehhhhHHHHHHH
Confidence            699999999999854  6999999999765432   45679999999998753         348899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCC-CCCCcHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPS-FSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~l~~dp~~Rps-~~~~l~~l~~~~  145 (198)
                      ++|..||.+....         ...... ....++.+.+++.+||..||.+||+ ++++...|..++
T Consensus       270 ~~g~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          270 TLDLPTRNGRYVD---------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             HSCCCEETTEECS---------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HhCCCCCcccccc---------cccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            9999887642110         000000 0113578899999999999999985 566666665544

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.84  E-value=2.3e-22  Score=155.60  Aligned_cols=121  Identities=13%  Similarity=0.105  Sum_probs=85.6

Q ss_pred             CCCCCCCCCeEEcCCC-------------------CceEEecccCcccCcccccccCCCCccceeccccccccccccccc
Q 029154            1 MGKFMKEDNLLLTPDQ-------------------KSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK   61 (198)
Q Consensus         1 iH~dlKp~NIll~~~~-------------------~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~   61 (198)
                      |||||||+|||++.++                   ..+||+|||+++.....    ..+||+.|+|||++.+        
T Consensus       184 vHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g--------  251 (336)
T 2vuw_A          184 EHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG--------  251 (336)
T ss_dssp             BCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC--------
T ss_pred             eECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC--------
Confidence            7999999999999663                   17999999999854432    3478999999999854        


Q ss_pred             CCCCchhhHHHHHHH-HHHHHcCCCCCCCCCcHHHHHHHHHccCC--CC----CCCCCcHHHHHHHHHhcccCCCCCCCH
Q 029154           62 KHYNNKVDVYSFGIV-LWELLTNRLPFEGMSNLQAAYAAAFKHAR--PG----LPEDISPDLAFIVQSCWVEDPNLRPSF  134 (198)
Q Consensus        62 ~~~~~~~Dvws~G~~-l~e~~~g~~p~~~~~~~~~~~~~~~~~~~--~~----~p~~~~~~~~~l~~~~l~~dp~~Rps~  134 (198)
                       ..+.++||||++++ .++++.|..||.+................  ..    .+..+++++.+|+.+||..|     |+
T Consensus       252 -~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa  325 (336)
T 2vuw_A          252 -DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SA  325 (336)
T ss_dssp             -CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred             -CCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence             23789999998776 77788899998532111111112221111  11    12236788999999999976     89


Q ss_pred             HHHH-H
Q 029154          135 SQII-R  139 (198)
Q Consensus       135 ~~~l-~  139 (198)
                      .|++ +
T Consensus       326 ~e~l~~  331 (336)
T 2vuw_A          326 TDLLCQ  331 (336)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            9998 6

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.84  E-value=8.9e-22  Score=149.31  Aligned_cols=113  Identities=17%  Similarity=0.177  Sum_probs=82.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+++|.                   ++               .++.++|||||||++|+|
T Consensus       151 vH~Dikp~NIll~~~-g~~kl~~~~~-------------------~~---------------~~~~~~Di~slG~il~el  195 (286)
T 3uqc_A          151 ALSIDHPSRVRVSID-GDVVLAYPAT-------------------MP---------------DANPQDDIRGIGASLYAL  195 (286)
T ss_dssp             CCCCCSGGGEEEETT-SCEEECSCCC-------------------CT---------------TCCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCcccEEEcCC-CCEEEEeccc-------------------cC---------------CCCchhHHHHHHHHHHHH
Confidence            799999999999976 6788885432                   21               257899999999999999


Q ss_pred             HcCCCCCCCCCcHHHH---HHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           81 LTNRLPFEGMSNLQAA---YAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~---~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ++|+.||.+.......   ..........  ..+..+++++.+++.+||+.||.+| |+.++++.|+.......
T Consensus       196 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          196 LVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             HHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             HHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            9999999875532110   0000000000  1235688999999999999999999 99999999998765443

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.66  E-value=3.2e-18  Score=140.91  Aligned_cols=73  Identities=14%  Similarity=0.085  Sum_probs=44.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+||||+.+ +.+||+|||+++..... ....+.+||+.|++||++.+         .+...+|+||+|++.++
T Consensus       361 IHRDIKPeNILL~~d-g~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g---------~~~~~~d~~s~g~~~~~  430 (569)
T 4azs_A          361 WHDDVRPWNVMVDAR-QHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE---------NKSWNGFWRSAPVHPFN  430 (569)
T ss_dssp             EESCCCGGGEEECTT-SCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC--------------------------CC
T ss_pred             eeccCchHhEEECCC-CCEEEeecccCeeCCCCCccccCceechhhccHHHhCC---------CCCCcccccccccchhh
Confidence            699999999999977 68999999999865432 22345689999999999853         45678999999998776


Q ss_pred             HHcC
Q 029154           80 LLTN   83 (198)
Q Consensus        80 ~~~g   83 (198)
                      +.++
T Consensus       431 l~~~  434 (569)
T 4azs_A          431 LPQP  434 (569)
T ss_dssp             CCTT
T ss_pred             hccc
Confidence            5443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.30  E-value=9.2e-14  Score=113.83  Aligned_cols=79  Identities=18%  Similarity=0.250  Sum_probs=61.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--------ccCCCCccceecccccccccccccccCCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--------MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws   72 (198)
                      |||||||+|||++.   .+||+|||+++.......        ....+||+.|+|||++...      ...|+..+|+|+
T Consensus       453 iHrDiKp~NILl~~---~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~------~~~Y~~~~d~ws  523 (540)
T 3en9_A          453 IHNDLTTSNFIFDK---DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERF------LEGYKSVYDRWE  523 (540)
T ss_dssp             ECTTCCTTSEEESS---SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHH------HHHHHHHCTTHH
T ss_pred             ccCCCCHHHEEECC---eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHH------HHHHHHHHhHHH
Confidence            69999999999995   699999999986543221        1345799999999998531      134667789999


Q ss_pred             HHHHHHHHHcCCCCCC
Q 029154           73 FGIVLWELLTNRLPFE   88 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~~   88 (198)
                      ..+-..+.+.++.+|.
T Consensus       524 ~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          524 IILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHTCSCCC
T ss_pred             HHHHHHHHHHhccccC
Confidence            9988888877766663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.43  E-value=7.6e-08  Score=72.45  Aligned_cols=37  Identities=16%  Similarity=0.152  Sum_probs=30.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceeccccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELY   51 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~   51 (198)
                      |||||||+|||++ + +.+||+|||+++.            +..++|||.+
T Consensus       215 iHrDlkp~NILl~-~-~~vkl~DFG~a~~------------~~~~~a~e~l  251 (282)
T 1zar_A          215 VHGDLSQYNVLVS-E-EGIWIIDFPQSVE------------VGEEGWREIL  251 (282)
T ss_dssp             ECSCCSTTSEEEE-T-TEEEECCCTTCEE------------TTSTTHHHHH
T ss_pred             EeCCCCHHHEEEE-C-CcEEEEECCCCeE------------CCCCCHHHHH
Confidence            6999999999999 5 7899999999863            2345777765

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.28  E-value=2.7e-07  Score=68.45  Aligned_cols=26  Identities=19%  Similarity=0.254  Sum_probs=23.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      |||||||+|||++.   .++|+|||++..
T Consensus       193 vHrDlkp~NILl~~---~~~liDFG~a~~  218 (258)
T 1zth_A          193 VHADLSEYNIMYID---KVYFIDMGQAVT  218 (258)
T ss_dssp             ECSSCSTTSEEESS---SEEECCCTTCEE
T ss_pred             EeCCCCHHHEEEcC---cEEEEECccccc
Confidence            69999999999985   699999999864

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.18  E-value=8.6e-05  Score=58.21  Aligned_cols=28  Identities=14%  Similarity=0.182  Sum_probs=22.2

Q ss_pred             CCCCCCCCCeEEcCCCC---------ceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQK---------SLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---------~~kl~DfGla~   28 (198)
                      |||||||.|||++.++.         .+.|+||+=+.
T Consensus       227 VHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          227 IHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             ECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             cCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            79999999999986531         37899998554

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.11  E-value=6.5e-05  Score=56.78  Aligned_cols=86  Identities=15%  Similarity=0.192  Sum_probs=45.6

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEecccCcccCcccccccCCCCccceeccccccccccccccc-------CCCCchhhHHH
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK-------KHYNNKVDVYS   72 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~-------~~~~~~~Dvws   72 (198)
                      +|+|+++.||+++.+ +..+.|+||+.+.................-..++.... .+..+..       .......+.|+
T Consensus       194 ~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~l~~Y~~~~~~~~~~r~~~~~~~~~  272 (304)
T 3sg8_A          194 IHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSK-ILNHYKHKDIPTVLEKYRMKEKYWS  272 (304)
T ss_dssp             ECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHH-HHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHH-HHHHcCCCCcHHHHHHHHHHHHHHH
Confidence            599999999999964 35678999998763211100000000000011111000 0000000       00112357899


Q ss_pred             HHHHHHHHHcCCCCC
Q 029154           73 FGIVLWELLTNRLPF   87 (198)
Q Consensus        73 ~G~~l~e~~~g~~p~   87 (198)
                      ++.++|.+.+|..+|
T Consensus       273 l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          273 FEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHcCCHHH
Confidence            999999999998776

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.91  E-value=0.00026  Score=51.80  Aligned_cols=27  Identities=11%  Similarity=-0.001  Sum_probs=22.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|++|.|||++.+ +.+.|+|||.+.
T Consensus       187 ~HgDl~~~Nil~~~~-~~~~liD~~~a~  213 (264)
T 1nd4_A          187 THGDACLPNIMVENG-RFSGFIDCGRLG  213 (264)
T ss_dssp             ECSSCCGGGEEEETT-EEEEECCCTTCE
T ss_pred             ECCCCCCCcEEEECC-cEEEEEcchhcc
Confidence            699999999999854 446799999763

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.41  E-value=0.0014  Score=48.19  Aligned_cols=26  Identities=15%  Similarity=0.243  Sum_probs=21.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLA   27 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla   27 (198)
                      +|+|+++.|||++.+ ..+.|+||+.+
T Consensus       186 ~HgDl~~~Nil~~~~-~~~~lIDwe~a  211 (263)
T 3tm0_A          186 SHGDLGDSNIFVKDG-KVSGFIDLGRS  211 (263)
T ss_dssp             ECSSCCTTSEEEETT-EEEEECCCTTC
T ss_pred             ECCCCCcCcEEEECC-cEEEEEEchhc
Confidence            699999999999843 44679999875

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.15  E-value=0.002  Score=49.73  Aligned_cols=29  Identities=24%  Similarity=0.378  Sum_probs=23.6

Q ss_pred             CCCCCCCCCeEEcCCCC-ceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQK-SLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~-~~kl~DfGla~~   29 (198)
                      ||+|+++.|||++.++. .+.|+||+.+..
T Consensus       219 vHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          219 VHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             ECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             EeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            69999999999986532 358999998753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.19  E-value=0.0074  Score=45.82  Aligned_cols=27  Identities=15%  Similarity=0.145  Sum_probs=22.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+++.|||++.+ +.+.|+||+.+.
T Consensus       225 ~HgD~~~~Nil~~~~-~~~~lIDfe~a~  251 (346)
T 2q83_A          225 CHQDYGTGNTLLGEN-EQIWVIDLDTVS  251 (346)
T ss_dssp             ECSSCSTTSEEECGG-GCEEECCCTTCE
T ss_pred             ecCCCCcccEEEeCC-CcEEEEehhhcc
Confidence            699999999999755 568999998763

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.11  E-value=0.0079  Score=47.47  Aligned_cols=27  Identities=11%  Similarity=0.148  Sum_probs=23.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCccc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLARE   29 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~   29 (198)
                      +|+|+++.|||++.+ + ++|+||+.+..
T Consensus       235 iHGDl~~~Nil~~~~-~-~~lID~e~a~~  261 (420)
T 2pyw_A          235 IHGDLHTGSVMVTQD-S-TQVIDPEFSFY  261 (420)
T ss_dssp             ECSCCSGGGEEECSS-C-EEECCCTTCEE
T ss_pred             EecCCCCCcEEEeCC-C-CEEEeCccccc
Confidence            699999999999865 4 99999998753

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.78  E-value=0.013  Score=42.97  Aligned_cols=27  Identities=22%  Similarity=0.212  Sum_probs=22.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|||++.+ +.+-|+||+.+.
T Consensus       196 ~HGDl~~~Nil~~~~-~~~~viDwe~a~  222 (272)
T 4gkh_A          196 THGDFSLDNLIFDEG-KLIGCIDVGRVG  222 (272)
T ss_dssp             ECSCCCTTSEEEETT-EEEEECCCTTCE
T ss_pred             EcCCCCCCeEEEECC-eEEEEEECcccc
Confidence            699999999999854 556699998763

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=94.65  E-value=0.014  Score=44.09  Aligned_cols=28  Identities=21%  Similarity=0.247  Sum_probs=22.6

Q ss_pred             CCCCCCCCCeEEcC---CCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTP---DQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~---~~~~~kl~DfGla~   28 (198)
                      +|+|+++.|||++.   ++..+.|+||+.+.
T Consensus       193 ~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          193 IHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             ECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             EeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence            69999999999986   33445899999764

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.22  E-value=0.015  Score=43.92  Aligned_cols=27  Identities=26%  Similarity=0.279  Sum_probs=22.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+.+.|||++.+ ..+.|+||+.+.
T Consensus       190 iHgDl~~~Nil~~~~-~~~~lIDf~~a~  216 (322)
T 2ppq_A          190 IHADLFQDNVFFLGD-ELSGLIDFYFAC  216 (322)
T ss_dssp             ECSCCCGGGEEEETT-EEEEECCCTTCE
T ss_pred             CCCCCCccCEEEeCC-ceEEEecchhcc
Confidence            699999999999854 445799998763

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.85  E-value=0.018  Score=44.22  Aligned_cols=27  Identities=11%  Similarity=0.165  Sum_probs=22.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+.+.|||++. +..+.|+||+.+.
T Consensus       225 ~HgDl~~~Nil~~~-~~~~~vIDwe~a~  251 (357)
T 3ats_A          225 LWGDARVGNVLYRD-FQPVAVLDWEMVA  251 (357)
T ss_dssp             ECSSCSGGGEEEET-TEEEEECCGGGCE
T ss_pred             EeCCCCCCeEEEeC-CcEEEEEcccccc
Confidence            69999999999984 3457899998763

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.72  E-value=0.031  Score=42.29  Aligned_cols=25  Identities=24%  Similarity=0.251  Sum_probs=21.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+++.|||++ +  .+.|+||+.+.
T Consensus       198 ~HgD~~~~Nil~~-~--~~~lIDfe~a~  222 (328)
T 1zyl_A          198 LHGDCHAGNILWR-D--GPMFVDLDDAR  222 (328)
T ss_dssp             CCSSCSGGGEEES-S--SEEECCCTTCC
T ss_pred             eeCCCCcccEeEc-C--CCEEEECCCCC
Confidence            6999999999998 4  58999998764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.21  E-value=0.03  Score=42.56  Aligned_cols=28  Identities=25%  Similarity=0.393  Sum_probs=23.2

Q ss_pred             CCCCCCCCCeEEcCC---CCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPD---QKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~---~~~~kl~DfGla~   28 (198)
                      ||+|+.+.||+++.+   ...+.|+||+.+.
T Consensus       186 vHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          186 VHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             ECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             EeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            699999999999853   1458999999875

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=92.92  E-value=0.43  Score=34.26  Aligned_cols=72  Identities=17%  Similarity=0.222  Sum_probs=46.2

Q ss_pred             ceecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHh
Q 029154           44 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC  123 (198)
Q Consensus        44 ~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~  123 (198)
                      .+.+||...         ...+.+.-|||+|+++|..+--..|                   ...+..+++++..|+..|
T Consensus       102 ~~~~pe~~~---------~~~te~~~IysLG~tLY~ALDygL~-------------------e~eE~eLS~~LE~LL~~M  153 (229)
T 2yle_A          102 PPVAGKLGY---------SQCMETEVIESLGIIIYKALDYGLK-------------------ENEERELSPPLEQLIDHM  153 (229)
T ss_dssp             -----CCSS---------SSSCHHHHHHHHHHHHHHHHTTTCC-------------------TTEEECCCHHHHHHHHHH
T ss_pred             CCCChhhcc---------ccchHHHHHHHHHHHHHHHhhcCCC-------------------cccchhhCHHHHHHHHHH
Confidence            456777642         2335788899999999988753322                   122345888999999888


Q ss_pred             ccc-------------------------CCCCCCCHHHHHHHHHH
Q 029154          124 WVE-------------------------DPNLRPSFSQIIRMLNA  143 (198)
Q Consensus       124 l~~-------------------------dp~~Rps~~~~l~~l~~  143 (198)
                      ...                         .+..|.++++|++.-..
T Consensus       154 t~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~  198 (229)
T 2yle_A          154 ANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA  198 (229)
T ss_dssp             TTCCC--------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred             HhcccccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence            755                         24577888888876554

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=91.94  E-value=0.063  Score=41.81  Aligned_cols=26  Identities=12%  Similarity=0.120  Sum_probs=22.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.||+++.+  .+++.||..+.
T Consensus       230 ~HGDl~~~Nil~~~~--~~~lID~e~a~  255 (397)
T 2olc_A          230 IHGDLHTGSIFASEH--ETKVIDPEFAF  255 (397)
T ss_dssp             ECSCCSGGGEEECSS--CEEECCCTTCE
T ss_pred             eeCCCCcCcEEEeCC--CeEEEeCcccc
Confidence            599999999999854  38999998764

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=91.68  E-value=0.071  Score=41.11  Aligned_cols=26  Identities=27%  Similarity=0.432  Sum_probs=21.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|||++.+  .+.|+||..+.
T Consensus       215 ~HgDl~~~Nil~~~~--~~~lID~e~a~  240 (369)
T 3c5i_A          215 CHNDLQENNIINTNK--CLRLIDFEYSG  240 (369)
T ss_dssp             ECSCCCGGGEEECC---CEEECCCTTCE
T ss_pred             EeCCCCcccEEecCC--cEEEEEecCCC
Confidence            599999999999844  38999998765

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=90.64  E-value=0.075  Score=40.62  Aligned_cols=27  Identities=15%  Similarity=0.235  Sum_probs=23.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.||+++.+ +.+.|+||+.+.
T Consensus       209 ~HgD~~~~N~l~~~~-~~~~~iD~e~~~  235 (339)
T 3i1a_A          209 CHSDIHAGNVLVGNE-ESIYIIDWDEPM  235 (339)
T ss_dssp             ECSCCCGGGEEECGG-GCEEECCCSSCE
T ss_pred             EeCCCCcCCEEEeCC-CeEEEEECCCCe
Confidence            599999999999854 468999998765

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=90.45  E-value=0.097  Score=41.46  Aligned_cols=15  Identities=27%  Similarity=0.352  Sum_probs=12.9

Q ss_pred             CCCCCCCCCeEEcCC
Q 029154            1 MGKFMKEDNLLLTPD   15 (198)
Q Consensus         1 iH~dlKp~NIll~~~   15 (198)
                      +|+|+.+.|||++.+
T Consensus       252 ~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          252 CHNDLQEGNILLPKA  266 (429)
T ss_dssp             ECSCCCGGGEEEEC-
T ss_pred             EeCCCCCCeEEeeCC
Confidence            599999999999864

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=90.04  E-value=0.12  Score=38.59  Aligned_cols=26  Identities=15%  Similarity=0.064  Sum_probs=21.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.||+.+ + +.+.|+||..+.
T Consensus       176 ~HgDl~~~Nil~~-~-~~~~lID~e~a~  201 (301)
T 3dxq_A          176 CHCDPLCENFLDT-G-ERMWIVDWEYSG  201 (301)
T ss_dssp             ECSCCCGGGEEEC-S-SCEEECCCTTCE
T ss_pred             eccCCCcCCEEEC-C-CCEEEEeccccc
Confidence            5999999999954 4 458999998765

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=89.65  E-value=0.15  Score=40.79  Aligned_cols=13  Identities=15%  Similarity=0.020  Sum_probs=12.2

Q ss_pred             CCCCCCCCCeEEc
Q 029154            1 MGKFMKEDNLLLT   13 (198)
Q Consensus         1 iH~dlKp~NIll~   13 (198)
                      +|+|+.+.|||++
T Consensus       293 cHnDl~~gNIL~~  305 (458)
T 2qg7_A          293 CHCDLLSSNIINT  305 (458)
T ss_dssp             ECSCCCGGGEEEC
T ss_pred             EecCCCCCcEEee
Confidence            5999999999998

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=89.21  E-value=0.17  Score=39.46  Aligned_cols=28  Identities=32%  Similarity=0.466  Sum_probs=23.0

Q ss_pred             CCCCCCCCCeEEcCC---CCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPD---QKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~---~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|||++.+   .+.+.|+||..+.
T Consensus       223 ~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          223 CHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             ECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             EcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            599999999999865   2468999998775

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=86.10  E-value=0.35  Score=37.79  Aligned_cols=28  Identities=29%  Similarity=0.412  Sum_probs=22.6

Q ss_pred             CCCCCCCCCeEEcC-----CCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTP-----DQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~-----~~~~~kl~DfGla~   28 (198)
                      .|+|+.+.|||+..     +...+.++||-.|.
T Consensus       247 cHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          247 CHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             ECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             EEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            49999999999942     33568999998875

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=82.18  E-value=0.55  Score=37.14  Aligned_cols=26  Identities=19%  Similarity=0.460  Sum_probs=21.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.||+ +.+ +.+.|+||..+.
T Consensus       265 ~H~D~~~~N~l-~~~-~~~~~IDwe~a~  290 (424)
T 3mes_A          265 AHNDLQENNLL-QTQ-NNIRMIDYEYSA  290 (424)
T ss_dssp             ECSCCCGGGEE-ECS-SCEEECCCTTCE
T ss_pred             ECCCCCcccee-cCC-CcEEEEecccCC
Confidence            59999999999 534 679999998875

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=80.70  E-value=0.5  Score=34.90  Aligned_cols=21  Identities=19%  Similarity=0.167  Sum_probs=17.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEec
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLAD   23 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~D   23 (198)
                      ||+|+.+.||+++.+ + ..+.|
T Consensus       191 vHGDlw~gNvl~~~~-g-~~~iD  211 (288)
T 3f7w_A          191 IHGDLWNGNVLWQDD-G-AVVID  211 (288)
T ss_dssp             ECSCCSGGGEEEETT-E-EEECS
T ss_pred             eecCCCCCcEEEcCC-C-eEEEe
Confidence            699999999999976 3 55666

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	198
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-38
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	8e-36
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-33
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-32
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-32
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-32
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-31
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-31
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-31
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-31
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-31
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-31
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-30
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-30
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-30
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-30
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-30
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-30
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-29
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-29
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-29
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-29
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-29
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-29
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-28
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-28
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-27
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-27
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-26
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-26
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-26
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-25
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-25
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-25
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-25
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-25
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-25
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-25
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-24
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-23
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	9e-23
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-22
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-22
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-22
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-21
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-21
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-20
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-20
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-19
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-19
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-18
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-17
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-17
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-17
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-16
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-09

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (326), Expect = 7e-38
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N+ L  D  ++K+ DFGLA      + +      +G+  WMAPE+     +R  +K
Sbjct: 130 LKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDK 183

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR----PGLPEDISPDLA 117
             Y+ + DVY+FGIVL+EL+T +LP+  ++N         +         +  +    + 
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
            ++  C  +  + RP F QI+  +     +L
Sbjct: 244 RLMAECLKKKRDERPLFPQILASIELLARSL 274

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 8e-36
 Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K DN+ +T    S+K+ D GLA  +       A  GT  +MAPE+Y         ++ Y
Sbjct: 140 LKCDNIFITGPTGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMY---------EEKY 189

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG-LPEDISPDLAFIVQSC 123
           +  VDVY+FG+ + E+ T+  P+    N    Y       +P    +   P++  I++ C
Sbjct: 190 DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGC 249

Query: 124 WVEDPNLRPSFSQIIR 139
             ++ + R S   ++ 
Sbjct: 250 IRQNKDERYSIKDLLN 265

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 5e-33
 Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 14/146 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR-----EETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           +   N +L      +K+ADFGLAR     E       T      +WMA E   T      
Sbjct: 156 LAARNCMLDEKFT-VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT------ 208

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFI 119
             + +  K DV+SFG++LWEL+T   P     N         +  R   PE     L  +
Sbjct: 209 --QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 266

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFL 145
           +  CW     +RPSFS+++  ++A  
Sbjct: 267 MLKCWHPKAEMRPSFSELVSRISAIF 292

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-32
 Identities = 37/149 (24%), Positives = 59/149 (39%), Gaps = 11/149 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           ++  N+L+  +    K+ADFGLAR  E+             +W APE             
Sbjct: 139 LRAANILVGEN-LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------G 189

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            +  K DV+SFGI+L EL T           +       +  R   P +    L  ++  
Sbjct: 190 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 249

Query: 123 CWVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
           CW ++P  RP+F  +   L  +  +  P 
Sbjct: 250 CWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 3e-32
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+ L   Q ++KL DFGLAR     T    A  GT  +M+PE  +           
Sbjct: 140 LKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR--------MS 190

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN K D++S G +L+EL     PF   S  +       +     +P   S +L  I+   
Sbjct: 191 YNEKSDIWSLGCLLYELCALMPPFTAFSQKE-LAGKIREGKFRRIPYRYSDELNEIITRM 249

Query: 124 WVEDPNLRPSFSQIIR 139
                  RPS  +I+ 
Sbjct: 250 LNLKDYHRPSVEEILE 265

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 4e-32
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 12/135 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLLL      LK+ADFG +     +   T   GT  ++ PE+           + +
Sbjct: 132 IKPENLLLGSA-GELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEG--------RMH 181

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           + KVD++S G++ +E L  + PFE  +  +              P+ ++     ++    
Sbjct: 182 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLL 239

Query: 125 VEDPNLRPSFSQIIR 139
             +P+ RP   +++ 
Sbjct: 240 KHNPSQRPMLREVLE 254

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 1e-31
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 13/145 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           +   N+L+  +    K++DFGL+R    +   T   +      RW APE  S        
Sbjct: 136 LAARNILVNSN-LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY------- 187

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
            + + +  DV+SFGIV+WE++T         +      A     R   P D    +  ++
Sbjct: 188 -RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLM 246

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
             CW ++   RP F+ I+ +L+  +
Sbjct: 247 MQCWQQERARRPKFADIVSILDKLI 271

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 1e-31
 Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 15/149 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           +   N+LL       K++DFGL++    +++     +A     +W APE  +        
Sbjct: 135 LAARNVLLVNRHY-AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF------- 186

Query: 61  KKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFI 119
            + ++++ DV+S+G+ +WE L+  + P++ M   +   A   +  R   P +  P+L  +
Sbjct: 187 -RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPELYAL 244

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
           +  CW+     RP F  + + + A  ++L
Sbjct: 245 MSDCWIYKWEDRPDFLTVEQRMRACYYSL 273

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  114 bits (286), Expect = 1e-31
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 11/152 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL+     +KL DFG A             GT  WMAPE+     +   ++  Y
Sbjct: 141 VKAGNILLSEPGL-VKLGDFGSASIMAPANSFV---GTPYWMAPEV-----ILAMDEGQY 191

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           + KVDV+S GI   EL   + P   M+ + A Y  A   +        S      V SC 
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL 251

Query: 125 VEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
            + P  RP+   +++  + F+   RPP+  + 
Sbjct: 252 QKIPQDRPTSEVLLK--HRFVLRERPPTVIMD 281

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 4e-31
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +   N+L++ D    K++DFGL +E   +          +W APE            K +
Sbjct: 129 LAARNVLVSEDNV-AKVSDFGLTKE--ASSTQDTGKLPVKWTAPEALRE--------KKF 177

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           + K DV+SFGI+LWE+ +          L+       K  +   P+   P +  ++++CW
Sbjct: 178 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCW 237

Query: 125 VEDPNLRPSFSQIIRML 141
             D  +RPSF Q+   L
Sbjct: 238 HLDAAMRPSFLQLREQL 254

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 6e-31
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           +   N+LL       K++DFGL++    +E   +  T      +W APE  +        
Sbjct: 133 LAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY------- 184

Query: 61  KKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFI 119
              +++K DV+SFG+++WE  +  + P+ GM   +   A   K  R G P     ++  +
Sbjct: 185 -YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-VTAMLEKGERMGCPAGCPREMYDL 242

Query: 120 VQSCWVEDPNLRPSFSQIIRMLNAFLF 146
           +  CW  D   RP F+ +   L  + +
Sbjct: 243 MNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 6e-31
 Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE--ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +   N L+      +K++DFGL+R   +             RW  PE+            
Sbjct: 126 LAARNCLVNDQG-VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY--------S 176

Query: 63  HYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
            +++K D+++FG+++WE+ +  ++P+E  +N + A   A +  R   P   S  +  I+ 
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPHLASEKVYTIMY 235

Query: 122 SCWVEDPNLRPSFSQIIRML 141
           SCW E  + RP+F  ++  +
Sbjct: 236 SCWHEKADERPTFKILLSNI 255

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 2e-30
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +   N L+  + + +K++DFG+ R   +      T      +W +PE++S          
Sbjct: 127 LAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------S 177

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            Y++K DV+SFG+++WE+ +         +            R   P   S  +  I+  
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH 237

Query: 123 CWVEDPNLRPSFSQIIRML 141
           CW E P  RP+FS+++R L
Sbjct: 238 CWKERPEDRPAFSRLLRQL 256

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 2e-30
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 13/154 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D  S+KL DFG   + T  +   +   GT  WMAPE+ +         K 
Sbjct: 142 IKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--------KA 192

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQS 122
           Y  KVD++S GI+  E++    P+   + L+A Y  A         PE +S      +  
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 252

Query: 123 CWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
           C   D   R S  ++++  + FL   +P S   P
Sbjct: 253 CLDMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 3e-30
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           ++  N+L+  D  S K+ADFGLAR  E+             +W APE  +          
Sbjct: 135 LRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY--------G 185

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            +  K DV+SFGI+L E++T+                  +  R   P++   +L  +++ 
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL 245

Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW E P  RP+F  +  +L  F 
Sbjct: 246 CWKERPEDRPTFDYLRSVLEDFF 268

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 3e-30
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 14/142 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           +   NLLL      +K+ DFGL R     +    M       + W APE   T       
Sbjct: 137 LAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT------- 188

Query: 61  KKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFI 119
            + +++  D + FG+ LWE+ T  + P+ G++  Q  +    +  R   PED   D+  +
Sbjct: 189 -RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247

Query: 120 VQSCWVEDPNLRPSFSQIIRML 141
           +  CW   P  RP+F  +   L
Sbjct: 248 MVQCWAHKPEDRPTFVALRDFL 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 3e-30
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  N+L T D   +KLADFG++ + T T +   +  GT  WMAPE+    T +    + 
Sbjct: 136 LKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD---RP 191

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA-AAFKHARPGLPEDISPDLAFIVQS 122
           Y+ K DV+S GI L E+     P   ++ ++     A  +      P   S +    ++ 
Sbjct: 192 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 251

Query: 123 CWVEDPNLRPSFSQIIR 139
           C  ++ + R + SQ+++
Sbjct: 252 CLEKNVDARWTTSQLLQ 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 4e-30
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +   N+L+  +    K+ADFGL+R + V    T      RWMA E  +           Y
Sbjct: 153 LAARNILVGENYV-AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--------SVY 203

Query: 65  NNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
               DV+S+G++LWE+++    P+ GM      Y    +  R   P +   ++  +++ C
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 262

Query: 124 WVEDPNLRPSFSQIIRMLNAFL 145
           W E P  RPSF+QI+  LN  L
Sbjct: 263 WREKPYERPSFAQILVSLNRML 284

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  108 bits (271), Expect = 2e-29
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 14/143 (9%)

Query: 3   KFMKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           + +   N L+  +   +K+ADFGL+R        +    +    RWM PE          
Sbjct: 164 RDLATRNCLVGEN-MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY------ 216

Query: 60  EKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAF 118
               Y  + DV+++G+VLWE+ +    P+ GM++ +  Y           PE+   +L  
Sbjct: 217 --NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR-DGNILACPENCPLELYN 273

Query: 119 IVQSCWVEDPNLRPSFSQIIRML 141
           +++ CW + P  RPSF  I R+L
Sbjct: 274 LMRLCWSKLPADRPSFCSIHRIL 296

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (270), Expect = 2e-29
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR------EETVTEMMTAETGTYRWMAPELYSTVTLRQ 58
           +   N+L+  +    K++DFGL+R       +             RW APE         
Sbjct: 154 LAARNILVNSNLV-CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY----- 207

Query: 59  GEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLA 117
              + + +  DV+S+GIV+WE+++    P+  M+N Q    A  +  R   P D    L 
Sbjct: 208 ---RKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALH 263

Query: 118 FIVQSCWVEDPNLRPSFSQIIRMLNAFL 145
            ++  CW +D N RP F QI+  L+  +
Sbjct: 264 QLMLDCWQKDRNHRPKFGQIVNTLDKMI 291

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 2e-29
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +   N+L+T   K +K+ DFGLAR    ++   +        +WMAPE            
Sbjct: 190 LAARNVLVTHG-KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-------- 240

Query: 62  KHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
             Y  K DV+S+GI+LWE+ +    P+ G+      Y       +   P   + ++  I+
Sbjct: 241 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIM 300

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           QSCW  D   RPSF  +   L   L
Sbjct: 301 QSCWAFDSRKRPSFPNLTSFLGCQL 325

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 2e-29
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +   N+L++     +KL DFGL+R  E++     +      +WMAPE  +         +
Sbjct: 134 IAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF--------R 184

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            + +  DV+ FG+ +WE+L + +                   R  +P +  P L  ++  
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 244

Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  DP+ RP F+++   L+  L
Sbjct: 245 CWAYDPSRRPRFTELKAQLSTIL 267

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  106 bits (266), Expect = 5e-29
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 5/137 (3%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  D   +KL DFG + +    E +    GT  ++APE+             Y
Sbjct: 136 LKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC--SMNDNHPGY 192

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE--DISPDLAFIVQS 122
             +VD++S G++++ LL    PF     +         + + G PE  D S  +  +V  
Sbjct: 193 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252

Query: 123 CWVEDPNLRPSFSQIIR 139
             V  P  R +  + + 
Sbjct: 253 FLVVQPQKRYTAEEALA 269

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 6e-29
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +   N+L+    + +K+ DFGLA+    E             +WMA E            
Sbjct: 137 LAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH-------- 187

Query: 62  KHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           + Y ++ DV+S+G+ +WEL+T    P++G+       +   K  R   P   + D+  I+
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEKGERLPQPPICTIDVYMIM 246

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFLFTL-RPPSPSVPESDTNEAAATSN 168
             CW+ D + RP F ++I   +       R       E     +   SN
Sbjct: 247 VKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSN 295

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (261), Expect = 3e-28
 Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR--EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +   N L+  +   +K+ADFGL+R                 +W APE  +          
Sbjct: 141 LAARNCLVGEN-HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------N 191

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQS 122
            ++ K DV++FG++LWE+ T  +      +L   Y    K  R   PE     +  ++++
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 251

Query: 123 CWVEDPNLRPSFSQIIRMLNAFL 145
           CW  +P+ RPSF++I +      
Sbjct: 252 CWQWNPSDRPSFAEIHQAFETMF 274

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 8e-28
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 6   KEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           K +NLLL     +LK++DFGLA          ++    GT  ++APEL          ++
Sbjct: 130 KPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-------RE 181

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA-FKHARPGLPEDISPDLAFIVQ 121
            +   VDV+S GIVL  +L   LP++  S+    Y+    K       + I      ++ 
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 241

Query: 122 SCWVEDPNLRPSFSQIIR 139
              VE+P+ R +   I +
Sbjct: 242 KILVENPSARITIPDIKK 259

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 3e-27
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 16/132 (12%)

Query: 8   DNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNK 67
           +N+L+  ++  LKL DFG       T + T   GT  +  PE            +++   
Sbjct: 139 ENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRY-------HRYHGRS 190

Query: 68  VDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVED 127
             V+S GI+L++++   +PFE    +           +    + +S +   +++ C    
Sbjct: 191 AAVWSLGILLYDMVCGDIPFEHDEEI--------IRGQVFFRQRVSSECQHLIRWCLALR 242

Query: 128 PNLRPSFSQIIR 139
           P+ RP+F +I  
Sbjct: 243 PSDRPTFEEIQN 254

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 6e-27
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 28/163 (17%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR-----EETVTEMMTAETGTYRWMAPELYSTVTLRQG 59
           +K  N+L+  +  +  +AD GLA       +T+        GT R+MAPE+       + 
Sbjct: 134 LKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192

Query: 60  EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY---------------AAAFKHA 104
            +     + D+Y+ G+V WE+           + Q  Y                   +  
Sbjct: 193 FE--SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250

Query: 105 RPGLPE-----DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 142
           RP +P      +    +A I++ CW  +   R +  +I + L+
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =   99 bits (248), Expect = 3e-26
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +   N+LL+     +K+ DFGLAR   ++             +WMAPE            
Sbjct: 160 LAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-------- 210

Query: 62  KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           + Y  + DV+SFG++LWE+ +    P+ G+   +       +  R   P+  +P++   +
Sbjct: 211 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 270

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
             CW  +P+ RP+FS+++  L   L
Sbjct: 271 LDCWHGEPSQRPTFSELVEHLGNLL 295

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  100 bits (249), Expect = 5e-26
 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 11/138 (7%)

Query: 5   MKEDNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N++ T  + + LKL DFGL       + +   TGT  + APE+           K 
Sbjct: 150 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG--------KP 201

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA--AAFKHARPGLPEDISPDLAFIVQ 121
                D++S G++ + LL+   PF G ++ +      +   +        IS D    ++
Sbjct: 202 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 261

Query: 122 SCWVEDPNLRPSFSQIIR 139
              + DPN R +  Q + 
Sbjct: 262 KLLLADPNTRMTIHQALE 279

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (245), Expect = 8e-26
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 14/136 (10%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N+LL  D   +++ DFG A+    E+      +  GT ++++PEL +         
Sbjct: 134 LKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE-------- 184

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQ 121
           K      D+++ G ++++L+    PF   +                 PE   P    +V+
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPEKFFPKARDLVE 242

Query: 122 SCWVEDPNLRPSFSQI 137
              V D   R    ++
Sbjct: 243 KLLVLDATKRLGCEEM 258

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.0 bits (246), Expect = 1e-25
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 8   DNLLLTPDQKS-LKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNN 66
           +N++    + S +K+ +FG AR+    +          + APE++        +    + 
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH--------QHDVVST 182

Query: 67  KVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCW 124
             D++S G +++ LL+   PF   +N Q                 ++IS +    V    
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLL 242

Query: 125 VEDPNLRPSFSQIIR 139
           V++   R + S+ ++
Sbjct: 243 VKERKSRMTASEALQ 257

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.8 bits (243), Expect = 2e-25
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 9   NLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV 68
                 +   + ++DFGL++ E    +++   GT  ++APE+ +         K Y+  V
Sbjct: 139 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ--------KPYSKAV 190

Query: 69  DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP--EDISPDLAFIVQSCWVE 126
           D +S G++ + LL    PF   ++ +              P  +DIS      ++    +
Sbjct: 191 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 250

Query: 127 DPNLRPSFSQIIR 139
           DP  R +  Q ++
Sbjct: 251 DPEKRFTCEQALQ 263

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.3 bits (244), Expect = 2e-25
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 12/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K DN+LL  D    K+ADFG+ +E            GT  ++APE+           + 
Sbjct: 129 LKLDNILLDKDGHI-KIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG--------QK 179

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           YN+ VD +SFG++L+E+L  + PF G    +  +  + +   P  P  +  +   ++   
Sbjct: 180 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH--SIRMDNPFYPRWLEKEAKDLLVKL 237

Query: 124 WVEDPNLRPSFSQIIR 139
           +V +P  R      IR
Sbjct: 238 FVREPEKRLGVRGDIR 253

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 97.8 bits (243), Expect = 3e-25
 Identities = 27/138 (19%), Positives = 60/138 (43%), Gaps = 11/138 (7%)

Query: 5   MKEDNLLLTPDQK-SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +N++    +  S+K+ DFGLA +    E++   T T  + APE+         +++ 
Sbjct: 153 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV--------DREP 204

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQ 121
                D+++ G++ + LL+   PF G  +L+                   +SP+    ++
Sbjct: 205 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK 264

Query: 122 SCWVEDPNLRPSFSQIIR 139
           +   ++P  R +    + 
Sbjct: 265 NLLQKEPRKRLTVHDALE 282

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.8 bits (240), Expect = 4e-25
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 13/137 (9%)

Query: 8   DNLLLTPD---QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +N++L      +  +K+ DFGLA +           GT  ++APE+           +  
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--------NYEPL 193

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA--AAFKHARPGLPEDISPDLAFIVQS 122
             + D++S G++ + LL+   PF G +  +      A           + S      ++ 
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

Query: 123 CWVEDPNLRPSFSQIIR 139
             V+DP  R +    ++
Sbjct: 254 LLVKDPKKRMTIQDSLQ 270

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.9 bits (240), Expect = 5e-25
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +   N ++  D  ++K+ DFG+ R   E              RWM+PE            
Sbjct: 159 LAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-------- 209

Query: 62  KHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
             +    DV+SFG+VLWE+ T    P++G+SN Q       +      P++    L  ++
Sbjct: 210 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELM 268

Query: 121 QSCWVEDPNLRPSFSQIIRML 141
           + CW  +P +RPSF +II  +
Sbjct: 269 RMCWQYNPKMRPSFLEIISSI 289

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.5 bits (239), Expect = 6e-25
 Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 14/145 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +   N+L+T D    K+ADFGLAR        +  T      +WMAPE            
Sbjct: 161 LAARNVLVTEDNVM-KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-------- 211

Query: 62  KHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
           + Y ++ DV+SFG++LWE+ T    P+ G+  ++  +    +  R   P + + +L  ++
Sbjct: 212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMM 270

Query: 121 QSCWVEDPNLRPSFSQIIRMLNAFL 145
           + CW   P+ RP+F Q++  L+  +
Sbjct: 271 RDCWHAVPSQRPTFKQLVEDLDRIV 295

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 5e-24
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 52/177 (29%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+L+    + +KL DFG++ +  +  M  +  GT  +M+PE             HY
Sbjct: 131 VKPSNILVNSRGE-IKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQG--------THY 180

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSN-------------------------------- 92
           + + D++S G+ L E+   R P                                      
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240

Query: 93  ---------LQAAYAAAFKHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
                    +            P LP    S +    V  C +++P  R    Q++ 
Sbjct: 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 92.6 bits (229), Expect = 2e-23
 Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 26/163 (15%)

Query: 5   MKEDNLLLT----PDQKSLKLADFGLAR--------EETVTEMMTAETGTYRWMAPELYS 52
           +K DN L+      +   + + DFG+ +        +          +GT R+M+   + 
Sbjct: 127 IKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH- 185

Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA------AAFKHARP 106
                    +  + + D+ + G V    L   LP++G+                      
Sbjct: 186 -------LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR 238

Query: 107 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR 149
            L      +    +        +  P +  +  + +  L  L 
Sbjct: 239 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 281

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 90.9 bits (225), Expect = 9e-23
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +N+LL  +   +K+ DFG A+   V ++     GT  ++APE+ ST        K Y
Sbjct: 130 LKPENILLDKN-GHIKITDFGFAKY--VPDVTYTLCGTPDYIAPEVVST--------KPY 178

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           N  +D +SFGI+++E+L    PF   + ++        +A    P   + D+  ++    
Sbjct: 179 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE--KILNAELRFPPFFNEDVKDLLSRLI 236

Query: 125 VEDPNLRPSFSQ 136
             D + R    Q
Sbjct: 237 TRDLSQRLGNLQ 248

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.6 bits (224), Expect = 1e-22
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +   N+LLT  + + K+ DFGLAR    ++   +        +WMAPE            
Sbjct: 171 LAARNILLTHGRIT-KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-------- 221

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLP-FEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIV 120
             Y  + DV+S+GI LWEL +     + GM      Y    +  R   PE    ++  I+
Sbjct: 222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIM 281

Query: 121 QSCWVEDPNLRPSFSQIIRML 141
           ++CW  DP  RP+F QI++++
Sbjct: 282 KTCWDADPLKRPTFKQIVQLI 302

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 2e-22
 Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 17/200 (8%)

Query: 5   MKEDNLLLT--PDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +NLL T       LKL DFG A+E T    +T    T  ++APE+           +
Sbjct: 137 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG--------PE 188

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA--AAFKHARPGLPE----DISPDL 116
            Y+   D++S G++++ LL    PF     L  +       +  +   P     ++S ++
Sbjct: 189 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 248

Query: 117 AFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAATSNGAMTEFSA 176
             ++++    +P  R + ++ +      + + + P   +  S   +        + E   
Sbjct: 249 KMLIRNLLKTEPTQRMTITEFMNH-PWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMT 307

Query: 177 RARGKFAFLRQLFTAKRTKN 196
            A        +    K+ ++
Sbjct: 308 SALATMRVDYEQIKIKKIED 327

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 7e-22
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 12/130 (9%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE-ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +NL+L  D   +K+ DFGL +E  +    M    GT  ++APE+             
Sbjct: 131 IKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--------ND 181

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           Y   VD +  G+V++E++  RLPF    + +              P  +SP+   ++   
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTLSPEAKSLLAGL 239

Query: 124 WVEDPNLRPS 133
             +DP  R  
Sbjct: 240 LKKDPKQRLG 249

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 87.1 bits (215), Expect = 3e-21
 Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 21/172 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+LL  +   ++++D GLA +    +   A  GT+ +MAPE+             Y
Sbjct: 133 LKPANILLD-EHGHVRISDLGLACD-FSKKKPHASVGTHGYMAPEVLQK-------GVAY 183

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARPGLPEDISPDLAFIVQSC 123
           ++  D +S G +L++LL    PF       +             LP+  SP+L  +++  
Sbjct: 184 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 243

Query: 124 WVEDPNLRPSFSQI----------IRMLN-AFLFTLRPPSPSVPESDTNEAA 164
              D N R                 R L+   +F  + P P +P      AA
Sbjct: 244 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAA 295

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.6 bits (211), Expect = 5e-21
 Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 13/140 (9%)

Query: 5   MKEDNLLLTPDQK---SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K  N++++               +A          A  GT ++++PE            
Sbjct: 137 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-------- 188

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFI 119
              + + DVYS G VL+E+LT   PF G S +  AY    +   P     E +S DL  +
Sbjct: 189 DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAV 248

Query: 120 VQSCWVEDPNLRPSFSQIIR 139
           V     ++P  R   +  +R
Sbjct: 249 VLKALAKNPENRYQTAAEMR 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.9 bits (209), Expect = 1e-20
 Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 24/162 (14%)

Query: 3   KFMKEDNLLLTPDQKSLKL--ADFGLAR--------EETVTEMMTAETGTYRWMAPELYS 52
           + +K DN L+   +K   +   DFGLA+        +          TGT R+ +   + 
Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL 186

Query: 53  TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR------P 106
                       + + D+ S G VL       LP++G+              +       
Sbjct: 187 G--------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 238

Query: 107 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 148
            L +    + A  +  C     + +P +S + ++        
Sbjct: 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 5e-20
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLARE--ETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           +K +N+LL  +   + L DFGL++E     TE      GT  +MAP++       +G   
Sbjct: 155 IKLENILLDSNGH-VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV------RGGDS 207

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMS--NLQAAYAAAFKHARPGLPEDISPDLAFIV 120
            ++  VD +S G++++ELLT   PF      N QA  +     + P  P+++S     ++
Sbjct: 208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLI 267

Query: 121 QSCWVEDPNLRPSFSQ 136
           Q   ++DP  R     
Sbjct: 268 QRLLMKDPKKRLGCGP 283

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 2e-19
 Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 37/177 (20%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K +NLLL  +   LKLADFGLA+         T +  T  + APEL           + 
Sbjct: 126 LKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG-------ARM 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE------------- 110
           Y   VD+++ G +L ELL       G S+L            P   +             
Sbjct: 178 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237

Query: 111 -------------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPS 154
                            DL  ++Q  ++ +P  R + +Q ++M   +      P+P 
Sbjct: 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM--KYFSNRPGPTPG 292

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.1 bits (199), Expect = 4e-19
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 34/160 (21%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+L+T     +KLADFGLAR  +    +T+   T  + APE+             Y
Sbjct: 142 LKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--------SSY 192

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG----------------- 107
              VD++S G +  E+   +  F G S++            PG                 
Sbjct: 193 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS 252

Query: 108 --------LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
                      DI      ++  C   +P  R S    + 
Sbjct: 253 KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 3e-18
 Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 38/179 (21%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+  +  ++KLADFGLAR   V     T E  T  + APE+           K+
Sbjct: 128 LKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL-------GCKY 179

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA----------------AAFKHARPG 107
           Y+  VD++S G +  E++T R  F G S +   +                  +    +P 
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239

Query: 108 LPE-----------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSV 155
            P+            +  D   ++      DPN R S    +     F   +  P P +
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH--PFFQDVTKPVPHL 296

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 1e-17
 Identities = 41/179 (22%), Positives = 62/179 (34%), Gaps = 36/179 (20%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NLLL PD   LKL DFG A++    E   +   +  + APEL             Y
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-------GATDY 200

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA---------------AAFKHARPGLP 109
            + +DV+S G VL ELL  +  F G S +                        +     P
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFP 260

Query: 110 E------------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 156
           +               P+   +        P  R +  +     ++F   LR P+  +P
Sbjct: 261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA--HSFFDELRDPNVKLP 317

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 2e-17
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 45/181 (24%)

Query: 8   DNLLLTPDQKSLKLADFGLAR-----EETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
            N+L+T D   LKLADFGLAR     + +     T    T  +  PEL          ++
Sbjct: 146 ANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG-------ER 197

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA-------------------------AY 97
            Y   +D++  G ++ E+ T     +G +                               
Sbjct: 198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257

Query: 98  AAAFKHARPGLPEDI-----SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS 152
               K  +  + + +      P    ++    V DP  R      +   + F ++   PS
Sbjct: 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWSDPMPS 315

Query: 153 P 153
            
Sbjct: 316 D 316

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 75.6 bits (185), Expect = 4e-17
 Identities = 23/173 (13%), Positives = 52/173 (30%), Gaps = 43/173 (24%)

Query: 3   KFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKK 62
           + +K  N+++  + + L+L D+GLA      +       +  +  PEL         + +
Sbjct: 153 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV-------DYQ 205

Query: 63  HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-------------------- 102
            Y+  +D++S G +L  ++  + PF    +         K                    
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265

Query: 103 ----------------HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
                                    +SP+    +      D   R +  + + 
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.1 bits (181), Expect = 2e-16
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 18/140 (12%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K +NLL+      +++ DFG A+            GT   +APE+  +        K Y
Sbjct: 167 LKPENLLIDQQ-GYIQVTDFGFAKRVK--GRTWTLCGTPEALAPEIILS--------KGY 215

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
           N  VD ++ G++++E+     PF     +Q          +   P   S DL  ++++  
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGKVRFPSHFSSDLKDLLRNLL 273

Query: 125 VEDP-----NLRPSFSQIIR 139
             D      NL+   + I  
Sbjct: 274 QVDLTKRFGNLKNGVNDIKN 293

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (176), Expect = 4e-16
 Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 39/176 (22%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKH 63
           +K  NLL+  + +  KLA+FGLAR   +     +AE  T  +  P++           K 
Sbjct: 127 LKPQNLLINRNGEL-KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-------AKL 178

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--------------------- 102
           Y+  +D++S G +  EL     P    +++       F+                     
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238

Query: 103 -------HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 151
                   +   +   ++     ++Q+    +P  R S  + ++  + +     PP
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ--HPYFSDFCPP 292

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 71.8 bits (175), Expect = 6e-16
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 36/163 (22%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRW-MAPELYSTVTLRQGEKKH 63
           +K  NLL+  +   LK+ADFGLAR   +            W  AP++           K 
Sbjct: 126 LKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM-------GSKK 177

Query: 64  YNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ-----------------------AAYAAA 100
           Y+  +D++S G +  E++     F G+S                            Y   
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237

Query: 101 FKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
           F    P       + +      ++      DPN R +  Q + 
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 2e-15
 Identities = 37/168 (22%), Positives = 55/168 (32%), Gaps = 41/168 (24%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR----EETVTEMMTAETGTYRWMAPELYSTVTLRQGE 60
           +K  NLLL      LK+ DFGLAR    +   T  +T    T  + APE+          
Sbjct: 135 LKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN------- 186

Query: 61  KKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG------------- 107
            K Y   +D++S G +L E+L+NR  F G   L            P              
Sbjct: 187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 246

Query: 108 ----------------LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 139
                           L  +       ++      +P+ R    Q + 
Sbjct: 247 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 7e-13
 Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 43/188 (22%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL +  D +  K+ DFGLAR+      MT    T  + APE+             Y
Sbjct: 147 LKPGNLAVNEDCEL-KILDFGLARQ--ADSEMTGYVVTRWYRAPEVIL-------NWMRY 196

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY------------------AAAFKHARP 106
              VD++S G ++ E++T +  F+G  +L                      +   K+   
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256

Query: 107 GLPE-----------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS--P 153
           GLPE           + SP    +++   V D   R +  + +     +  +L      P
Sbjct: 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH--PYFESLHDTEDEP 314

Query: 154 SVPESDTN 161
            V + D +
Sbjct: 315 QVQKYDDS 322

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 41/178 (23%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  NL    +   LK+ DFGLAR     + MT    T  + APE+            HY
Sbjct: 147 LKPSNLA-VNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIML-------NWMHY 196

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY---------------------AAAFKH 103
           N  VD++S G ++ ELLT R  F G  ++                         A  +  
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256

Query: 104 ARPGLPE--------DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSP 153
           +   +P+          +P    +++   V D + R + +Q +   +A+      P  
Sbjct: 257 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA--HAYFAQYHDPDD 312

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 4e-10
 Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHY 64
           +K  N+++  D    K+ DFGLAR    + MMT    T  + APE+             Y
Sbjct: 145 LKPSNIVVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--------GMGY 195

Query: 65  NNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCW 124
              VD++S G ++ E++ +++ F G   +   +    +      PE +      +     
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254

Query: 125 VEDPNLRPSFSQIIR 139
                   +F ++  
Sbjct: 255 NRPKYAGLTFPKLFP 269

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.3 bits (124), Expect = 6e-09
 Identities = 23/184 (12%), Positives = 49/184 (26%), Gaps = 57/184 (30%)

Query: 5   MKEDNLLLTPDQKSLKLADFGLAR---EETVTEMMTAETGTYRWMAPELYSTVTLRQGEK 61
           +K +N+L+        L    +A         E  T    T  + +PE+           
Sbjct: 152 IKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG-------- 203

Query: 62  KHYNNKVDVYSFGIVLWELLTNRLPFEG-------------------------------- 89
             +    D++S   +++EL+T    FE                                 
Sbjct: 204 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 263

Query: 90  --------------MSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS 135
                         +S L+          +    +D + +++  +      DP  R    
Sbjct: 264 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323

Query: 136 QIIR 139
            ++ 
Sbjct: 324 GLVN 327

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.98
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.98
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.97
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.95
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.93
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.57
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.68
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.28
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.11
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	92.65
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	92.37
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	81.89

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-36  Score=224.79  Aligned_cols=141  Identities=27%  Similarity=0.499  Sum_probs=109.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.....   .......||+.|+|||++.+.     ....|+.++|||||||++
T Consensus       126 vHrDlKp~NiLl~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~-----~~~~~~~~sDiwS~Gv~l  199 (276)
T d1uwha_         126 IHRDLKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ-----DKNPYSFQSDVYAFGIVL  199 (276)
T ss_dssp             CCSCCCGGGEEEETT-SSEEECCCCCSCC------------CCCCGGGCCHHHHTTC-----SSCCCCHHHHHHHHHHHH
T ss_pred             eccccCHHHEEEcCC-CCEEEccccceeeccccCCcccccccccCcccCCHHHHhcc-----cCCCCCchhhhhhhHHHH
Confidence            799999999999976 78999999999754322   223456899999999998531     124578999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCC----CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARP----GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||++|+.||.+.................    ..+..+++++.+|+.+||..||.+|||+.+++++|+.+...
T Consensus       200 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            99999999999877655544443333222    34567899999999999999999999999999999877654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-36  Score=227.27  Aligned_cols=138  Identities=28%  Similarity=0.548  Sum_probs=109.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.....   .......||+.|+|||++.+        ..++.++|||||||++
T Consensus       156 vHrDlKp~NILl~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~--------~~~~~~sDiwS~Gvil  226 (299)
T d1ywna1         156 IHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--------RVYTIQSDVWSFGVLL  226 (299)
T ss_dssp             CCSCCCGGGEEECGG-GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             cCCcCCccceeECCC-CcEEEccCcchhhccccccccccCceeeCccccchhHhhc--------CCCCcccceeehHHHH
Confidence            799999999999966 68999999999854322   12334679999999999854        6789999999999999


Q ss_pred             HHHHcC-CCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||++| .+||.+................+..|..+++++.+++.+||..||.+|||+.+++++|+.++..
T Consensus       227 ~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         227 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            999986 5678776655555555566677888889999999999999999999999999999999988653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-36  Score=221.82  Aligned_cols=133  Identities=23%  Similarity=0.457  Sum_probs=110.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...... ....+||+.|+|||++.+        ..++.++||||+||++|||
T Consensus       128 vHrDiKp~Nill~~~-~~~kl~DFG~a~~~~~~~-~~~~~Gt~~Y~APE~~~~--------~~~~~~~DiwSlGvilyel  197 (263)
T d2j4za1         128 IHRDIKPENLLLGSA-GELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEG--------RMHDEKVDLWSLGVLCYEF  197 (263)
T ss_dssp             CCCCCCGGGEEECTT-SCEEECCCCSCSCCCCCC-CEETTEEGGGCCHHHHTT--------CCCCTTHHHHHHHHHHHHH
T ss_pred             eeeeeccccceecCC-CCEeecccceeeecCCCc-ccccCCCCcccCHHHHcC--------CCCCchhhhhhHhHHHHHH
Confidence            799999999999976 679999999997654332 345689999999999864        5689999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|+.||.+.......  .......+.+|..+++++.+|+.+||..||.+|||++|+++  |.|+..
T Consensus       198 l~G~~Pf~~~~~~~~~--~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~--hp~~~~  260 (263)
T d2j4za1         198 LVGKPPFEANTYQETY--KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITA  260 (263)
T ss_dssp             HHSSCTTCCSSHHHHH--HHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT--CHHHHH
T ss_pred             hcCCCCCCCCCHHHHH--HHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc--CcCcCC
Confidence            9999999876643322  22334556778889999999999999999999999999998  666643

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=222.24  Aligned_cols=138  Identities=28%  Similarity=0.410  Sum_probs=113.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++......  ......||+.|+|||++..        ..++.++|||||||++|
T Consensus       131 vHrDiKp~NIll~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~~~~sDvwS~Gvvl~  201 (272)
T d1qpca_         131 IHRDLRAANILVSDT-LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY--------GTFTIKSDVWSFGILLT  201 (272)
T ss_dssp             ECSCCSGGGEEECTT-SCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH--------CEECHHHHHHHHHHHHH
T ss_pred             ccCccchhheeeecc-cceeeccccceEEccCCccccccccCCcccccChHHHhC--------CCCCchhhhhhhHHHHH
Confidence            699999999999976 789999999998654322  2334578999999999853        56889999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ||++|..|+.................++..|..+++++.+|+.+||..||.+|||++++++.|++++..
T Consensus       202 ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            999966555444444555555566677778889999999999999999999999999999999998754

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-35  Score=220.87  Aligned_cols=137  Identities=26%  Similarity=0.443  Sum_probs=107.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......||+.|+|||++.+        ..++.++|||||||+
T Consensus       132 iHrDlKp~NILl~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--------~~~~~~sDI~S~Gvi  202 (283)
T d1mqba_         132 VHRDLAARNILVNSN-LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY--------RKFTSASDVWSFGIV  202 (283)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECCCCC-----------------CCCGGGSCHHHHHS--------CCCCHHHHHHHHHHH
T ss_pred             ccCccccceEEECCC-CeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHcc--------CCCCCcccccccHHH
Confidence            799999999999977 789999999998543321    1223468999999998853        678999999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +|||+++..|+.................+++.|..++.++.+|+.+||..||.+||++.++++.|+.+..
T Consensus       203 l~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         203 MWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            9999997666555455555556666677778888899999999999999999999999999999988765

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-36  Score=229.71  Aligned_cols=133  Identities=31%  Similarity=0.546  Sum_probs=112.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+|+......   ...+..||+.|+|||++.+        ..++.++|||||||++
T Consensus       186 iHRDlKp~Nill~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~~~DiwS~Gvil  256 (325)
T d1rjba_         186 VHRDLAARNVLVTHG-KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE--------GIYTIKSDVWSYGILL  256 (325)
T ss_dssp             EETTCSGGGEEEETT-TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             eeccCchhccccccC-CeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC--------CCCCcceeccchhHHH
Confidence            699999999999977 789999999998543322   2234567999999999853        6789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      |||++ |..||.+...............+++.|..+++++.+|+.+||+.||++|||++||+++|.
T Consensus       257 ~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         257 WEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            99997 899998876555555555566677888899999999999999999999999999999885

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=221.64  Aligned_cols=133  Identities=29%  Similarity=0.559  Sum_probs=107.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+.+.+||+|||+++..... .....+||+.|+|||++.         +.++.++||||+||++|||
T Consensus       136 iHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~-~~~~~~GT~~Y~aPE~~~---------~~~~~~~DIwSlGvilyel  205 (270)
T d1t4ha_         136 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFMAPEMYE---------EKYDESVDVYAFGMCMLEM  205 (270)
T ss_dssp             CCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-SBEESCSSCCCCCGGGGG---------TCCCTHHHHHHHHHHHHHH
T ss_pred             EeCCcChhhceeeCCCCCEEEeecCcceeccCC-ccCCcccCccccCHHHhC---------CCCCCcCchhhHHHHHHHH
Confidence            799999999999754468999999999754332 234568999999999874         3589999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCC-CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|+.||.+................+ .++...++++.+|+.+||..||.+|||++|+++  |.|+
T Consensus       206 ~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~--Hp~f  269 (270)
T d1t4ha_         206 ATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN--HAFF  269 (270)
T ss_dssp             HHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGG
T ss_pred             HHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC--Cccc
Confidence            99999998776655554444433332 345668899999999999999999999999998  5443

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-36  Score=223.67  Aligned_cols=129  Identities=29%  Similarity=0.401  Sum_probs=99.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... ......+||+.|+|||++.+        ..|+.++|||||||++||
T Consensus       136 iHrDiKp~NIll~~~-~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~--------~~~~~~~DIwSlGvilye  206 (269)
T d2java1         136 LHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR--------MSYNEKSDIWSLGCLLYE  206 (269)
T ss_dssp             ----CCGGGEEECTT-SCEEECCHHHHHHC-----------CCCSCCCHHHHTT--------CCCCHHHHHHHHHHHHHH
T ss_pred             EeCcCchhhcCcCCC-CcEEEeeccceeecccCCCccccCCCCcccCCHHHHcC--------CCCChHHHHHhhCHHHHH
Confidence            799999999999977 68999999999865432 23345789999999999853        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |++|+.||.+..... ............+|..+++++.+|+.+||..||.+|||++|+++
T Consensus       207 l~tg~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         207 LCALMPPFTAFSQKE-LAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHSSCSCCCSSHHH-HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhhCCCCCCCCCHHH-HHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            999999998866543 33333444555678889999999999999999999999999987

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-35  Score=218.66  Aligned_cols=136  Identities=27%  Similarity=0.541  Sum_probs=102.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .....||+.|+|||++.+        ..|+.++|||||||++|
T Consensus       123 iHrDlKp~Nill~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~k~DVwS~Gvil~  193 (263)
T d1sm2a_         123 IHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--------SRYSSKSDVWSFGVLMW  193 (263)
T ss_dssp             CCTTCSGGGEEECGG-GCEEECSCC------------------CTTSCCHHHHTT--------CCCCHHHHHHHHHHHHH
T ss_pred             eecccchhheeecCC-CCeEecccchheeccCCCceeecceecCcccCChHHhcC--------CCCCchhhhcchHHHHH
Confidence            799999999999976 6899999999985443222  223578999999999853        57899999999999999


Q ss_pred             HHHcC-CCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           79 ELLTN-RLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        79 e~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ||+++ .+||... .............++..|..+++++.+++.+||..||.+|||+++++++|+.+..
T Consensus       194 el~t~~~~~~~~~-~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         194 EVFSEGKIPYENR-SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHTTSCCTTCSC-CHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCCC-CHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            99995 5555544 4444444555566677788899999999999999999999999999999998764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-35  Score=222.38  Aligned_cols=136  Identities=32%  Similarity=0.483  Sum_probs=111.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..|+.++||||+||++|+
T Consensus       138 iHrDiKp~NILl~~~-~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~DiwSlGvilye  208 (293)
T d1yhwa1         138 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--------KAYGPKVDIWSLGIMAIE  208 (293)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSS--------SCBCTHHHHHHHHHHHHH
T ss_pred             cccCCcHHHeEECCC-CcEeeccchhheeeccccccccccccCCCccChhhhcC--------CCCCchhceehHhHHHHH
Confidence            699999999999976 6899999999986433 233455689999999999853        568999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHcc-CCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKH-ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++|..||.+.............. .....+..+++++.+|+.+||..||.+|||+.|+++  |.|+..
T Consensus       209 mltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~--Hp~~~~  275 (293)
T d1yhwa1         209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ--HQFLKI  275 (293)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT--CGGGGG
T ss_pred             HhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc--CHhhCC
Confidence            999999998877655544433332 233456778999999999999999999999999998  777653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.4e-35  Score=222.30  Aligned_cols=136  Identities=29%  Similarity=0.455  Sum_probs=110.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....   ...+||+.|+|||++.+.     ....|+.++|||||||++|||
T Consensus       137 iHrDiKp~NILl~~~-~~~Kl~DFG~a~~~~~~---~~~~GT~~Y~APE~~~~~-----~~~~y~~~~DiwSlGvilyel  207 (309)
T d1u5ra_         137 IHRDVKAGNILLSEP-GLVKLGDFGSASIMAPA---NSFVGTPYWMAPEVILAM-----DEGQYDGKVDVWSLGITCIEL  207 (309)
T ss_dssp             BCCCCSGGGEEEETT-TEEEECCCTTCBSSSSB---CCCCSCGGGCCHHHHTTT-----TSCCBCTHHHHHHHHHHHHHH
T ss_pred             eccCCCcceEEECCC-CCEEEeecccccccCCC---CccccCccccCHHHHhcc-----CCCCcCchhhhhhHHHHHHHH
Confidence            699999999999976 78999999999864432   356899999999998531     134688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|..||.+...............+...+..+++++.+|+.+||..||.+|||++++++  |.|+..
T Consensus       208 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~--Hp~~~~  272 (309)
T d1u5ra_         208 AERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK--HRFVLR  272 (309)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT--CHHHHS
T ss_pred             HHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh--CHHhcC
Confidence            99999998877655544444433334445568999999999999999999999999999  677654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-34  Score=219.78  Aligned_cols=136  Identities=29%  Similarity=0.525  Sum_probs=104.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccc------cCCCCccceecccccccccccccccCCCCchhhHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMM------TAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFG   74 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G   74 (198)
                      |||||||+|||++.+ +.+||+|||+++........      ....||+.|+|||.+..        ..++.++||||||
T Consensus       150 iHrDlKp~NILl~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~sDvwS~G  220 (299)
T d1jpaa_         150 VHRDLAARNILVNSN-LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY--------RKFTSASDVWSYG  220 (299)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECCC-----------------------CGGGSCHHHHHS--------CCCCHHHHHHHHH
T ss_pred             ccCccccceEEECCC-CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhc--------CCCCcccccccch
Confidence            799999999999976 78999999999854332211      12357899999999853        6789999999999


Q ss_pred             HHHHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           75 IVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        75 ~~l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++|||++ |..||.+..... .........+++.|..++.++.+|+.+||+.||.+|||+.++++.|+.++.
T Consensus       221 vvl~el~t~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         221 IVMWEVMSYGERPYWDMTNQD-VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            99999998 899998876543 334445566677788899999999999999999999999999999998765

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.9e-35  Score=219.74  Aligned_cols=136  Identities=27%  Similarity=0.480  Sum_probs=112.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .....|++.|+|||++.+        ..|+.++|||||||++|
T Consensus       137 iHrDlKp~NILl~~~-~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~k~DiwS~Gv~l~  207 (287)
T d1opja_         137 IHRDLAARNCLVGEN-HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--------NKFSIKSDVWAFGVLLW  207 (287)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHH--------CCCSHHHHHHHHHHHHH
T ss_pred             ccCccccCeEEECCC-CcEEEccccceeecCCCCceeeccccccccccChHHHcC--------CCCCchhhhhhHHHHHH
Confidence            799999999999976 6899999999986543222  223357889999999854        67899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ||++|..||..................+..|..+++++.+|+.+||..||.+|||++++++.|+.+.
T Consensus       208 ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         208 EIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            9999777665555555555555566777888899999999999999999999999999999888763

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=217.19  Aligned_cols=136  Identities=27%  Similarity=0.541  Sum_probs=111.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......||+.|+|||++..        ..++.++|||||||+
T Consensus       129 iHrDlKp~Nill~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~--------~~~~~~sDiwS~Gv~  199 (277)
T d1xbba_         129 VHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY--------YKFSSKSDVWSFGVL  199 (277)
T ss_dssp             ECSCCSGGGEEEEET-TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             ccCCCcchhhccccc-CcccccchhhhhhccccccccccccccCCCceecCchhhcC--------CCCCchhhhccchhh
Confidence            699999999999976 789999999998543221    1223568999999999854        567899999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      +|||++ |..||.+.... ..........+++.|..+++++.+|+.+||..||.+|||++++++.|+.+..
T Consensus       200 l~ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         200 MWEAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             hhHHhhCCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            999997 89999887654 3334445566778888999999999999999999999999999999987653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-34  Score=217.22  Aligned_cols=138  Identities=25%  Similarity=0.531  Sum_probs=113.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......||+.|+|||++..        ..++.++|||||||+
T Consensus       131 iHrDlKp~Nill~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDVwS~Gv~  201 (285)
T d1u59a_         131 VHRDLAARNVLLVNR-HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF--------RKFSSRSDVWSYGVT  201 (285)
T ss_dssp             ECCCCSGGGEEEEET-TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHH--------CEECHHHHHHHHHHH
T ss_pred             ecCcCchhheeeccC-CceeeccchhhhcccccccccccccccccCccccChHHHhC--------CCCCccchhhcchHH
Confidence            699999999999976 789999999998543221    1234568999999999854        568999999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      +|||++ |..||.+..... .........+++.|..+++++.+|+.+||..||.+||++.++++.|+......
T Consensus       202 l~E~lt~G~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         202 MWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             HHHHHTTSCCTTTTCCTHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            999998 899998876543 33444556677888999999999999999999999999999999998765543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-34  Score=218.95  Aligned_cols=134  Identities=28%  Similarity=0.526  Sum_probs=109.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc---ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT---EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.....   ....+..|++.|+|||.+.+        ..|+.++|||||||++
T Consensus       162 vHrDlKp~NILld~~-~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~t~ksDVwS~Gvvl  232 (301)
T d1lufa_         162 VHRDLATRNCLVGEN-MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY--------NRYTTESDVWAYGVVL  232 (301)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             EeeEEcccceEECCC-CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc--------CCCChhhhhccchhhH
Confidence            799999999999976 68999999999743222   12234678899999999864        6789999999999999


Q ss_pred             HHHHcCC-CCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLTNR-LPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |||++|. +||.+.... ...........+..|..+++++.+|+.+||..||++||||.+|++.|+.+
T Consensus       233 ~ell~~~~~p~~~~~~~-e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         233 WEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             HHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHccCCCCCCCCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            9999986 577766544 34445556667778889999999999999999999999999999999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-35  Score=217.70  Aligned_cols=136  Identities=27%  Similarity=0.410  Sum_probs=104.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+|+....   .......+||+.|+|||++.+       ...++.++||||+||++
T Consensus       125 iHrDiKp~NILl~~~-~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-------~~~~~~~~DiwSlGvil  196 (271)
T d1nvra_         125 THRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-------REFHAEPVDVWSCGIVL  196 (271)
T ss_dssp             ECSCCCGGGEEECTT-CCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHC-------SSBCHHHHHHHHHHHHH
T ss_pred             ccCcccHHHEEECCC-CCEEEccchhheeeccCCccccccceeeCcCccCHhHhcC-------CCCCCCceeeeHhHHHH
Confidence            699999999999976 6799999999985432   222445789999999999853       22346789999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCC-CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |||++|+.||.................. ...+..+++++.+|+.+||..||.+|||++|+++  |.|+.
T Consensus       197 yeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~--hpwf~  264 (271)
T d1nvra_         197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK--DRWYN  264 (271)
T ss_dssp             HHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CTTTT
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc--CHhhC
Confidence            9999999999765543333333322222 2223568999999999999999999999999988  66653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-34  Score=219.31  Aligned_cols=137  Identities=23%  Similarity=0.367  Sum_probs=96.9

Q ss_pred             CCCCCCCCCeEEcC--CCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTP--DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~--~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||+..  +++.+||+|||+++.........+.+||+.|+|||++.+        ..|+.++||||+||++|
T Consensus       129 iHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~--------~~~~~~~DiwSlGvily  200 (307)
T d1a06a_         129 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ--------KPYSKAVDCWSIGVIAY  200 (307)
T ss_dssp             CCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTT--------CCCCTHHHHHHHHHHHH
T ss_pred             eeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcC--------CCCCcHHHhhhhhHHHH
Confidence            79999999999953  236799999999986655555566789999999999853        56899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ||++|..||.+.................  +.+..+++++.+|+.+||..||.+|||++|+++  |.|+..
T Consensus       201 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~--hp~~~~  269 (307)
T d1a06a_         201 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ--HPWIAG  269 (307)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH--STTTTS
T ss_pred             HHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc--CHhhCC
Confidence            9999999998876544333333222222  334678999999999999999999999999999  666643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-34  Score=220.07  Aligned_cols=135  Identities=26%  Similarity=0.464  Sum_probs=102.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+|+..... ...+.+||+.|+|||++.+        ..|+.++||||+||++|||
T Consensus       127 iHRDiKP~NILl~~~-~~vkl~DFGla~~~~~~-~~~~~~GT~~Y~APEvl~~--------~~y~~~~DiWSlGvil~el  196 (322)
T d1s9ja_         127 MHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG--------THYSVQSDIWSMGLSLVEM  196 (322)
T ss_dssp             CCSCCSGGGEEECTT-CCEEECCCCCCHHHHHH-TC---CCSSCCCCHHHHHC--------SCCCTTHHHHHHHHHHHHH
T ss_pred             EccccCHHHeeECCC-CCEEEeeCCCccccCCC-ccccccCCccccCchHHcC--------CCCCcHHHHHHHHHHHHHH
Confidence            799999999999976 68999999999854332 2345789999999999864        5789999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHH-----------------------------------------HHHHccCCCCCCC-CCcHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAY-----------------------------------------AAAFKHARPGLPE-DISPDLAF  118 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~p~-~~~~~~~~  118 (198)
                      ++|+.||.+........                                         ........+..+. .++.++.+
T Consensus       197 l~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  276 (322)
T d1s9ja_         197 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQD  276 (322)
T ss_dssp             HHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHH
T ss_pred             HHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHH
Confidence            99999997654321110                                         0111112222222 36789999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154          119 IVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       119 l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |+.+||..||.+|||++|+++  |.|+..
T Consensus       277 li~~~L~~dP~~R~ta~e~L~--Hpf~~~  303 (322)
T d1s9ja_         277 FVNKCLIKNPAERADLKQLMV--HAFIKR  303 (322)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHT--SHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHhh--CHhhCc
Confidence            999999999999999999999  677654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-34  Score=214.36  Aligned_cols=140  Identities=26%  Similarity=0.370  Sum_probs=109.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++......  ......||+.|+|||++..        ..++.++|||||||++|
T Consensus       135 vH~DlKp~NIll~~~-~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDI~S~Giil~  205 (285)
T d1fmka3         135 VHRDLRAANILVGEN-LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--------GRFTIKSDVWSFGILLT  205 (285)
T ss_dssp             CCSCCSGGGEEECGG-GCEEECCCCTTC--------------CCGGGSCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             ecccccceEEEECCC-CcEEEcccchhhhccCCCceeeccccccccccChHHHhC--------CCCCcHHhhhcchHHHH
Confidence            799999999999976 689999999998543322  2233578999999999853        67899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           79 ELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ||++|..|+..................++.+..+++++.+++.+||+.||++||++++|+++|+.++....
T Consensus       206 el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         206 ELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             HHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            99997666554454454455555566677888999999999999999999999999999999999876554

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=217.81  Aligned_cols=128  Identities=21%  Similarity=0.365  Sum_probs=103.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc---cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV---TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++....   .......+||+.|+|||++.+        ..|+.++||||+||++
T Consensus       130 iHrDiKp~NIll~~~-~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--------~~~~~~~DiwSlGvil  200 (288)
T d1uu3a_         130 IHRDLKPENILLNED-MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE--------KSACKSSDLWALGCII  200 (288)
T ss_dssp             ECSCCSGGGEEECTT-SCEEECCCTTCEECC----------CCCCGGGCCHHHHHT--------CCCCHHHHHHHHHHHH
T ss_pred             EcCcCCccccccCCC-ceEEecccccceecccCCcccccccccCCccccCceeecc--------CCCCcccceehhhHHH
Confidence            699999999999976 6799999999985432   222345689999999999854        6789999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHH
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR  139 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~  139 (198)
                      |||++|..||.+....... .. .....+.+|..+++++.+|+.+||+.||.+|||++|+++
T Consensus       201 yell~g~~Pf~~~~~~~~~-~~-i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         201 YQLVAGLPPFRAGNEYLIF-QK-IIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHSSCSSCCSSHHHHH-HH-HHTTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHHhhCCCCCCCcCHHHHH-HH-HHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            9999999999886644332 22 234456778889999999999999999999999999755

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-34  Score=213.43  Aligned_cols=137  Identities=28%  Similarity=0.575  Sum_probs=104.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc--cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE--MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+||+++.+ +.+||+|||+++......  ......||+.|+|||++..        ..++.++|||||||++|
T Consensus       130 iHrDlKp~NIll~~~-~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~--------~~~~~~~DiwSlGvil~  200 (273)
T d1mp8a_         130 VHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF--------RRFTSASDVWMFGVCMW  200 (273)
T ss_dssp             CCSCCSGGGEEEEET-TEEEECC-------------------CCGGGCCHHHHHH--------CCCSHHHHHHHHHHHHH
T ss_pred             eccccchhheeecCC-CcEEEccchhheeccCCcceeccceecCcccchhhHhcc--------CCCCCccccccchHHHH
Confidence            799999999999976 689999999998643322  2234568899999999853        67899999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ||++ |.+||.+...... .........++.|..+++++.+|+.+||..||.+|||+.++++.|+.++..
T Consensus       201 e~lt~g~~P~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         201 EILMHGVKPFQGVKNNDV-IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             HHHTTSCCTTTTCCGGGH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            9997 8899987665433 334455666778889999999999999999999999999999999887653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-33  Score=217.28  Aligned_cols=132  Identities=26%  Similarity=0.495  Sum_probs=109.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+|+.... .......+||+.|+|||++.+        ..|+.++|+||+||++||
T Consensus       127 iHRDlKP~NILl~~~-g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~--------~~y~~~~DiwSlGvilye  197 (337)
T d1o6la_         127 VYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--------NDYGRAVDWWGLGVVMYE  197 (337)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSS--------SCBCTTHHHHHHHHHHHH
T ss_pred             cccccCHHHeEecCC-CCEEEeecccccccccCCcccccceeCHHHhhhhhccC--------CCCChhhcccchhhHHHH
Confidence            799999999999977 6899999999985433 334456789999999999854        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~  145 (198)
                      |++|+.||.+.......  .......+.+|..+++++.+|+.+||+.||.+|++     +.++++  |.|+
T Consensus       198 ml~G~~pf~~~~~~~~~--~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~--Hp~f  264 (337)
T d1o6la_         198 MMCGRLPFYNQDHERLF--ELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME--HRFF  264 (337)
T ss_dssp             HHHSSCSSCCSSHHHHH--HHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT--SGGG
T ss_pred             HHHCCCCCCCcCHHHHH--HHHhcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc--Cccc
Confidence            99999999987654332  23334556788899999999999999999999994     888888  5554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-34  Score=217.38  Aligned_cols=139  Identities=28%  Similarity=0.455  Sum_probs=108.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... ....+.+||+.|+|||++....   .....|+.++||||+||++||
T Consensus       132 vHrDiKp~NIll~~~-~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~---~~~~~y~~k~DiwSlGvilye  207 (288)
T d2jfla1         132 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET---SKDRPYDYKADVWSLGITLIE  207 (288)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCS---TTTSSTTTHHHHHHHHHHHHH
T ss_pred             EEeecChhheeECCC-CCEEEEechhhhccCCCcccccccccccccCCHHHHhhcc---cCCCCCChhhhHHHHHHHHHH
Confidence            699999999999977 67999999999754332 2234678999999999974311   123568899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccC-CCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      |++|..||.+............... ....+..+++++.+|+.+||+.||.+|||++|+++  |.|+
T Consensus       208 mltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~--hp~~  272 (288)
T d2jfla1         208 MAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ--HPFV  272 (288)
T ss_dssp             HHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--SGGG
T ss_pred             HhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc--Cccc
Confidence            9999999988776544433332221 22345678999999999999999999999999998  5665

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-33  Score=212.75  Aligned_cols=141  Identities=28%  Similarity=0.364  Sum_probs=108.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++..... ......+||+.|+|||++..       ...|+.++||||+||++||
T Consensus       122 iHrDiKp~NIli~~~-~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DiwSlGvil~e  193 (299)
T d1ua2a_         122 LHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG-------ARMYGVGVDMWAVGCILAE  193 (299)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTT-------CSCCCHHHHHHHHHHHHHH
T ss_pred             ecccCCcceEEecCC-CccccccCccccccCCCcccccceecChhhccHHHHcc-------CCCCChhhhhhhcchHHHH
Confidence            799999999999976 68999999999755432 23345689999999998753       3567999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC---------------------C-----CCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP---------------------G-----LPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~-----~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      |++|..||.+................+                     .     ....+++++.+|+.+||..||++|||
T Consensus       194 l~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s  273 (299)
T d1ua2a_         194 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  273 (299)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             HHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC
Confidence            999999998877655433222110000                     0     01246789999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCC
Q 029154          134 FSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~~  151 (198)
                      ++|+++  |.|+.....+
T Consensus       274 a~e~L~--Hp~f~~~p~p  289 (299)
T d1ua2a_         274 ATQALK--MKYFSNRPGP  289 (299)
T ss_dssp             HHHHHT--SGGGTSSSCC
T ss_pred             HHHHhC--CHhhCCCCCC
Confidence            999999  7887654433

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-33  Score=212.70  Aligned_cols=137  Identities=25%  Similarity=0.330  Sum_probs=110.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|+|||++.+        ..|+.++||||+||++|||
T Consensus       138 vHrDiKp~NILi~~~-~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~--------~~y~~~~DiwSlG~il~el  208 (305)
T d1blxa_         138 VHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--------SSYATPVDLWSVGCIFAEM  208 (305)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTT--------CCCCTHHHHHHHHHHHHHH
T ss_pred             EecCCCccEEEEcCC-CCeeecchhhhhhhcccccCCCcccChhhcCcchhcC--------CCCChhehhhchHHHHHHH
Confidence            799999999999966 6899999999987666566667899999999999854        6789999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC-------------------------CCCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR-------------------------PGLPEDISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|+.||.+................                         ...+..+++.+.+|+.+||..||.+|||+.
T Consensus       209 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~  288 (305)
T d1blxa_         209 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY  288 (305)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHH
Confidence            9999999887654433322111000                         012345789999999999999999999999


Q ss_pred             HHHHHHHHHHhhc
Q 029154          136 QIIRMLNAFLFTL  148 (198)
Q Consensus       136 ~~l~~l~~~~~~~  148 (198)
                      |+++  |.|+...
T Consensus       289 e~L~--Hpff~~i  299 (305)
T d1blxa_         289 SALS--HPYFQDL  299 (305)
T ss_dssp             HHHT--SGGGTTC
T ss_pred             HHhc--ChhhcCc
Confidence            9999  7776544

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-33  Score=207.91  Aligned_cols=133  Identities=25%  Similarity=0.505  Sum_probs=110.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc--ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM--MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++.......  .....||+.|+|||.+..        ..++.++|||||||++|
T Consensus       122 iH~dlk~~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~ksDiwS~G~~l~  192 (258)
T d1k2pa_         122 LHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY--------SKFSSKSDIWAFGVLMW  192 (258)
T ss_dssp             CCSCCSGGGEEECTT-CCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHH--------CCCCHHHHHHHHHHHHH
T ss_pred             ccccccceeEEEcCC-CcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcC--------CCCCcceeecccchhhH
Confidence            799999999999976 6899999999975433222  223578999999999854        56899999999999999


Q ss_pred             HHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           79 ELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        79 e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      ||++ |+.||.+..... .........++..|..+++++.+|+.+||+.||.+|||+++++++|.+
T Consensus       193 el~t~g~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         193 EIYSLGKMPYERFTNSE-TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHTTSCCTTTTSCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             hHHhcCCCCCCCCCHHH-HHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            9998 899998877543 344445566777888899999999999999999999999999998854

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.5e-33  Score=218.71  Aligned_cols=135  Identities=24%  Similarity=0.396  Sum_probs=108.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+|+...... ....+||+.|+|||++..       ...|+.++||||+||++|||
T Consensus       129 iHrDlKP~NILl~~~-g~iKl~DFGla~~~~~~~-~~~~~GT~~y~APE~~~~-------~~~~~~~~DiwSlGvilyem  199 (364)
T d1omwa3         129 VYRDLKPANILLDEH-GHVRISDLGLACDFSKKK-PHASVGTHGYMAPEVLQK-------GVAYDSSADWFSLGCMLFKL  199 (364)
T ss_dssp             ECCCCSGGGEEECSS-SCEEECCCTTCEECSSSC-CCSCCSCGGGCCHHHHST-------TCCCCTHHHHHHHHHHHHHH
T ss_pred             cceeeccceeEEcCC-CcEEEeeeceeeecCCCc-ccccccccccchhHHhhc-------CCCCCcccchhHHHHHHHHH
Confidence            699999999999976 689999999998654432 345689999999999853       35689999999999999999


Q ss_pred             HcCCCCCCCCCcHHH-HHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQA-AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPS-----FSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps-----~~~~l~~l~~~~~  146 (198)
                      ++|+.||.+...... .............|..+++++.+|+.+||..||.+||+     ++++++  |.|+.
T Consensus       200 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~--Hp~f~  269 (364)
T d1omwa3         200 LRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE--SPFFR  269 (364)
T ss_dssp             HHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT--SGGGT
T ss_pred             HhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc--Ccccc
Confidence            999999976543221 22223344556677889999999999999999999999     788988  66654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-33  Score=217.39  Aligned_cols=131  Identities=23%  Similarity=0.360  Sum_probs=107.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ..+.+||+.|||||++.+        ..++.++||||+||++|||
T Consensus       163 iHRDIKP~NILl~~~-g~ikL~DFG~a~~~~~~--~~~~~Gt~~Y~APE~~~~--------~~~~~~~DiwSlGvilyem  231 (350)
T d1rdqe_         163 IYRDLKPENLLIDQQ-GYIQVTDFGFAKRVKGR--TWTLCGTPEALAPEIILS--------KGYNKAVDWWALGVLIYEM  231 (350)
T ss_dssp             ECCCCSGGGEEECTT-SCEEECCCTTCEECSSC--BCCCEECGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHHH
T ss_pred             ecCcCCHHHcccCCC-CCEEeeeceeeeecccc--cccccCccccCCHHHHcC--------CCCCccccccchhHHHHHH
Confidence            699999999999977 68999999999865432  345689999999999864        6689999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      ++|..||.+.........  .....+..|..+++++.+|+.+||..||.+|+     +++++++  |.|+.
T Consensus       232 ltG~~Pf~~~~~~~~~~~--i~~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~--Hp~f~  298 (350)
T d1rdqe_         232 AAGYPPFFADQPIQIYEK--IVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN--HKWFA  298 (350)
T ss_dssp             HHSSCSSCCSSHHHHHHH--HHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT--SGGGT
T ss_pred             HhCCCCCCCcCHHHHHHH--HhcCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc--Ccccc
Confidence            999999988765433322  23345567788999999999999999999994     8999998  55543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-33  Score=213.95  Aligned_cols=131  Identities=25%  Similarity=0.411  Sum_probs=108.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  ..+.+||+.|+|||++.+        ..|+.++||||+||++|+|
T Consensus       126 iHrDiKp~NILl~~~-g~vkL~DFG~a~~~~~~--~~~~~Gt~~Y~APE~l~~--------~~y~~~~DiwSlGvilyem  194 (316)
T d1fota_         126 IYRDLKPENILLDKN-GHIKITDFGFAKYVPDV--TYTLCGTPDYIAPEVVST--------KPYNKSIDWWSFGILIYEM  194 (316)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCSSCEECSSC--BCCCCSCTTTCCHHHHTT--------CCBCTTHHHHHHHHHHHHH
T ss_pred             EccccCchheeEcCC-CCEEEecCccceEeccc--cccccCcccccCHHHHcC--------CCCCchhhccccchhHHHH
Confidence            699999999999976 68999999999865432  345789999999999853        5688999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~~  146 (198)
                      ++|+.||.+..........  .......|..+++++.+++.+||..||.+|+     +++++++  |.|+.
T Consensus       195 ltG~~Pf~~~~~~~~~~~i--~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~--Hp~f~  261 (316)
T d1fota_         195 LAGYTPFYDSNTMKTYEKI--LNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN--HPWFK  261 (316)
T ss_dssp             HHSSCTTCCSSHHHHHHHH--HHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT--SGGGS
T ss_pred             HhCCCCCCCcCHHHHHHHH--HcCCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc--Ccccc
Confidence            9999999887654433322  2344567788999999999999999999996     8999988  55543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=214.59  Aligned_cols=139  Identities=31%  Similarity=0.530  Sum_probs=112.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++............||..|+|||.+..        ..++.++|||||||++|||
T Consensus       149 iHrDlkp~NIL~~~~-~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~~sDvwSfGvil~el  219 (309)
T d1fvra_         149 IHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--------SVYTTNSDVWSYGVLLWEI  219 (309)
T ss_dssp             ECSCCSGGGEEECGG-GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHH--------CEECHHHHHHHHHHHHHHH
T ss_pred             cccccccceEEEcCC-CceEEccccccccccccccccceecCCcccchHHhcc--------CCCCccceeehhHHHHHHH
Confidence            699999999999977 6899999999986554433345578999999999854        5689999999999999999


Q ss_pred             HcCC-CCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhcC
Q 029154           81 LTNR-LPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus        81 ~~g~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~~  149 (198)
                      ++|. +||.+... ...........++..|..+++++.+|+.+||..||++|||+.+++++|+.++....
T Consensus       220 l~~~~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~  288 (309)
T d1fvra_         220 VSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  288 (309)
T ss_dssp             HTTSCCTTTTCCH-HHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             HhcCCCCCCCCCH-HHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence            9975 56766543 44444455667778888999999999999999999999999999999999876443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=215.21  Aligned_cols=136  Identities=26%  Similarity=0.508  Sum_probs=109.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccccc---ccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEM---MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++.......   .....||+.|+|||++.+        +.|+.++|||||||++
T Consensus       133 iHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~--------~~~~~~sDvwS~Gvil  203 (317)
T d1xkka_         133 VHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--------RIYTHQSDVWSYGVTV  203 (317)
T ss_dssp             CCSCCCGGGEEEEET-TEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             ccCcchhhcceeCCC-CCeEeeccccceecccccccccccccccCccccChHHHhc--------CCCChhhhhhhHHHHH
Confidence            799999999999976 7899999999985433221   223468999999999854        5789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |||++ |..||.+..... .........+++.|..+++++.+|+.+||..||.+|||+.+++++|..+..
T Consensus       204 ~el~t~g~~p~~~~~~~~-~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         204 WELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHTTSCCTTTTSCGGG-HHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCHHH-HHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            99998 788888765433 334445566677888899999999999999999999999999999877643

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-33  Score=209.32  Aligned_cols=137  Identities=30%  Similarity=0.615  Sum_probs=114.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......|++.|+|||.+.+        +.|+.++||||||+++
T Consensus       157 vHrDiKp~NiLl~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~--------~~y~~k~DiwS~Gvvl  227 (299)
T d1fgka_         157 IHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD--------RIYTHQSDVWSFGVLL  227 (299)
T ss_dssp             CCSCCSGGGEEECTT-CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             EeeeecccceeecCC-CCeEeccchhhccccccccccccccCCCChhhhhhhHhcC--------CCCCchhhhHHhHHHH
Confidence            799999999999977 679999999998543322   2234578999999999853        6789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||++ |.+||.+... ............+..|..+++++.+|+.+||+.||.+|||+.|+++.|+.+++.
T Consensus       228 ~ell~~g~~p~~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         228 WEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             HHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhccCCCCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence            99998 6888876554 344455556677788889999999999999999999999999999999988764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-33  Score=211.60  Aligned_cols=138  Identities=31%  Similarity=0.480  Sum_probs=111.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++......     ......||..|+|||.+..        ..++.++||||||+
T Consensus       152 iHrDLK~~NILl~~~-~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDI~SfGi  222 (311)
T d1r0pa_         152 VHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGV  222 (311)
T ss_dssp             CCSCCSGGGEEECTT-CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHH--------CCCCHHHHHHHHHH
T ss_pred             ccCCccHHhEeECCC-CCEEEecccchhhccccccccceecccccccccccChHHHhc--------CCCCChhHhhhhHH
Confidence            799999999999966 789999999998543321     1223468999999998753        67899999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ++|||++|..||.................++..|..+++++.+|+.+||..||.+||++.|++++|+.+...
T Consensus       223 vl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         223 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            999999988777655544444445556677778888999999999999999999999999999999988764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.7e-33  Score=217.27  Aligned_cols=138  Identities=25%  Similarity=0.327  Sum_probs=109.0

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ .+.+||+|||+++.........+.+||+.|+|||++.+        ..++.++||||+||++|+
T Consensus       146 iHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~--------~~~~~~~DiwSlGvilye  217 (350)
T d1koaa2         146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG--------KPVGYYTDMWSVGVLSYI  217 (350)
T ss_dssp             ECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHT--------CCBCHHHHHHHHHHHHHH
T ss_pred             eeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcC--------CCCChhHhhhhhhHHHHH
Confidence            699999999999642 36799999999986655454556789999999999853        568899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhc
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      |++|..||.+.................  ..+..+++++.+|+.+||..||.+|||++|+++  |.|+...
T Consensus       218 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~--hp~~~~~  286 (350)
T d1koaa2         218 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE--HPWLTPG  286 (350)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH--STTTSCT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc--CcccCCC
Confidence            999999998776544333332222221  222458899999999999999999999999999  6776543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-33  Score=210.09  Aligned_cols=134  Identities=28%  Similarity=0.560  Sum_probs=108.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    ......|+..|+|||++.+        ..++.++||||||++
T Consensus       133 iHrDikp~NIll~~~-~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~~~Di~S~Gvi  203 (273)
T d1u46a_         133 IHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT--------RTFSHASDTWMFGVT  203 (273)
T ss_dssp             ECSCCCGGGEEEEET-TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH--------CEEEHHHHHHHHHHH
T ss_pred             eeeeecHHHhccccc-cceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhC--------CCCCcchhhhhhHHH
Confidence            699999999999977 689999999998543221    1223467889999999864        567899999999999


Q ss_pred             HHHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 029154           77 LWELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA  143 (198)
Q Consensus        77 l~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~  143 (198)
                      +|||++ |..||.+................++.+..+++++.+|+.+||..||.+||||.++++.|..
T Consensus       204 l~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         204 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            999998 8999998776655444444556677788899999999999999999999999999998865

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.98  E-value=2.5e-33  Score=216.55  Aligned_cols=137  Identities=20%  Similarity=0.335  Sum_probs=110.2

Q ss_pred             CCCCCCCCCeEEcC-CCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTP-DQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~-~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++. +.+.+||+|||+++............||+.|+|||++.+        ..++.++||||+||++|+
T Consensus       149 iHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvilye  220 (352)
T d1koba_         149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR--------EPVGFYTDMWAIGVLGYV  220 (352)
T ss_dssp             ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT--------CCBCHHHHHHHHHHHHHH
T ss_pred             eecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcC--------CCCCCccchHHHHHHHHH
Confidence            69999999999973 336799999999987655554556789999999999853        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC--CCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR--PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |++|..||.+................  ...+..+++++.+|+.+||..||.+|||+.|+++  |.|+..
T Consensus       221 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~--Hp~~~~  288 (352)
T d1koba_         221 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE--HPWLKG  288 (352)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT--STTTSS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc--CHhhCC
Confidence            99999999987765443333322222  2334568999999999999999999999999998  666653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.5e-33  Score=211.02  Aligned_cols=128  Identities=23%  Similarity=0.437  Sum_probs=104.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+.+.+||+|||+++..... ...+.+||+.|+|||++.+       ...++.++||||+||++|||
T Consensus       132 iHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~-~~~~~~GT~~y~aPE~~~~-------~~~~~~~~DiwSlGvilyel  203 (273)
T d1xwsa_         132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRY-------HRYHGRSAAVWSLGILLYDM  203 (273)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHH-------SCBCHHHHHHHHHHHHHHHH
T ss_pred             ccccCcccceEEecCCCeEEECccccceecccc-cccccccCCCcCCHHHHcC-------CCCCCcccccccceeeehhH
Confidence            699999999999876578999999999754432 3456789999999999854       23346779999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ++|+.||.+...        ........+..+++++.+|+.+||..||.+|||++|+++  +.|+.
T Consensus       204 l~g~~Pf~~~~~--------i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~--hp~~~  259 (273)
T d1xwsa_         204 VCGDIPFEHDEE--------IIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN--HPWMQ  259 (273)
T ss_dssp             HHSSCSCCSHHH--------HHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGGS
T ss_pred             hhCCCCCCCchH--------HhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc--CHhhC
Confidence            999999975321        112344567789999999999999999999999999998  66654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-32  Score=208.02  Aligned_cols=138  Identities=31%  Similarity=0.550  Sum_probs=113.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+|++|||+++......   .....+||+.|+|||++..        ..++.++|||||||++
T Consensus       167 vHrDLKp~NIl~~~~-~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DIwS~G~~l  237 (311)
T d1t46a_         167 IHRDLAARNILLTHG-RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN--------CVYTFESDVWSYGIFL  237 (311)
T ss_dssp             CCSCCSGGGEEEETT-TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             eeccccccccccccc-CcccccccchheeccCCCcceEeeecccChHHcCHHHhcC--------CCCCCcccccchHHHH
Confidence            799999999999976 789999999998554322   2234578999999999853        6789999999999999


Q ss_pred             HHHHc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           78 WELLT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        78 ~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      |||++ |.+||.+...............++..|..+++++.+|+.+||+.||.+|||+++++++|+..+..
T Consensus       238 ~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         238 WELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            99998 66667665554444445555677777888999999999999999999999999999999887654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.9e-33  Score=209.10  Aligned_cols=136  Identities=20%  Similarity=0.300  Sum_probs=108.3

Q ss_pred             CCCCCCCCCeEEcCCCC---ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK---SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~---~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.++.   .+||+|||+++............||+.|+|||++.+        ..++.++||||+||++
T Consensus       135 vHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~--------~~~~~~~DiwSlGvil  206 (293)
T d1jksa_         135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY--------EPLGLEADMWSIGVIT  206 (293)
T ss_dssp             ECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTT--------CCBCTHHHHHHHHHHH
T ss_pred             eecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcC--------CCCCCcccchhhhHHH
Confidence            69999999999986632   599999999987655555566789999999999853        5689999999999999


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           78 WELLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        78 ~e~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |||++|..||.+.................  ..+..+++++.+|+.+||..||.+|||++|+++  |.|+.
T Consensus       207 yell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~--hp~~~  275 (293)
T d1jksa_         207 YILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ--HPWIK  275 (293)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--STTTC
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc--CcccC
Confidence            99999999999876544333222211111  223568999999999999999999999999998  66664

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=1.6e-32  Score=205.64  Aligned_cols=140  Identities=24%  Similarity=0.367  Sum_probs=110.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++...........+||+.|++||.+.+....  ....++.++||||+||++|+|
T Consensus       132 vHrDlkp~Nill~~~-~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~--~~~~~~~~~DiwslGvilyem  208 (277)
T d1phka_         132 VHRDLKPENILLDDD-MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND--NHPGYGKEVDMWSTGVIMYTL  208 (277)
T ss_dssp             ECSCCSGGGEEECTT-CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCT--TSCCBCTHHHHHHHHHHHHHH
T ss_pred             cccccccceEEEcCC-CCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccc--cCCCCCchheEcccchhhhhh
Confidence            699999999999976 78999999999866554445567899999999998642211  234578899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCCCC--CCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHARPG--LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++|+.||.+................+.  ....+++++.+|+.+||..||.+|||++|+++  |.|+
T Consensus       209 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~--h~~~  273 (277)
T d1phka_         209 LAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA--HPFF  273 (277)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT--SGGG
T ss_pred             ccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc--CHHH
Confidence            999999998776554433333333322  23468999999999999999999999999988  5554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.5e-32  Score=209.73  Aligned_cols=137  Identities=23%  Similarity=0.477  Sum_probs=105.1

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+  .+.+||+|||+++...........+||+.|+|||++.+        ..|+.++||||+||++|
T Consensus       133 iHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~y~~~~DiwSlGvily  204 (335)
T d2ozaa1         133 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP--------EKYDKSCDMWSLGVIMY  204 (335)
T ss_dssp             ECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCG--------GGGSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcC--------CCCCHHHHHHhhchhHH
Confidence            699999999999853  24699999999986655555566789999999999854        56899999999999999


Q ss_pred             HHHcCCCCCCCCCcHHHHH--HHHHccCCCCCC----CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154           79 ELLTNRLPFEGMSNLQAAY--AAAFKHARPGLP----EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus        79 e~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~p----~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      +|++|+.||.+........  ..........+|    ..+++++.+|+.+||..||++|||+.|+++  |.|+..
T Consensus       205 ~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~--hp~~~~  277 (335)
T d2ozaa1         205 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN--HPWIMQ  277 (335)
T ss_dssp             HHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH--SHHHHT
T ss_pred             HHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc--CHHhhC
Confidence            9999999997654322211  111111222233    247899999999999999999999999998  676643

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=5.4e-32  Score=202.94  Aligned_cols=135  Identities=28%  Similarity=0.455  Sum_probs=101.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc----ccccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +..+|+|||+++.....    ......+||+.|+|||++.+        ..++.++||||+||+
T Consensus       133 iHrDiKP~NIll~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--------~~~~~~~DiwSlGvi  203 (277)
T d1o6ya_         133 IHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG--------DSVDARSDVYSLGCV  203 (277)
T ss_dssp             ECCCCSGGGEEEETT-SCEEECCCTTCEECC----------------TTCCHHHHTT--------CCCCHHHHHHHHHHH
T ss_pred             cCccccCcccccCcc-ccceeehhhhhhhhccccccccccccccCcccccCHHHHcC--------CCCCcceecccchHH
Confidence            699999999999976 67999999998643221    12344689999999999853        568999999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHH
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRP-SFSQIIRMLNAF  144 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rp-s~~~~l~~l~~~  144 (198)
                      +|||++|+.||.+................+  .....+++++.+++.+||+.||.+|| ++++++..|..+
T Consensus       204 lyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         204 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            999999999999877655544444333332  23456899999999999999999998 899988877654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-32  Score=209.09  Aligned_cols=132  Identities=27%  Similarity=0.503  Sum_probs=108.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++.+        ..++.++||||+||++||
T Consensus       125 iHrDikp~NiL~~~~-~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvilye  195 (320)
T d1xjda_         125 VYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG--------QKYNHSVDWWSFGVLLYE  195 (320)
T ss_dssp             BCCCCCGGGEEECTT-SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT--------CCBCTHHHHHHHHHHHHH
T ss_pred             eeccCcccceeecCC-CceeccccchhhhcccccccccccCCCCCcCCHHHHcC--------CCCCchhhhhhhhHHHHH
Confidence            799999999999976 6899999999985433 233445689999999999864        678999999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHHH
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFS-QIIRMLNAFL  145 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~-~~l~~l~~~~  145 (198)
                      |++|+.||.+.........  .....+..|..+++++.+|+.+||..||.+||++. ++++  |.|+
T Consensus       196 mltG~~PF~~~~~~~~~~~--i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~--hpff  258 (320)
T d1xjda_         196 MLIGQSPFHGQDEEELFHS--IRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ--HPLF  258 (320)
T ss_dssp             HHHSSCSSCCSSHHHHHHH--HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG--SGGG
T ss_pred             HHhCCCCCCCCCHHHHHHH--HHcCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh--Cchh
Confidence            9999999998765433222  23455677888999999999999999999999995 7876  4444

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.3e-32  Score=205.83  Aligned_cols=134  Identities=28%  Similarity=0.531  Sum_probs=109.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc---cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE---MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVL   77 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l   77 (198)
                      |||||||+|||++.+ +.+||+|||+++......   ......||+.|++||.+.+        ..++.++||||||+++
T Consensus       155 vHrDlk~~NiLld~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~--------~~~~~~~Dv~S~G~il  225 (308)
T d1p4oa_         155 VHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD--------GVFTTYSDVWSFGVVL  225 (308)
T ss_dssp             BCSCCSGGGEEECTT-CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH--------CCCCHHHHHHHHHHHH
T ss_pred             eeceEcCCceeecCC-ceEEEeecccceeccCCcceeeccceecccccCCHHHHcc--------CCCCcccccccHHHHH
Confidence            699999999999976 789999999998543322   2234568999999999854        6688999999999999


Q ss_pred             HHHHcCC-CCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           78 WELLTNR-LPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        78 ~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |||++|. .||.+.... ...........+..|..+++.+.+++.+||+.||.+|||+.+++++|+..
T Consensus       226 ~El~t~~~~p~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         226 WEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHHHHTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHhCCCCCCCCCCHH-HHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            9999985 677765543 33444556667778888999999999999999999999999999988654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.2e-32  Score=200.87  Aligned_cols=133  Identities=29%  Similarity=0.583  Sum_probs=104.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+||+|||+++.....  .....++..|+|||++.+        ..++.++|||||||++|||
T Consensus       125 vH~dlkp~Nil~~~~-~~~kl~dfg~s~~~~~~--~~~~~~~~~y~aPE~l~~--------~~~t~~sDIwSfG~il~el  193 (262)
T d1byga_         125 VHRDLAARNVLVSED-NVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALRE--------KKFSTKSDVWSFGILLWEI  193 (262)
T ss_dssp             CCSCCSGGGEEECTT-SCEEECCCCC--------------CCTTTSCHHHHHH--------CCCCHHHHHHHHHHHHHHH
T ss_pred             eccccchHhheecCC-CCEeecccccceecCCC--CccccccccCCChHHHhC--------CCCChHHHHHhHHHHHHHH
Confidence            799999999999977 67999999999854332  234567899999999853        5789999999999999999


Q ss_pred             Hc-CCCCCCCCCcHHHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 029154           81 LT-NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL  145 (198)
Q Consensus        81 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~  145 (198)
                      ++ |.+||.+..... .........+++.|..+++++.+|+.+||..||.+|||+.+++++|+.+.
T Consensus       194 ~t~~~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         194 YSFGRVPYPRIPLKD-VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             HTTSCCSCTTSCGGG-HHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHCCCCCCCCCCHHH-HHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            98 688887765433 33444556778888999999999999999999999999999999998763

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-31  Score=206.75  Aligned_cols=142  Identities=28%  Similarity=0.331  Sum_probs=111.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.++..+||+|||+++.........+.+||..|+|||.+.+       ...++.++||||+||++|||
T Consensus       144 iHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DIwSlG~il~el  216 (350)
T d1q5ka_         144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG-------ATDYTSSIDVWSAGCVLAEL  216 (350)
T ss_dssp             ECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTT-------CSSCCTHHHHHHHHHHHHHH
T ss_pred             cccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhc-------ccCCCcceeecccceEEEeh
Confidence            69999999999997756799999999986655555566789999999998753       35689999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHcc------------------CCC---------CCCCCCcHHHHHHHHHhcccCCCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKH------------------ARP---------GLPEDISPDLAFIVQSCWVEDPNLRPS  133 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~------------------~~~---------~~p~~~~~~~~~l~~~~l~~dp~~Rps  133 (198)
                      ++|..||.+..............                  ..+         ......++++.+|+.+||..||.+|||
T Consensus       217 ~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t  296 (350)
T d1q5ka_         217 LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  296 (350)
T ss_dssp             HHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             hhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcC
Confidence            99999998776544332221100                  000         012347899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCC
Q 029154          134 FSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       134 ~~~~l~~l~~~~~~~~~~  151 (198)
                      +.|+++  |.|+.....+
T Consensus       297 a~e~L~--Hp~f~~~~~~  312 (350)
T d1q5ka_         297 PLEACA--HSFFDELRDP  312 (350)
T ss_dssp             HHHHHT--SGGGGGGGCT
T ss_pred             HHHHhc--CHhhccccCC
Confidence            999998  7777665443

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-31  Score=203.39  Aligned_cols=142  Identities=29%  Similarity=0.420  Sum_probs=108.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc-cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV-TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||+++.... .......+||+.|+|||++..       ...++.++|+||+||++|+
T Consensus       124 iHrDiKpeNIl~~~~-~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~-------~~~~~~~~DiwSlGvily~  195 (298)
T d1gz8a_         124 LHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-------CKYYSTAVDIWSLGCIFAE  195 (298)
T ss_dssp             CCSCCCGGGEEECTT-SCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTT-------CSSCCTHHHHHHHHHHHHH
T ss_pred             EccccCchheeeccc-CcceeccCCcceeccCCcccceeecccceeeehhhhcc-------ccCCCccccccccchhhhH
Confidence            799999999999977 6899999999975432 233445689999999998753       3456889999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC----------------CC-----------CCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP----------------GL-----------PEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------~~-----------p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      |++|+.||.+................+                ..           ...+++++.+|+.+||..||.+||
T Consensus       196 m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~  275 (298)
T d1gz8a_         196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI  275 (298)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCc
Confidence            999999998876554433322111110                00           123578899999999999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCCC
Q 029154          133 SFSQIIRMLNAFLFTLRPPS  152 (198)
Q Consensus       133 s~~~~l~~l~~~~~~~~~~~  152 (198)
                      |+.|+++  |.|+.....|.
T Consensus       276 t~~ell~--H~ff~~~~~p~  293 (298)
T d1gz8a_         276 SAKAALA--HPFFQDVTKPV  293 (298)
T ss_dssp             CHHHHHT--SGGGTTCCCCC
T ss_pred             CHHHHhC--CHhhccCCCCC
Confidence            9999999  78876655543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=3.6e-31  Score=200.44  Aligned_cols=140  Identities=19%  Similarity=0.252  Sum_probs=104.6

Q ss_pred             CCCCCCCCCeEEcCC--CCceEEecccCcccCcccc--------cccCCCCccceecccccccccccccccCCCCchhhH
Q 029154            1 MGKFMKEDNLLLTPD--QKSLKLADFGLAREETVTE--------MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDV   70 (198)
Q Consensus         1 iH~dlKp~NIll~~~--~~~~kl~DfGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dv   70 (198)
                      |||||||+|||++..  +..+||+|||+++......        .....+||+.|+|||++.+        ..++.++||
T Consensus       125 iHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di  196 (299)
T d1ckia_         125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG--------IEQSRRDDL  196 (299)
T ss_dssp             ECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT--------BCCCHHHHH
T ss_pred             eeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhC--------CCCCChhhE
Confidence            699999999998642  2469999999998543221        1234579999999999853        568999999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCcHHHHHH------HHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 029154           71 YSFGIVLWELLTNRLPFEGMSNLQAAYA------AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF  144 (198)
Q Consensus        71 ws~G~~l~e~~~g~~p~~~~~~~~~~~~------~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~  144 (198)
                      |||||++|||++|..||.+.........      ..........+..+++++.+++.+||..||.+||+++++.+.|+.+
T Consensus       197 wSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             EecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            9999999999999999976553322111      1111111223457899999999999999999999999999999887


Q ss_pred             Hhhc
Q 029154          145 LFTL  148 (198)
Q Consensus       145 ~~~~  148 (198)
                      ....
T Consensus       277 ~~~~  280 (299)
T d1ckia_         277 FHRQ  280 (299)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            6543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=199.28  Aligned_cols=138  Identities=25%  Similarity=0.346  Sum_probs=104.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCccc-----ccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVT-----EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++.....     ......+||+.|+|||++.+       ...++.++||||+||
T Consensus       139 vHrDlKp~NILl~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~-------~~~~~~k~DiwSlGv  210 (318)
T d3blha1         139 LHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG-------ERDYGPPIDLWGAGC  210 (318)
T ss_dssp             ECCCCCGGGEEECTT-SCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTT-------CSSCCTHHHHHHHHH
T ss_pred             EecCcCchheeecCC-CcEEeeecceeeecccccccccccccceecCHHHhhHHHHcC-------CCCCCcHHHcccCCc
Confidence            699999999999977 67999999999743321     12234579999999999753       356889999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHHHHHHHH--HccCCCCCCC----------------------------CCcHHHHHHHHHhcc
Q 029154           76 VLWELLTNRLPFEGMSNLQAAYAAA--FKHARPGLPE----------------------------DISPDLAFIVQSCWV  125 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~p~----------------------------~~~~~~~~l~~~~l~  125 (198)
                      ++|||++|+.||.+...........  ..........                            ..++++.+|+.+||.
T Consensus       211 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~  290 (318)
T d3blha1         211 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV  290 (318)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred             eeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCc
Confidence            9999999999998876544332221  1111111100                            125678899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhc
Q 029154          126 EDPNLRPSFSQIIRMLNAFLFTL  148 (198)
Q Consensus       126 ~dp~~Rps~~~~l~~l~~~~~~~  148 (198)
                      .||.+|||++|+++  |.|+...
T Consensus       291 ~dP~~R~sa~elL~--Hpff~~~  311 (318)
T d3blha1         291 LDPAQRIDSDDALN--HDFFWSD  311 (318)
T ss_dssp             SSTTTSCCHHHHHH--SGGGSSS
T ss_pred             CChhHCcCHHHHHc--ChhhccC
Confidence            99999999999999  8887643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=5.7e-31  Score=198.16  Aligned_cols=135  Identities=24%  Similarity=0.365  Sum_probs=100.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||++....... ......|++.|++||.+..       ...++.++|+||+||++||
T Consensus       122 vHrDiKp~NIll~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~-------~~~~~~~~DiwslGv~l~e  193 (286)
T d1ob3a_         122 LHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG-------SKKYSTTIDIWSVGCIFAE  193 (286)
T ss_dssp             CCSCCCGGGEEECTT-SCEEECCTTHHHHHCC---------CCCTTCCHHHHTT-------CCSCCTHHHHHHHHHHHHH
T ss_pred             EecCCCCceeeEcCC-CCEEecccccceecccCccccceecccchhhhHHHHhC-------CCCCCcceeehhcCcHHHH
Confidence            799999999999977 689999999997543322 2234578999999999853       3567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCC---------------------------CCCCCCCcHHHHHHHHHhcccCCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHAR---------------------------PGLPEDISPDLAFIVQSCWVEDPNLRP  132 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~p~~~~~~~~~l~~~~l~~dp~~Rp  132 (198)
                      |++|+.||.+................                           ...+..+++++.+|+.+||..||.+||
T Consensus       194 l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  273 (286)
T d1ob3a_         194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI  273 (286)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCc
Confidence            99999999887654443322111000                           012345688999999999999999999


Q ss_pred             CHHHHHHHHHHHH
Q 029154          133 SFSQIIRMLNAFL  145 (198)
Q Consensus       133 s~~~~l~~l~~~~  145 (198)
                      |++|+++  |.|+
T Consensus       274 s~~ell~--Hp~f  284 (286)
T d1ob3a_         274 TAKQALE--HAYF  284 (286)
T ss_dssp             CHHHHHT--SGGG
T ss_pred             CHHHHhc--Cccc
Confidence            9999998  5554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-31  Score=201.18  Aligned_cols=145  Identities=21%  Similarity=0.340  Sum_probs=100.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-----cccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.+ +.+||+|||+++......     .....+||+.|+|||++......  ....++.++|||||||
T Consensus       130 vHrDlKp~NILl~~~-~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~~~~k~Di~S~Gv  206 (303)
T d1vjya_         130 AHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM--KHFESFKRADIYAMGL  206 (303)
T ss_dssp             ECSCCCGGGEEECTT-SCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCT--TCHHHHHHHHHHHHHH
T ss_pred             eccccCccceEEcCC-CCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccc--cCCCcCcchhhhhhHH
Confidence            699999999999977 789999999997443211     22346899999999987531100  0112567899999999


Q ss_pred             HHHHHHcCCCCCCCCC--------------cHHHHHHHH-HccCCCCCCCC-----CcHHHHHHHHHhcccCCCCCCCHH
Q 029154           76 VLWELLTNRLPFEGMS--------------NLQAAYAAA-FKHARPGLPED-----ISPDLAFIVQSCWVEDPNLRPSFS  135 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~--------------~~~~~~~~~-~~~~~~~~p~~-----~~~~~~~l~~~~l~~dp~~Rps~~  135 (198)
                      ++|||++|..||....              ......... ....++.+|..     ....+.+|+.+||+.||.+|||+.
T Consensus       207 vl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  286 (303)
T d1vjya_         207 VFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL  286 (303)
T ss_dssp             HHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHH
T ss_pred             HHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHH
Confidence            9999999987653211              111111111 12233344332     224588999999999999999999


Q ss_pred             HHHHHHHHHHhhc
Q 029154          136 QIIRMLNAFLFTL  148 (198)
Q Consensus       136 ~~l~~l~~~~~~~  148 (198)
                      |+++.|+.+....
T Consensus       287 ei~~~L~~i~~~~  299 (303)
T d1vjya_         287 RIKKTLSQLSQQE  299 (303)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999876543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.5e-31  Score=203.03  Aligned_cols=136  Identities=18%  Similarity=0.228  Sum_probs=107.4

Q ss_pred             CCCCCCCCCeEEcCC-CCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPD-QKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~-~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ ...+||+|||+++...........+||+.|++||.+.+        ..|+.++||||+||++|+
T Consensus       124 iHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~--------~~~~~~~DiWSlGvily~  195 (321)
T d1tkia_         124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH--------DVVSTATDMWSLGTLVYV  195 (321)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT--------CEECHHHHHHHHHHHHHH
T ss_pred             CcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccC--------CCCCchhhcccHHHHHHH
Confidence            699999999999754 24699999999986655444455678999999998753        567899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHccCCC--CCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFKHARP--GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      |++|..||.+.................  ..+..+++++.+|+.+||..||.+|||+.|+++  |.|+.
T Consensus       196 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~--hp~~~  262 (321)
T d1tkia_         196 LLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ--HPWLK  262 (321)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--SHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc--CHhhc
Confidence            999999998877544433333222221  112468999999999999999999999999998  66664

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-30  Score=199.85  Aligned_cols=140  Identities=26%  Similarity=0.338  Sum_probs=105.7

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc----cccCCCCccceecccccccccccccccCCCCchhhHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE----MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIV   76 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~   76 (198)
                      |||||||+|||++.+ +.+||+|||+++......    .....+||+.|+|||++..       ...++.++||||+||+
T Consensus       131 iHRDIKp~NILl~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~~~DiwSlG~i  202 (345)
T d1pmea_         131 LHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-------SKGYTKSIDIWSVGCI  202 (345)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTT-------BCSCSTHHHHHHHHHH
T ss_pred             cCCCCCcceEEECCC-CCEEEcccCceeeccCCCccceeeccccccceechHHHhhc-------CCCCCchhhhhccCce
Confidence            699999999999976 689999999997543221    2345679999999999753       3567889999999999


Q ss_pred             HHHHHcCCCCCCCCCcHHHHHHHHHcc----------------------CCC-------CCCCCCcHHHHHHHHHhcccC
Q 029154           77 LWELLTNRLPFEGMSNLQAAYAAAFKH----------------------ARP-------GLPEDISPDLAFIVQSCWVED  127 (198)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~~~~~~~~----------------------~~~-------~~p~~~~~~~~~l~~~~l~~d  127 (198)
                      +|+|++|+.||.+..............                      ...       .....+++++.+|+.+||..|
T Consensus       203 l~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  282 (345)
T d1pmea_         203 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN  282 (345)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSS
T ss_pred             ehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCC
Confidence            999999999998766433322211100                      000       012356789999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhhcCC
Q 029154          128 PNLRPSFSQIIRMLNAFLFTLRP  150 (198)
Q Consensus       128 p~~Rps~~~~l~~l~~~~~~~~~  150 (198)
                      |.+|||+.++++  +.|+.....
T Consensus       283 P~~R~ta~e~L~--hpf~~~~~~  303 (345)
T d1pmea_         283 PHKRIEVEQALA--HPYLEQYYD  303 (345)
T ss_dssp             TTTSCCHHHHHT--SGGGTTTCC
T ss_pred             hhHCcCHHHHhc--CHhhccCCC
Confidence            999999999999  777664433

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-30  Score=198.69  Aligned_cols=137  Identities=25%  Similarity=0.370  Sum_probs=107.3

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+|++|||+++.....  .+..+||+.|+|||++.+       ...++.++||||+||++|+|
T Consensus       143 iHrDiKp~NIL~~~~-~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwSlGvil~el  212 (346)
T d1cm8a_         143 IHRDLKPGNLAVNED-CELKILDFGLARQADSE--MTGYVVTRWYRAPEVILN-------WMRYTQTVDIWSVGCIMAEM  212 (346)
T ss_dssp             ECCCCCGGGEEECTT-CCEEECCCTTCEECCSS--CCSSCSCGGGCCTHHHHT-------TTCCCTTHHHHHHHHHHHHH
T ss_pred             cccccCcchhhcccc-cccccccccceeccCCc--cccccccccccCHHHHcC-------CCCCCccchhhcchHHHHHH
Confidence            699999999999977 68999999999865432  345789999999999853       35678999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC-----------------------------CCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR-----------------------------PGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+................                             ......+++++.+|+.+||..||.+|
T Consensus       213 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R  292 (346)
T d1cm8a_         213 ITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQR  292 (346)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTS
T ss_pred             HHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHC
Confidence            9999999887654433221110000                             01234578999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcC
Q 029154          132 PSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~  149 (198)
                      ||+.|+++  |.|+....
T Consensus       293 ~ta~eiL~--Hp~f~~~~  308 (346)
T d1cm8a_         293 VTAGEALA--HPYFESLH  308 (346)
T ss_dssp             CCHHHHHH--SGGGTTTC
T ss_pred             cCHHHHhc--ChhhCcCC
Confidence            99999999  77876544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=4.3e-30  Score=193.97  Aligned_cols=141  Identities=16%  Similarity=0.240  Sum_probs=106.9

Q ss_pred             CCCCCCCCCeEEcCC----CCceEEecccCcccCccc--------ccccCCCCccceecccccccccccccccCCCCchh
Q 029154            1 MGKFMKEDNLLLTPD----QKSLKLADFGLAREETVT--------EMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKV   68 (198)
Q Consensus         1 iH~dlKp~NIll~~~----~~~~kl~DfGla~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~   68 (198)
                      |||||||+|||++.+    .+.+||+|||+++.....        ......+||+.|||||++.+        ..++.++
T Consensus       123 iHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~--------~~~~~~~  194 (293)
T d1csna_         123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG--------REQSRRD  194 (293)
T ss_dssp             ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--------CCCCHHH
T ss_pred             eeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcC--------CCCChHH
Confidence            699999999999742    356999999999854321        12234579999999999853        6789999


Q ss_pred             hHHHHHHHHHHHHcCCCCCCCCCcH--HHHHHH----HHccCCCCCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 029154           69 DVYSFGIVLWELLTNRLPFEGMSNL--QAAYAA----AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN  142 (198)
Q Consensus        69 Dvws~G~~l~e~~~g~~p~~~~~~~--~~~~~~----~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~  142 (198)
                      ||||+|+++|||++|..||.+....  ......    ........++..+++++.+++..|+..+|++||+++.+.+.|+
T Consensus       195 DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~  274 (293)
T d1csna_         195 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  274 (293)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            9999999999999999999765421  111111    1111112234568899999999999999999999999999998


Q ss_pred             HHHhhcC
Q 029154          143 AFLFTLR  149 (198)
Q Consensus       143 ~~~~~~~  149 (198)
                      +++....
T Consensus       275 ~~~~~~~  281 (293)
T d1csna_         275 KVLERLN  281 (293)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcC
Confidence            8876554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.96  E-value=2.5e-30  Score=198.20  Aligned_cols=138  Identities=18%  Similarity=0.292  Sum_probs=106.2

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.++..+||+|||+++...........+||+.|+|||.+.+       ...++.++|+||+||++|++
T Consensus       151 vHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~~DiwslG~~l~e~  223 (328)
T d3bqca1         151 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD-------YQMYDYSLDMWSLGCMLASM  223 (328)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTT-------CCCCCTHHHHHHHHHHHHHH
T ss_pred             ccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccC-------CCCCCcccchhhhhhhhHHh
Confidence            69999999999997656799999999986655555567789999999999754       34578999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHc------------c------------------------CCCCCCCCCcHHHHHHHHHhc
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFK------------H------------------------ARPGLPEDISPDLAFIVQSCW  124 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~------------~------------------------~~~~~p~~~~~~~~~l~~~~l  124 (198)
                      ++|..||...............            .                        ........+++++.+|+.+||
T Consensus       224 ~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL  303 (328)
T d3bqca1         224 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL  303 (328)
T ss_dssp             HHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHS
T ss_pred             ccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHc
Confidence            9999999765543322111000            0                        000112336889999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhh
Q 029154          125 VEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       125 ~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      ..||.+|||++|+++  |.|+..
T Consensus       304 ~~dP~~R~ta~e~L~--Hp~F~~  324 (328)
T d3bqca1         304 RYDHQSRLTAREAME--HPYFYT  324 (328)
T ss_dssp             CSSGGGSCCHHHHHT--SGGGTT
T ss_pred             cCChhHCcCHHHHhc--CcccCC
Confidence            999999999999998  777654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-30  Score=198.43  Aligned_cols=136  Identities=28%  Similarity=0.439  Sum_probs=104.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcc--cccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETV--TEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLW   78 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~   78 (198)
                      |||||||+|||++.+ +.+||+|||+++....  .....+..|++.|++||.+.+      ....++.++||||+||++|
T Consensus       151 vHrDiKp~Nill~~~-~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~------~~~~~~~ksDIWSlG~iLy  223 (322)
T d1vzoa_         151 IYRDIKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG------GDSGHDKAVDWWSLGVLMY  223 (322)
T ss_dssp             CCCCCCGGGEEECTT-SCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTT------CC---CTHHHHHHHHHHHH
T ss_pred             EeccCCccceeecCC-CCEEEeeccchhhhcccccccccccccccccchhHHhhc------CCcCCCchhhhHHHHHHHH
Confidence            799999999999977 6799999999975432  222344678999999999854      2345788999999999999


Q ss_pred             HHHcCCCCCCCCCcH--HHHHHHHHccCCCCCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHH
Q 029154           79 ELLTNRLPFEGMSNL--QAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRP-----SFSQIIRMLNAFL  145 (198)
Q Consensus        79 e~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~l~~dp~~Rp-----s~~~~l~~l~~~~  145 (198)
                      +|++|..||.+....  ............+..|..+++++.+|+.+||..||.+||     +++|+++  |.|+
T Consensus       224 elltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~--Hpff  295 (322)
T d1vzoa_         224 ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE--HLFF  295 (322)
T ss_dssp             HHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT--SGGG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc--CHhh
Confidence            999999999765421  122222233455667788999999999999999999998     4788887  5554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-29  Score=189.95  Aligned_cols=139  Identities=22%  Similarity=0.318  Sum_probs=104.4

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccc-cccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTE-MMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE   79 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e   79 (198)
                      |||||||+|||++.+ +.+||+|||.++...... ......++..|++||++..       ...++.++||||+||++||
T Consensus       123 vHrDiKP~NIli~~~-~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~-------~~~~~~~~DiwSlG~il~e  194 (292)
T d1unla_         123 LHRDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-------AKLYSTSIDMWSAGCIFAE  194 (292)
T ss_dssp             ECCCCSGGGEEECTT-CCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTT-------CSCCCTHHHHHHHHHHHHH
T ss_pred             eeecccCcccccccC-CceeeeecchhhcccCCCccceeeccccchhhhhHhcc-------CCCCCchhhccccchHHHH
Confidence            699999999999976 679999999998654332 2334567889999998753       3457899999999999999


Q ss_pred             HHcCCCCCCCCCcHHHHHHHHHc--c--------------------------CCCCCCCCCcHHHHHHHHHhcccCCCCC
Q 029154           80 LLTNRLPFEGMSNLQAAYAAAFK--H--------------------------ARPGLPEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        80 ~~~g~~p~~~~~~~~~~~~~~~~--~--------------------------~~~~~p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      |++|+.||...............  .                          .....+..+++.+.+|+.+||+.||.+|
T Consensus       195 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R  274 (292)
T d1unla_         195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR  274 (292)
T ss_dssp             HTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHC
Confidence            99999987655544433322211  0                          0011234568899999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcC
Q 029154          132 PSFSQIIRMLNAFLFTLR  149 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~  149 (198)
                      ||++|+++  |.|+....
T Consensus       275 ~sa~e~L~--Hp~f~~~~  290 (292)
T d1unla_         275 ISAEEALQ--HPYFSDFC  290 (292)
T ss_dssp             CCHHHHTT--SGGGSSCS
T ss_pred             cCHHHHhc--ChhhcCCC
Confidence            99999999  67765433

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.1e-29  Score=191.09  Aligned_cols=139  Identities=28%  Similarity=0.380  Sum_probs=103.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+|++|||++......  ..+..|++.|+|||++.+       ...++.++|+||+||++|+|
T Consensus       143 iHrDiKp~NILi~~~-~~~kl~dfg~a~~~~~~--~~~~~g~~~y~apE~~~~-------~~~~~~~~DiwSlGv~l~~l  212 (348)
T d2gfsa1         143 IHRDLKPSNLAVNED-CELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLN-------WMHYNQTVDIWSVGCIMAEL  212 (348)
T ss_dssp             CCCCCCGGGEEECTT-CCEEECCC----CCTGG--GSSSCHHHHTSCHHHHTT-------CSCCCTTHHHHHHHHHHHHH
T ss_pred             cccccCCcccccccc-ccccccccchhcccCcc--cccccccccccCchhhcC-------CccCCcccchhhhhHHHHHH
Confidence            799999999999977 67999999998754432  345689999999998653       34568899999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHHccCC---------------------CCC--------CCCCcHHHHHHHHHhcccCCCCC
Q 029154           81 LTNRLPFEGMSNLQAAYAAAFKHAR---------------------PGL--------PEDISPDLAFIVQSCWVEDPNLR  131 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~--------p~~~~~~~~~l~~~~l~~dp~~R  131 (198)
                      ++|..||.+................                     ...        ...+++++.+|+.+||..||.+|
T Consensus       213 l~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R  292 (348)
T d2gfsa1         213 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR  292 (348)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhC
Confidence            9999999887654433222111111                     001        13478899999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCC
Q 029154          132 PSFSQIIRMLNAFLFTLRPP  151 (198)
Q Consensus       132 ps~~~~l~~l~~~~~~~~~~  151 (198)
                      ||+.|+++  |.|+.....+
T Consensus       293 ~ta~elL~--Hp~f~~~~~~  310 (348)
T d2gfsa1         293 ITAAQALA--HAYFAQYHDP  310 (348)
T ss_dssp             CCHHHHHT--SGGGTTTCCT
T ss_pred             cCHHHHhc--CHhhCCCCCC
Confidence            99999999  7887765443

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-28  Score=190.71  Aligned_cols=136  Identities=24%  Similarity=0.363  Sum_probs=95.0

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL   80 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~~l~e~   80 (198)
                      |||||||+|||++.+ +.+|++|||+++...........+||+.|+|||++.+        ..++.++||||+||++++|
T Consensus       141 iHrDlKP~Nil~~~~-~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~--------~~~~~~~DiwSlG~~l~el  211 (355)
T d2b1pa1         141 IHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--------MGYKENVDIWSVGCIMGEM  211 (355)
T ss_dssp             CCSCCCGGGEEECTT-CCEEECCCCC---------------CCTTCCHHHHTT--------CCCCTTHHHHHHHHHHHHH
T ss_pred             ccccCCccccccccc-cceeeechhhhhccccccccccccccccccChhhhcC--------CCCCCCcccccccchHHHH
Confidence            799999999999977 6799999999886665555566789999999999854        5788999999999999999


Q ss_pred             HcCCCCCCCCCcHHHHHHHHH---------------------ccCCCC-------------CC------CCCcHHHHHHH
Q 029154           81 LTNRLPFEGMSNLQAAYAAAF---------------------KHARPG-------------LP------EDISPDLAFIV  120 (198)
Q Consensus        81 ~~g~~p~~~~~~~~~~~~~~~---------------------~~~~~~-------------~p------~~~~~~~~~l~  120 (198)
                      ++|+.||.+............                     ......             .+      ...++++.+|+
T Consensus       212 l~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll  291 (355)
T d2b1pa1         212 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL  291 (355)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH
T ss_pred             hhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHH
Confidence            999999987664333221110                     000000             00      01356789999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHHHhh
Q 029154          121 QSCWVEDPNLRPSFSQIIRMLNAFLFT  147 (198)
Q Consensus       121 ~~~l~~dp~~Rps~~~~l~~l~~~~~~  147 (198)
                      .+||..||++|||++|+++  |.|+..
T Consensus       292 ~~mL~~dP~~R~ta~elL~--Hpw~~~  316 (355)
T d2b1pa1         292 SKMLVIDPAKRISVDDALQ--HPYINV  316 (355)
T ss_dssp             HHHSCSSTTTSCCHHHHHT--STTTGG
T ss_pred             HHHCcCChhHCcCHHHHhc--CcccCC
Confidence            9999999999999999999  777764

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=2.8e-27  Score=183.14  Aligned_cols=134  Identities=19%  Similarity=0.268  Sum_probs=96.2

Q ss_pred             CCCCCCCCCeEEcCCCC-----ceEEecccCcccCcccccccCCCCccceecccccccccccccccCCCCchhhHHHHHH
Q 029154            1 MGKFMKEDNLLLTPDQK-----SLKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGI   75 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~-----~~kl~DfGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Dvws~G~   75 (198)
                      |||||||+|||++.++.     .++++|||.+......  ....+||+.|+|||++..        ..++.++|+||+||
T Consensus       148 vHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~  217 (362)
T d1q8ya_         148 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLG--------APWGCGADIWSTAC  217 (362)
T ss_dssp             ECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHT--------CCCCTHHHHHHHHH
T ss_pred             ccccCChhHeeeeccCcccccceeeEeecccccccccc--cccccccccccChhhccc--------cCCCccccccchHH
Confidence            69999999999985532     3899999998754432  345689999999998853        56899999999999


Q ss_pred             HHHHHHcCCCCCCCCCcHH-----HHHHH---HHcc-----------------------C---------------CCCCC
Q 029154           76 VLWELLTNRLPFEGMSNLQ-----AAYAA---AFKH-----------------------A---------------RPGLP  109 (198)
Q Consensus        76 ~l~e~~~g~~p~~~~~~~~-----~~~~~---~~~~-----------------------~---------------~~~~p  109 (198)
                      ++++|++|+.||.......     .....   ....                       .               ....+
T Consensus       218 il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (362)
T d1q8ya_         218 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS  297 (362)
T ss_dssp             HHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC
T ss_pred             HHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccC
Confidence            9999999999996533211     00000   0000                       0               00111


Q ss_pred             CCCcHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 029154          110 EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF  146 (198)
Q Consensus       110 ~~~~~~~~~l~~~~l~~dp~~Rps~~~~l~~l~~~~~  146 (198)
                      ...++++.+|+.+||..||.+|||++|+++  |.|+.
T Consensus       298 ~~~~~~~~dll~~mL~~dP~~Rpta~e~L~--Hp~f~  332 (362)
T d1q8ya_         298 KDEAKEISDFLSPMLQLDPRKRADAGGLVN--HPWLK  332 (362)
T ss_dssp             HHHHHHHHHHHGGGGCSSTTTCBCHHHHHT--CGGGT
T ss_pred             cccCHHHHHHHHHHCCCChhHCcCHHHHhc--CcccC
Confidence            223577899999999999999999999998  77776

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.57  E-value=9.6e-09  Score=71.18  Aligned_cols=28  Identities=18%  Similarity=0.270  Sum_probs=24.1

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcccC
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAREE   30 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~~~   30 (198)
                      |||||||+|||++.+  .++|+|||.++..
T Consensus       125 iHrDiKP~NILv~~~--~~~liDFG~a~~~  152 (191)
T d1zara2         125 VHGDLSQYNVLVSEE--GIWIIDFPQSVEV  152 (191)
T ss_dssp             ECSCCSTTSEEEETT--EEEECCCTTCEET
T ss_pred             EEccCChhheeeeCC--CEEEEECCCcccC
Confidence            699999999999954  4999999998654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.68  E-value=0.0048  Score=44.81  Aligned_cols=27  Identities=26%  Similarity=0.279  Sum_probs=22.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+.++||+++.+ ...-|.||+.+.
T Consensus       186 IHgDl~~dNvl~~~~-~v~gvIDF~~~~  212 (316)
T d2ppqa1         186 IHADLFQDNVFFLGD-ELSGLIDFYFAC  212 (316)
T ss_dssp             ECSCCCGGGEEEETT-EEEEECCCTTCE
T ss_pred             ccCCcchhhhhcccc-cceeEecccccc
Confidence            799999999999965 445799999763

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.28  E-value=0.0069  Score=42.30  Aligned_cols=26  Identities=12%  Similarity=0.011  Sum_probs=21.8

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLA   27 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla   27 (198)
                      ||+|+.|.|||++.+ ..+-|+||+.+
T Consensus       178 iHgD~~~~Nvl~~~~-~~~~iID~~~~  203 (255)
T d1nd4a_         178 THGDACLPNIMVENG-RFSGFIDCGRL  203 (255)
T ss_dssp             ECSSCCGGGEEEETT-EEEEECCCTTC
T ss_pred             EeCCCCCcceEEeCC-ceEEEEEchhc
Confidence            699999999999854 45679999865

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.11  E-value=0.011  Score=41.42  Aligned_cols=27  Identities=15%  Similarity=0.222  Sum_probs=21.9

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.|.|||++.+ +.+-|.||+.+.
T Consensus       186 ~HgD~~~~Nil~~~~-~~~~lIDwe~a~  212 (263)
T d1j7la_         186 SHGDLGDSNIFVKDG-KVSGFIDLGRSG  212 (263)
T ss_dssp             ECSCCCTTSEEEETT-EEEEECCCTTCE
T ss_pred             EEeeccCcceeecCC-ceEEEeechhcc
Confidence            599999999999854 445699998763

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=92.65  E-value=0.022  Score=42.71  Aligned_cols=26  Identities=12%  Similarity=0.120  Sum_probs=22.5

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      +|+|+.+.|||++.+  .++|+||..+.
T Consensus       226 iHGDl~~gNIlv~~~--~~~vID~E~a~  251 (392)
T d2pula1         226 IHGDLHTGSIFASEH--ETKVIDPEFAF  251 (392)
T ss_dssp             ECSCCCGGGEEECSS--CEEECCCTTCE
T ss_pred             eccCCcCCceeEcCC--ceEEechhhcc
Confidence            699999999999855  48999998775

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=92.37  E-value=0.03  Score=40.72  Aligned_cols=25  Identities=24%  Similarity=0.231  Sum_probs=20.6

Q ss_pred             CCCCCCCCCeEEcCCCCceEEecccCcc
Q 029154            1 MGKFMKEDNLLLTPDQKSLKLADFGLAR   28 (198)
Q Consensus         1 iH~dlKp~NIll~~~~~~~kl~DfGla~   28 (198)
                      ||+|+.+.|||++ + + ..+.||+-+.
T Consensus       195 iHgDlh~~NvL~~-~-~-~~~IDFdd~~  219 (325)
T d1zyla1         195 LHGDCHAGNILWR-D-G-PMFVDLDDAR  219 (325)
T ss_dssp             CCSSCSGGGEEES-S-S-EEECCCTTCC
T ss_pred             ecCCCCcccEEEe-C-C-ceEEechhcc
Confidence            7999999999997 3 3 4589998764

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=81.89  E-value=0.29  Score=36.24  Aligned_cols=13  Identities=31%  Similarity=0.437  Sum_probs=11.8

Q ss_pred             CCCCCCCCeEEcC
Q 029154            2 GKFMKEDNLLLTP   14 (198)
Q Consensus         2 H~dlKp~NIll~~   14 (198)
                      |.|+.+.|||+..
T Consensus       222 HnDL~~~NiL~~~  234 (395)
T d1nw1a_         222 HNDLQEGNILLPK  234 (395)
T ss_dssp             CSCCCGGGEEEEC
T ss_pred             ecCCCcccEeecc
Confidence            9999999999854