Your job contains 1 sequence.
>029156
MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI
KFAEEVLTSFSLIVTLFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029156
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2147770 - symbol:AT5G58030 "AT5G58030" species... 915 8.1e-92 1
DICTYBASE|DDB_G0278643 - symbol:trappc5 "trafficking prot... 579 3.3e-56 1
POMBASE|SPBC1718.05 - symbol:trs31 "TRAPP complex subunit... 445 5.2e-42 1
UNIPROTKB|Q5F359 - symbol:TRAPPC5 "Trafficking protein pa... 421 1.8e-39 1
UNIPROTKB|F1MSD6 - symbol:TRAPPC5 "Trafficking protein pa... 420 2.3e-39 1
UNIPROTKB|Q8IUR0 - symbol:TRAPPC5 "Trafficking protein pa... 420 2.3e-39 1
UNIPROTKB|F1SCJ1 - symbol:TRAPPC5 "Uncharacterized protei... 420 2.3e-39 1
UNIPROTKB|Q2NL13 - symbol:TRAPPC5 "Trafficking protein pa... 419 2.9e-39 1
ZFIN|ZDB-GENE-040718-185 - symbol:trappc5 "trafficking pr... 419 2.9e-39 1
UNIPROTKB|E2RBU4 - symbol:TRAPPC5 "Uncharacterized protei... 417 4.8e-39 1
MGI|MGI:1913932 - symbol:Trappc5 "trafficking protein par... 417 4.8e-39 1
RGD|1563971 - symbol:Trappc5 "trafficking protein particl... 417 4.8e-39 1
UNIPROTKB|G4NEY8 - symbol:MGG_00708 "Trafficking protein ... 396 8.0e-37 1
WB|WBGene00013259 - symbol:Y57A10A.16 species:6239 "Caeno... 396 8.0e-37 1
UNIPROTKB|Q9NA81 - symbol:Y57A10A.16 "Protein Y57A10A.16"... 396 8.0e-37 1
CGD|CAL0000823 - symbol:orf19.7615 species:5476 "Candida ... 393 1.7e-36 1
UNIPROTKB|Q5ACM7 - symbol:TRS31 "Putative uncharacterized... 393 1.7e-36 1
GENEDB_PFALCIPARUM|PF14_0358 - symbol:PF14_0358 "41-2 pro... 336 1.8e-30 1
UNIPROTKB|Q7KQM2 - symbol:PF14_0358 "Trafficking protein ... 336 1.8e-30 1
SGD|S000002880 - symbol:TRS31 "Subunit of the transport p... 218 1.4e-27 2
CGD|CAL0002339 - symbol:TRS33 species:5476 "Candida albic... 137 2.1e-08 1
SGD|S000005641 - symbol:TRS33 "Subunit of the transport p... 122 8.5e-06 1
UNIPROTKB|Q32L78 - symbol:TRAPPC6B "Trafficking protein p... 110 1.9e-05 1
UNIPROTKB|Q86SZ2 - symbol:TRAPPC6B "Trafficking protein p... 110 1.9e-05 1
MGI|MGI:1925482 - symbol:Trappc6b "trafficking protein pa... 109 3.1e-05 1
UNIPROTKB|Q3T086 - symbol:TRAPPC6A "Trafficking protein p... 102 0.00041 1
ASPGD|ASPL0000004639 - symbol:AN10826 species:162425 "Eme... 103 0.00073 1
>TAIR|locus:2147770 [details] [associations]
symbol:AT5G58030 "AT5G58030" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0030244 "cellulose
biosynthetic process" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] Pfam:PF04051 EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 EMBL:AB024029 eggNOG:COG5128 HOGENOM:HOG000176758
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY
UniGene:At.23616 UniGene:At.28128 EMBL:AY086712 EMBL:BT004803
EMBL:AK227834 IPI:IPI00517877 RefSeq:NP_200611.1
ProteinModelPortal:Q9FGU1 SMR:Q9FGU1 IntAct:Q9FGU1 STRING:Q9FGU1
PaxDb:Q9FGU1 PRIDE:Q9FGU1 DNASU:835915 EnsemblPlants:AT5G58030.1
GeneID:835915 KEGG:ath:AT5G58030 TAIR:At5g58030 InParanoid:Q9FGU1
PhylomeDB:Q9FGU1 ProtClustDB:CLSN2687586 Genevestigator:Q9FGU1
Uniprot:Q9FGU1
Length = 195
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 178/187 (95%), Positives = 187/187 (100%)
Query: 1 MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
MIGVGK+KQYSNVLDKPLSKGKQEVSL+AFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1 MIGVGKMKQYSNVLDKPLSKGKQEVSLTAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
Query: 61 AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120
AVG+RVLELLC+R+KGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61 AVGSRVLELLCNREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120
Query: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI 180
KELLVNRFISIPKDMGTFNCGAFVAGIV+GVLD+AGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPIEGQQRPRTTILI 180
Query: 181 KFAEEVL 187
KFA+EVL
Sbjct: 181 KFADEVL 187
>DICTYBASE|DDB_G0278643 [details] [associations]
symbol:trappc5 "trafficking protein particle complex
subunit 5" species:44689 "Dictyostelium discoideum" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0278643
Pfam:PF04051 GO:GO:0005783 GO:GO:0005794 GO:GO:0016192
GenomeReviews:CM000152_GR EMBL:AAFI02000023 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 eggNOG:COG5128
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479
RefSeq:XP_642237.1 ProteinModelPortal:Q54YG5 STRING:Q54YG5
EnsemblProtists:DDB0218079 GeneID:8621446 KEGG:ddi:DDB_G0278643
OMA:WHKGTTY ProtClustDB:PTZ00391 Uniprot:Q54YG5
Length = 186
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 108/176 (61%), Positives = 144/176 (81%)
Query: 12 NVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLC 71
N++D+PLSKGK E+++S+FAFLFSE++QY Q ++ ELE++L D GY++G R+LELLC
Sbjct: 7 NIVDRPLSKGKGEINISSFAFLFSEMIQYCQDRIKAGHELEKKLSDMGYSIGPRLLELLC 66
Query: 72 HRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISI 131
R+K ++RET+LLGILSF+H+TVWK LFGK ADSLEK TE +DEYMIS+ ++VN+FIS+
Sbjct: 67 VREKNSKRETKLLGILSFIHTTVWKSLFGKPADSLEKSTEADDEYMISDNNMVVNKFISL 126
Query: 132 PKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
PK + + NC AFVAGI+ G+L SA FPA VTAH V VEG++ P+T ILIKF EV+
Sbjct: 127 PKHLSSLNCAAFVAGIIEGILCSAEFPARVTAHNVAVEGKRFPKTVILIKFNPEVI 182
>POMBASE|SPBC1718.05 [details] [associations]
symbol:trs31 "TRAPP complex subunit Trs31 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0030008 "TRAPP complex" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IC]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISO] PomBase:SPBC1718.05 Pfam:PF04051 GO:GO:0005783
GO:GO:0005829 GO:GO:0005635 GO:GO:0006886 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0032313 GO:GO:0030008
InterPro:IPR024096 InterPro:IPR007194 SUPFAM:SSF111126
eggNOG:COG5128 HOGENOM:HOG000176758 InterPro:IPR016696
PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY PIR:T50333
RefSeq:NP_596451.1 ProteinModelPortal:Q9P7N9 STRING:Q9P7N9
EnsemblFungi:SPBC1718.05.1 GeneID:2540014 KEGG:spo:SPBC1718.05
OrthoDB:EOG47WRZ1 NextBio:20801157 Uniprot:Q9P7N9
Length = 209
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 90/177 (50%), Positives = 125/177 (70%)
Query: 12 NVLDKPLSKGKQ-EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
+V ++ L+K + +V+LS+FAF+FSEL+Q Q+QV I E E +L + GY VG +++EL+
Sbjct: 27 SVYEQNLNKIRNSDVNLSSFAFIFSELIQRIQSQVSGIQEFEEKLNEHGYRVGQKLVELV 86
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R++ +RETR+LGIL ++HS+VWK LFGK ADSLEK E DEYMI + L+N+FIS
Sbjct: 87 VWRERNPKRETRILGILQYIHSSVWKYLFGKHADSLEKSKEASDEYMIVDNNPLLNKFIS 146
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+M NC A++AGI+ G LDSA FP +AH VP+ Q RT ILIK V+
Sbjct: 147 VPKEMNQLNCCAYLAGIIEGFLDSAQFPCKASAHSVPLS-QYPYRTVILIKLDPSVI 202
>UNIPROTKB|Q5F359 [details] [associations]
symbol:TRAPPC5 "Trafficking protein particle complex
subunit 5" species:9031 "Gallus gallus" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] Pfam:PF04051 GO:GO:0005783 GO:GO:0005794
GO:GO:0016192 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 CTD:126003 HOVERGEN:HBG055535 InterPro:IPR016696
PANTHER:PTHR20902 PIRSF:PIRSF017479 EMBL:AJ851791 IPI:IPI00597878
RefSeq:NP_001258088.1 UniGene:Gga.34043 UniGene:Gga.43181
ProteinModelPortal:Q5F359 SMR:Q5F359 GeneID:100858483
KEGG:gga:100858483 Uniprot:Q5F359
Length = 188
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++PL + + EVSLSAFA LF ELVQY Q +V ++AEL+ +L G+ VG R+L+ L
Sbjct: 10 SPLLERPLGRPRGEVSLSAFALLFCELVQYCQRRVYSVAELQSKLAQLGHQVGLRLLDPL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R++G RRET++L +L FV VW+ LFGK AD LE+ + + Y + E+E LVN FIS
Sbjct: 70 VSRERGGRRETKVLSVLLFVKGPVWRALFGKEADKLEQANDDDKTYYVIEREPLVNTFIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+P++ T NC AF AG+V VL ++GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPRENSTLNCAAFTAGLVEAVLGASGFPAKVTAHWH--KG-----TTLMIKFEEGVI 179
>UNIPROTKB|F1MSD6 [details] [associations]
symbol:TRAPPC5 "Trafficking protein particle complex
subunit 5" species:9913 "Bos taurus" [GO:0030008 "TRAPP complex"
evidence=IEA] Pfam:PF04051 GO:GO:0030008 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 IPI:IPI00695946
UniGene:Bt.57991 InterPro:IPR016696 PANTHER:PTHR20902
PIRSF:PIRSF017479 OMA:WHKGTTY GeneTree:ENSGT00390000000976
EMBL:DAAA02019502 Ensembl:ENSBTAT00000005590 Uniprot:F1MSD6
Length = 188
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 91/177 (51%), Positives = 122/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L
Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS
Sbjct: 70 VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC +F AGIV VL +GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH--KG-----TTLMIKFEEAVI 179
>UNIPROTKB|Q8IUR0 [details] [associations]
symbol:TRAPPC5 "Trafficking protein particle complex
subunit 5" species:9606 "Homo sapiens" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] Pfam:PF04051 GO:GO:0005783 GO:GO:0016192
EMBL:CH471139 GO:GO:0030008 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 CTD:126003 eggNOG:COG5128 HOGENOM:HOG000176758
HOVERGEN:HBG055535 OrthoDB:EOG4C2HBP InterPro:IPR016696
PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY EMBL:AK292001
EMBL:BC042161 IPI:IPI00177509 RefSeq:NP_001035926.1
RefSeq:NP_001035927.1 RefSeq:NP_777554.1 UniGene:Hs.432413
ProteinModelPortal:Q8IUR0 SMR:Q8IUR0 IntAct:Q8IUR0 STRING:Q8IUR0
PhosphoSite:Q8IUR0 DMDM:71153352 PaxDb:Q8IUR0 PeptideAtlas:Q8IUR0
PRIDE:Q8IUR0 DNASU:126003 Ensembl:ENST00000317378
Ensembl:ENST00000426877 GeneID:126003 KEGG:hsa:126003
UCSC:uc002mhi.1 GeneCards:GC19P007745 HGNC:HGNC:23067 HPA:HPA049064
neXtProt:NX_Q8IUR0 PharmGKB:PA134875218 InParanoid:Q8IUR0
GenomeRNAi:126003 NextBio:81619 Bgee:Q8IUR0 CleanEx:HS_TRAPPC5
Genevestigator:Q8IUR0 GermOnline:ENSG00000181029 Uniprot:Q8IUR0
Length = 188
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 91/177 (51%), Positives = 122/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L
Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDAL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS
Sbjct: 70 VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC +F AGIV VL +GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH--KG-----TTLMIKFEEAVI 179
>UNIPROTKB|F1SCJ1 [details] [associations]
symbol:TRAPPC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030008 "TRAPP complex" evidence=IEA] Pfam:PF04051
GO:GO:0030008 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 InterPro:IPR016696 PANTHER:PTHR20902
PIRSF:PIRSF017479 OMA:WHKGTTY GeneTree:ENSGT00390000000976
EMBL:CU929919 RefSeq:XP_003123195.1 RefSeq:XP_003123196.1
RefSeq:XP_003123197.1 Ensembl:ENSSSCT00000014825 GeneID:100524729
KEGG:ssc:100524729 Uniprot:F1SCJ1
Length = 188
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 91/177 (51%), Positives = 122/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L
Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS
Sbjct: 70 VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC +F AGIV VL +GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH--KG-----TTLMIKFEEAVI 179
>UNIPROTKB|Q2NL13 [details] [associations]
symbol:TRAPPC5 "Trafficking protein particle complex
subunit 5" species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] Pfam:PF04051
GO:GO:0005783 GO:GO:0005794 GO:GO:0016192 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 EMBL:BC111232 IPI:IPI00695946
RefSeq:NP_001071317.1 UniGene:Bt.57991 ProteinModelPortal:Q2NL13
SMR:Q2NL13 STRING:Q2NL13 PRIDE:Q2NL13 GeneID:504874 KEGG:bta:504874
CTD:126003 eggNOG:COG5128 HOGENOM:HOG000176758 HOVERGEN:HBG055535
InParanoid:Q2NL13 OrthoDB:EOG4C2HBP NextBio:20866876
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479
Uniprot:Q2NL13
Length = 188
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 91/177 (51%), Positives = 121/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V +AEL+ RL G VGARVL+ L
Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFTVAELQARLAALGRQVGARVLDAL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS
Sbjct: 70 VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC +F AGIV VL +GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH--KG-----TTLMIKFEEAVI 179
>ZFIN|ZDB-GENE-040718-185 [details] [associations]
symbol:trappc5 "trafficking protein particle
complex 5" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] Pfam:PF04051
ZFIN:ZDB-GENE-040718-185 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 EMBL:BX511120 PDB:2J3R PDB:2J3W PDBsum:2J3R
PDBsum:2J3W CTD:126003 eggNOG:COG5128 HOGENOM:HOG000176758
HOVERGEN:HBG055535 OrthoDB:EOG4C2HBP InterPro:IPR016696
PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY
GeneTree:ENSGT00390000000976 EMBL:BC076327 IPI:IPI00494045
RefSeq:NP_001002482.1 UniGene:Dr.76532 SMR:Q6DGL5 STRING:Q6DGL5
Ensembl:ENSDART00000038574 Ensembl:ENSDART00000141144
Ensembl:ENSDART00000149565 GeneID:436755 KEGG:dre:436755
InParanoid:Q6DGL5 EvolutionaryTrace:Q6DGL5 NextBio:20831192
Uniprot:Q6DGL5
Length = 188
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 86/177 (48%), Positives = 121/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L++ K EVS+SAFA LFSE+VQY Q++V +++EL+ RL D G VGA +L++L
Sbjct: 10 SAILERSLTRPKTEVSVSAFALLFSEMVQYCQSRVYSVSELQARLADMGQGVGASLLDVL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+K +RET++L IL F+ VWK LFGK AD LE+ + + Y I EKE L+N +IS
Sbjct: 70 VMREKNGKRETKVLNILLFIKVNVWKALFGKEADKLEQANDDDKTYYIIEKEPLINAYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC AF GIV +L +GFPA VT H+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCAAFTGGIVEAILTHSGFPAKVTVHWH--KG-----TTLMIKFDESVI 179
>UNIPROTKB|E2RBU4 [details] [associations]
symbol:TRAPPC5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030008 "TRAPP complex" evidence=IEA]
Pfam:PF04051 GO:GO:0030008 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 CTD:126003 InterPro:IPR016696 PANTHER:PTHR20902
PIRSF:PIRSF017479 OMA:WHKGTTY GeneTree:ENSGT00390000000976
EMBL:AAEX03012460 RefSeq:XP_003432839.1 RefSeq:XP_003432840.1
RefSeq:XP_542115.2 Ensembl:ENSCAFT00000037435 GeneID:484997
KEGG:cfa:484997 NextBio:20859061 Uniprot:E2RBU4
Length = 188
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 91/177 (51%), Positives = 121/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L
Sbjct: 10 SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS
Sbjct: 70 VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINAYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC +F AGIV VL +GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH--KG-----TTLMIKFEEAVI 179
>MGI|MGI:1913932 [details] [associations]
symbol:Trappc5 "trafficking protein particle complex 5"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030008
"TRAPP complex" evidence=IDA] MGI:MGI:1913932 Pfam:PF04051
GO:GO:0005783 GO:GO:0016192 GO:GO:0030008 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 CTD:126003 eggNOG:COG5128
HOGENOM:HOG000176758 HOVERGEN:HBG055535 OrthoDB:EOG4C2HBP
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY
EMBL:AK003633 EMBL:AK007989 EMBL:AK076212 EMBL:AK078451
EMBL:BC049179 IPI:IPI00132322 RefSeq:NP_079977.3 UniGene:Mm.29090
ProteinModelPortal:Q9CQA1 SMR:Q9CQA1 IntAct:Q9CQA1 STRING:Q9CQA1
PhosphoSite:Q9CQA1 PaxDb:Q9CQA1 PRIDE:Q9CQA1
Ensembl:ENSMUST00000044857 GeneID:66682 KEGG:mmu:66682
UCSC:uc009ksk.2 GeneTree:ENSGT00390000000976 InParanoid:Q9CQA1
NextBio:322365 Bgee:Q9CQA1 CleanEx:MM_TRAPPC5 Genevestigator:Q9CQA1
GermOnline:ENSMUSG00000040236 Uniprot:Q9CQA1
Length = 188
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 91/177 (51%), Positives = 121/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L
Sbjct: 10 SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS
Sbjct: 70 VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC +F AGIV VL +GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH--KG-----TTLMIKFEEAVI 179
>RGD|1563971 [details] [associations]
symbol:Trappc5 "trafficking protein particle complex 5"
species:10116 "Rattus norvegicus" [GO:0030008 "TRAPP complex"
evidence=IEA;ISO] RGD:1563971 Pfam:PF04051 GO:GO:0030008
InterPro:IPR024096 InterPro:IPR007194 SUPFAM:SSF111126 CTD:126003
eggNOG:COG5128 HOGENOM:HOG000176758 HOVERGEN:HBG055535
OrthoDB:EOG4C2HBP InterPro:IPR016696 PANTHER:PTHR20902
PIRSF:PIRSF017479 OMA:WHKGTTY GeneTree:ENSGT00390000000976
EMBL:BC158788 EMBL:CH474084 IPI:IPI00766427 RefSeq:NP_001102320.1
UniGene:Rn.162083 SMR:B0BNE3 STRING:B0BNE3
Ensembl:ENSRNOT00000001327 GeneID:363858 KEGG:rno:363858
UCSC:RGD:1563971 NextBio:684361 Genevestigator:B0BNE3
Uniprot:B0BNE3
Length = 188
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 91/177 (51%), Positives = 121/177 (68%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S +L++ L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L
Sbjct: 10 SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS
Sbjct: 70 VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+PK+ T NC +F AGIV VL +GFPA VTAH+ +G TT++IKF E V+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH--KG-----TTLMIKFEEAVI 179
>UNIPROTKB|G4NEY8 [details] [associations]
symbol:MGG_00708 "Trafficking protein particle complex
subunit 5" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0030008 "TRAPP complex" evidence=ISS]
Pfam:PF04051 GO:GO:0005783 GO:GO:0005829 GO:GO:0005635
GO:GO:0006886 EMBL:CM001235 GO:GO:0006888 GO:GO:0030008
InterPro:IPR024096 InterPro:IPR007194 SUPFAM:SSF111126
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479
RefSeq:XP_003718298.1 ProteinModelPortal:G4NEY8
EnsemblFungi:MGG_00708T0 GeneID:2675122 KEGG:mgr:MGG_00708
Uniprot:G4NEY8
Length = 216
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 81/183 (44%), Positives = 120/183 (65%)
Query: 13 VLDKPLSKGKQ-EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLC 71
+ +PL++ + E+S +AFA+LFSE+V Y Q +V I +LE+RL G+ +G ++L+LL
Sbjct: 25 IYHRPLNRSRTGELSQAAFAYLFSEMVTYAQRRVTGIQDLEKRLNVQGHPIGVKLLDLLL 84
Query: 72 HRD--KGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHE--DEYMISEKELLVNR 127
HR+ K +R ++ +L F+ VW LFG+ AD LEK ++ DEYMI + E LVN
Sbjct: 85 HREPAKSQQRPLNIIALLHFIKINVWTHLFGRQADRLEKSSDSTKPDEYMIIDNEPLVNA 144
Query: 128 FISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFV--PVEGQQRP-RTTILIKFAE 184
++S+P++M NC AF AG++ GV D A FPA VTAH + P EG+ P +T L+KFA
Sbjct: 145 YVSVPREMSQLNCAAFAAGVIEGVCDGAAFPARVTAHTMGKPDEGEMWPGKTVFLVKFAP 204
Query: 185 EVL 187
EV+
Sbjct: 205 EVV 207
>WB|WBGene00013259 [details] [associations]
symbol:Y57A10A.16 species:6239 "Caenorhabditis elegans"
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF04051
GO:GO:0005886 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 EMBL:AL117195 eggNOG:COG5128 HOGENOM:HOG000176758
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY
GeneTree:ENSGT00390000000976 PIR:T31636 RefSeq:NP_496593.1
ProteinModelPortal:Q9NA81 SMR:Q9NA81 IntAct:Q9NA81 STRING:Q9NA81
EnsemblMetazoa:Y57A10A.16 GeneID:190338 KEGG:cel:CELE_Y57A10A.16
UCSC:Y57A10A.16 CTD:190338 WormBase:Y57A10A.16 InParanoid:Q9NA81
NextBio:945440 Uniprot:Q9NA81
Length = 185
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 73/155 (47%), Positives = 107/155 (69%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
+ +LDK LS+GK E++LS FA LFSE+V Y Q + + + ++ ++ G VG R+ +++
Sbjct: 5 TGILDKSLSRGKTEINLSTFAVLFSEMVLYAQNRSETVTDIHDKIASYGKQVGLRMFDII 64
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG +RET+LLG+L F+ STVWK LFGK AD LE+ + Y++ EK+ +VN +IS
Sbjct: 65 TLREKGYKRETKLLGMLMFIKSTVWKNLFGKEADKLERSNDDHCTYLLIEKDPMVNTYIS 124
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHF 165
+P+D G NC AF AGIV +L+SA F VTAH+
Sbjct: 125 VPRDKGVLNCAAFAAGIVEAILESASFKCKVTAHW 159
>UNIPROTKB|Q9NA81 [details] [associations]
symbol:Y57A10A.16 "Protein Y57A10A.16" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF04051 GO:GO:0005886 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 EMBL:AL117195 eggNOG:COG5128
HOGENOM:HOG000176758 InterPro:IPR016696 PANTHER:PTHR20902
PIRSF:PIRSF017479 OMA:WHKGTTY GeneTree:ENSGT00390000000976
PIR:T31636 RefSeq:NP_496593.1 ProteinModelPortal:Q9NA81 SMR:Q9NA81
IntAct:Q9NA81 STRING:Q9NA81 EnsemblMetazoa:Y57A10A.16 GeneID:190338
KEGG:cel:CELE_Y57A10A.16 UCSC:Y57A10A.16 CTD:190338
WormBase:Y57A10A.16 InParanoid:Q9NA81 NextBio:945440 Uniprot:Q9NA81
Length = 185
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 73/155 (47%), Positives = 107/155 (69%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
+ +LDK LS+GK E++LS FA LFSE+V Y Q + + + ++ ++ G VG R+ +++
Sbjct: 5 TGILDKSLSRGKTEINLSTFAVLFSEMVLYAQNRSETVTDIHDKIASYGKQVGLRMFDII 64
Query: 71 CHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
R+KG +RET+LLG+L F+ STVWK LFGK AD LE+ + Y++ EK+ +VN +IS
Sbjct: 65 TLREKGYKRETKLLGMLMFIKSTVWKNLFGKEADKLERSNDDHCTYLLIEKDPMVNTYIS 124
Query: 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHF 165
+P+D G NC AF AGIV +L+SA F VTAH+
Sbjct: 125 VPRDKGVLNCAAFAAGIVEAILESASFKCKVTAHW 159
>CGD|CAL0000823 [details] [associations]
symbol:orf19.7615 species:5476 "Candida albicans" [GO:0017112
"Rab guanyl-nucleotide exchange factor activity" evidence=IGI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IGI]
[GO:0030008 "TRAPP complex" evidence=IGI] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
CGD:CAL0000823 Pfam:PF04051 GO:GO:0006888 EMBL:AACQ01000032
GO:GO:0030008 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 eggNOG:COG5128 HOGENOM:HOG000176758
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479
RefSeq:XP_719376.1 ProteinModelPortal:Q5ACM7 STRING:Q5ACM7
GeneID:3638954 KEGG:cal:CaO19.7615 Uniprot:Q5ACM7
Length = 248
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/177 (46%), Positives = 112/177 (63%)
Query: 18 LSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRD--K 75
++K E++LS+ +FLF E++ + + I +LE RL GY +G R LEL R+ K
Sbjct: 70 ITKKPHEINLSSLSFLFCEIISWAHSNSKGIQDLENRLNGLGYQIGQRYLELCKIREGFK 129
Query: 76 GNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDM 135
++RE RLL +L F+H WK++FGK A+ LEK + +EYMI E L+NRFISIPK+
Sbjct: 130 NSKREIRLLEMLQFIHGPFWKLIFGKTANELEKSQDLPNEYMIVENVPLLNRFISIPKEY 189
Query: 136 GTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLTSFSL 192
G NC AFVAGI+ G LD++GF A VTAH V + RT LIKF + VL SL
Sbjct: 190 GDLNCSAFVAGIIEGALDNSGFNADVTAHTVATDANPL-RTVFLIKFDDSVLIRESL 245
>UNIPROTKB|Q5ACM7 [details] [associations]
symbol:TRS31 "Putative uncharacterized protein TRS31"
species:237561 "Candida albicans SC5314" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IGI] [GO:0030008 "TRAPP
complex" evidence=IGI] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IGI] CGD:CAL0000823 Pfam:PF04051
GO:GO:0006888 EMBL:AACQ01000032 GO:GO:0030008 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 eggNOG:COG5128
HOGENOM:HOG000176758 InterPro:IPR016696 PANTHER:PTHR20902
PIRSF:PIRSF017479 RefSeq:XP_719376.1 ProteinModelPortal:Q5ACM7
STRING:Q5ACM7 GeneID:3638954 KEGG:cal:CaO19.7615 Uniprot:Q5ACM7
Length = 248
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/177 (46%), Positives = 112/177 (63%)
Query: 18 LSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRD--K 75
++K E++LS+ +FLF E++ + + I +LE RL GY +G R LEL R+ K
Sbjct: 70 ITKKPHEINLSSLSFLFCEIISWAHSNSKGIQDLENRLNGLGYQIGQRYLELCKIREGFK 129
Query: 76 GNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDM 135
++RE RLL +L F+H WK++FGK A+ LEK + +EYMI E L+NRFISIPK+
Sbjct: 130 NSKREIRLLEMLQFIHGPFWKLIFGKTANELEKSQDLPNEYMIVENVPLLNRFISIPKEY 189
Query: 136 GTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLTSFSL 192
G NC AFVAGI+ G LD++GF A VTAH V + RT LIKF + VL SL
Sbjct: 190 GDLNCSAFVAGIIEGALDNSGFNADVTAHTVATDANPL-RTVFLIKFDDSVLIRESL 245
>GENEDB_PFALCIPARUM|PF14_0358 [details] [associations]
symbol:PF14_0358 "41-2 protein antigen
precursor" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020002 "host cell plasma membrane" evidence=TAS]
Pfam:PF04051 GO:GO:0005783 GO:GO:0005794 GO:GO:0016020
GO:GO:0016192 GO:GO:0020002 EMBL:AE014187 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 HOGENOM:HOG000176758
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY
ProtClustDB:PTZ00391 RefSeq:XP_001348532.1
ProteinModelPortal:Q7KQM2 EnsemblProtists:PF14_0358:mRNA
GeneID:811940 KEGG:pfa:PF14_0358 EuPathDB:PlasmoDB:PF3D7_1437800
Uniprot:Q7KQM2
Length = 184
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 77/174 (44%), Positives = 108/174 (62%)
Query: 14 LDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHR 73
++K L++ KQ+VSLSAF+ LFSE+VQY + +E L + G VG ++ E L ++
Sbjct: 8 IEKELNRIKQDVSLSAFSILFSEMVQYCLYKSKRGYRIEDCLHEMGLRVGYKLNEYLTYK 67
Query: 74 DKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPK 133
+K +R ++ IL+F+ VWK LF +D L K + EYMI +K +L+N+FI++PK
Sbjct: 68 NKV-KRSINIINILTFISKHVWKYLFQHSSDLL-KSQDSIYEYMICDKNILLNKFINVPK 125
Query: 134 DMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
D G NC AF AGIV G L S+ F A VTAH + EG TTI IKF EV+
Sbjct: 126 DYGNINCAAFAAGIVEGFLCSSEFQADVTAHTIH-EGDDNYNTTIFIKFYPEVV 178
>UNIPROTKB|Q7KQM2 [details] [associations]
symbol:PF14_0358 "Trafficking protein particle complex
subunit 5" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020002 "host cell plasma membrane" evidence=TAS]
Pfam:PF04051 GO:GO:0005783 GO:GO:0005794 GO:GO:0016020
GO:GO:0016192 GO:GO:0020002 EMBL:AE014187 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 HOGENOM:HOG000176758
InterPro:IPR016696 PANTHER:PTHR20902 PIRSF:PIRSF017479 OMA:WHKGTTY
ProtClustDB:PTZ00391 RefSeq:XP_001348532.1
ProteinModelPortal:Q7KQM2 EnsemblProtists:PF14_0358:mRNA
GeneID:811940 KEGG:pfa:PF14_0358 EuPathDB:PlasmoDB:PF3D7_1437800
Uniprot:Q7KQM2
Length = 184
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 77/174 (44%), Positives = 108/174 (62%)
Query: 14 LDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHR 73
++K L++ KQ+VSLSAF+ LFSE+VQY + +E L + G VG ++ E L ++
Sbjct: 8 IEKELNRIKQDVSLSAFSILFSEMVQYCLYKSKRGYRIEDCLHEMGLRVGYKLNEYLTYK 67
Query: 74 DKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPK 133
+K +R ++ IL+F+ VWK LF +D L K + EYMI +K +L+N+FI++PK
Sbjct: 68 NKV-KRSINIINILTFISKHVWKYLFQHSSDLL-KSQDSIYEYMICDKNILLNKFINVPK 125
Query: 134 DMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
D G NC AF AGIV G L S+ F A VTAH + EG TTI IKF EV+
Sbjct: 126 DYGNINCAAFAAGIVEGFLCSSEFQADVTAHTIH-EGDDNYNTTIFIKFYPEVV 178
>SGD|S000002880 [details] [associations]
symbol:TRS31 "Subunit of the transport protein particle
(TRAPP) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IGI;IMP] [GO:0030008 "TRAPP complex" evidence=IDA]
[GO:0000407 "pre-autophagosomal structure" evidence=IEA]
SGD:S000002880 Pfam:PF04051 GO:GO:0005783 GO:GO:0006914
EMBL:BK006938 GO:GO:0006888 GO:GO:0000407 GO:GO:0030008
InterPro:IPR024096 InterPro:IPR007194 SUPFAM:SSF111126 PDB:3CUE
PDBsum:3CUE EMBL:U33050 KO:K12761 RefSeq:NP_010765.3 GeneID:852088
KEGG:sce:YDR477W RefSeq:NP_010760.3 GeneID:852083 KEGG:sce:YDR472W
eggNOG:COG5128 HOGENOM:HOG000176758 InterPro:IPR016696
PANTHER:PTHR20902 PIRSF:PIRSF017479 GeneTree:ENSGT00390000000976
OrthoDB:EOG47WRZ1 PIR:S69639 ProteinModelPortal:Q03337 SMR:Q03337
DIP:DIP-1709N IntAct:Q03337 MINT:MINT-401389 STRING:Q03337
PaxDb:Q03337 EnsemblFungi:YDR472W CYGD:YDR472w OMA:RDEENEY
EvolutionaryTrace:Q03337 NextBio:970397 Genevestigator:Q03337
GermOnline:YDR472W Uniprot:Q03337
Length = 283
Score = 218 (81.8 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 48/113 (42%), Positives = 69/113 (61%)
Query: 75 KGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKD 134
K RR+ ++L IL F+H T+W LF V+D L K +E ++EYMI + + +FI P +
Sbjct: 168 KMRRRDLKILDILQFIHGTLWSYLFNHVSDDLVKSSERDNEYMIVDNFPTLTQFI--PGE 225
Query: 135 MGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVL 187
+C FV GI++G L +AGFP VTAH +P +G RT LI+F +VL
Sbjct: 226 --NVSCEYFVCGIIKGFLFNAGFPCGVTAHRMP-QGGHSQRTVYLIQFDRQVL 275
Score = 106 (42.4 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 11 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELL 70
S + + L +QE SLSA AFLF E++ + E +L D G+ +G R+LELL
Sbjct: 43 SRIYSESLLFKRQEASLSAMAFLFQEMISQLHRTCKTAGDFETKLSDYGHNIGIRLLELL 102
Query: 71 CHR 73
R
Sbjct: 103 NFR 105
>CGD|CAL0002339 [details] [associations]
symbol:TRS33 species:5476 "Candida albicans" [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0030008 "TRAPP complex"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
CGD:CAL0002339 Pfam:PF04051 EMBL:AACQ01000020 EMBL:AACQ01000016
InterPro:IPR024096 InterPro:IPR007194 SUPFAM:SSF111126
HOGENOM:HOG000200502 eggNOG:NOG255558 RefSeq:XP_720822.1
RefSeq:XP_721335.1 RefSeq:XP_888838.1 ProteinModelPortal:Q5AH42
STRING:Q5AH42 GeneID:3636992 GeneID:3637480 GeneID:3703849
KEGG:cal:CaO19.13849 KEGG:cal:CaO19.6496 KEGG:cal:CaO19_6496
Uniprot:Q5AH42
Length = 212
Score = 137 (53.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 45 VDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVAD 104
+DN E+ R+E GY++G ++ E+L ++ GN+ +L I+ FV VWK L+ K D
Sbjct: 75 LDN-DEVTIRVESYGYSLGLKIAEVLLYKSSGNK-VVDILDIMKFVCRDVWKCLYNKQMD 132
Query: 105 SLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGA-----FVAGIVRGVLDSAGFPA 159
+L T H +++ + + ++ K M A F G++RG+L S G A
Sbjct: 133 NLR--TNHRGTFVLVDNNYKLISSLNSSKGMQETLSKAKVYLWFPCGVIRGILMSFGIEA 190
Query: 160 VVTA 163
V+A
Sbjct: 191 NVSA 194
>SGD|S000005641 [details] [associations]
symbol:TRS33 "Subunit of the transport protein particle
(TRAPP) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IGI]
[GO:0000407 "pre-autophagosomal structure" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0005801
"cis-Golgi network" evidence=IDA] [GO:0006461 "protein complex
assembly" evidence=IGI] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0030008 "TRAPP complex"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] SGD:S000005641 Pfam:PF04051 GO:GO:0005783
EMBL:BK006948 GO:GO:0006461 GO:GO:0006914 GO:GO:0005802 EMBL:X90518
EMBL:X94335 GO:GO:0006888 GO:GO:0000407 RefSeq:NP_014758.3
GeneID:854282 KEGG:sce:YOR115C GO:GO:0030008 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 KO:K03065 RefSeq:NP_014760.3
GeneID:854284 KEGG:sce:YOR117W GeneTree:ENSGT00390000012948
HOGENOM:HOG000200502 eggNOG:NOG255558 EMBL:Z75023 PIR:S61003
ProteinModelPortal:Q99394 SMR:Q99394 DIP:DIP-1712N IntAct:Q99394
MINT:MINT-387700 STRING:Q99394 PaxDb:Q99394 EnsemblFungi:YOR115C
CYGD:YOR115c OMA:HRGTFYL OrthoDB:EOG41RT4C NextBio:976254
Genevestigator:Q99394 GermOnline:YOR115C Uniprot:Q99394
Length = 268
Score = 122 (48.0 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 33 LFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRR--ETRLLGILSFV 90
L EL + ++ + + + RL + G+ +G ++ ELL + N + E LL I+ F+
Sbjct: 104 LIHELYKADEEEKEKVLA---RLRNIGFQIGLKLSELLIFSNNPNLKFKEMDLLLIMKFI 160
Query: 91 HSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGA---FV--- 144
VWK +FGK D+L+ T H + + + + + S+ +D F+
Sbjct: 161 CRDVWKQIFGKQIDNLK--TNHRGTFYLLDYDYRPIQSFSLEEDAKNEELKMIEPFLEIP 218
Query: 145 AGIVRGVLDSAGFPA---VVTAHFVPVEGQQRPRT 176
GI+RGVL S G+ + + A F+ RP+T
Sbjct: 219 VGIIRGVLSSLGYSSEEVICLASFID-RPTDRPKT 252
>UNIPROTKB|Q32L78 [details] [associations]
symbol:TRAPPC6B "Trafficking protein particle complex
subunit 6B" species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] Pfam:PF04051
GO:GO:0005783 GO:GO:0005794 GO:GO:0016192 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 GeneTree:ENSGT00390000012948
HOGENOM:HOG000200502 HOVERGEN:HBG056159 OrthoDB:EOG4NVZMM
EMBL:BC109723 IPI:IPI00685473 RefSeq:NP_001033223.1
UniGene:Bt.24377 ProteinModelPortal:Q32L78 SMR:Q32L78 PRIDE:Q32L78
Ensembl:ENSBTAT00000019999 GeneID:521470 KEGG:bta:521470 CTD:122553
eggNOG:NOG255558 InParanoid:Q32L78 OMA:VAFTCGL NextBio:20873310
Uniprot:Q32L78
Length = 158
Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/141 (26%), Positives = 66/141 (46%)
Query: 30 FAFLFSELVQ--YN---QTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLL 84
F L +E+V Y Q +V+N +LE+ G+ VG ++E +D ++ L
Sbjct: 7 FLLLHNEMVSGVYKSAEQGEVEN-GRCITKLENMGFRVGQGLIERFT-KDTARFKDE--L 62
Query: 85 GILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDM--GTFNCGA 142
I+ F+ W +F K D+L T H+ Y++ + + + +S K A
Sbjct: 63 DIMKFICKDFWTTVFKKQIDNLR--TNHQGIYVLQDNKFRLLTQMSAGKQYLEHASKYLA 120
Query: 143 FVAGIVRGVLDSAGFPAVVTA 163
F G++RG L + G ++VTA
Sbjct: 121 FTCGLIRGGLSNLGIKSIVTA 141
>UNIPROTKB|Q86SZ2 [details] [associations]
symbol:TRAPPC6B "Trafficking protein particle complex
subunit 6B" species:9606 "Homo sapiens" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] Pfam:PF04051 GO:GO:0005783 GO:GO:0005794
GO:GO:0016192 EMBL:CH471078 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 HOGENOM:HOG000200502 HOVERGEN:HBG056159 CTD:122553
eggNOG:NOG255558 OMA:VAFTCGL EMBL:BX161510 EMBL:BX248013
EMBL:AL833179 EMBL:AK056690 EMBL:BC047328 IPI:IPI00329125
IPI:IPI00384047 RefSeq:NP_001073005.1 RefSeq:NP_803235.1
UniGene:Hs.13303 PDB:2BJN PDB:2CFH PDB:3KXC PDBsum:2BJN PDBsum:2CFH
PDBsum:3KXC ProteinModelPortal:Q86SZ2 SMR:Q86SZ2 IntAct:Q86SZ2
MINT:MINT-3035051 STRING:Q86SZ2 PhosphoSite:Q86SZ2 DMDM:45477299
PRIDE:Q86SZ2 DNASU:122553 Ensembl:ENST00000330149
Ensembl:ENST00000347691 GeneID:122553 KEGG:hsa:122553
UCSC:uc001wut.1 UCSC:uc001wuu.1 GeneCards:GC14M039617
HGNC:HGNC:23066 HPA:HPA047928 MIM:610397 neXtProt:NX_Q86SZ2
PharmGKB:PA134973191 InParanoid:Q86SZ2 PhylomeDB:Q86SZ2
EvolutionaryTrace:Q86SZ2 GenomeRNAi:122553 NextBio:80914
ArrayExpress:Q86SZ2 Bgee:Q86SZ2 CleanEx:HS_TRAPPC6B
Genevestigator:Q86SZ2 GermOnline:ENSG00000182400 Uniprot:Q86SZ2
Length = 158
Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/141 (26%), Positives = 66/141 (46%)
Query: 30 FAFLFSELVQ--YN---QTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLL 84
F L +E+V Y Q +V+N +LE+ G+ VG ++E +D ++ L
Sbjct: 7 FLLLHNEMVSGVYKSAEQGEVEN-GRCITKLENMGFRVGQGLIERFT-KDTARFKDE--L 62
Query: 85 GILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDM--GTFNCGA 142
I+ F+ W +F K D+L T H+ Y++ + + + +S K A
Sbjct: 63 DIMKFICKDFWTTVFKKQIDNLR--TNHQGIYVLQDNKFRLLTQMSAGKQYLEHASKYLA 120
Query: 143 FVAGIVRGVLDSAGFPAVVTA 163
F G++RG L + G ++VTA
Sbjct: 121 FTCGLIRGGLSNLGIKSIVTA 141
>MGI|MGI:1925482 [details] [associations]
symbol:Trappc6b "trafficking protein particle complex 6B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016192 "vesicle-mediated transport" evidence=IEA]
MGI:MGI:1925482 Pfam:PF04051 GO:GO:0005783 GO:GO:0005794
GO:GO:0016192 InterPro:IPR024096 InterPro:IPR007194
SUPFAM:SSF111126 GeneTree:ENSGT00390000012948 HOGENOM:HOG000200502
HOVERGEN:HBG056159 OrthoDB:EOG4NVZMM CTD:122553 eggNOG:NOG255558
OMA:VAFTCGL EMBL:AK020026 EMBL:AK089083 EMBL:BC031464
IPI:IPI00134426 RefSeq:NP_084333.1 UniGene:Mm.290070
ProteinModelPortal:Q9D289 SMR:Q9D289 IntAct:Q9D289
PhosphoSite:Q9D289 PaxDb:Q9D289 PRIDE:Q9D289
Ensembl:ENSMUST00000021380 GeneID:78232 KEGG:mmu:78232
UCSC:uc007npy.1 InParanoid:Q9D289 ChiTaRS:TRAPPC6B NextBio:348473
Bgee:Q9D289 CleanEx:MM_TRAPPC6B Genevestigator:Q9D289
GermOnline:ENSMUSG00000020993 Uniprot:Q9D289
Length = 158
Score = 109 (43.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 30 FAFLFSELVQ--YN---QTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLL 84
F L +E+V Y Q +V+N +LE G+ VG ++E +D ++ L
Sbjct: 7 FLLLHNEMVSGVYKSAEQGEVEN-GRCVTKLESMGFRVGQGLIERFT-KDTARFKDE--L 62
Query: 85 GILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDM--GTFNCGA 142
I+ F+ W +F K D+L T H+ Y++ + + + +S K A
Sbjct: 63 DIMKFICKDFWTTVFKKQIDNLR--TNHQGIYVLQDNKFRLLIQLSAGKQYLEHASKYLA 120
Query: 143 FVAGIVRGVLDSAGFPAVVTA 163
F G++RG L + G ++VTA
Sbjct: 121 FTCGLIRGGLSNLGIKSIVTA 141
>UNIPROTKB|Q3T086 [details] [associations]
symbol:TRAPPC6A "Trafficking protein particle complex
subunit 6A" species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] Pfam:PF04051
GO:GO:0005783 GO:GO:0005794 GO:GO:0016192 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 EMBL:BC102525 IPI:IPI00703403
RefSeq:NP_001029592.1 UniGene:Bt.9251 ProteinModelPortal:Q3T086
SMR:Q3T086 PRIDE:Q3T086 Ensembl:ENSBTAT00000009288 GeneID:512261
KEGG:bta:512261 CTD:79090 eggNOG:NOG318088
GeneTree:ENSGT00390000012948 HOGENOM:HOG000200502
HOVERGEN:HBG056159 InParanoid:Q3T086 OMA:GFRVGQA OrthoDB:EOG4NVZMM
NextBio:20870308 Uniprot:Q3T086
Length = 159
Score = 102 (41.0 bits), Expect = 0.00041, P = 0.00041
Identities = 35/111 (31%), Positives = 50/111 (45%)
Query: 55 LEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHED 114
LE G+ VG + E L R E L IL F+ +W +F K DSL T H+
Sbjct: 37 LEGMGFRVGQALGERLPRETLTFREE---LDILKFLCKDLWVAVFHKQMDSLR--TNHQG 91
Query: 115 EYMISEKE--LLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTA 163
Y++ + LLV + AF G++RG L + G ++VTA
Sbjct: 92 TYVLQDNSFPLLVRMASGLQYLEEAPKFLAFTCGLLRGTLSTLGVKSLVTA 142
>ASPGD|ASPL0000004639 [details] [associations]
symbol:AN10826 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF04051 EMBL:BN001301 InterPro:IPR024096
InterPro:IPR007194 SUPFAM:SSF111126 HOGENOM:HOG000200502
OMA:VAFTCGL EnsemblFungi:CADANIAT00007265 Uniprot:C8V0H5
Length = 187
Score = 103 (41.3 bits), Expect = 0.00073, P = 0.00073
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 17 PLSKGKQE--VSLSAFAFLFSELVQYNQTQVDNIAELER-------------RLEDAGYA 61
P+ Q+ +S S FL ELV + ++A ER RLE GY
Sbjct: 10 PIPSNSQDRLLSASCLDFLLIELVPMAERIAKDLAADERLLDDEETKETAFSRLESLGYR 69
Query: 62 VGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEK 121
VG + E RD+ R T L ++ F+ +W LF K D+L+ T H Y++++
Sbjct: 70 VGQGLAERFS-RDRP--RFTDNLDVIKFLCKDLWMTLFKKQIDNLK--TNHRGVYVLTDN 124
Query: 122 ELLVNRFISIP-KDMGTFNCGAFV---AGIVRGVLDSAGFPAVVTAHFVPVEG 170
+S+ ++ A++ G++RG L + G V A + G
Sbjct: 125 SFRPFAKMSMSSRNEALSRAQAYLWFPCGVIRGALSNLGIHTTVQAETTELPG 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 198 0.00083 111 3 11 22 0.44 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 586 (62 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.39u 0.12s 18.51t Elapsed: 00:00:01
Total cpu time: 18.39u 0.12s 18.51t Elapsed: 00:00:01
Start: Fri May 10 08:18:26 2013 End: Fri May 10 08:18:27 2013