Query 029156
Match_columns 198
No_of_seqs 116 out of 531
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 13:32:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029156.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029156hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j3wb1 d.278.1.2 (B:21-188) T 100.0 1.2E-60 8.6E-65 386.3 17.7 166 22-194 1-166 (168)
2 d1wc9a_ d.278.1.2 (A:) Traffic 100.0 3.6E-51 2.6E-55 328.6 15.7 159 23-186 1-160 (161)
3 d2osoa1 d.278.1.3 (A:5-156) Hy 95.6 0.0037 2.7E-07 47.1 3.6 133 20-181 18-151 (152)
4 d1u55a_ d.278.1.1 (A:) Methyl- 89.5 0.95 6.9E-05 34.3 8.8 120 51-186 63-182 (188)
5 d2ve8a1 a.4.5.67 (A:745-811) D 36.3 22 0.0016 22.3 4.0 40 33-72 5-44 (67)
6 d2j5pa1 a.4.5.67 (A:1261-1329) 30.2 20 0.0015 22.6 3.0 41 33-73 8-48 (69)
7 d1jg5a_ d.205.1.1 (A:) GTP cyc 28.9 11 0.0008 24.7 1.5 15 48-62 52-66 (83)
8 d2c5ra1 a.251.1.1 (A:66-129) E 27.7 61 0.0044 19.6 5.0 42 51-97 9-52 (64)
9 d1oyia_ a.4.5.19 (A:) dsRNA-bi 26.0 5.2 0.00038 24.3 -0.5 26 13-38 23-48 (62)
10 d1ehia2 d.142.1.1 (A:135-362) 23.5 50 0.0037 23.5 4.8 70 82-154 144-220 (228)
11 d1e4ea2 d.142.1.1 (A:132-342) 23.3 19 0.0014 25.6 2.2 72 82-153 136-211 (211)
12 d1p6ta1 d.58.17.1 (A:1-72) Pot 21.1 18 0.0013 22.0 1.5 16 47-62 56-71 (72)
No 1
>d2j3wb1 d.278.1.2 (B:21-188) TRAPPC5, similar to trafficking protein particle complex 5 {Zebrafish (Brachydanio rerio) [TaxId: 7955]}
Probab=100.00 E-value=1.2e-60 Score=386.34 Aligned_cols=166 Identities=49% Similarity=0.821 Sum_probs=160.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhhhhhHHHHHHhhhhcCCCCCccchHHHHHHHHHHHHHHhhcc
Q 029156 22 KQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGK 101 (198)
Q Consensus 22 ~~~Vs~s~f~~L~~EiV~y~~~~~~~~~e~~~~Le~mGy~VG~rLiE~l~~r~k~~~r~~~~ld~lkfI~k~~Wk~lFgk 101 (198)
|++||+|+|+|||+|||+|+++++++.+|++++|++|||+||.||+|++++|++..+||++++++++||||++|+++|||
T Consensus 1 k~~Vs~s~f~~L~~ElV~y~~~~~~~~~e~~~~Le~mG~~vG~rl~E~l~~r~~~~~R~~~~~~~l~fI~k~~W~~lfgk 80 (168)
T d2j3wb1 1 KTEVSVSAFALLFSEMVQYCQSRVYSVSELQARLADMGQGVGASLLDVLVMREKNGKRETKVLNILLFIKVNVWKALFGK 80 (168)
T ss_dssp CCEEEHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHTHHHHHHHSS
T ss_pred CchhCHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCcccccHHHHHHHHHHHHHHHHcCc
Confidence 57999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred cccccccccCCCCeEEEEeCCcccccccccCCCCCCccchhhhHHHHHHHhhhCCCCeEEEEEEccCCCCCCCceEEEEE
Q 029156 102 VADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIK 181 (198)
Q Consensus 102 ~~D~Le~~tn~~~~Y~l~D~~~~~~~~vs~p~~~~~l~y~af~~GiIrGaL~~lg~~~~Vta~~~~~~~~~~p~~~f~Ik 181 (198)
|+|+|++.++|+|+|+|+|++|+|++|||+|+++++++|++|+||||||||+++||+|+||||+. |+|+|+||
T Consensus 81 ~~d~L~~~~~~~~~y~I~d~~~~~~~~vs~p~~~~~l~y~~f~~GiIrGaL~~~g~~~~Vta~~~-------~~~~f~ik 153 (168)
T d2j3wb1 81 EADKLEQANDDDKTYYIIEKEPLINAYISVPKENSTLNCAAFTGGIVEAILTHSGFPAKVTVHWH-------KGTTLMIK 153 (168)
T ss_dssp CCSEEEEETTEEEEEEEEESSCGGGGTCSSCCSSCCSHHHHHHHHHHHHHHHHTTCCEEEEEEES-------SSEEEEEE
T ss_pred CcccccccCCCCceEEEEcCCchhhheeccCccccccchHHHHHHHHHHHHHHCCCceEEEEeeC-------CCeEEEEE
Confidence 99999766889999999999999999999999999999999999999999999999999999984 58999999
Q ss_pred echHHHhhhhhhh
Q 029156 182 FAEEVLTSFSLIV 194 (198)
Q Consensus 182 ~~~~v~~re~~~~ 194 (198)
|+++|++||+++.
T Consensus 154 f~~~v~~Re~~l~ 166 (168)
T d2j3wb1 154 FDESVIARDKALD 166 (168)
T ss_dssp ECHHHHHHHHHTC
T ss_pred ccHHHHHHHHhhc
Confidence 9999999999874
No 2
>d1wc9a_ d.278.1.2 (A:) Trafficking protein particle complex subunit 3, Bet3 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=3.6e-51 Score=328.58 Aligned_cols=159 Identities=16% Similarity=0.324 Sum_probs=147.9
Q ss_pred cchhHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhhhhhHHHHHHhhhhcCCCCCccchHHHHHHHHHHHHHHhhccc
Q 029156 23 QEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKV 102 (198)
Q Consensus 23 ~~Vs~s~f~~L~~EiV~y~~~~~~~~~e~~~~Le~mGy~VG~rLiE~l~~r~k~~~r~~~~ld~lkfI~k~~Wk~lFgk~ 102 (198)
.|||+++|++||+|||+|++++.++.++++++|++|||+||.||+|++++|+ +.+||++++|+++||||++|+++||||
T Consensus 1 ~kv~~elfal~yg~iV~~~~~d~e~~~e~~~~Le~~G~~IG~RLiE~~~~r~-~~~R~~~~l~~l~fI~~~~wk~~fgk~ 79 (161)
T d1wc9a_ 1 KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARS-NVGRCHDFRETADVIAKVAFKMYLGIT 79 (161)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCCSCCCHHHHHHHHHHTHHHHHHSCC
T ss_pred CcccHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhCcchhHHHHHHHHhhc-CCCccccHHHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999999999999999999999999997 689999999999999999999999999
Q ss_pred ccccccccCCCCe-EEEEeCCcccccccccCCCCCCccchhhhHHHHHHHhhhCCCCeEEEEEEccCCCCCCCceEEEEE
Q 029156 103 ADSLEKGTEHEDE-YMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIK 181 (198)
Q Consensus 103 ~D~Le~~tn~~~~-Y~l~D~~~~~~~~vs~p~~~~~l~y~af~~GiIrGaL~~lg~~~~Vta~~~~~~~~~~p~~~f~Ik 181 (198)
+|+| ++|++++ |+++++++|+.+|+++|++++.++|++|+||||||||+++||+|+|| +++|.++++|.|.+.||
T Consensus 80 ~d~l--~~~~~~~~~~~i~~~npl~~fv~lP~~~~~l~y~~f~cGiIrGaL~~~g~~~~V~--~~~d~l~gd~~~~i~v~ 155 (161)
T d1wc9a_ 80 PSIT--NWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAVEAK--FVQDTLKGDGVTEIRMR 155 (161)
T ss_dssp CEEE--CCCTTSCEEEEEESCCGGGTTCCCCTTCTTCCTTTHHHHHHHHHHHTTTEEEEEE--EEECGGGTCSSEEEEEE
T ss_pred cccc--eecCCCCeEEEEecCCCccceEEcCcccCCceehhhHHHHHHHHHHHCCCeEEEE--EEecccCCCCceEEEEE
Confidence 9999 5777765 66766677789999999999999999999999999999999999998 67788899999999999
Q ss_pred echHH
Q 029156 182 FAEEV 186 (198)
Q Consensus 182 ~~~~v 186 (198)
|.+.+
T Consensus 156 ~~~~~ 160 (161)
T d1wc9a_ 156 FIRRI 160 (161)
T ss_dssp EEEEC
T ss_pred Eeeec
Confidence 98754
No 3
>d2osoa1 d.278.1.3 (A:5-156) Hypothetical protein MJ1460 {Methanococcus jannaschii [TaxId: 2190]}
Probab=95.64 E-value=0.0037 Score=47.12 Aligned_cols=133 Identities=16% Similarity=0.133 Sum_probs=76.0
Q ss_pred cCccchhHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhhhhhHHHHHHhhhhcCCCCCccchHHHHHHHHHHHHHHhh
Q 029156 20 KGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLF 99 (198)
Q Consensus 20 ~~~~~Vs~s~f~~L~~EiV~y~~~~~~~~~e~~~~Le~mGy~VG~rLiE~l~~r~k~~~r~~~~ld~lkfI~k~~Wk~lF 99 (198)
+....|+.+.|.++..+|..-+.... ...-|-..||++|.++.++. ..++.+|..+.-|=.+-
T Consensus 18 ~~~~~ip~~~f~l~~~~l~d~l~~~~-----~~~iLY~aGk~lGr~~~~k~------------~eel~~ff~~~g~G~L~ 80 (152)
T d2osoa1 18 KESKKIPMPYFGLFALVIFDKVKELG-----SETSLYEIGEEFGKMLSPKN------------IEELKKIFKLMNFGDLE 80 (152)
T ss_dssp HHSCCCCHHHHHHHHHHHHHHHC--C-----CCCCHHHHHHHHHHHHCCSS------------HHHHHHHHHHHTCCEEE
T ss_pred HHHhcCCHHHHHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHcCCceEE
Confidence 34466899999999987765443322 22346667888888776543 34566666665553321
Q ss_pred cccccccccccCCCCeEEEEeCCcccccccccCCCCCCccchhhhHHHHHHHhhhC-CCCeEEEEEEccCCCCCCCceEE
Q 029156 100 GKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSA-GFPAVVTAHFVPVEGQQRPRTTI 178 (198)
Q Consensus 100 gk~~D~Le~~tn~~~~Y~l~D~~~~~~~~vs~p~~~~~l~y~af~~GiIrGaL~~l-g~~~~Vta~~~~~~~~~~p~~~f 178 (198)
=...+-. ..++.+.+.-.+++.-... .+-.-+.|.+|++.|+++.+ |-+..|. + +.....+++.|.|
T Consensus 81 I~~~~~~----~~~~~~~~e~~~~~~~~g~------~~~pvC~~~~G~lag~~~~~~g~~~~v~-E-~~C~a~G~~~C~F 148 (152)
T d2osoa1 81 IDENKIL----LKNPPYKIKLSNPPYQWVS------KEEPIHDFIAGILAGCLEEIFYYYFVVN-E-VECVSQGKDKCVF 148 (152)
T ss_dssp CCHHHHH----HSCSCEEEEEESCSCTTCC------CSSCCCHHHHHHHHHHHHHHHCSEEEEE-E-EECGGGTCSSEEE
T ss_pred EEecccc----cccceEEEEEccChhhhCC------CCCCcchhhHHHHHHHHHHHhCCceEEE-E-eehhhCCCCceEE
Confidence 1111111 1234455555554422211 12245678899999999886 4444432 2 2344457889999
Q ss_pred EEE
Q 029156 179 LIK 181 (198)
Q Consensus 179 ~Ik 181 (198)
.|+
T Consensus 149 ~v~ 151 (152)
T d2osoa1 149 EVK 151 (152)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
No 4
>d1u55a_ d.278.1.1 (A:) Methyl-accepting chemotaxis protein {Thermoanaerobacter tengcongensis [TaxId: 119072]}
Probab=89.47 E-value=0.95 Score=34.30 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=68.1
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhcCCCCCccchHHHHHHHHHHHHHHhhcccccccccccCCCCeEEEEeCCcccccccc
Q 029156 51 LERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130 (198)
Q Consensus 51 ~~~~Le~mGy~VG~rLiE~l~~r~k~~~r~~~~ld~lkfI~k~~Wk~lFgk~~D~Le~~tn~~~~Y~l~D~~~~~~~~vs 130 (198)
...-|+..|...=.++.+.+...-+ .....++|..|.-|+..+=+.+=+-..-..+ +.=.+.+-..+.+-|
T Consensus 63 ~~~ll~~fG~~~~~~~~~~y~~~~~-g~~~~dFL~~ld~iH~~v~~~yp~~~~P~f~--------~~~~~~~~l~l~Y~S 133 (188)
T d1u55a_ 63 VNEIWREVGRQNIKTFSEWFPSYFA-GRRLVNFLMMMDEVHLQLTKMIKGATPPRLI--------AKPVAKDAIEMEYVS 133 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHSGGGTT-TCCHHHHHHHHHHHHHHHHTTSTTCCCCBCC--------EEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHhc-CCCHHHHHHhhhhHHHHHHHhCCCCCCCeEE--------EEECCCCEEEEEEEe
Confidence 4566777887655566664432222 3456777777777777753322121111111 111112212222333
Q ss_pred cCCCCCCccchhhhHHHHHHHhhhCCCCeEEEEEEccCCCCCCCceEEEEEechHH
Q 029156 131 IPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEV 186 (198)
Q Consensus 131 ~p~~~~~l~y~af~~GiIrGaL~~lg~~~~Vta~~~~~~~~~~p~~~f~Ik~~~~v 186 (198)
++ ..+.|+.|+|+|+-+-.|-+..|...- .....+.+.|.|+|+|+..+
T Consensus 134 -~R-----~l~~~~~Gli~g~A~~f~~~i~I~~~~-~~~~~~~~~~~~~i~f~n~~ 182 (188)
T d1u55a_ 134 -KR-----KMYDYFLGLIEGSSKFFKEEISVEEVE-RGEKDGFSRLKVRIKFKNPV 182 (188)
T ss_dssp -TT-----CCHHHHHHHHHHHHHHHTCCEEEEEEE-EEEETTEEEEEEEEEESSCC
T ss_pred -CC-----ChHHHHHHHHHHHHHHhCCceEEEEee-ccccCCccEEEEEEEEEchh
Confidence 22 356899999999999999988887422 12233556899999998654
No 5
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas aeruginosa [TaxId: 287]}
Probab=36.33 E-value=22 Score=22.29 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHhhhhhhHHHHHHhhh
Q 029156 33 LFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCH 72 (198)
Q Consensus 33 L~~EiV~y~~~~~~~~~e~~~~Le~mGy~VG~rLiE~l~~ 72 (198)
||.+.+.+...........-++=-++||+=..||+|.+-.
T Consensus 5 ly~~a~~~V~~~~kaS~S~lQR~l~IGYnRAariid~LE~ 44 (67)
T d2ve8a1 5 LYDEAVRFVTESRRASISAVQRKLKIGYNRAARMIEAMEM 44 (67)
T ss_dssp THHHHHHHHHHHCCCCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccHHHHHHHHhcchHHHHHHHHHHHH
Confidence 5777888877765544455555568999999999999985
No 6
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=30.20 E-value=20 Score=22.61 Aligned_cols=41 Identities=24% Similarity=0.323 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHhhhhhhHHHHHHhhhh
Q 029156 33 LFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHR 73 (198)
Q Consensus 33 L~~EiV~y~~~~~~~~~e~~~~Le~mGy~VG~rLiE~l~~r 73 (198)
||.+.|.+..+...-....-++=-++||+=..||+|.+-..
T Consensus 8 ly~~a~~~V~~~~kaS~S~lQR~l~IGYnRAariid~LE~~ 48 (69)
T d2j5pa1 8 LFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQ 48 (69)
T ss_dssp THHHHHHHHHHTTEEEHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccHHHHHHHHhccchHHHHHHHHHHHC
Confidence 67778887777654334455555689999999999998753
No 7
>d1jg5a_ d.205.1.1 (A:) GTP cyclohydrolase I feedback regulatory protein, GFRP {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.90 E-value=11 Score=24.69 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=12.7
Q ss_pred hHHHHHHHHHhhhhh
Q 029156 48 IAELERRLEDAGYAV 62 (198)
Q Consensus 48 ~~e~~~~Le~mGy~V 62 (198)
..-+-++||.|||+|
T Consensus 52 Pr~VLnKLE~~GyrV 66 (83)
T d1jg5a_ 52 PRIVLDKLECRGFRV 66 (83)
T ss_dssp HHHHHHHHHHTTCEE
T ss_pred hHHHHHHHhhcCeEE
Confidence 456889999999986
No 8
>d2c5ra1 a.251.1.1 (A:66-129) Early protein gp16.7 {Bacteriophage phi-29 [TaxId: 10756]}
Probab=27.71 E-value=61 Score=19.62 Aligned_cols=42 Identities=19% Similarity=0.398 Sum_probs=33.3
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhcCCCCCccchHHHHHHH--HHHHHHH
Q 029156 51 LERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFV--HSTVWKV 97 (198)
Q Consensus 51 ~~~~Le~mGy~VG~rLiE~l~~r~k~~~r~~~~ld~lkfI--~k~~Wk~ 97 (198)
+-..-++-|-+|-.-++|.+.. .+.....++|.+| .+.+||.
T Consensus 9 vLDlYe~SnIrIP~DIIEdl~~-----~~L~te~EVmnYiEnqR~~WKL 52 (64)
T d2c5ra1 9 VLDLYEQSNIRIPSDIIEDLVN-----QRLQSEQEVLNYIETQRTYWKL 52 (64)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHT-----TCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcCcHHHHHHHHH-----hhhhhHHHHHHHHHhhHhHHhh
Confidence 3455567789999999999993 5777888999998 4678985
No 9
>d1oyia_ a.4.5.19 (A:) dsRNA-binding protein E3 (E3L) {Vaccinia virus [TaxId: 10245]}
Probab=26.04 E-value=5.2 Score=24.31 Aligned_cols=26 Identities=27% Similarity=0.367 Sum_probs=22.4
Q ss_pred cccccCccCccchhHHHHHHHHHHHH
Q 029156 13 VLDKPLSKGKQEVSLSAFAFLFSELV 38 (198)
Q Consensus 13 i~~~~~~~~~~~Vs~s~f~~L~~EiV 38 (198)
-+.|+|+-.+.+||..++++--++||
T Consensus 23 qltrqlnmekrevnkalydlqrsamv 48 (62)
T d1oyia_ 23 QLTRQLNMEKREVNKALYDLQRSAMV 48 (62)
T ss_dssp HHHHHSSSCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhhhe
Confidence 35788888899999999999888887
No 10
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=23.45 E-value=50 Score=23.47 Aligned_cols=70 Identities=14% Similarity=0.142 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHHHHhhccc---ccccccccCCCCeEEEEeCCccc--ccccccCC--CCCCccchhhhHHHHHHHhhh
Q 029156 82 RLLGILSFVHSTVWKVLFGKV---ADSLEKGTEHEDEYMISEKELLV--NRFISIPK--DMGTFNCGAFVAGIVRGVLDS 154 (198)
Q Consensus 82 ~~ld~lkfI~k~~Wk~lFgk~---~D~Le~~tn~~~~Y~l~D~~~~~--~~~vs~p~--~~~~l~y~af~~GiIrGaL~~ 154 (198)
...+.++-++..+|+.+-.+. +|-. .+.+|++++.+=|+.+ ...-.+|. ...+++|..++.-||+=+|+.
T Consensus 144 ~~~~~i~~~~~~~~~~lg~~~~~~iD~~---~d~~g~~~~lEvN~~Pg~~~~s~~~~~~~~~G~~~~~li~~ii~~~~~~ 220 (228)
T d1ehia2 144 EVTKEVKQMALDAYKVLNLRGEARMDFL---LDENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFED 220 (228)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEEE---ECTTCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhcCCeeeEEEE---EcCCCcEEEEEecCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 455677888888898876543 4543 3445776676655433 22111243 234678999999999988865
No 11
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]}
Probab=23.25 E-value=19 Score=25.63 Aligned_cols=72 Identities=10% Similarity=0.133 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHHHHHhhcccccccccccCCCCeEEEEeCCccc--ccccccCC--CCCCccchhhhHHHHHHHhh
Q 029156 82 RLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLV--NRFISIPK--DMGTFNCGAFVAGIVRGVLD 153 (198)
Q Consensus 82 ~~ld~lkfI~k~~Wk~lFgk~~D~Le~~tn~~~~Y~l~D~~~~~--~~~vs~p~--~~~~l~y~af~~GiIrGaL~ 153 (198)
+..+.++-+++.+++.+....+-.+|=.-+.+|.+++.|=|+.+ ...-.+|. ...+++|..++-.||+-||+
T Consensus 136 ~~~~~i~~~a~~~~~~lg~~g~~~id~~~~~~g~~~viEiN~~pg~~~~s~~~~~~~~~G~~~~~li~~iv~~al~ 211 (211)
T d1e4ea2 136 EERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVLNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLALK 211 (211)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCEEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHHHHHHC
T ss_pred hhhhhhHHHHHHHHHhhccCCeeEEEEEEcCCCCEEEEEEeCCCCCCCccHHHHHHHHcCCCHHHHHHHHHHHHcC
Confidence 44566777888888876543333333223456788888766443 11111222 12356788888899988874
No 12
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=21.10 E-value=18 Score=21.99 Aligned_cols=16 Identities=31% Similarity=0.677 Sum_probs=13.7
Q ss_pred ChHHHHHHHHHhhhhh
Q 029156 47 NIAELERRLEDAGYAV 62 (198)
Q Consensus 47 ~~~e~~~~Le~mGy~V 62 (198)
+.+++.+.++++||.|
T Consensus 56 ~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 56 GTAAIQEKIEKLGYHV 71 (72)
T ss_dssp CHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHhCCcc
Confidence 4678999999999975
Done!