BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029158
(198 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553339|ref|XP_002517711.1| GTP binding protein, putative [Ricinus communis]
gi|223543109|gb|EEF44643.1| GTP binding protein, putative [Ricinus communis]
Length = 489
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/211 (85%), Positives = 188/211 (89%), Gaps = 14/211 (6%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL FFAAAKVSSSFP PDLPEIAFAGRSNVGKSS+LNALTRQWGV RTSDKPGLTQTIN
Sbjct: 279 NKLTFFAAAKVSSSFPPPDLPEIAFAGRSNVGKSSLLNALTRQWGVARTSDKPGLTQTIN 338
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG KLCLVDLPGYGFAYAKEEVKDAWE+LVKEYVSTRV LKRVCLLIDTKWG+KPRD
Sbjct: 339 FFSLGPKLCLVDLPGYGFAYAKEEVKDAWEDLVKEYVSTRVGLKRVCLLIDTKWGMKPRD 398
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPV---------- 171
HELI+LMERSQTKYQ+VLTKTD VFPIDVARRAMQIEESLKAN S+VQPV
Sbjct: 399 HELINLMERSQTKYQIVLTKTDVVFPIDVARRAMQIEESLKANKSIVQPVFFDVSQSNYV 458
Query: 172 ----MMVSSKSGAGIRSLRTVLSKIARFAKV 198
MMVSSKSGAGIRSLRTVLSKIA FAK+
Sbjct: 459 VFTQMMVSSKSGAGIRSLRTVLSKIAWFAKL 489
>gi|449439155|ref|XP_004137353.1| PREDICTED: uncharacterized protein LOC101223165 [Cucumis sativus]
Length = 535
Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/197 (88%), Positives = 185/197 (93%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL FFAAAKVSSSFP PD+PEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 339 NKLTFFAAAKVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 398
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG+KL LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRV L+RVCLL+DTKWG+KPRD
Sbjct: 399 FFNLGSKLSLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVGLRRVCLLVDTKWGMKPRD 458
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI LMERSQTKYQVVLTKTDTVFP+DVARRAMQIEE L N S+VQP+MMVSSKSGAG
Sbjct: 459 QELIDLMERSQTKYQVVLTKTDTVFPMDVARRAMQIEERLTRNKSIVQPLMMVSSKSGAG 518
Query: 182 IRSLRTVLSKIARFAKV 198
IRSLR+VL+ IARFAKV
Sbjct: 519 IRSLRSVLATIARFAKV 535
>gi|224145468|ref|XP_002325653.1| predicted protein [Populus trichocarpa]
gi|222862528|gb|EEF00035.1| predicted protein [Populus trichocarpa]
Length = 305
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/197 (88%), Positives = 185/197 (93%), Gaps = 1/197 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL FFAAAKVSSSFP P LPEIAFAGRSNVGKSS+LN+LTRQWGV RTSDKPGLTQTIN
Sbjct: 110 NKLTFFAAAKVSSSFPPPGLPEIAFAGRSNVGKSSLLNSLTRQWGVARTSDKPGLTQTIN 169
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+LG +CLVDLPGYGFAYAKEEVKD+WEELVKEYVS RV+LKRVCLLIDTKWG+KPRD
Sbjct: 170 FFELGN-VCLVDLPGYGFAYAKEEVKDSWEELVKEYVSMRVNLKRVCLLIDTKWGMKPRD 228
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI LMER QTKYQVV+TKTD VFPIDVARRAMQIEESLKAN SLVQPVMMVSSKSGAG
Sbjct: 229 RELIDLMERYQTKYQVVMTKTDLVFPIDVARRAMQIEESLKANKSLVQPVMMVSSKSGAG 288
Query: 182 IRSLRTVLSKIARFAKV 198
IRS+RTVLSKIARFAK+
Sbjct: 289 IRSVRTVLSKIARFAKL 305
>gi|356569473|ref|XP_003552925.1| PREDICTED: uncharacterized protein LOC100799694 [Glycine max]
Length = 540
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/196 (86%), Positives = 183/196 (93%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAAKVSSSFP P+LPEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 343 NKLEFFAAAKVSSSFPTPNLPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 402
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+LGTK CLVDLPGYGFAYAKEEVK++WEELVKEYVSTRV LKRVCLLIDTKWG+KPRD
Sbjct: 403 FFQLGTKHCLVDLPGYGFAYAKEEVKESWEELVKEYVSTRVGLKRVCLLIDTKWGMKPRD 462
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI LMERS+TKYQ+VLTKTD VFPIDVARRAMQIEE+L N S+V+PVMMVSS SGAG
Sbjct: 463 LELIELMERSKTKYQIVLTKTDMVFPIDVARRAMQIEENLFQNKSVVKPVMMVSSNSGAG 522
Query: 182 IRSLRTVLSKIARFAK 197
IRSLRT L+ I RFA+
Sbjct: 523 IRSLRTALANITRFAR 538
>gi|449516736|ref|XP_004165402.1| PREDICTED: probable GTP-binding protein EngB-like [Cucumis sativus]
Length = 373
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/197 (86%), Positives = 183/197 (92%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL FFAAAKVSSSFP PD+PEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQ +
Sbjct: 177 NKLTFFAAAKVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQVLK 236
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG+KL LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRV L+RVCLL+DTKWG+KPRD
Sbjct: 237 FFNLGSKLSLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVGLRRVCLLVDTKWGMKPRD 296
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI LMERSQTKYQVVLTKTDTVFP+DVARRAMQIEE L N S+VQP+MMVSSKSGAG
Sbjct: 297 QELIDLMERSQTKYQVVLTKTDTVFPMDVARRAMQIEERLTRNKSIVQPLMMVSSKSGAG 356
Query: 182 IRSLRTVLSKIARFAKV 198
IRSLR+VL+ IARFAKV
Sbjct: 357 IRSLRSVLATIARFAKV 373
>gi|356537641|ref|XP_003537334.1| PREDICTED: uncharacterized protein LOC100801850 [Glycine max]
Length = 535
Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/196 (86%), Positives = 183/196 (93%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL+FFAAAKVSSSFP P+LPEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 338 NKLDFFAAAKVSSSFPPPNLPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 397
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LGTK CLVDLPGYGFAYAKEEVK++WEELVKEYVSTRV L+RVCLLIDTKWG+KPRD
Sbjct: 398 FFNLGTKHCLVDLPGYGFAYAKEEVKESWEELVKEYVSTRVGLRRVCLLIDTKWGMKPRD 457
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI LMERS+TKYQ+VLTKTD VFPIDVARRAMQIEESL N S+V+PVMMVSSKSGAG
Sbjct: 458 LELIELMERSKTKYQIVLTKTDVVFPIDVARRAMQIEESLFQNKSVVKPVMMVSSKSGAG 517
Query: 182 IRSLRTVLSKIARFAK 197
IRSLRT L+ I RFA+
Sbjct: 518 IRSLRTALANITRFAR 533
>gi|42573726|ref|NP_974959.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
gi|222423373|dbj|BAH19659.1| AT5G58370 [Arabidopsis thaliana]
gi|332009661|gb|AED97044.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
Length = 465
Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 168/196 (85%), Positives = 183/196 (93%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAA VSSSFP PD+PEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 269 NKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 328
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG K+ LVDLPGYGFA+AK+EVK+AWE+LVKEYVSTR SLKRVCLL+DTKWG+KPRD
Sbjct: 329 FFGLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRD 388
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI+LMERS TKYQ+VLTKTD VFPIDVARRAMQIEE LKAN S+VQP+MMVSS+SGAG
Sbjct: 389 QELINLMERSNTKYQIVLTKTDVVFPIDVARRAMQIEEKLKANRSIVQPLMMVSSRSGAG 448
Query: 182 IRSLRTVLSKIARFAK 197
I SLRT L+KIARFAK
Sbjct: 449 IGSLRTALAKIARFAK 464
>gi|297793371|ref|XP_002864570.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310405|gb|EFH40829.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 467
Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 167/196 (85%), Positives = 183/196 (93%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAA VSSSFP PD+PEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 271 NKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 330
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG K+ LVDLPGYGFA+AK+EVK+AWE+LVKEYVSTR SLKRVCLL+DTKWG+KPRD
Sbjct: 331 FFGLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRD 390
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI+LMERS TKYQ+VLTKTD VFP+DVARRAMQIEE LKAN S+VQP+MMVSS+SGAG
Sbjct: 391 QELINLMERSNTKYQIVLTKTDVVFPMDVARRAMQIEEKLKANRSIVQPLMMVSSRSGAG 450
Query: 182 IRSLRTVLSKIARFAK 197
I SLRT L+KIARFAK
Sbjct: 451 IGSLRTALAKIARFAK 466
>gi|343172533|gb|AEL98970.1| putative GTP-binding protein, partial [Silene latifolia]
Length = 343
Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 170/196 (86%), Positives = 182/196 (92%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAA+VSSSFP PDLPEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPG TQ+IN
Sbjct: 148 NKLEFFAAARVSSSFPPPDLPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGHTQSIN 207
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG+KL LVDLPGYGFAYAK+EVK+AWEELVKEYVSTRV LKRVCLLIDTKWG+KPRD
Sbjct: 208 FFNLGSKLNLVDLPGYGFAYAKDEVKEAWEELVKEYVSTRVGLKRVCLLIDTKWGMKPRD 267
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI LMERSQTKYQVVLTKTD VFPIDVARRAMQIEE+LK + S+VQPVMMVSSKSGAG
Sbjct: 268 IELIHLMERSQTKYQVVLTKTDVVFPIDVARRAMQIEETLKEHKSIVQPVMMVSSKSGAG 327
Query: 182 IRSLRTVLSKIARFAK 197
IR LRT L K+AR+ K
Sbjct: 328 IRCLRTALVKMARYLK 343
>gi|343172535|gb|AEL98971.1| putative GTP-binding protein, partial [Silene latifolia]
Length = 343
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/196 (86%), Positives = 182/196 (92%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAA+VSSSFP PDLPEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPG TQ+IN
Sbjct: 148 NKLEFFAAARVSSSFPPPDLPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGHTQSIN 207
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG+KL LVDLPGYGFAYAK+EVK+AWEELVKEY+STRV LKRVCLLIDTKWG+KPRD
Sbjct: 208 FFNLGSKLNLVDLPGYGFAYAKDEVKEAWEELVKEYLSTRVGLKRVCLLIDTKWGMKPRD 267
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI LMERSQTKYQVVLTKTD VFPIDVARRAMQIEE+LK + S+VQPVMMVSSKSGAG
Sbjct: 268 IELIHLMERSQTKYQVVLTKTDVVFPIDVARRAMQIEETLKEHKSIVQPVMMVSSKSGAG 327
Query: 182 IRSLRTVLSKIARFAK 197
IR LRT L K+AR+ K
Sbjct: 328 IRCLRTALVKMARYLK 343
>gi|125546199|gb|EAY92338.1| hypothetical protein OsI_14063 [Oryza sativa Indica Group]
Length = 571
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/196 (80%), Positives = 180/196 (91%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAAK+SSSFP P LPEIAFAG SNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 375 NKLEFFAAAKISSSFPPPTLPEIAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 434
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +KLCLVDLPGYGFAYAK+EVKD+W+ELVKEYVSTRV L+RVCLL+ TK G+KP D
Sbjct: 435 FFRLASKLCLVDLPGYGFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLD 494
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+EL+ LMERS+T YQ+VLTKTD VFPIDVARRA++I+ESLK N S+V+PVMMVSSK+GAG
Sbjct: 495 YELVDLMERSKTPYQIVLTKTDLVFPIDVARRAVEIQESLKKNKSVVRPVMMVSSKTGAG 554
Query: 182 IRSLRTVLSKIARFAK 197
+R+LR VL KIARF K
Sbjct: 555 VRNLRGVLGKIARFIK 570
>gi|115456183|ref|NP_001051692.1| Os03g0816400 [Oryza sativa Japonica Group]
gi|28876002|gb|AAO60011.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108711752|gb|ABF99547.1| expressed protein [Oryza sativa Japonica Group]
gi|113550163|dbj|BAF13606.1| Os03g0816400 [Oryza sativa Japonica Group]
Length = 571
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/196 (80%), Positives = 180/196 (91%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAAK+SSSFP P LPEIAFAG SNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 375 NKLEFFAAAKISSSFPPPTLPEIAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 434
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +KLCLVDLPGYGFAYAK+EVKD+W+ELVKEYVSTRV L+RVCLL+ TK G+KP D
Sbjct: 435 FFRLASKLCLVDLPGYGFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLD 494
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+EL+ LMERS+T YQ+VLTKTD VFPIDVARRA++I+ESLK N S+V+PVMMVSSK+GAG
Sbjct: 495 YELVDLMERSKTPYQIVLTKTDLVFPIDVARRAVEIQESLKKNKSVVRPVMMVSSKTGAG 554
Query: 182 IRSLRTVLSKIARFAK 197
+R+LR VL KIARF K
Sbjct: 555 VRNLRGVLGKIARFIK 570
>gi|222626042|gb|EEE60174.1| hypothetical protein OsJ_13104 [Oryza sativa Japonica Group]
Length = 694
Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 158/196 (80%), Positives = 180/196 (91%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAAK+SSSFP P LPEIAFAG SNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 498 NKLEFFAAAKISSSFPPPTLPEIAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 557
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +KLCLVDLPGYGFAYAK+EVKD+W+ELVKEYVSTRV L+RVCLL+ TK G+KP D
Sbjct: 558 FFRLASKLCLVDLPGYGFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLD 617
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+EL+ LMERS+T YQ+VLTKTD VFPIDVARRA++I+ESLK N S+V+PVMMVSSK+GAG
Sbjct: 618 YELVDLMERSKTPYQIVLTKTDLVFPIDVARRAVEIQESLKKNKSVVRPVMMVSSKTGAG 677
Query: 182 IRSLRTVLSKIARFAK 197
+R+LR VL KIARF K
Sbjct: 678 VRNLRGVLGKIARFIK 693
>gi|242032515|ref|XP_002463652.1| hypothetical protein SORBIDRAFT_01g003620 [Sorghum bicolor]
gi|241917506|gb|EER90650.1| hypothetical protein SORBIDRAFT_01g003620 [Sorghum bicolor]
Length = 550
Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 158/196 (80%), Positives = 179/196 (91%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAAK+SSSFPAP LPEIAFAG SNVGKSS+LN+LTRQWGVVRTSDKPGLTQTIN
Sbjct: 354 NKLEFFAAAKISSSFPAPTLPEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTIN 413
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +KLCLVDLPGYGFAYAK+EVK++WEELVKEYVSTRV L+RVCLL+ TK G+KP D
Sbjct: 414 FFRLASKLCLVDLPGYGFAYAKDEVKESWEELVKEYVSTRVGLERVCLLVHTKRGMKPLD 473
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+EL+ LMER +T YQ+VLTKTD VFPIDVARRAM+I+ESLK N S+V PVMMVSSK+GAG
Sbjct: 474 YELVDLMERHKTPYQIVLTKTDLVFPIDVARRAMEIQESLKRNKSVVNPVMMVSSKTGAG 533
Query: 182 IRSLRTVLSKIARFAK 197
IR+LR VL K+ARF K
Sbjct: 534 IRNLRGVLGKLARFIK 549
>gi|414873600|tpg|DAA52157.1| TPA: hypothetical protein ZEAMMB73_811012 [Zea mays]
Length = 548
Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/196 (80%), Positives = 178/196 (90%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAAK+SSSFP P LPEIAFAG SNVGKSS+LN+LTRQWGVVRTSDKPGLTQTIN
Sbjct: 352 NKLEFFAAAKISSSFPTPTLPEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTIN 411
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +KLCLVDLPGYGFAYAK+EVK++WEELVKEYVSTRV L+RVCLL+ TK G+KP D
Sbjct: 412 FFQLASKLCLVDLPGYGFAYAKDEVKESWEELVKEYVSTRVGLERVCLLVHTKRGMKPLD 471
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+EL+ LMER +T YQ+VLTKTD VFPIDVARRAM+I+ESLK N S+V PVMMVSSK+GAG
Sbjct: 472 YELVDLMERHKTPYQIVLTKTDLVFPIDVARRAMEIQESLKRNKSVVNPVMMVSSKTGAG 531
Query: 182 IRSLRTVLSKIARFAK 197
IR+LR VL K+ARF K
Sbjct: 532 IRNLRGVLGKLARFIK 547
>gi|293336000|ref|NP_001168813.1| uncharacterized protein LOC100382617 [Zea mays]
gi|223973173|gb|ACN30774.1| unknown [Zea mays]
Length = 548
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/196 (79%), Positives = 178/196 (90%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAAK+SSSFP P LPEIAFAG SNVGKSS+LN+LTRQWGVVRTSDKPGLTQTIN
Sbjct: 352 NKLEFFAAAKISSSFPTPTLPEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTIN 411
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +KLCLVDLPGYGFAYAK+EVK++WEELVKEYVSTRV L+RVCLL+ TK G+KP D
Sbjct: 412 FFQLASKLCLVDLPGYGFAYAKDEVKESWEELVKEYVSTRVGLERVCLLVHTKRGMKPLD 471
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+EL+ LMER +T YQ+VLTKTD VFPIDVARRA++I+ESLK N S+V PVMMVSSK+GAG
Sbjct: 472 YELVDLMERHKTPYQIVLTKTDLVFPIDVARRAVEIQESLKRNKSVVNPVMMVSSKTGAG 531
Query: 182 IRSLRTVLSKIARFAK 197
IR+LR VL K+ARF K
Sbjct: 532 IRNLRGVLGKLARFIK 547
>gi|357124225|ref|XP_003563804.1| PREDICTED: uncharacterized protein LOC100834085 [Brachypodium
distachyon]
Length = 559
Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 154/196 (78%), Positives = 178/196 (90%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL+FFAAAK+SSSFP P +PEIAFAG SNVGKSS+LNALTRQWG+VRTSDKPGLTQ+IN
Sbjct: 363 NKLDFFAAAKISSSFPPPTIPEIAFAGVSNVGKSSLLNALTRQWGIVRTSDKPGLTQSIN 422
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +KLCLVDLPGYGFAYAKEEVK++W+ELVKEYVSTRV L RVCLL+ TK G+KP D
Sbjct: 423 FFRLASKLCLVDLPGYGFAYAKEEVKESWQELVKEYVSTRVGLDRVCLLVHTKRGMKPLD 482
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ELI LMERS+T YQ+VLTKTD VFPIDVARRAM+I+ESL+ N S+V+PVMMVSSK+GAG
Sbjct: 483 YELIDLMERSKTPYQIVLTKTDLVFPIDVARRAMEIQESLRKNKSVVKPVMMVSSKTGAG 542
Query: 182 IRSLRTVLSKIARFAK 197
IR+LR VL K+ RF K
Sbjct: 543 IRNLRGVLGKLVRFVK 558
>gi|18424095|ref|NP_568876.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
gi|14334980|gb|AAK59667.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
gi|17104637|gb|AAL34207.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
gi|332009660|gb|AED97043.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
Length = 446
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 160/173 (92%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAA VSSSFP PD+PEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 269 NKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 328
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG K+ LVDLPGYGFA+AK+EVK+AWE+LVKEYVSTR SLKRVCLL+DTKWG+KPRD
Sbjct: 329 FFGLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRD 388
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV 174
ELI+LMERS TKYQ+VLTKTD VFPIDVARRAMQIEE LKAN S+VQP+ +
Sbjct: 389 QELINLMERSNTKYQIVLTKTDVVFPIDVARRAMQIEEKLKANRSIVQPLWLT 441
>gi|359478497|ref|XP_002276707.2| PREDICTED: uncharacterized protein LOC100255308 [Vitis vinifera]
Length = 574
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/198 (78%), Positives = 171/198 (86%), Gaps = 3/198 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL FFAAA VSSSFP PDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 377 NKLTFFAAANVSSSFPPPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 436
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEY--VSTRVSLKRVCLLIDTKWGVKP 119
FFKLG+KL LVDLPGYGFAYAKEEVKD+WEELV EY +S S+K++C ++ W K
Sbjct: 437 FFKLGSKLSLVDLPGYGFAYAKEEVKDSWEELVNEYMIMSCFNSIKKICSEVNDSW-KKR 495
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
++ LI L R+QTKYQ++LTKTD VFPIDVARRAMQIEESLKAN S+VQP+MMVSSKSG
Sbjct: 496 KEKGLIFLFYRAQTKYQILLTKTDLVFPIDVARRAMQIEESLKANKSIVQPLMMVSSKSG 555
Query: 180 AGIRSLRTVLSKIARFAK 197
AGI SLRTVL KI RFAK
Sbjct: 556 AGIPSLRTVLGKIGRFAK 573
>gi|297745779|emb|CBI15835.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/222 (69%), Positives = 172/222 (77%), Gaps = 26/222 (11%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKL FFAAA VSSSFP PDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 173 NKLTFFAAANVSSSFPPPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 232
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEY--VSTRVSLKRVCLLIDTKWG--- 116
FFKLG+KL LVDLPGYGFAYAKEEVKD+WEELV EY +S S+K++C + +
Sbjct: 233 FFKLGSKLSLVDLPGYGFAYAKEEVKDSWEELVNEYMIMSCFNSIKKICSEVHKTFHNSI 292
Query: 117 -----------------VKPRDHEL----ISLMERSQTKYQVVLTKTDTVFPIDVARRAM 155
++ +D +L + L R+QTKYQ++LTKTD VFPIDVARRAM
Sbjct: 293 QHNIRNLMFCRMIIILFLERQDKDLLFYFVFLFYRAQTKYQILLTKTDLVFPIDVARRAM 352
Query: 156 QIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARFAK 197
QIEESLKAN S+VQP+MMVSSKSGAGI SLRTVL KI RFAK
Sbjct: 353 QIEESLKANKSIVQPLMMVSSKSGAGIPSLRTVLGKIGRFAK 394
>gi|168056123|ref|XP_001780071.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668474|gb|EDQ55080.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 305
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 137/191 (71%), Positives = 165/191 (86%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
KL F AAAKVS S P+ +LPEIAFAGRSNVGKSS++NALTRQWGVVRTSDKPG+TQ++NF
Sbjct: 108 KLTFAAAAKVSRSLPSLNLPEIAFAGRSNVGKSSLINALTRQWGVVRTSDKPGMTQSVNF 167
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F LG++LCLVDLPGYGFAYAKEE K+AWE+LVKEYV+TR LKRVCLL+D+KWG+KPRD
Sbjct: 168 FTLGSRLCLVDLPGYGFAYAKEEAKEAWEDLVKEYVTTRKILKRVCLLVDSKWGLKPRDE 227
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
ELI LME +QTKYQ+VLTKTD + P+D+ARRA QI+E+LK + L+ PV+MVSS++G GI
Sbjct: 228 ELIELMENAQTKYQIVLTKTDILPPLDLARRATQIQEALKHHKQLILPVLMVSSQTGGGI 287
Query: 183 RSLRTVLSKIA 193
LR L +A
Sbjct: 288 PHLRKALVNLA 298
>gi|10176792|dbj|BAA96928.2| unnamed protein product [Arabidopsis thaliana]
Length = 397
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 112/129 (86%), Positives = 122/129 (94%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NKLEFFAAA VSSSFP PD+PEIAFAGRSNVGKSS+LNALTRQWGVVRTSDKPGLTQTIN
Sbjct: 269 NKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTIN 328
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG K+ LVDLPGYGFA+AK+EVK+AWE+LVKEYVSTR SLKRVCLL+DTKWG+KPRD
Sbjct: 329 FFGLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRD 388
Query: 122 HELISLMER 130
ELI+LMER
Sbjct: 389 QELINLMER 397
>gi|302759126|ref|XP_002962986.1| hypothetical protein SELMODRAFT_77904 [Selaginella moellendorffii]
gi|302824628|ref|XP_002993956.1| hypothetical protein SELMODRAFT_137934 [Selaginella moellendorffii]
gi|300138228|gb|EFJ05003.1| hypothetical protein SELMODRAFT_137934 [Selaginella moellendorffii]
gi|300169847|gb|EFJ36449.1| hypothetical protein SELMODRAFT_77904 [Selaginella moellendorffii]
Length = 259
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 128/191 (67%), Gaps = 4/191 (2%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK F A AKV SS P +LPEIAFAGR+N GKS ++NALTRQ+G RTS KPG T +IN
Sbjct: 72 NKQVFVAGAKVLSSIPPAELPEIAFAGRTNSGKSKLINALTRQYGRARTSPKPGKTDSIN 131
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+ LG KLCLVD+PGY F Y K++ +L +Y++ R LKRVCLLID +WG++ +D
Sbjct: 132 FYVLGEKLCLVDMPGYSFMYGKQDQIQDLRQLNMDYITVRDHLKRVCLLIDAEWGIRQKD 191
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E I +E KYQ+VLTKTD V P+D+ RR QIEE+ MMVS+KSGAG
Sbjct: 192 QEFIDFLESVNRKYQIVLTKTDKVLPLDLGRRVTQIEEA----RIFSFLSMMVSAKSGAG 247
Query: 182 IRSLRTVLSKI 192
I R L+ +
Sbjct: 248 IGKFRMALASL 258
>gi|328866113|gb|EGG14499.1| Putative GTP-binding protein [Dictyostelium fasciculatum]
Length = 525
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Query: 3 KLEFFAAAKVSSSF-PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
K +F AAK S P D PE+AF GRSNVGKSS++NA+T + G+ +TSDKPGLTQ+IN
Sbjct: 279 KFKFIGAAKKEDSLLPESDTPEVAFIGRSNVGKSSLINAITLR-GLAKTSDKPGLTQSIN 337
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+F+LG+ L LVDLPGYGFA+AK+E D W +L Y+++R SLKRV +LID++ G K D
Sbjct: 338 WFELGSTLRLVDLPGYGFAFAKQEKSDTWNQLSVNYLTSRKSLKRVFVLIDSRHGFKDSD 397
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+L+ +++++ T Q+VLTKTD +D+A+R + +K + P++MVSSK+ G
Sbjct: 398 RQLLDILDKNHTHTQIVLTKTDLSEQLDLAKRFTLVANEIKHYRHVQDPILMVSSKTYKG 457
Query: 182 IRSLRTVL 189
I L T++
Sbjct: 458 IAELDTII 465
>gi|281203975|gb|EFA78171.1| Putative GTP-binding protein [Polysphondylium pallidum PN500]
Length = 441
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 129/187 (68%), Gaps = 1/187 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K + A+AK SF LPE+AF GRSNVGKSS++NA+T Q G +TSDKPG TQ+IN+
Sbjct: 198 KFVYVASAKSKESFIPEKLPEVAFIGRSNVGKSSIINAIT-QRGQAKTSDKPGFTQSINW 256
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
++LG+ L +VDLPGYGFA+AK + D W +L EY++TR SLKRV LL+D + G+K DH
Sbjct: 257 YELGSTLYIVDLPGYGFAFAKSQKVDQWNQLTLEYLTTRKSLKRVFLLLDARHGLKESDH 316
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++++ K Q+VLTK D V ++A+R + E LK + PV+ VSSK+ GI
Sbjct: 317 EILEILDKEHVKTQIVLTKGDLVEQKEIAKRFTLVTEELKKYHHTQLPVISVSSKTFGGI 376
Query: 183 RSLRTVL 189
L +++
Sbjct: 377 PELASLI 383
>gi|288957365|ref|YP_003447706.1| GTP-binding protein [Azospirillum sp. B510]
gi|288909673|dbj|BAI71162.1| GTP-binding protein [Azospirillum sp. B510]
Length = 227
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 125/193 (64%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A + P DLPE+AFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF
Sbjct: 35 DFVWGANALNQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFN 94
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG +L LVD+PGYG+A +E +AW ++V+ ++ RV+L+R +LID++ G+KP DHE+
Sbjct: 95 LGDRLKLVDMPGYGYAKESKEKVEAWNDMVRRFLRGRVTLRRALVLIDSRHGLKPNDHEI 154
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ +++R+ Y VVLTK D V D+ + E LK + + + + SS+ G GI
Sbjct: 155 MEMLDRTAVPYVVVLTKADKVKEADLDKVRRATELGLKKHPAAFPDIHVTSSEKGLGIAE 214
Query: 185 LRTVLSKIARFAK 197
LR L+ +A A+
Sbjct: 215 LRASLASLALVAE 227
>gi|304322174|ref|YP_003855817.1| GTP-binding protein [Parvularcula bermudensis HTCC2503]
gi|303301076|gb|ADM10675.1| GTP-binding protein [Parvularcula bermudensis HTCC2503]
Length = 213
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 123/189 (65%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F ++ P PDLPE AFAGRSNVGKSS++N LT + + RTS+ PG T+ +NFF
Sbjct: 23 QFMLGVTTMAALPPPDLPEFAFAGRSNVGKSSLINRLTGRKALARTSNTPGRTRELNFFD 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG +L LVDLPGYG+A A ++W L ++++ R +L+RV +L+D++ G+KP D E
Sbjct: 83 LGGRLRLVDLPGYGYAKASRSAVESWTGLTRDFLRGRPNLRRVHILVDSRHGLKPVDEET 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+SL++ S YQ+VLTK D + P + ARR + E++ + ++ SS++G GI +
Sbjct: 143 MSLLDESAVPYQLVLTKIDKIKPTEAARRIKAVGEAIGRRPAAHPDIIATSSETGDGIAA 202
Query: 185 LRTVLSKIA 193
LR ++ IA
Sbjct: 203 LREGMTSIA 211
>gi|340029432|ref|ZP_08665495.1| GTP-binding protein YsxC [Paracoccus sp. TRP]
Length = 216
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 123/189 (65%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F PA D PE+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ IN+F
Sbjct: 27 VDFLKGVVAMDGLPAADRPEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINYF 86
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
KLG + LVDLPGYGFA A V W+ L+K Y+S R +L+R LID++ GVK DH+
Sbjct: 87 KLGDRAYLVDLPGYGFAKAPVAVVAKWQALLKSYLSGRPTLRRAFALIDSRHGVKDVDHQ 146
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ L++R+ +QVVLTK D + +A Q++E+L+ + + +++ SS G GI
Sbjct: 147 IMQLLDRAAVPFQVVLTKADKITAQQLAATIEQVQEALQKHPAAFPQLVVTSSDKGLGIV 206
Query: 184 SLRTVLSKI 192
+LRT+++ +
Sbjct: 207 TLRTIIAGL 215
>gi|330799251|ref|XP_003287660.1| hypothetical protein DICPUDRAFT_151784 [Dictyostelium purpureum]
gi|325082338|gb|EGC35823.1| hypothetical protein DICPUDRAFT_151784 [Dictyostelium purpureum]
Length = 1674
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K++ +AK SF LPE+AF GRSNVGKSS++NALT Q G+ +TSDKPG TQ+IN+
Sbjct: 1441 KMKLIGSAKSLHSFLPETLPEVAFIGRSNVGKSSLINALT-QRGMAKTSDKPGFTQSINW 1499
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+++G+ L LVDLPGYGFA+AK+ ++WE + EY++TR +LK V +L+D + G+K D
Sbjct: 1500 YEIGSTLYLVDLPGYGFAFAKDVKLESWENITHEYLTTRKTLKCVYILVDARHGLKDSDR 1559
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
L+ +++ + K +VLTK D V I++A+R + LK + + P++ VSS+S AG+
Sbjct: 1560 TLLLELDKKKIKTHIVLTKADLVLQINLAKRIQITTDELKNYHHSILPIITVSSRSLAGV 1619
Query: 183 RSL 185
L
Sbjct: 1620 ADL 1622
>gi|374290988|ref|YP_005038023.1| putative GTP-binding protein [Azospirillum lipoferum 4B]
gi|357422927|emb|CBS85769.1| putative GTP-binding protein [Azospirillum lipoferum 4B]
Length = 227
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 118/178 (66%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A + P DLPE+AFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF
Sbjct: 35 DFVWGANALNQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFN 94
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG +L LVD+PGYG+A +E +AW ++V+ ++ RV+L+R +LID++ G+KP DHE+
Sbjct: 95 LGNRLKLVDMPGYGYAKESKEKVEAWNDMVRRFLRGRVTLRRALVLIDSRHGLKPNDHEI 154
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ +++R+ Y VVLTK D V P ++ + + LK + + + + SS+ G GI
Sbjct: 155 MEMLDRTAVPYVVVLTKADKVKPTELDKIRHDTQAGLKKHPAAFPDIHVTSSEKGTGI 212
>gi|407780970|ref|ZP_11128190.1| GTP-binding protein YsxC [Oceanibaculum indicum P24]
gi|407208396|gb|EKE78314.1| GTP-binding protein YsxC [Oceanibaculum indicum P24]
Length = 218
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F AA P LPEIAFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF L
Sbjct: 28 FVAATTTLDRLPPDSLPEIAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTQQLNFFDL 87
Query: 66 GTKLCLVDLPGYGFA-YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPG+GFA +K +V+D W LVK+Y+ RVSL+RVCLL+D + G+K D E+
Sbjct: 88 GHRLLLVDLPGHGFAKVSKTQVRD-WTRLVKDYLRGRVSLRRVCLLVDARHGLKDNDREV 146
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++LM+++ YQVVLTKTD P ++ ++ L + + S+ +G GI
Sbjct: 147 MALMDQAAVVYQVVLTKTDKTKPAELQATLDKLSAELSKRVAAYPVLFPTSAVNGEGIPE 206
Query: 185 LRTVLSKIA 193
LR L+ +A
Sbjct: 207 LRAELATLA 215
>gi|209965569|ref|YP_002298484.1| ribosome biogenesis GTP-binding protein YsxC [Rhodospirillum
centenum SW]
gi|209959035|gb|ACI99671.1| GTP-binding protein, putative [Rhodospirillum centenum SW]
Length = 224
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 120/188 (63%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
FF A +S P DLPE+ FAGRSNVGKSS++NALT + + RTS PG TQ +NFF L
Sbjct: 33 FFWGAPAASELPEADLPEVCFAGRSNVGKSSLVNALTGRVTLARTSQTPGRTQQLNFFNL 92
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G +L LVD+PGYG+A +E AW + K Y+ RV+L+R +L+D++ G+KP+D +++
Sbjct: 93 GDRLVLVDMPGYGYAKVSKETSSAWTDFAKSYLKGRVTLRRALVLVDSRHGLKPQDIDMM 152
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+M+++ YQ+VLTK D + + + +L + + VM SS+SG GI L
Sbjct: 153 KMMDQAAVAYQIVLTKADKLTDKALVHARAAVAAALVKHPAAHPEVMATSSESGLGIAEL 212
Query: 186 RTVLSKIA 193
R L+++A
Sbjct: 213 RATLTRLA 220
>gi|392381242|ref|YP_005030439.1| putative GTP-binding protein [Azospirillum brasilense Sp245]
gi|356876207|emb|CCC96970.1| putative GTP-binding protein [Azospirillum brasilense Sp245]
Length = 220
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 126/192 (65%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P DLPE+AFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF
Sbjct: 29 DFIWGAQTAEQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFN 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG +L LVD+PGYG+A +E + W ++V+ ++ RV+L+R +L+D++ G+KP D E+
Sbjct: 89 LGNRLKLVDMPGYGYAKESKEKIELWNDMVRRFLRGRVTLRRALVLVDSRHGLKPNDEEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+++++++ Y VVLTK+D V ++A + + +LK + + + SS+ G GI
Sbjct: 149 MTMLDQAAVPYVVVLTKSDKVRSQELAEVSKRTVAALKKHPAAFPEIHATSSEKGQGIAE 208
Query: 185 LRTVLSKIARFA 196
LR L+++A
Sbjct: 209 LRASLAQLANLG 220
>gi|346991300|ref|ZP_08859372.1| GTP-binding protein YsxC [Ruegeria sp. TW15]
Length = 217
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 120/188 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF PAPD E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ INFF
Sbjct: 29 EFVKGVVAMDGLPAPDRLEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFT 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPGYG+A A +V + W+ L+K+Y+S R +L+R +LID++ GVKP D E+
Sbjct: 89 QGLELYLVDLPGYGYANAPVKVVEKWQRLLKKYLSGRQTLRRAFVLIDSRHGVKPVDAEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ S +Q VLTK D V D + Q+ +L + + +++ SS+ G GI +
Sbjct: 149 MKLLDTSAVTFQCVLTKADKVKANDREKVLQQVRSALAKHPAAFPEIVLTSSEKGDGIPT 208
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 209 LRSIIAHL 216
>gi|254509788|ref|ZP_05121855.1| GTP-binding protein [Rhodobacteraceae bacterium KLH11]
gi|221533499|gb|EEE36487.1| GTP-binding protein [Rhodobacteraceae bacterium KLH11]
Length = 217
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 120/188 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + P PD E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ INFF
Sbjct: 29 EFVKGVVAMNGLPVPDRLEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFT 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPGYG+A A +V + W+ L+K+Y+S R +L+R +LID++ GVKP D E+
Sbjct: 89 QGPELYLVDLPGYGYANAPVKVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHGVKPVDAEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ S +Q VLTK D V D + Q+ SL + + +++ SS+ G GI +
Sbjct: 149 MKLLDTSAVTFQCVLTKADKVKAKDQEKVLDQVRASLAKHPAAFPEIVLTSSEKGDGIPT 208
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 209 LRSIIAHL 216
>gi|258541763|ref|YP_003187196.1| ribosome biogenesis GTP-binding protein YsxC [Acetobacter
pasteurianus IFO 3283-01]
gi|384041684|ref|YP_005480428.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|384050199|ref|YP_005477262.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|384053309|ref|YP_005486403.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|384056541|ref|YP_005489208.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|384059182|ref|YP_005498310.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|384062476|ref|YP_005483118.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|384118552|ref|YP_005501176.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421848409|ref|ZP_16281397.1| GTP-binding protein [Acetobacter pasteurianus NBRC 101655]
gi|421852390|ref|ZP_16285079.1| GTP-binding protein [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|256632841|dbj|BAH98816.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635898|dbj|BAI01867.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638953|dbj|BAI04915.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642007|dbj|BAI07962.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645062|dbj|BAI11010.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648117|dbj|BAI14058.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651170|dbj|BAI17104.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654161|dbj|BAI20088.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|371460770|dbj|GAB26600.1| GTP-binding protein [Acetobacter pasteurianus NBRC 101655]
gi|371479470|dbj|GAB30282.1| GTP-binding protein [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 227
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 125/189 (66%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF A+ P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +NFF
Sbjct: 34 EFVFGAQKLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFN 93
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L +L LVD+PGYG+A A + VK+ W++++ +Y+ R SL+RV LL+D + +K D E+
Sbjct: 94 LADRLMLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVEMKAHDLEV 153
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++++ +QVVLTK D+V P +AR+ ++E ++ + + + + SS++G GI
Sbjct: 154 MDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEAEIRRHPAAFPYLSLTSSQTGEGIEG 213
Query: 185 LRTVLSKIA 193
LR L++ A
Sbjct: 214 LRAELAEFA 222
>gi|329114453|ref|ZP_08243215.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001]
gi|326696529|gb|EGE48208.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001]
Length = 227
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 125/189 (66%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF A+ P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +NFF
Sbjct: 34 EFVFGAQRLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFN 93
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L +L LVD+PGYG+A A + VK+ W++++ +Y+ R SL+RV LL+D + +K D E+
Sbjct: 94 LADRLMLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVEMKAHDLEV 153
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++++ +QVVLTK D+V P +AR+ ++E ++ + + + + SS++G GI
Sbjct: 154 MDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEAEIRRHPAAFPYLSLTSSQTGEGIEG 213
Query: 185 LRTVLSKIA 193
LR L++ A
Sbjct: 214 LRAELAEFA 222
>gi|303278466|ref|XP_003058526.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459686|gb|EEH56981.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 523
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 123/188 (65%), Gaps = 4/188 (2%)
Query: 6 FFAAAKVSSSFPAPD-LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F AA S P PD +PE+AFAGRSNVGKSS++NA+T R+SD PG TQ++NF+
Sbjct: 218 FTHAATNEDSLPPPDDVPEVAFAGRSNVGKSSLINAITLS-AAARSSDVPGKTQSLNFYD 276
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L +VD+PGYGFA+A + DAW L+ +Y++ R +LKRV ++ID + G+K D E+
Sbjct: 277 VSRRLRIVDMPGYGFAFAAPDRVDAWNRLIDKYLTGRANLKRVYVVIDARHGLKAPDREM 336
Query: 125 ISLMER-SQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ + + YQVVL KTD V P D+ARRA I E L+ + V M S+ +GAG+R
Sbjct: 337 LAFLSKYGGVSYQVVLNKTDLVKPGDLARRAFLIREELRLSKRARGIVDMASTSTGAGVR 396
Query: 184 SL-RTVLS 190
R +LS
Sbjct: 397 DFARGLLS 404
>gi|114765425|ref|ZP_01444540.1| GTP-binding protein [Pelagibaca bermudensis HTCC2601]
gi|114542268|gb|EAU45298.1| GTP-binding protein [Roseovarius sp. HTCC2601]
Length = 217
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 119/191 (62%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+++F P D E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ IN
Sbjct: 26 GEVDFLKGVVGMDGLPPDDRVEVCFAGRSNVGKSSLINALTGRKGIARASNTPGRTQEIN 85
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG + LVDLPGYGFA A V + W+ L+K+Y+S RVSL+R +LID + GVKP D
Sbjct: 86 FFTLGEERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRVSLRRAFVLIDARHGVKPVD 145
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E+++L++RS +Q VLTK D V + Q+ E L + + +++ SS+ G G
Sbjct: 146 EEIMTLLDRSAVTFQAVLTKADKVKEKGREKVLAQVREKLAKHPAAFPELVLTSSEKGDG 205
Query: 182 IRSLRTVLSKI 192
I LR +++ +
Sbjct: 206 IALLRAIIAGL 216
>gi|260432490|ref|ZP_05786461.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416318|gb|EEX09577.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter
lacuscaerulensis ITI-1157]
Length = 214
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 120/188 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + PAPD E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ INFF
Sbjct: 26 EFVKGVVAMNGLPAPDRLEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFT 85
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G L LVDLPGYG+A A +V + W+ L+K+Y+S R +L+R +LID++ GVKP D E+
Sbjct: 86 QGPDLYLVDLPGYGYANAPVKVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHGVKPVDDEI 145
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ S +Q V+TK D V D + Q+ +L + + +++ SS+ G GI +
Sbjct: 146 MKLLDTSAVTFQCVMTKADKVKAKDREKVLGQVRGALSKHPAAYPEIVLTSSEKGDGIPT 205
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 206 LRSIIANL 213
>gi|217977386|ref|YP_002361533.1| ribosome biogenesis GTP-binding protein YsxC [Methylocella
silvestris BL2]
gi|217502762|gb|ACK50171.1| GTP-binding protein HSR1-related [Methylocella silvestris BL2]
Length = 226
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 124/198 (62%), Gaps = 11/198 (5%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+ +F AA +S P P PEIAFAGRSNVGKSS+LNALT + + RTS PG T+ +NF
Sbjct: 26 ECDFLWAASSVASLPPPGAPEIAFAGRSNVGKSSLLNALTNRKSLARTSHTPGRTRELNF 85
Query: 63 FKLG-----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
F LG +L LVD+PGYG+A A +E +W +L+++Y+ R L R +LID + G+
Sbjct: 86 FGLGGGIDDARLRLVDMPGYGYAAASKEQIASWTQLMQDYLRGRAPLLRAFVLIDGRHGL 145
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA---NNSLVQPVMMV 174
KP D+E++ L++R YQ+VLTK D V D ARR IEE+LKA + +
Sbjct: 146 KPPDYEMMDLLDRCALSYQIVLTKQDEVKEADAARR---IEETLKAIEKRPAAYPQAIFT 202
Query: 175 SSKSGAGIRSLRTVLSKI 192
SS++ G+ LR ++++
Sbjct: 203 SSRTADGVAELRAAIARL 220
>gi|255076201|ref|XP_002501775.1| predicted protein [Micromonas sp. RCC299]
gi|226517039|gb|ACO63033.1| predicted protein [Micromonas sp. RCC299]
Length = 430
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 120/182 (65%), Gaps = 4/182 (2%)
Query: 5 EFFAAAKVSSSFPAPD--LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+F AAA + P D +PE+AFAGRSNVGKSS++NA+T G R+SD PG TQ++NF
Sbjct: 207 KFVAAATTENDLPEADDDIPEVAFAGRSNVGKSSLINAVT-CSGAARSSDVPGKTQSLNF 265
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ + ++ ++D+PGYGFA+A +E +AW L+ +Y++ R +LKRV +++D + G+K D
Sbjct: 266 YDVSRRIRIIDMPGYGFAFAAQEKVEAWNRLMDKYLTGRKNLKRVYVVVDARHGLKAPDR 325
Query: 123 ELISLMER-SQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E+++ + R Y VVL KTD V P D+ARR I E L+ V M+S+ +GAG
Sbjct: 326 EMLAFLSRYGNVAYSVVLNKTDLVRPADLARRCFLIREELRMAKRARSTVHMLSTNTGAG 385
Query: 182 IR 183
+R
Sbjct: 386 VR 387
>gi|99080146|ref|YP_612300.1| ribosome biogenesis GTP-binding protein YsxC [Ruegeria sp. TM1040]
gi|119369260|sp|Q1GJX8.1|ENGB_SILST RecName: Full=Probable GTP-binding protein EngB
gi|99036426|gb|ABF63038.1| GTP-binding [Ruegeria sp. TM1040]
Length = 216
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 120/188 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ INFF
Sbjct: 28 EFLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPGYG+A A V + W+ L+K+Y+S R +L+R +LIDT+ GVK D E+
Sbjct: 88 QGPELYLVDLPGYGYANAPLAVVEKWQRLLKQYLSGRQTLRRAFVLIDTRHGVKKVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ S +QVV+TK D V D A+ Q+ ++L + + +++ SS+ G GI +
Sbjct: 148 MKLLDTSAVTFQVVMTKADKVKEKDRAKILDQVRDALSKHPAAYPEIVLTSSEKGDGIAT 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIIAHL 215
>gi|339022174|ref|ZP_08646137.1| GTP-binding protein [Acetobacter tropicalis NBRC 101654]
gi|338750807|dbj|GAA09441.1| GTP-binding protein [Acetobacter tropicalis NBRC 101654]
Length = 227
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +NFF
Sbjct: 33 DFIFGAQKLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFN 92
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L +L LVD+PGYG+A A + VK+ W+E++ +Y+ R LKRV LL+D + +KP D E+
Sbjct: 93 LADRLMLVDMPGYGYAKAAKSVKEDWQEMMFDYLRGRPGLKRVMLLLDARIELKPHDEEV 152
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++R+ +Q+VLTK D V P +AR+ I + + + + + SS++G GI
Sbjct: 153 MKLLDRAAVSFQIVLTKCDAVKPAPLARKEEAILAVARRHAAACPFLSLSSSETGQGIEQ 212
Query: 185 LRTVLSKIA 193
LR L++ A
Sbjct: 213 LRAELAEFA 221
>gi|119383630|ref|YP_914686.1| ribosome biogenesis GTP-binding protein YsxC [Paracoccus
denitrificans PD1222]
gi|119373397|gb|ABL68990.1| small GTP-binding protein [Paracoccus denitrificans PD1222]
Length = 216
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 118/189 (62%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F P D PE+ FAGRSN GKSS++NALT + + R S+ PG TQ IN+F
Sbjct: 27 VDFLKGVVAMDGLPPADRPEVCFAGRSNAGKSSLINALTGRKSLARASNTPGRTQEINYF 86
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LG + LVDLPGYGFA A V W+ L+K Y+S R +L+R LID++ GVK DHE
Sbjct: 87 TLGERAYLVDLPGYGFAKAPVAVVAKWQALLKNYLSGRPTLRRAFTLIDSRHGVKDVDHE 146
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ L++RS +QVVLTK D + + Q++E+L+ + + +++ SS+ G GI
Sbjct: 147 IMKLLDRSAVPFQVVLTKADKIGAQAMEATVAQVQEALQKHPAAYPELVITSSEKGQGIA 206
Query: 184 SLRTVLSKI 192
+LR +++ +
Sbjct: 207 TLRAIIASL 215
>gi|308807338|ref|XP_003080980.1| Predicted GTPase (ISS) [Ostreococcus tauri]
gi|116059441|emb|CAL55148.1| Predicted GTPase (ISS) [Ostreococcus tauri]
Length = 444
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 116/164 (70%), Gaps = 2/164 (1%)
Query: 20 DLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
D+PEIAFAGRSNVGKSS++NALT V R+SD PG TQ++NF+ LG ++ LVDLPGYGF
Sbjct: 161 DVPEIAFAGRSNVGKSSLINALTLS-SVARSSDVPGKTQSLNFYSLGERIRLVDLPGYGF 219
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMER-SQTKYQVV 138
A+AK+ + W EL+ Y+++R +LKRV +++D + G+K D E+++ + + +T+ V+
Sbjct: 220 AFAKQARVETWNELMDRYLTSRPNLKRVYIVVDARHGLKASDREMLAFLSKYGETQCAVI 279
Query: 139 LTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
L K D V P D+ARRA I+E L+ V+M S+ +GAG+
Sbjct: 280 LNKCDCVNPNDLARRAYLIQEELRYTKRARTLVLMASTSTGAGV 323
>gi|259415701|ref|ZP_05739621.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter sp.
TrichCH4B]
gi|259347140|gb|EEW58917.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter sp.
TrichCH4B]
Length = 216
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 120/188 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ INFF
Sbjct: 28 EFLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPGYG+A A V + W+ L+K+Y+S R +L+R +LIDT+ GVK D E+
Sbjct: 88 QGPELYLVDLPGYGYANAPLAVVEKWQRLLKQYLSGRQTLRRAFVLIDTRHGVKKVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ + +QVV+TK D V D A+ Q+ ++L + + +++ SS+ G GI +
Sbjct: 148 MKLLDSAAVTFQVVMTKADKVKEKDRAKILDQVRDALSKHPAAYPEIVLTSSEKGDGIAT 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIIAHL 215
>gi|330993394|ref|ZP_08317329.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1]
gi|329759424|gb|EGG75933.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1]
Length = 221
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 122/192 (63%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ F A+ P P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 26 GEFNFVFGAQKLGQLPDPILPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLN 85
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF++ +L LVD+PGYGFA A VK+ W+ ++ Y+ R +L+RV LL+D++ VK D
Sbjct: 86 FFEMAHRLTLVDMPGYGFAKAARAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKASD 145
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ +++R+ +QVVLTK D P +A + ++ E + + + V+ SS++G G
Sbjct: 146 REIMKMLDRAAVTFQVVLTKCDVPKPNALAAKLREVSEIVATHAAAFPHVLATSSETGLG 205
Query: 182 IRSLRTVLSKIA 193
I LR L+++A
Sbjct: 206 IEDLRAELARLA 217
>gi|255262598|ref|ZP_05341940.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp.
R2A62]
gi|255104933|gb|EET47607.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp.
R2A62]
Length = 217
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 120/188 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F S P PD E+ FAGRSNVGKS+++NALT + G+ R S+ PG TQ IN+F
Sbjct: 29 DFVKGVVAMSGLPDPDRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEINYFT 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+G LVDLPGYGFA A V + W+ L+K+Y+S R +L+R +LID + GVKP D E+
Sbjct: 89 MGEHGYLVDLPGYGFANAPLTVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKPVDDEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+SL++ + +Q VLTK D V + R Q+ +L + + +++ SS+ G GI++
Sbjct: 149 MSLLDSAAVTFQAVLTKADKVKLKERERIMDQVRGALAKHPAAYPEIVLTSSEKGDGIKT 208
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 209 LRSIIAGL 216
>gi|145350092|ref|XP_001419457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579688|gb|ABO97750.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 416
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 117/164 (71%), Gaps = 2/164 (1%)
Query: 20 DLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
D+PEIAFAGRSNVGKSS++NALT V R+SD PG TQ++NF+ + ++ LVDLPGYGF
Sbjct: 105 DVPEIAFAGRSNVGKSSLINALTLS-SVARSSDVPGKTQSLNFYSMDERIRLVDLPGYGF 163
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMER-SQTKYQVV 138
A+AK+ ++W EL+ +Y+++R +LKRV L+ID + G+K D E+++ + + +T+ V+
Sbjct: 164 AFAKQHRVESWNELMDKYLTSRPNLKRVYLVIDARHGMKASDREMLAFLSKYGETQCGVI 223
Query: 139 LTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
L K D V P ++ARRA I+E L+ V+M S+ +GAG+
Sbjct: 224 LNKCDYVNPNELARRAYLIQEELRYTKRARTMVLMASTSTGAGV 267
>gi|260427039|ref|ZP_05781018.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45]
gi|260421531|gb|EEX14782.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45]
Length = 217
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 120/191 (62%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+++F P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ IN
Sbjct: 26 GEVDFLKGVVAMDGLPPDDRTEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEIN 85
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG + LVDLPGYGFA A V + W+ L+K+Y+S R SL+R +LID++ GVK D
Sbjct: 86 FFTLGEERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRASLRRAFVLIDSRHGVKAVD 145
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E+++L++RS +Q VLTK+D + + + Q+ E L + + +++ SS+ G G
Sbjct: 146 EEIMTLLDRSAVTFQAVLTKSDKIREKEREKVLDQVREKLSKHPAAYPELVLTSSEKGDG 205
Query: 182 IRSLRTVLSKI 192
I +LR +++ +
Sbjct: 206 IATLRAIIAGL 216
>gi|182680231|ref|YP_001834377.1| ribosome biogenesis GTP-binding protein YsxC [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636114|gb|ACB96888.1| GTP-binding protein HSR1-related [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 244
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 117/192 (60%), Gaps = 5/192 (2%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
FF A S P PEIAFAGRSNVGKSS+LNALT + + RTS PG TQ +NFF L
Sbjct: 40 FFWGAAARSQLPPEGAPEIAFAGRSNVGKSSLLNALTGRKTLARTSHTPGRTQELNFFAL 99
Query: 66 G-----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
G ++ LVD+PGYG+A A +E AW L ++++ RV L RV +LID + G+KP
Sbjct: 100 GPTIESARMRLVDMPGYGYAAASKEKIAAWTSLCRDFLRGRVPLLRVYVLIDGRHGLKPI 159
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + L+++S YQ+VLTK D V + A R ++ +L + V+ SS+SG
Sbjct: 160 DSETLDLLDQSAISYQIVLTKRDEVKKSEQAARIASVKAALAKRPAAYPDVIFTSSQSGE 219
Query: 181 GIRSLRTVLSKI 192
GI LR ++++
Sbjct: 220 GIADLRAAIARL 231
>gi|126728215|ref|ZP_01744031.1| GTP-binding protein [Sagittula stellata E-37]
gi|126711180|gb|EBA10230.1| GTP-binding protein [Sagittula stellata E-37]
Length = 216
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 122/192 (63%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ +++F P D E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ I
Sbjct: 24 VGEVDFLKGVVAMDGLPPDDRAEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEI 83
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N+F LG++ LVDLPGYGFA A V W+ L+K Y++ RVSL+R +LID + GVK
Sbjct: 84 NYFTLGSERYLVDLPGYGFANAPVAVVAKWQALLKAYLAGRVSLRRAFVLIDHRHGVKAV 143
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D+E+++L++RS +QVV+TK D V + + Q+ L + + +++ SS+ G
Sbjct: 144 DNEIMTLLDRSAVTFQVVMTKADKVKGAEHDKILEQVRGQLAKHPAAYPEIVVTSSEKGD 203
Query: 181 GIRSLRTVLSKI 192
GI +LR++++ +
Sbjct: 204 GIGTLRSIIATL 215
>gi|349700018|ref|ZP_08901647.1| GTP-binding protein YsxC [Gluconacetobacter europaeus LMG 18494]
Length = 221
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 121/192 (63%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ F A+ P P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 27 GEFRFVFGAQQLGQLPDPVLPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLN 86
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +L LVD+PGYGFA A + VK+ W+ ++ Y+ R +L+RV LL+D++ VK D
Sbjct: 87 FFELADRLTLVDMPGYGFAKAAKAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKATD 146
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ L++R+ +QVVLTK D P + + ++ + + + V+ SS++G G
Sbjct: 147 QEIMKLLDRAAVTFQVVLTKCDVPKPAMLEAKMREVTAIVATHAAAFPDVLATSSETGEG 206
Query: 182 IRSLRTVLSKIA 193
I LR L+++A
Sbjct: 207 IAELRAELARLA 218
>gi|310816970|ref|YP_003964934.1| GTP-binding protein HSR1-like protein [Ketogulonicigenium vulgare
Y25]
gi|385234555|ref|YP_005795897.1| GTPase EngB [Ketogulonicigenium vulgare WSH-001]
gi|308755705|gb|ADO43634.1| GTP-binding protein HSR1-related protein [Ketogulonicigenium
vulgare Y25]
gi|343463466|gb|AEM41901.1| GTPase EngB [Ketogulonicigenium vulgare WSH-001]
Length = 216
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 122/189 (64%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F S P D EI FAGRSNVGKSS++NALT + + R S+ PG TQ +NFF
Sbjct: 27 VDFVKGVVAMSGLPPADRVEICFAGRSNVGKSSLINALTGRKSLARASNTPGRTQELNFF 86
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LG +VDLPGYG+A A V + W++L+K Y+S R +L+R +LID++ GVK D E
Sbjct: 87 ALGEDRYMVDLPGYGYANAPLAVVEKWQKLLKSYLSGRQTLRRAFVLIDSRHGVKSVDDE 146
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+++L+++S +QVV+TK D V ++A Q++ +LK + + V++ SS+ G GI
Sbjct: 147 IMNLLDKSAVTFQVVMTKADKVSKAELAANFEQVKGALKKHPAAYPEVVLTSSEKGDGIE 206
Query: 184 SLRTVLSKI 192
+LR +++ +
Sbjct: 207 TLRAIIAGL 215
>gi|66818499|ref|XP_642909.1| hypothetical protein DDB_G0276985 [Dictyostelium discoideum AX4]
gi|60471024|gb|EAL68994.1| hypothetical protein DDB_G0276985 [Dictyostelium discoideum AX4]
Length = 743
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 124/189 (65%), Gaps = 2/189 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K++F AAK SF LPE+AF GRSNVGKSS++NALT Q G+ +TSDKPG TQ+IN
Sbjct: 256 SKMKFIGAAKNIDSFLPETLPEVAFIGRSNVGKSSLINALT-QRGLAKTSDKPGQTQSIN 314
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+F+LG+ L LVDLPGYGFA+AKE + + W ++ Y++ R + V +LID++ G+K D
Sbjct: 315 WFELGSTLYLVDLPGYGFAFAKETLVEQWSDITIHYLTERKCISCVFILIDSRHGLKDSD 374
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSL-VQPVMMVSSKSGA 180
L+ +++ + K ++LTK D P D+ +R + ++ N PV+ +SSK+ +
Sbjct: 375 RNLLLELDKKKIKTHIILTKADLTKPEDLVKRISITNQEIQTNYRYSTTPVLPISSKNLS 434
Query: 181 GIRSLRTVL 189
GI L ++
Sbjct: 435 GISDLSKLI 443
>gi|349686494|ref|ZP_08897636.1| GTP-binding protein YsxC [Gluconacetobacter oboediens 174Bp2]
Length = 222
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 121/192 (63%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ F A+ P P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 28 GEFNFVFGAQKLGQLPDPVLPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLN 87
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +L LVD+PGYGFA A + VK+ W+ ++ Y+ R +L+RV LL+D++ VK D
Sbjct: 88 FFELADRLTLVDMPGYGFAKAAKAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKATD 147
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ +++R+ +QVVLTK D P + + ++ + + + V+ SS++G G
Sbjct: 148 QEIMKMLDRAAVTFQVVLTKCDVPKPAVLEAKLREVTGIVATHAAAYPHVLATSSETGMG 207
Query: 182 IRSLRTVLSKIA 193
I LR L+++A
Sbjct: 208 IEDLRAELARLA 219
>gi|84685376|ref|ZP_01013274.1| GTP-binding protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666533|gb|EAQ13005.1| GTP-binding protein [Rhodobacterales bacterium HTCC2654]
Length = 218
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 116/188 (61%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F + P D E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ INFF
Sbjct: 30 DFLKGVVAMNGLPPDDRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFT 89
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LVDLPGYGFA A V + W++L+K Y+S R SL+R +LIDT+ G+K D E+
Sbjct: 90 TTDGPYLVDLPGYGFANAPVAVVEKWQKLLKSYLSGRASLRRAFVLIDTRHGIKAVDEEI 149
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++L+++S +Q VLTK D V D + Q+ E L + + ++M SS+ G GI +
Sbjct: 150 MTLLDKSAVTFQAVLTKADKVKAADRDKILKQVREKLSKHPAAYPELVMTSSEKGDGIAT 209
Query: 185 LRTVLSKI 192
LR +++ +
Sbjct: 210 LRAIIAGL 217
>gi|87198603|ref|YP_495860.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium
aromaticivorans DSM 12444]
gi|119369226|sp|Q2GAU7.1|ENGB_NOVAD RecName: Full=Probable GTP-binding protein EngB
gi|87134284|gb|ABD25026.1| GTP-binding protein [Novosphingobium aromaticivorans DSM 12444]
Length = 217
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 121/190 (63%), Gaps = 2/190 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++EF +A P PD+PEIAFAGRSNVGKSS+LNALT + + RTS PG TQ +N
Sbjct: 22 GRVEFLKSAPALKFLPDPDVPEIAFAGRSNVGKSSLLNALTGRKSLARTSVTPGRTQELN 81
Query: 62 FFKLG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
+F++G T+L LVD+PGYGFA A +V + W LV++++ RV LKR LLID++ GVKP
Sbjct: 82 YFEVGEPTRLRLVDMPGYGFAKAPPKVVETWRRLVRDFLRGRVVLKRTLLLIDSRHGVKP 141
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
D +++ +++ + Y++VLTK D + ++ + + + + + +++ SS+
Sbjct: 142 VDDDMMQMLDEAGVGYRIVLTKADKIKASELEKVTAETIAAARKRTAAYPEIIVTSSEKK 201
Query: 180 AGIRSLRTVL 189
GI LR +
Sbjct: 202 MGIEELRAAV 211
>gi|347761815|ref|YP_004869376.1| GTPase [Gluconacetobacter xylinus NBRC 3288]
gi|347580785|dbj|BAK85006.1| GTPase [Gluconacetobacter xylinus NBRC 3288]
Length = 223
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 122/192 (63%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ F A+ P P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 28 GEFNFVFGAQKLGQLPDPILPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLN 87
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF++ +L LVD+PGYGFA A + VK+ W+ ++ Y+ R +L+RV LL+D++ VK D
Sbjct: 88 FFEMANRLTLVDMPGYGFAKAAKAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKASD 147
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ +++R+ +QVVLTK D P + + ++ + A+ + V+ SS++G G
Sbjct: 148 QEIMKMLDRAAVTFQVVLTKCDVPKPHALEAKLREVSAIVAAHAAAFPHVLATSSETGMG 207
Query: 182 IRSLRTVLSKIA 193
I LR L+++A
Sbjct: 208 IEDLRAELARLA 219
>gi|357030894|ref|ZP_09092838.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter
morbifer G707]
gi|356415588|gb|EHH69231.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter
morbifer G707]
Length = 226
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 123/193 (63%), Gaps = 5/193 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+FF ++ P PE+AFAGRSNVGKSS++NALT + + R S +PG T+ +NFF
Sbjct: 25 QFFFGSQTIDQLPPVGRPEVAFAGRSNVGKSSLINALTNRRALARASSEPGRTKQLNFFN 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L +L LVD+PGYGFA A + VK+ W+ ++ Y+ R +L RV LL+D + +K D E+
Sbjct: 85 LADRLTLVDMPGYGFAKASKSVKEDWQGMMFAYLRGRTTLSRVILLLDARIELKKSDREV 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGAGIR 183
+ L++R+ +Q+VLTK D V P + R ++ E+L ++ P ++ SS++G GI
Sbjct: 145 MELLDRAAVVFQIVLTKCDQVRPKALEARTAEV-EALALKHAAAYPRIVCTSSETGEGIE 203
Query: 184 SLRTVLSKIARFA 196
LR ++IARFA
Sbjct: 204 DLR---AEIARFA 213
>gi|58040259|ref|YP_192223.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter oxydans
621H]
gi|81556980|sp|Q5FPX9.1|ENGB_GLUOX RecName: Full=Probable GTP-binding protein EngB
gi|58002673|gb|AAW61567.1| Probable GTP-binding protein EngB [Gluconobacter oxydans 621H]
Length = 227
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 127/196 (64%), Gaps = 5/196 (2%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ EFF ++ P PE+AFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 23 GECEFFFGSQKIDQLPPVGRPEVAFAGRSNVGKSSIINALTGRRALARASSEPGRTKQLN 82
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF L +L LVD+PGYGFA A + VK+ W++++ Y+ R +L+RV LL+D + +K D
Sbjct: 83 FFNLADRLSLVDMPGYGFAKAAKSVKEDWQDMMFAYLRGRTTLERVILLLDARIELKASD 142
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGA 180
+++ L++R+ +Q+VLTK D V P +A + ++ E+L ++ P ++ SS++G
Sbjct: 143 KDVMELLDRAAVVFQIVLTKCDQVKPKALAAKIAEV-EALALKHAAAYPRIIATSSETGF 201
Query: 181 GIRSLRTVLSKIARFA 196
GI LR ++IARFA
Sbjct: 202 GIEDLR---AEIARFA 214
>gi|221640559|ref|YP_002526821.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides KD131]
gi|429207206|ref|ZP_19198465.1| GTP-binding protein EngB [Rhodobacter sp. AKP1]
gi|221161340|gb|ACM02320.1| GTP-binding protein engB [Rhodobacter sphaeroides KD131]
gi|428189581|gb|EKX58134.1| GTP-binding protein EngB [Rhodobacter sp. AKP1]
Length = 217
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 119/189 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F + P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG LVDLPGYG+A A + + + W+ L+K Y++ R +L+R +LIDT+ GVK D E+
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++L++RS +QVV+TK D V + Q+ +LK + + ++M SS+ G GI +
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSSEKGMGIET 208
Query: 185 LRTVLSKIA 193
LRT+++ +
Sbjct: 209 LRTIVATLG 217
>gi|146278899|ref|YP_001169058.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides ATCC 17025]
gi|145557140|gb|ABP71753.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17025]
Length = 217
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 119/188 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F + P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG LVDLPGYG+A A + + + W+ L+K Y++ R +L+R +LIDT+ G+K D E+
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGIKSVDEEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++L++RS +QVV+TK D V + Q+ +LK + + ++M SS+ G GI +
Sbjct: 149 LNLLDRSAVTFQVVMTKADKVSQAEREAVLGQVRGALKKHPAAYPELVMTSSEKGLGIET 208
Query: 185 LRTVLSKI 192
LRT+++ +
Sbjct: 209 LRTIIATL 216
>gi|56695444|ref|YP_165792.1| ribosome biogenesis GTP-binding protein YsxC [Ruegeria pomeroyi
DSS-3]
gi|81558731|sp|Q5LW13.1|ENGB_SILPO RecName: Full=Probable GTP-binding protein EngB
gi|56677181|gb|AAV93847.1| GTP-binding protein [Ruegeria pomeroyi DSS-3]
Length = 217
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 118/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ INFF
Sbjct: 29 EFVKGVVAMSGLPPADRVEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFT 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPGYG+A A +V + W++L+K+Y+S R +L+R +LID + GVK D E+
Sbjct: 89 QGPELYLVDLPGYGYANAPLKVVEKWQKLLKQYLSGRQTLRRAFVLIDARHGVKAVDDEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ S +Q VLTK D V + + Q+ +L + + +++ SS+ G GI +
Sbjct: 149 MKLLDTSAVTFQCVLTKADKVKAAERDKVLAQVRAALAKHPAAYPEIVLTSSEKGDGIAT 208
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 209 LRSIIAHL 216
>gi|126463487|ref|YP_001044601.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides ATCC 17029]
gi|332559540|ref|ZP_08413862.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N]
gi|126105151|gb|ABN77829.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17029]
gi|332277252|gb|EGJ22567.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N]
Length = 217
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 119/189 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F + P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYFA 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG LVDLPGYG+A A + + + W+ L+K Y++ R +L+R +LIDT+ GVK D E+
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++L++RS +QVV+TK D V + Q+ +LK + + ++M SS+ G GI +
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSSEKGMGIET 208
Query: 185 LRTVLSKIA 193
LRT+++ +
Sbjct: 209 LRTIVATLG 217
>gi|149913106|ref|ZP_01901640.1| GTP-binding protein [Roseobacter sp. AzwK-3b]
gi|149813512|gb|EDM73338.1| GTP-binding protein [Roseobacter sp. AzwK-3b]
Length = 216
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 115/189 (60%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F S P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ INFF
Sbjct: 27 VDFLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGRKAIARASNTPGRTQEINFF 86
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LG LVDLPGYG+A A + AW+ L+K+Y+S R SL+R +L+DT+ G+K D E
Sbjct: 87 ALGESHYLVDLPGYGYANAPLDKVAAWQALLKKYLSGRQSLRRAFVLVDTRHGIKSVDEE 146
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++SL++ S +Q VLTK D V D Q+ L + + ++M SS+ G GI
Sbjct: 147 IMSLLDSSAVTFQCVLTKADKVKDKDREAVLEQVRAKLAKHPAAYPEIIMTSSEKGDGIA 206
Query: 184 SLRTVLSKI 192
+LR V++ +
Sbjct: 207 TLRAVIATL 215
>gi|296115060|ref|ZP_06833702.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter
hansenii ATCC 23769]
gi|295978397|gb|EFG85133.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter
hansenii ATCC 23769]
Length = 235
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 127/193 (65%), Gaps = 2/193 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ +F A+ P P LPEIAFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 37 GECQFVFGAQKLGQLPDPLLPEIAFAGRSNVGKSSLVNALTGRRTLARASSEPGRTKQLN 96
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L +L LVD+PGYGFA A + VK+ W+ ++ ++ R +LKRV LL+D++ +K D
Sbjct: 97 FFELAGRLTLVDMPGYGFAKAAKAVKEDWQGMMFSFLRGRPTLKRVVLLLDSRVEIKESD 156
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV-SSKSGA 180
E++ L++R+ +Q+VLTK D P +A + + E + A+++ P+++V SS +G
Sbjct: 157 REIMKLLDRAAVTFQIVLTKCDIPKPPVLAAKLRETRE-IAASHAAAYPLVLVTSSANGE 215
Query: 181 GIRSLRTVLSKIA 193
GI LR L+++A
Sbjct: 216 GIVELRAELAQLA 228
>gi|254475298|ref|ZP_05088684.1| hypothetical protein RR11_1134 [Ruegeria sp. R11]
gi|214029541|gb|EEB70376.1| hypothetical protein RR11_1134 [Ruegeria sp. R11]
Length = 216
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 116/179 (64%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ IN+F G +L LVD
Sbjct: 37 SGLPDADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFTQGPELYLVD 96
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
LPGYG+A A V + W+ L+K+Y+S R +L+R +LID++ G+K D E++ L++ S
Sbjct: 97 LPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHGIKKVDAEIMKLLDSSAV 156
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
+QVV+TK D V D A Q+ E+L + + +++ SS+ G GI +LR +++ +
Sbjct: 157 TFQVVMTKADKVKEKDRAAVLSQVREALSKHPAAYPEIVLTSSEKGDGIPTLRAIIAGL 215
>gi|77464647|ref|YP_354151.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides 2.4.1]
gi|119369248|sp|Q3IYY4.1|ENGB_RHOS4 RecName: Full=Probable GTP-binding protein EngB
gi|77389065|gb|ABA80250.1| Probable GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 217
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 118/189 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F + P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG LVDLPGYG+A A + + W+ L+K Y++ R +L+R +LIDT+ GVK D E+
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVQRWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++L++RS +QVV+TK D V + Q+ +LK + + ++M SS+ G GI +
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSSEKGMGIET 208
Query: 185 LRTVLSKIA 193
LRT+++ +
Sbjct: 209 LRTIVATLG 217
>gi|384917732|ref|ZP_10017842.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. 357]
gi|384468373|gb|EIE52808.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. 357]
Length = 217
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 115/189 (60%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F P D PE+ FAGRSNVGKSS++NALT + + R S+ PG TQ IN+F
Sbjct: 28 VDFLKGVVAMEGLPPDDRPEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYF 87
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LG LVDLPGYGFA A V + W+ L+K Y+S R SL+R +LID + G+K D E
Sbjct: 88 LLGDSGYLVDLPGYGFANAPLPVVEKWQRLLKHYLSGRASLRRAFVLIDARHGIKAVDEE 147
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+++L++RS +Q VLTK D + + Q+ + L + + +++ SS+ G GI
Sbjct: 148 IMTLLDRSAVTFQAVLTKIDKIRDSERDTVLTQVRDRLSRHPAAYPEIVLTSSEKGEGIA 207
Query: 184 SLRTVLSKI 192
+LR +++ +
Sbjct: 208 TLRAIIAGL 216
>gi|365858836|ref|ZP_09398742.1| ribosome biogenesis GTP-binding protein YsxC [Acetobacteraceae
bacterium AT-5844]
gi|363713564|gb|EHL97167.1| ribosome biogenesis GTP-binding protein YsxC [Acetobacteraceae
bacterium AT-5844]
Length = 221
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 111/178 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EFF AA+ P P LPE+AF GRSNVGKSS+ NALT Q + R S PG T+ +NFF
Sbjct: 29 EFFYAAQSIDQLPPPGLPEVAFCGRSNVGKSSITNALTGQNSLARVSHTPGRTKQLNFFN 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG +L LVD+PGYG+A A + VK+ W+ L+ ++ R +L+RV LL+D++ K DH
Sbjct: 89 LGDRLVLVDMPGYGYAQAAKSVKEDWQGLMFNFLRGRPTLRRVVLLLDSRIETKASDHAA 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ L+ + +Q+VLTK D V P +A+R + +K + V+ SS++G GI
Sbjct: 149 MKLLTDAAVTFQIVLTKADDVKPGQLAKREAEAATLVKKYTAAHPVVITTSSETGLGI 206
>gi|312113265|ref|YP_004010861.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium
vannielii ATCC 17100]
gi|311218394|gb|ADP69762.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium
vannielii ATCC 17100]
Length = 214
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 118/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF ++ P + PE+AFAGRSNVGKSS+LNAL + + R S+ PG T+ +N+F
Sbjct: 26 EFVLGVTDVAALPEGNRPEVAFAGRSNVGKSSLLNALLSRRNLARVSNTPGRTREVNYFS 85
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+G L +VD+PGYG+A A + + W +L+ +Y+ R LKRV LLID++ G+KP D E+
Sbjct: 86 VGDALYVVDMPGYGYAKAPKALVKGWTQLIHDYLRGRPQLKRVMLLIDSRHGLKPSDKEI 145
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++L++++ YQ VLTK D D+ + + E ++ + + V+ SS GAGI
Sbjct: 146 MTLLDKAAVSYQGVLTKADKPKAGDLGQVVRETEAVMRTHPAAHPVVLTTSSVDGAGIEE 205
Query: 185 LRTVLSKI 192
LRT ++++
Sbjct: 206 LRTAIAEL 213
>gi|110678769|ref|YP_681776.1| ribosome biogenesis GTP-binding protein YsxC [Roseobacter
denitrificans OCh 114]
gi|119369250|sp|Q16AA3.1|ENGB_ROSDO RecName: Full=Probable GTP-binding protein EngB
gi|109454885|gb|ABG31090.1| GTP-binding protein [Roseobacter denitrificans OCh 114]
Length = 216
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 118/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P PD E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ INFF
Sbjct: 28 EFVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G LVDLPGYG+A A V + W+ L+K+Y+S R +L+R +LID + GVK D E+
Sbjct: 88 AGESHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+SL++ + +QVVLTK D V + + Q+ +L + + +++ SS+ G GI +
Sbjct: 148 LSLLDSAAVTFQVVLTKADKVKEKEREKVLDQVRTALSKHPAAFPELVITSSEKGWGIPT 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIITDL 215
>gi|407975992|ref|ZP_11156894.1| GTP-binding protein YsxC [Nitratireductor indicus C115]
gi|407428493|gb|EKF41175.1| GTP-binding protein YsxC [Nitratireductor indicus C115]
Length = 226
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 112/195 (57%), Gaps = 9/195 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A P PE+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +NFF
Sbjct: 26 FLRGAPSMKFLPPEGPPEVAFAGRSNVGKSSLINALLAQKGLARTSNTPGRTQELNFFVP 85
Query: 66 G---------TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
+ L+D+PGYGFA A + DAW ELV Y+ RV+LKRV LLID + G
Sbjct: 86 DGYSGAEGDMPPIALIDMPGYGFAKAPKAQVDAWTELVFSYLRGRVTLKRVFLLIDARHG 145
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+K D E++ L++++ YQVVLTK D + P VAR + LK + ++ SS
Sbjct: 146 IKKNDEEVMDLLDKAAVSYQVVLTKADKIKPPAVARLVEETHGRLKKRPAAFPELVATSS 205
Query: 177 KSGAGIRSLRTVLSK 191
+ G GI LR + +
Sbjct: 206 EKGLGIEDLRAAIHR 220
>gi|407800539|ref|ZP_11147399.1| GTP-binding protein [Oceaniovalibus guishaninsula JLT2003]
gi|407057458|gb|EKE43434.1| GTP-binding protein [Oceaniovalibus guishaninsula JLT2003]
Length = 214
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 120/192 (62%), Gaps = 3/192 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ EF S P D E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ +N
Sbjct: 24 GQTEFLKGVVAMSGLPPADRAEVCFAGRSNVGKSSLINALTGRRGLARASNTPGRTQEVN 83
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF G + LVDLPGYGFA A +V W+ L+K+Y+S R +L+R LLID + G K D
Sbjct: 84 FFTAG-DIYLVDLPGYGFANAPVKVVQTWQRLMKDYLSGRSTLRRAFLLIDARHGAKAVD 142
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGA 180
E+++L++RS +Q V+TK D D+ RRA+ + + A + P +++ SS++G
Sbjct: 143 EEIMALLDRSAVTFQAVMTKIDKPRGDDL-RRALDVTRAALARHPAAFPEIVLTSSETGQ 201
Query: 181 GIRSLRTVLSKI 192
GI +LR +++ +
Sbjct: 202 GIDTLRGLIATL 213
>gi|372278314|ref|ZP_09514350.1| GTP-binding protein YsxC [Oceanicola sp. S124]
Length = 217
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 116/189 (61%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F P D E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ INFF
Sbjct: 28 VDFLKGVVAMDGLPPADRIEVCFAGRSNVGKSSLINALTGRKGIARASNTPGRTQEINFF 87
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LG + LVDLPGYG+A A V + W+ L+K+Y+ R +L+R +LID + GVK D E
Sbjct: 88 TLGEERYLVDLPGYGYANAPLSVVEKWQRLLKQYLQGRQTLRRAFVLIDARHGVKAVDEE 147
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ L++ + +Q VLTK D V D R Q+ +L + + +++ SS+ G GI
Sbjct: 148 IMKLLDSAAVTFQCVLTKADKVKLADRERVLNQVRGALSKHPAAFPELVLTSSEKGDGIA 207
Query: 184 SLRTVLSKI 192
SLR++++ +
Sbjct: 208 SLRSIIASL 216
>gi|407776856|ref|ZP_11124128.1| GTP-binding protein YsxC [Nitratireductor pacificus pht-3B]
gi|407301552|gb|EKF20672.1| GTP-binding protein YsxC [Nitratireductor pacificus pht-3B]
Length = 227
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 116/194 (59%), Gaps = 9/194 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-- 63
F A P PE+AFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +NFF
Sbjct: 26 FIRGAPAMKFLPPEGPPEVAFAGRSNVGKSSLINALLSRRGLARTSNTPGRTQELNFFVP 85
Query: 64 --KLGTK-----LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
GT + L+D+PGYGFA A +E DAW +LV +Y+ RV+LKRV LLID + G
Sbjct: 86 EGYSGTDGDLPPMALIDMPGYGFAKAPKEQVDAWTKLVFDYLRGRVTLKRVFLLIDARHG 145
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+K D E++ L++++ YQVVLTK D + P V R + E LK + ++ SS
Sbjct: 146 IKKNDEEVMDLLDKAAVSYQVVLTKADKIKPPAVLRLLGETETRLKKRAAAYPQIVATSS 205
Query: 177 KSGAGIRSLRTVLS 190
+ G G+ LR ++
Sbjct: 206 EKGEGLDELRDAIA 219
>gi|381166573|ref|ZP_09875787.1| putative GTP-binding protein engB [Phaeospirillum molischianum DSM
120]
gi|380684146|emb|CCG40599.1| putative GTP-binding protein engB [Phaeospirillum molischianum DSM
120]
Length = 233
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 121/188 (64%), Gaps = 8/188 (4%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
+ P DLPE+AFAGRSNVGKSS+LNALT + + RTS+ PG TQ +NFF LG +L LVD+
Sbjct: 50 TLPPADLPELAFAGRSNVGKSSLLNALTGRNSLARTSNTPGRTQELNFFDLGGRLILVDM 109
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A + + W L++ ++ R L+RV +L+D++ G+K D ++ +++++
Sbjct: 110 PGYGFASAPKAQVERWTRLIEGFLRGRTVLRRVIVLVDSRHGLKDSDRTMMKMLDQAAVV 169
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKA---NNSLVQPVMM-VSSKSGAGIRSLRTVLS 190
YQVVLTK D + +A + E+++A + P ++ SS++G GI LR L+
Sbjct: 170 YQVVLTKADKISDAALA----AVTETVRAEIVTRTAAHPTLIATSSETGLGIAELRAELA 225
Query: 191 KIARFAKV 198
+AR K+
Sbjct: 226 TLARGVKI 233
>gi|359409462|ref|ZP_09201930.1| ribosome biogenesis GTP-binding protein YsxC/EngB [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356676215|gb|EHI48568.1| ribosome biogenesis GTP-binding protein YsxC/EngB [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 221
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 121/192 (63%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ +F AAA+ + P LPEIAFAGRSNVGKSS++NALT + + RTS PG T+ +
Sbjct: 22 GQCDFIAAAQNLPALPPISLPEIAFAGRSNVGKSSLVNALTGRTTLARTSQTPGRTRQLV 81
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF L +L LVDLPGYG+A A + AW +L ++++ R SL+R+ LLID++ G+ P D
Sbjct: 82 FFSLANRLQLVDLPGYGYAKAAKTDIKAWTKLTRKFLVGRQSLQRMLLLIDSRRGIGPAD 141
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ LM+ S + VVLTKTD + P + + ++ + + + V SS++GAG
Sbjct: 142 KEMMKLMDESAVSWAVVLTKTDKLKPTQAQQIYDKTQQEISRHVAAFPHVWTTSSQTGAG 201
Query: 182 IRSLRTVLSKIA 193
I LR L+ ++
Sbjct: 202 IAELRAHLASLS 213
>gi|339504813|ref|YP_004692233.1| GTP-binding protein EngB [Roseobacter litoralis Och 149]
gi|338758806|gb|AEI95270.1| putative GTP-binding protein EngB [Roseobacter litoralis Och 149]
Length = 216
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 117/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P PD E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ INFF
Sbjct: 28 EFVKGVVAMSGLPDPDRMEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G LVDLPGYG+A A V + W+ L+K+Y+S R +L+R +LID + G K D E+
Sbjct: 88 AGESHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGAKKVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+SL++ + +QVVLTK D V + + Q+ +L + + +++ SS+ G GI +
Sbjct: 148 LSLLDSAAVTFQVVLTKADKVKEKEREKVLDQVRNALSKHPAAFPELVVTSSEKGWGIPT 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIITDL 215
>gi|400755729|ref|YP_006564097.1| GTP binding protein EngB [Phaeobacter gallaeciensis 2.10]
gi|398654882|gb|AFO88852.1| putative GTP binding protein EngB [Phaeobacter gallaeciensis 2.10]
Length = 216
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 117/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ IN+F
Sbjct: 28 EFVKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPGYG+A A V + W+ L+K+Y+S R +L+R +LID++ G+K D E+
Sbjct: 88 QGPELYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHGIKKVDDEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ ++ S +Q V+TK D V D A Q+ +L + + ++M SS+ G GI +
Sbjct: 148 MTRLDSSAVTFQCVMTKADKVKDKDRAVVMEQVRSALSKHPAAYPEIVMTSSEKGDGIAT 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIIAGL 215
>gi|163745581|ref|ZP_02152941.1| GTPase EngB [Oceanibulbus indolifex HEL-45]
gi|161382399|gb|EDQ06808.1| GTPase EngB [Oceanibulbus indolifex HEL-45]
Length = 216
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 116/178 (65%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
P PD E+ FAGRSNVGKS+++NALT + R S+ PG TQ INFF G + LVDL
Sbjct: 38 GLPPPDRMEVCFAGRSNVGKSTLINALTGMKALARASNTPGRTQEINFFTAGEEHYLVDL 97
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A A V + W+ L+K+Y+S R +L+R +LID + GVK D+E++SL++ S
Sbjct: 98 PGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVDNEIMSLLDSSAVT 157
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
+QVVLTK D V + + Q++E+L + + +++ SS+ G GI +LR +++ +
Sbjct: 158 FQVVLTKGDKVKEAERTKILEQVKEALSKHPAAYPEIVVTSSEKGWGIPTLRAIIATL 215
>gi|427429275|ref|ZP_18919310.1| GTP-binding protein EngB [Caenispirillum salinarum AK4]
gi|425880468|gb|EKV29164.1| GTP-binding protein EngB [Caenispirillum salinarum AK4]
Length = 226
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A P LPE+ FAGRSNVGKSS++NALT + + RTSD PG TQ +NFF L
Sbjct: 36 FVLGAAALVQIPEEPLPEVCFAGRSNVGKSSLINALTNRNKLARTSDTPGRTQELNFFNL 95
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G +L + DLPGYGFA A +E W + Y+ R L+RV +L+D++ G+K DH+++
Sbjct: 96 GDRLMIADLPGYGFAKAPKEKVKQWTAVTMAYLQGRAQLRRVMVLVDSRHGLKDSDHDVM 155
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMM-VSSKSGAGIRS 184
+++++ YQVVLTK D + +R + +++L A + PV++ SS G GI
Sbjct: 156 KMLDQAAVNYQVVLTKIDKLKGNQAEKRVAETQDAL-AKHVAAHPVVIPTSSAKGDGIPE 214
Query: 185 LRTVLSKIA 193
LR + +A
Sbjct: 215 LRAEIGALA 223
>gi|340777549|ref|ZP_08697492.1| GTP-binding protein YsxC [Acetobacter aceti NBRC 14818]
Length = 223
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 3/193 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EFF A+ P P PE+AFAGRSNVGKSS++NALT + + R S +PG T+ +NFF
Sbjct: 30 EFFYGAQQIGQLPDPAAPEVAFAGRSNVGKSSLINALTGRKSLARASSEPGRTKQLNFFD 89
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L +L LVD+PGYGFA A + VK+ W+ ++ +Y+ R +L+RV LL+D + K D ++
Sbjct: 90 LDGQLVLVDMPGYGFAKAAKAVKEDWQGMMFDYLRGRPNLRRVILLLDARIETKASDRDV 149
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ + +++ +QVVLTK D V P R ++ E + + + V+ SS++G GI
Sbjct: 150 MDMFDKAAINFQVVLTKCDDVKPKAEEARYREVVEEVSRHPAAHPLVLRTSSQTGLGIPE 209
Query: 185 LRTVLSKIARFAK 197
LR ++IA FA+
Sbjct: 210 LR---AEIAAFAE 219
>gi|154244318|ref|YP_001415276.1| ribosome biogenesis GTP-binding protein YsxC [Xanthobacter
autotrophicus Py2]
gi|154158403|gb|ABS65619.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
Length = 217
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 117/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F AA P EIA AGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 25 QFVTAAPTVEVLPPMVGMEIALAGRSNVGKSSLVNALTGRKALARTSVTPGRTQELIFFR 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+G +L LVD+PGYGFA A +E +AW +K Y+ RV+L RV +LID++ G+KP D E+
Sbjct: 85 VGPELSLVDMPGYGFAKAPKEKVEAWTHTIKAYLRGRVNLARVFVLIDSRHGIKPVDEEI 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++++ Y ++LTK+D V P + ++E +K + V SS++GAG
Sbjct: 145 LDLLDKAAVSYAIILTKSDQVKPSALPHVIASVQEKIKRRPAAYPVVFPTSSQTGAGFPE 204
Query: 185 LRTVLSKI 192
LR ++++
Sbjct: 205 LRAAVARL 212
>gi|86135822|ref|ZP_01054401.1| GTP-binding protein [Roseobacter sp. MED193]
gi|85826696|gb|EAQ46892.1| GTP-binding protein [Roseobacter sp. MED193]
Length = 216
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 115/179 (64%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ IN+F G +L LVD
Sbjct: 37 SGLPDADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFTQGPELYLVD 96
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
LPGYG+A A V + W++L+K Y+S R +L+R +LID++ GVK D E++SL++ S
Sbjct: 97 LPGYGYANAPLAVVEKWQKLLKRYLSGRQTLRRAFVLIDSRHGVKDVDEEIMSLLDSSAV 156
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
+Q V+TK D V D R Q+ +L + + +++ SS+ G GI +LR+++ +
Sbjct: 157 TFQCVMTKADKVKIKDRDRVIEQVRTALARHPAAYPEIVLTSSEKGDGIATLRSIICGL 215
>gi|254461126|ref|ZP_05074542.1| GTP-binding protein [Rhodobacterales bacterium HTCC2083]
gi|206677715|gb|EDZ42202.1| GTP-binding protein [Rhodobacteraceae bacterium HTCC2083]
Length = 217
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 113/191 (59%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ EF S P D E+ FAGRSNVGKS+++NALT + R S+ PG TQ IN
Sbjct: 26 GQTEFVKGVVAMSGLPDADRMEVCFAGRSNVGKSTLINALTGHKALARASNTPGRTQEIN 85
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LVDLPGYG+A A V + W+ L+K+Y+S R +L+R +LID + GVK D
Sbjct: 86 FFTAAESHYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKAVD 145
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
HE++SL++ S +Q VLTK D V +D + Q+ L + + +++ SS+ G G
Sbjct: 146 HEIMSLLDSSAVTFQCVLTKADKVKLVDREKVLNQVRGELAKHPAAFPEMVLTSSEKGDG 205
Query: 182 IRSLRTVLSKI 192
I LR +++ +
Sbjct: 206 IEQLRAIIATL 216
>gi|414341261|ref|YP_006982782.1| protein EngB [Gluconobacter oxydans H24]
gi|411026596|gb|AFV99850.1| EngB [Gluconobacter oxydans H24]
gi|453330535|dbj|GAC87281.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter
thailandicus NBRC 3255]
Length = 222
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 124/196 (63%), Gaps = 5/196 (2%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ EFF ++ P PE+AFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 22 GECEFFFGSQKIEQLPPVGRPEVAFAGRSNVGKSSIINALTGRKALARASSEPGRTKQLN 81
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF L ++ LVD+PGYGFA A + VK+ W+ ++ Y+ R +L RV LL+D + +K D
Sbjct: 82 FFNLSDRISLVDMPGYGFAKAAKSVKEDWQNMMFAYLRGRTTLARVILLLDARIELKASD 141
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGA 180
+++ L++R+ +Q+VLTK D V P + + ++ E+L ++ P ++ SS++G
Sbjct: 142 KDVMELLDRAAVVFQIVLTKCDQVRPTALKAKIAEV-EALALKHAAAYPRIVCTSSQTGE 200
Query: 181 GIRSLRTVLSKIARFA 196
GI LR ++IARFA
Sbjct: 201 GIEDLR---AEIARFA 213
>gi|296535612|ref|ZP_06897792.1| ribosome biogenesis GTP-binding protein YsxC [Roseomonas cervicalis
ATCC 49957]
gi|296264067|gb|EFH10512.1| ribosome biogenesis GTP-binding protein YsxC [Roseomonas cervicalis
ATCC 49957]
Length = 221
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 116/189 (61%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F+ AA+ P LPE+AF GRSNVGKSS++NALT Q + R S PG T+ +NFF
Sbjct: 30 QFYFAAQRLDQLPEARLPEVAFCGRSNVGKSSLVNALTGQNSLARVSSTPGRTKQLNFFD 89
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG +L LVD+PGYG+A A + VK+ W+ L+ E++ R L+RV LL+D + K D
Sbjct: 90 LGGRLALVDMPGYGYAQASKSVKEDWQGLMFEFLRGRPVLRRVVLLLDARIETKASDRAA 149
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L+ + +Q+VLTK D+ P + +R + +K + + V+ SS++GAGI
Sbjct: 150 MELLNNAAVNFQIVLTKADSAKPYWLKQRQEEAAALVKQHTAAHPLVITTSSETGAGIPE 209
Query: 185 LRTVLSKIA 193
LR L+ +A
Sbjct: 210 LRAELTALA 218
>gi|148261133|ref|YP_001235260.1| ribosome biogenesis GTP-binding protein YsxC [Acidiphilium cryptum
JF-5]
gi|326404534|ref|YP_004284616.1| GTP-binding protein EngB [Acidiphilium multivorum AIU301]
gi|338986433|ref|ZP_08633477.1| EngB [Acidiphilium sp. PM]
gi|146402814|gb|ABQ31341.1| tRNA modification GTPase trmE [Acidiphilium cryptum JF-5]
gi|325051396|dbj|BAJ81734.1| GTP-binding protein EngB [Acidiphilium multivorum AIU301]
gi|338206643|gb|EGO94735.1| EngB [Acidiphilium sp. PM]
Length = 209
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 119/188 (63%), Gaps = 1/188 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
FF AA+ + P P+ EIA AGRSNVGKS+++NA+T Q + R + PG T+ +NFF++
Sbjct: 20 FFHAAQTAEGLPEPEGIEIALAGRSNVGKSTLINAITGQVALARVAQAPGRTRQLNFFRI 79
Query: 66 GTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G L +VD+PGYG+A A + VK W+ L+ Y+ R +L+RV LL+D + KP DH +
Sbjct: 80 GDGPLTIVDMPGYGYAAAPKAVKRDWQGLMFRYLRGRPNLRRVLLLMDARIEDKPADHAV 139
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++++ +QVVLTK D + P +A + I + + + + V++ S ++GAGI
Sbjct: 140 MELLDQAAVSFQVVLTKADKMKPEALASKLASIGAIARRHPAALNEVLVTSGETGAGIAE 199
Query: 185 LRTVLSKI 192
LR V+ +
Sbjct: 200 LRAVIHGL 207
>gi|399991429|ref|YP_006571669.1| GTP binding protein EngB [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398655984|gb|AFO89950.1| putative GTP binding protein EngB [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 216
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 117/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ IN+F
Sbjct: 28 EFVKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVDLPGYG+A A + + W+ L+K+Y+S R +L+R +LID++ G+K D E+
Sbjct: 88 QGPELYLVDLPGYGYANAPLPIVEKWQRLLKQYLSGRQTLRRSFVLIDSRHGIKKVDDEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ ++ S +Q V+TK D V D A Q+ +L + + ++M SS+ G GI +
Sbjct: 148 MTRLDSSAVTFQCVMTKADKVKDKDRAVVMEQVRSALSKHPAAYPEIVMTSSEKGDGIAT 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIIAGL 215
>gi|389878568|ref|YP_006372133.1| ribosome biogenesis GTP-binding protein YsxC [Tistrella mobilis
KA081020-065]
gi|388529352|gb|AFK54549.1| ribosome biogenesis GTP-binding protein YsxC [Tistrella mobilis
KA081020-065]
Length = 221
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 118/192 (61%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ + F A P +LPEIAFAGRSNVGKSS++NALT + + R S+ PG TQ +
Sbjct: 22 LGPVSFVMGAASLRDLPPDELPEIAFAGRSNVGKSSLINALTERGNLARVSNTPGRTQQL 81
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF+ ++ +VD+PGYG+A A + + AW+++V Y+ R +L RV +LID + GVK
Sbjct: 82 NFFRFADRMMMVDMPGYGYAEAPKAMVKAWQKMVFSYLRGRSNLARVYVLIDGRHGVKEN 141
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E+ L++ + YQVV+TK D +A+R IE L+ + + V++ SS+
Sbjct: 142 DREVFKLLDDAAVSYQVVVTKADKEKAPVLAKRLQAIETELRRHVAAYPEVIVTSSRKMR 201
Query: 181 GIRSLRTVLSKI 192
G+ +LR ++++
Sbjct: 202 GMETLRAAIARL 213
>gi|126737053|ref|ZP_01752788.1| GTP-binding protein [Roseobacter sp. SK209-2-6]
gi|126721638|gb|EBA18341.1| GTP-binding protein [Roseobacter sp. SK209-2-6]
Length = 216
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 116/188 (61%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF S P D E+ FAGRSNVGKSS++NALT G+ R S+ PG TQ IN+F
Sbjct: 28 EFVKGVVAMSGLPEADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G L LVDLPGYG+A A V + W++L+K Y+S R +L+R +LID++ GVK D E+
Sbjct: 88 QGPDLFLVDLPGYGYANAPLPVVEKWQKLLKRYLSGRQTLRRAFVLIDSRHGVKEVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ + +Q V+TK D V D + Q+ ++L + + +++ SS+ G GI +
Sbjct: 148 MKLLDSAAVTFQCVMTKADKVKVKDREKVLEQVRKALARHPAAYPEIVLTSSEKGDGIAT 207
Query: 185 LRTVLSKI 192
LR +++ I
Sbjct: 208 LRALIAGI 215
>gi|354594312|ref|ZP_09012351.1| putative GTP-binding protein EngB [Commensalibacter intestini A911]
gi|353671988|gb|EHD13688.1| putative GTP-binding protein EngB [Commensalibacter intestini A911]
Length = 220
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 121/187 (64%), Gaps = 1/187 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
FF A +++ PA LPE+AFAGRSNVGKSS++NA+T + + R S +PG T+ +NFF +
Sbjct: 32 FFGAQRLNQLEPAT-LPEVAFAGRSNVGKSSLINAITGRKMLARASSEPGRTKQLNFFNI 90
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G KL VD+PGYG+A A ++VK W++++ ++ R +L RV LL+D + +K DH ++
Sbjct: 91 GEKLVFVDMPGYGYAKASKDVKSDWQKMMFAFLRGRPTLLRVMLLLDARIELKQSDHNIM 150
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
L++R+ +Q+VLTK D + + ++ +I E +K++ + + + SS+ GI L
Sbjct: 151 DLLDRAAVTFQIVLTKADQLSAAKLEKKQQEILEVIKSHTAAYPHIRVTSSQKNIGIEDL 210
Query: 186 RTVLSKI 192
R L ++
Sbjct: 211 RADLVRL 217
>gi|402773365|ref|YP_006592902.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
SC2]
gi|401775385|emb|CCJ08251.1| Ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
SC2]
Length = 220
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 121/194 (62%), Gaps = 12/194 (6%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
FA+AK +S P PEIAFAGRSNVGKSS+LNALT++ + R S+ PG TQ +NFF LG
Sbjct: 25 FASAK-ASDLPVIGPPEIAFAGRSNVGKSSLLNALTKRKTLARVSNTPGRTQQLNFFALG 83
Query: 67 -----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+L LVD+PGYG+A +E W +L+++Y+ R SL RV +L+D + GVKP D
Sbjct: 84 GGPDAERLRLVDMPGYGYAAVGKEKVANWSQLMRDYLRGRASLARVFVLVDGRRGVKPLD 143
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA---NNSLVQPVMMVSSKS 178
E+ L+++S YQV+LTK D + +A RA I + KA + V+ S+ S
Sbjct: 144 EEMFDLLDQSAVSYQVILTKHDE---LKMAERADVIAATTKALEKRPAAFPEVIFTSAHS 200
Query: 179 GAGIRSLRTVLSKI 192
G GI LR ++++
Sbjct: 201 GEGIPELRGAVARL 214
>gi|159042882|ref|YP_001531676.1| ribosome biogenesis GTP-binding protein YsxC [Dinoroseobacter
shibae DFL 12]
gi|157910642|gb|ABV92075.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
Length = 217
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++ F S P D E+ FAGRSNVGKSS++NALT + + RTS+ PG TQ IN
Sbjct: 26 GEVTFLKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARTSNTPGRTQEIN 85
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+F LG LVD+PGYGFA A V W+ L+K Y++ R +L+R +LID + G+K D
Sbjct: 86 YFCLGEDRYLVDVPGYGFAEAPVAVVQKWQALLKAYLTGRPTLRRAFVLIDARHGIKAVD 145
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
HE++SL++ + +QVVLTK D + + + Q+ + L + + +++ SS G G
Sbjct: 146 HEIMSLLDTAAVTFQVVLTKADKIKTAEQDKTLAQVRKELARHPAAFPELLLTSSAKGDG 205
Query: 182 IRSLRTVLSKI 192
I +LR ++ +
Sbjct: 206 IETLRATVAGL 216
>gi|410943107|ref|ZP_11374848.1| GTP-binding protein YsxC [Gluconobacter frateurii NBRC 101659]
Length = 222
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ EFF ++ P PE+AFAGRSNVGKSS++NALT + + R S +PG T+ +N
Sbjct: 22 GECEFFFGSQKIEQLPPVGRPEVAFAGRSNVGKSSIINALTGRKALARASSEPGRTKQLN 81
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF L ++ LVD+PGYGFA A + VK+ W+ ++ Y+ R +L RV LL+D + +K D
Sbjct: 82 FFNLSDRISLVDMPGYGFAKAAKSVKEDWQNMMFAYLRGRTTLARVILLLDARIELKASD 141
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGA 180
+++ L++R+ +Q+VLTK D V P + + + E+L ++ P ++ SS++G
Sbjct: 142 KDVMELLDRAAVVFQIVLTKCDQVRPNALKAKIADV-EALALKHAAAYPRIVCTSSQTGE 200
Query: 181 GIRSLRTVLSKIARFA 196
GI LR ++IARFA
Sbjct: 201 GIEDLR---AEIARFA 213
>gi|254467073|ref|ZP_05080484.1| hypothetical protein RBY4I_3686 [Rhodobacterales bacterium Y4I]
gi|206687981|gb|EDZ48463.1| hypothetical protein RBY4I_3686 [Rhodobacterales bacterium Y4I]
Length = 215
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 118/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + P D E+ FAGRSNVGKSS++NA+T G+ R S+ PG TQ INFF
Sbjct: 28 EFDKGVVAMNGLPDADRVEVCFAGRSNVGKSSVINAVTGTKGIARASNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G L LVDLPGYG+A A V + W++L+K+Y+S R +L+R +LID++ GVK D ++
Sbjct: 88 QGPDLYLVDLPGYGYANAPLAVVEKWQKLLKQYLSGRQNLRRAFVLIDSRHGVKKVDEDI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ + +Q V+TK D V D A+ Q+ +L + + +++ SS+ G GI +
Sbjct: 148 MKLLDSAAVTFQCVMTKADKVKEKDRAKVLEQVRGALARHPAAYPEIVLTSSEKGDGIPT 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIIAGL 215
>gi|162147918|ref|YP_001602379.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542535|ref|YP_002274764.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786495|emb|CAP56077.1| GTP-binding protein engB [Gluconacetobacter diazotrophicus PAl 5]
gi|209530212|gb|ACI50149.1| GTP-binding protein HSR1-related [Gluconacetobacter diazotrophicus
PAl 5]
Length = 223
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+FF A+ P P PEIAFAGRSNVGKSS++NALT + + R S +PG T+ +NFF
Sbjct: 30 DFFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNFFD 89
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG +L LVD+PGYG+A A ++VK+ W+ ++ Y+ R +L+RV LL+D++ +K D E+
Sbjct: 90 LGGRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIELKASDREI 149
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++L++R+ +Q+VLTK D P + + Q + + + + SS +G GI
Sbjct: 150 MTLLDRAAVTFQIVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSSDTGLGI 207
>gi|218530581|ref|YP_002421397.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium
extorquens CM4]
gi|240138938|ref|YP_002963413.1| GTP-binding protein engB [Methylobacterium extorquens AM1]
gi|254561546|ref|YP_003068641.1| GTP-binding protein engB [Methylobacterium extorquens DM4]
gi|418063499|ref|ZP_12701168.1| GTP-binding protein engB [Methylobacterium extorquens DSM 13060]
gi|218522884|gb|ACK83469.1| GTP-binding protein HSR1-related [Methylobacterium extorquens CM4]
gi|240008910|gb|ACS40136.1| putative GTP-binding protein engB [Methylobacterium extorquens AM1]
gi|254268824|emb|CAX24785.1| putative GTP-binding protein engB [Methylobacterium extorquens DM4]
gi|373558298|gb|EHP84648.1| GTP-binding protein engB [Methylobacterium extorquens DSM 13060]
Length = 219
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 118/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F AA + P + EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF+
Sbjct: 26 DFATAAPALGALPPMEGVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRTQQLNFFR 85
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+G +L LVD+PGYG+A ++ +AW +L+ Y+ R +L RV LLID++ G+K D +L
Sbjct: 86 IGERLTLVDMPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVYLLIDSRHGLKEIDTDL 145
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ ++++ YQ+VLTK D + ++ +R I +L + V++ SS+ G+
Sbjct: 146 LDGLDKAAVSYQIVLTKGDALKKAEIEKRIAGIHAALAKRPAAYPEVLLTSSRDDRGVAE 205
Query: 185 LRTVLSKI 192
LR ++++
Sbjct: 206 LRASIARL 213
>gi|149186359|ref|ZP_01864672.1| GTP-binding protein [Erythrobacter sp. SD-21]
gi|148829948|gb|EDL48386.1| GTP-binding protein [Erythrobacter sp. SD-21]
Length = 217
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 119/194 (61%), Gaps = 2/194 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++EF +A P P +PEIAFAGRSNVGKSS+LNALT + + R S PG TQ +N
Sbjct: 22 GRVEFLLSAPQLKFLPEPTVPEIAFAGRSNVGKSSLLNALTGRRKIARASVTPGRTQELN 81
Query: 62 FFKLG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
FF++G T+ LVD+PGYGFA A +V + W+ LVK Y+ R L R +L+D++ G+K
Sbjct: 82 FFEVGEPTQFRLVDMPGYGFAKAPVKVVEKWKNLVKTYLRGRQVLVRNLVLVDSRHGLKD 141
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
D E++ +++ + Y+VVLTK D + ++A+ +E K + + + + SS+ G
Sbjct: 142 VDREMMKMLDEAAVGYRVVLTKADKIKASELAKTVAAVEAEAKKHVAAYPQIHVTSSEKG 201
Query: 180 AGIRSLRTVLSKIA 193
GI LR L + A
Sbjct: 202 MGIGELRAALLRDA 215
>gi|167644607|ref|YP_001682270.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter sp. K31]
gi|167347037|gb|ABZ69772.1| GTP-binding protein HSR1-related [Caulobacter sp. K31]
Length = 214
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 111/187 (59%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A P D PE+AFAGRSNVGKSS++N L Q + R S+ PG T+ +NFF L
Sbjct: 25 FMMGAVKMDGMPTADFPEVAFAGRSNVGKSSLINGLVGQNHLARASNSPGRTREVNFFVL 84
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
KL LVDLPGYGFA + V D +++L + Y+ RV+LKRV LLID + G+K D E +
Sbjct: 85 AEKLRLVDLPGYGFARVSKTVADKFQDLGRAYLRGRVNLKRVYLLIDARHGLKSVDTEAL 144
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
++ + YQ+VLTK D + P +V ++++ + V+ SS+ G G+ L
Sbjct: 145 DALDVAAVSYQIVLTKADKIKPAEVEAVVAATQKAIAKRPAAFPKVLATSSEKGDGLPEL 204
Query: 186 RTVLSKI 192
R ++++
Sbjct: 205 RAEIARV 211
>gi|334142728|ref|YP_004535936.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium sp.
PP1Y]
gi|359398646|ref|ZP_09191662.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium
pentaromativorans US6-1]
gi|333940760|emb|CCA94118.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium sp.
PP1Y]
gi|357599884|gb|EHJ61587.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium
pentaromativorans US6-1]
Length = 213
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P PD+PEIAF GRSNVGKSS+LNALT + + RTS PG TQ +NFF++
Sbjct: 22 FLKSAPALKFLPDPDVPEIAFCGRSNVGKSSLLNALTGRKAIARTSVTPGRTQELNFFEV 81
Query: 66 GTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
G L LVD+PGYGFA A V + W LV++++ RV LKR LL+D + GVK D E
Sbjct: 82 GEPLLFRLVDMPGYGFAKAPPAVVEKWRRLVRDFLRGRVVLKRTLLLVDARHGVKAVDAE 141
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ +++ + Y++VLTK D + ++ + + + + + V + SS+ G GI
Sbjct: 142 MMKMLDEAAVGYRIVLTKADKIKATELEKVHAETVAEARKHPAAFPEVHITSSEKGMGIA 201
Query: 184 SLRTVL 189
LR +
Sbjct: 202 ELRAAV 207
>gi|295690948|ref|YP_003594641.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter segnis
ATCC 21756]
gi|295432851|gb|ADG12023.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter segnis
ATCC 21756]
Length = 220
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 115/189 (60%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F A + PAPDLPE+AFAGRSNVGKSS++N L Q + R S++PG T+ INFF
Sbjct: 28 VSFIMGAVRMDAMPAPDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRTREINFF 87
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L ++ LVDLPGYGFA + D +++L + Y+ R +LKRV +LID + G+K D E
Sbjct: 88 LLAEQVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVYVLIDARHGLKKVDLE 147
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+ ++ + YQ+VLTK+D + P +V + +++ + V+ SS+ G G+
Sbjct: 148 ALDALDVAAVSYQIVLTKSDKIKPAEVDKVVADTLKAIAKRPAAFPRVLATSSEKGLGLP 207
Query: 184 SLRTVLSKI 192
LR + ++
Sbjct: 208 ELRAEIVRV 216
>gi|163851773|ref|YP_001639816.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium
extorquens PA1]
gi|163663378|gb|ABY30745.1| GTP-binding protein HSR1-related [Methylobacterium extorquens PA1]
Length = 256
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 118/188 (62%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F AA + P + EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF+
Sbjct: 63 DFATAAPALGALPPMEGVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRTQQLNFFR 122
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+G +L LVD+PGYG+A ++ +AW +L+ Y+ R +L RV LLID++ G+K D +L
Sbjct: 123 IGERLTLVDMPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVYLLIDSRHGLKEIDTDL 182
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ ++++ YQ+VLTK D + ++ +R I +L + V++ SS+ G+
Sbjct: 183 LDGLDKAAVSYQIVLTKGDALKKAEIEKRIAGIHAALAKRPAAYPEVLLTSSRDDRGVAE 242
Query: 185 LRTVLSKI 192
LR ++++
Sbjct: 243 LRASIARL 250
>gi|84499799|ref|ZP_00998087.1| GTP-binding protein [Oceanicola batsensis HTCC2597]
gi|84392943|gb|EAQ05154.1| GTP-binding protein [Oceanicola batsensis HTCC2597]
Length = 216
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 118/189 (62%), Gaps = 2/189 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF P D E+ FAGRSNVGKSS++NALT + R S+ PG TQ IN+F
Sbjct: 28 EFVKGVVAMDGLPPADRMEVCFAGRSNVGKSSLINALTGTRNLARASNTPGRTQEINYFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG + LVDLPGYG+A A V + W+ L+++Y+S R +L+R +LID + GVK D E+
Sbjct: 88 LGDRGYLVDLPGYGYANAPLPVVEKWQRLLRQYLSGRQTLRRAFVLIDARHGVKKVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGAGIR 183
+SL++ + ++VVLTK D V D+ RA+ + S + + P +++ SS+ G GI
Sbjct: 148 MSLLDSAAVTFEVVLTKIDKVRRSDL-DRALDVTRSALSKHPAAYPELVLTSSEKGDGIA 206
Query: 184 SLRTVLSKI 192
+LR++++ I
Sbjct: 207 TLRSIIAGI 215
>gi|56552523|ref|YP_163362.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260753816|ref|YP_003226709.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|13124231|sp|Q9RNL6.1|ENGB_ZYMMO RecName: Full=GTP-binding protein EngB; AltName: Full=GTP-binding
protein CgpA
gi|5932358|gb|AAD56911.1|AF180145_3 GTP-binding protein CgpA [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544097|gb|AAV90251.1| GTP-binding protein HSR1-related protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258553179|gb|ACV76125.1| GTP-binding protein HSR1-related [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 212
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 116/188 (61%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A PAP PE+AFAGRSNVGKSS++NALT + + R S PG TQ +NFF
Sbjct: 20 VNFLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFF 79
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYGFA A ++V W+ L+ +Y+ R L+R +LID++ G+K D
Sbjct: 80 DVGEPLQMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILIDSRHGIKDVD 139
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+L+ +++ + Y+VVLTK+D + +++ + I E ++ + + ++ SS+ G G
Sbjct: 140 RDLMKMLDDAAISYRVVLTKSDKIKAVELEKTVKAITEEMRKHPAAFPEIIATSSEKGTG 199
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 200 IAELRAAV 207
>gi|408379919|ref|ZP_11177510.1| GTP-binding protein YsxC [Agrobacterium albertimagni AOL15]
gi|407746296|gb|EKF57821.1| GTP-binding protein YsxC [Agrobacterium albertimagni AOL15]
Length = 219
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 120/189 (63%), Gaps = 10/189 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F +
Sbjct: 25 SMEFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGQ 84
Query: 65 LG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G + LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 85 AGDLPPMALVDMPGYGYAQAPKEHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++SL++++ YQ+VLTKTD + V + + +E +K + V+ SS+ G G+
Sbjct: 145 EVLSLLDKAAVSYQIVLTKTDKIKAPGVVKLIAETQEKIKKRPAAFPVVLSTSSEKGDGL 204
Query: 183 RSLRTVLSK 191
LR +S+
Sbjct: 205 DQLRGAISE 213
>gi|260577137|ref|ZP_05845114.1| GTP-binding protein HSR1-related protein [Rhodobacter sp. SW2]
gi|259020611|gb|EEW23930.1| GTP-binding protein HSR1-related protein [Rhodobacter sp. SW2]
Length = 216
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 116/189 (61%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ IN+F
Sbjct: 27 VDFVKGVVAMPGLPPADRLEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYF 86
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LGT+ LVDLPGYG+A A V + W+ L+K Y+ R +L+R +LIDT+ GVK D E
Sbjct: 87 ALGTERYLVDLPGYGYAEAPVAVVEKWQRLLKNYLQGRQTLRRAFVLIDTRHGVKAVDEE 146
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+++L++RS +Q VLTK D V + Q+ +L + + +++ S++ G GI
Sbjct: 147 ILTLLDRSAVTFQAVLTKADKVSKAERDAIIDQVRGALAKHPAAYPELVVTSAEKGDGIE 206
Query: 184 SLRTVLSKI 192
+LR +++ +
Sbjct: 207 TLRAIIATL 215
>gi|114706825|ref|ZP_01439725.1| GTP-binding protein [Fulvimarina pelagi HTCC2506]
gi|114537773|gb|EAU40897.1| GTP-binding protein [Fulvimarina pelagi HTCC2506]
Length = 217
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 115/187 (61%), Gaps = 9/187 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF---KLGTK---- 68
P PE+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +NFF G +
Sbjct: 30 LPPEGPPEVAFAGRSNVGKSSLINALLGQKGLARTSNTPGRTQELNFFVPDGFGGETTEL 89
Query: 69 --LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ +VD+PGYG+A A +E DAW ELV +Y+ R +LKRV +LID + G+K D E++
Sbjct: 90 PPIAIVDMPGYGYAQAPKEKVDAWTELVFDYLRGRPTLKRVFVLIDARHGIKANDEEVLK 149
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK D + P V + EE+++ + ++ SS+ +G+ L+
Sbjct: 150 LLDKAAMSYQIVLTKIDKIKPTGVPKLIAATEEAIRKRPAAYPGILATSSEKRSGLDELQ 209
Query: 187 TVLSKIA 193
L +A
Sbjct: 210 AALGMLA 216
>gi|294675900|ref|YP_003576515.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003]
gi|294474720|gb|ADE84108.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003]
Length = 216
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F + P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ INFF
Sbjct: 29 FLKGVVAMAGLPPADRIEVCFAGRSNVGKSSLINALTGRKNLARASNTPGRTQEINFFTT 88
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
LVDLPGYGFA A + W+ L+K Y+S R +L+R +LID + GVK D E++
Sbjct: 89 EGGPYLVDLPGYGFAEAPVAIVKKWQALLKSYLSGRATLRRAFVLIDARHGVKAVDEEIL 148
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
L++RS +Q VLTK D + ++ R Q++ +L + + +++ SS+ G GI +L
Sbjct: 149 QLLDRSAVTFQAVLTKADKISKAELERVIEQVKGALAKHPAAYPEIVVTSSEKGEGIETL 208
Query: 186 RTVLSKI 192
R +++ +
Sbjct: 209 RAIIATL 215
>gi|149203000|ref|ZP_01879971.1| GTP-binding protein [Roseovarius sp. TM1035]
gi|149143546|gb|EDM31582.1| GTP-binding protein [Roseovarius sp. TM1035]
Length = 216
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 113/189 (59%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F S P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ INFF
Sbjct: 27 VDFVKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFF 86
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LG LVDLPGYG+A A V W+ L+K+Y+S R +L+R +L+D + G+K D E
Sbjct: 87 ALGESHYLVDLPGYGYANAPLAVVQKWQALLKQYLSGRQTLRRAFVLVDARHGIKTVDEE 146
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++SL++ S +Q VLTKTD + D R Q+ L + + +++ SS+ G+
Sbjct: 147 IMSLLDASAVTFQCVLTKTDKINAADRDRVLDQVRAKLAPHPAAYPELILTSSEKSEGLA 206
Query: 184 SLRTVLSKI 192
+LR ++ +
Sbjct: 207 TLRATIATL 215
>gi|46201109|ref|ZP_00055731.2| COG0218: Predicted GTPase [Magnetospirillum magnetotacticum MS-1]
Length = 228
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A PA L E+AFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF L
Sbjct: 41 FMQGASGLDHLPAATLTEVAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFFNL 100
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G +L LVD+PGYGFA A + + + W LV ++ R L+R +L+D++ G+K D +++
Sbjct: 101 GGRLVLVDMPGYGFAQAPKGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHGLKDSDRDMM 160
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDV----ARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++++ YQVVLTK D + ++ AR +I+ + A+ SL+ + SS+ G G
Sbjct: 161 KMLDKAAVVYQVVLTKADKLKASELDAVQARTLEEIKSRVAAHPSLI----VTSSEKGTG 216
Query: 182 IRSLRTVLSKIA 193
I LR L+ +A
Sbjct: 217 IPELRAELASLA 228
>gi|433771837|ref|YP_007302304.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Mesorhizobium
australicum WSM2073]
gi|433663852|gb|AGB42928.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Mesorhizobium
australicum WSM2073]
Length = 219
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 113/183 (61%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGTKL 69
P PEIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F GT L
Sbjct: 30 LPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGTDL 89
Query: 70 ---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVD+PGYG+A A +E D W +LV +Y+ RV+LKRV +LID + G+K +D E++S
Sbjct: 90 PPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLS 149
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + V R + +K + V+ SS+ G G+ L+
Sbjct: 150 LLDKAAVSYQIVLTKTDKIKAAGVPRLIEETLAKIKKRPAAFPFVLATSSEKGEGLEELQ 209
Query: 187 TVL 189
+
Sbjct: 210 AAI 212
>gi|227820667|ref|YP_002824637.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium fredii
NGR234]
gi|254783206|sp|C3MF47.1|ENGB_RHISN RecName: Full=Probable GTP-binding protein EngB
gi|227339666|gb|ACP23884.1| predicted GTP-binding protein EngB-related [Sinorhizobium fredii
NGR234]
Length = 217
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 118/193 (61%), Gaps = 11/193 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F
Sbjct: 25 SMKFLPPEGPAEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGE 84
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID + G+K D
Sbjct: 85 ADDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDARHGIKKNDE 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E+++L++++ YQ+VLTKTD + V R + + +K + V+ SS+ GAGI
Sbjct: 145 EVLALLDKAAVSYQIVLTKTDKIKAAGVPRLIAETLDKIKKRPAAYPEVLSTSSEKGAGI 204
Query: 183 RSLR-TVLSKIAR 194
LR T+ +AR
Sbjct: 205 EDLRITIEQAVAR 217
>gi|344924339|ref|ZP_08777800.1| GTP-binding protein YsxC [Candidatus Odyssella thessalonicensis
L13]
Length = 220
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%)
Query: 20 DLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
++PEIAFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF LG +L LVD+PGYG+
Sbjct: 46 EVPEIAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTQQLNFFDLGGRLYLVDMPGYGY 105
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVL 139
A + V W +L+ Y+ R +L+RV +L+D + +K D E++ ++++ YQVVL
Sbjct: 106 AEVPKSVVAEWRKLIDFYLRGRPTLQRVYVLLDARVEIKKHDLEIMEQLDKAAVSYQVVL 165
Query: 140 TKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
TK D V P+ + + ++E+ L+ + + VM SS G+GI LR +++
Sbjct: 166 TKCDKVGPLQLKKIISKLEDLLQNHPAAHPTVMPTSSAKGSGIEELRAEMAQFG 219
>gi|332186237|ref|ZP_08387982.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas sp. S17]
gi|332013605|gb|EGI55665.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas sp. S17]
Length = 224
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P P +PEIA AGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF +
Sbjct: 34 FLKSAPALKFLPDPIVPEIAVAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDV 93
Query: 66 GTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
G L LVD+PGYGFA A +++ W LV +++ R +LKR +LID++ G+K D E
Sbjct: 94 GNPPTLRLVDMPGYGFAKAPKDMVKQWRFLVNDFLRGRQALKRALVLIDSRHGIKEVDRE 153
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ +++R+ Y++VLTK D V ++A + E + + ++ SS+ G GI
Sbjct: 154 ILEMLDRAAVSYRIVLTKADKVKATELADVVARTEVEARKRPAAHPDILATSSEGGMGIA 213
Query: 184 SLRTVL 189
LR +
Sbjct: 214 ELRAAV 219
>gi|83859292|ref|ZP_00952813.1| GTP-binding protein [Oceanicaulis sp. HTCC2633]
gi|83852739|gb|EAP90592.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633]
Length = 192
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 112/179 (62%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
+ P +PE+AFAGRSNVGKSS++NALT + + R S +PG T+ +NFF + +L +VDL
Sbjct: 9 TLPDTHVPEVAFAGRSNVGKSSLINALTGRKQLARASTEPGRTRELNFFDMHGRLRIVDL 68
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A +EV W L + Y+ RV+LKRV LLID++ G+KP D ++ +++ +
Sbjct: 69 PGYGFAKAPKEVAARWTRLTQNYLRGRVNLKRVFLLIDSRHGIKPSDEAIMKVLDSAAVV 128
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
YQ+VLTKTD + P + +R + + + + + SS G+ LR +S +A
Sbjct: 129 YQIVLTKTDKLKPSEAQKRLEETQAKVARRPAAFPVISATSSAKRDGLDELRGEISTLA 187
>gi|170749902|ref|YP_001756162.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium
radiotolerans JCM 2831]
gi|170656424|gb|ACB25479.1| GTP-binding protein HSR1-related [Methylobacterium radiotolerans
JCM 2831]
Length = 217
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 110/170 (64%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYA 82
EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF++G +L LVD+PGYG+A
Sbjct: 42 EIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFFRIGERLSLVDMPGYGYAAV 101
Query: 83 KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKT 142
++ +AW L+ Y+ R +L RV +LID + G K D +++ ++++ YQVVLTK
Sbjct: 102 EKAKVEAWTRLIHSYLKGRTNLARVFMLIDARHGFKSIDTDVLDGLDKAAVSYQVVLTKG 161
Query: 143 DTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
D++ +VA R IE L + V++ SS+ +G+ LR ++K+
Sbjct: 162 DSLKKGEVASRIAGIEAGLAKRPAAYPQVILTSSRDDSGVPDLRAAIAKL 211
>gi|357024242|ref|ZP_09086403.1| GTP-binding protein YsxC [Mesorhizobium amorphae CCNWGS0123]
gi|355543928|gb|EHH13043.1| GTP-binding protein YsxC [Mesorhizobium amorphae CCNWGS0123]
Length = 219
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--------- 66
P PEIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F G
Sbjct: 30 LPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPGGFSGEGTDL 89
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A +E D W +LV +Y+ RV+LKRV +LID + G+K +D E++S
Sbjct: 90 PPMALVDMPGYGYASAPKEKVDDWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLS 149
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + V R + +K + V+ SS+ G+ LR
Sbjct: 150 LLDKAAVSYQIVLTKTDKIKAAGVPRLIEETLAKIKKRPAAFPFVLATSSEKSEGLEELR 209
Query: 187 TVL 189
+
Sbjct: 210 AAI 212
>gi|170743187|ref|YP_001771842.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium sp.
4-46]
gi|168197461|gb|ACA19408.1| GTP-binding protein HSR1-related [Methylobacterium sp. 4-46]
Length = 216
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 115/188 (61%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF
Sbjct: 24 DFATASDTLAGLPPMRGLEIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFFD 83
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG KL LVD+PGYG+A + +W EL+ Y+ R +L RV +LID + G+KP D E+
Sbjct: 84 LGGKLTLVDMPGYGYAAVSKAKVASWTELIHAYLQGRANLARVYVLIDARHGIKPNDGEV 143
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ ++ + YQVVLTK D + +VA R +L + +++ SS++G GI +
Sbjct: 144 LDELDAAAVSYQVVLTKGDDLKKGEVASRLDATAAALARRPAAYPEIILTSSRTGEGIPA 203
Query: 185 LRTVLSKI 192
LR ++++
Sbjct: 204 LRASVARL 211
>gi|338741687|ref|YP_004678649.1| GTP-binding protein [Hyphomicrobium sp. MC1]
gi|337762250|emb|CCB68085.1| GTP-binding protein, putative EngB [Hyphomicrobium sp. MC1]
Length = 218
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-KLGTKLCLVDL 74
P D PEIAFAGRSNVGKSS++NAL Q + R S+ PG TQ +NFF + +L LVD+
Sbjct: 35 LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQDLNFFTEPNDELYLVDM 94
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A ++ AW ++++ Y++ R +L RV LL+D + G+KP D E+++L++ +
Sbjct: 95 PGYGFAEAPKDKVAAWNKVLRAYLAGRRTLLRVFLLVDARHGLKPVDDEIMALLDGAAVS 154
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
YQVVLTK D + D+ + A + +E+L + + +++ SS+ G LR ++++
Sbjct: 155 YQVVLTKVDKISKTDLEKVAERTQEALAKHPAAFPQLILTSSEKALGFEELRGTIAQL 212
>gi|85705861|ref|ZP_01036957.1| GTP-binding protein [Roseovarius sp. 217]
gi|85669449|gb|EAQ24314.1| GTP-binding protein [Roseovarius sp. 217]
Length = 216
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 113/189 (59%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF S P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ INFF
Sbjct: 27 VEFVKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFF 86
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LG LVDLPGYG+A A V W+ L+K+Y+S R +L+R +L+D + G+K D E
Sbjct: 87 ALGESHYLVDLPGYGYANAPLAVVQKWQALLKQYLSGRQTLRRAFVLVDARHGIKTVDEE 146
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+++L++ + +Q VLTKTD + D R Q+ L + + +++ SS+ G+
Sbjct: 147 IMTLLDGAAVTFQCVLTKTDKINAADRDRVLDQVRSKLAPHPAAFPELILTSSEKSEGLA 206
Query: 184 SLRTVLSKI 192
+LR ++ +
Sbjct: 207 TLRATIATL 215
>gi|89068161|ref|ZP_01155578.1| GTP-binding protein [Oceanicola granulosus HTCC2516]
gi|89046400|gb|EAR52457.1| GTP-binding protein [Oceanicola granulosus HTCC2516]
Length = 218
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 110/179 (61%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S P D PE+ FAGRSNVGKS+++NALT + + R S+ PG TQ IN+F L LVD
Sbjct: 39 SGLPGADRPEVCFAGRSNVGKSTLINALTGRKALARASNTPGRTQEINYFALADSHYLVD 98
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
LPGYGFA A V W+ L+K+Y+ R +L+R +LID + G K D E+++L++ +
Sbjct: 99 LPGYGFANAPVAVVAKWQALLKQYLQGRQTLRRAFVLIDARHGAKAVDEEIMALLDSAAV 158
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
+Q VLTK D + + R Q+ +L + + +++ SS+ G GI +LR +++ I
Sbjct: 159 TFQCVLTKADKIKASERDRVLDQVRATLARHPAAYPEIVLTSSEKGDGIETLRAIVAGI 217
>gi|384412414|ref|YP_005621779.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|335932788|gb|AEH63328.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 212
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A PAP PE+AFAGRSNVGKSS++NALT + + R S PG TQ +NFF
Sbjct: 20 VNFLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFF 79
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYGFA A ++V W+ L+ +Y+ R L+R +LID++ G+K D
Sbjct: 80 DVGEPLQMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILIDSRHGIKDVD 139
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+L+ +++ + Y+VVLTK+D + ++ + I E ++ + + ++ SS+ G G
Sbjct: 140 RDLMKMLDDAAISYRVVLTKSDKIKAAELEKTVKAITEEMRKHPAAFPEIIATSSEKGTG 199
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 200 IAELRAAV 207
>gi|3820578|gb|AAC69623.1| GTP-binding protein [Caulobacter vibrioides]
Length = 199
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F A + P DLPE+AFAGRSNVGKSS++N L Q + R S++PG T+ INFF
Sbjct: 7 VSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRTRQINFF 66
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L K+ LVDLPGYGFA + D +++L + Y+ R +LKRV +LID + G+K D E
Sbjct: 67 LLAEKVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVYVLIDARHGLKKVDLE 126
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+ ++ + YQ+VLTK D + P +V + + ++++ + V+ SS+ G G+
Sbjct: 127 ALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAFPRVLATSSEKGLGMP 186
Query: 184 SLRTVLSKI 192
LR + ++
Sbjct: 187 ELRAEIVRL 195
>gi|16125019|ref|NP_419583.1| GTPase EngB [Caulobacter crescentus CB15]
gi|367465544|ref|YP_002516178.3| ribosome biogenesis GTP-binding protein YsxC [Caulobacter
crescentus NA1000]
gi|13638031|sp|Q9ZG89.2|ENGB_CAUCR RecName: Full=GTP-binding protein EngB; AltName: Full=GTP-binding
protein CgpA
gi|254783191|sp|B8H1E7.1|ENGB_CAUCN RecName: Full=Probable GTP-binding protein EngB
gi|13422003|gb|AAK22751.1| GTP-binding protein CgpA [Caulobacter crescentus CB15]
gi|220962914|gb|ACL94270.1| GTP-binding protein YihA [Caulobacter crescentus NA1000]
Length = 199
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F A + P DLPE+AFAGRSNVGKSS++N L Q + R S++PG T+ INFF
Sbjct: 7 VSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRTREINFF 66
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L K+ LVDLPGYGFA + D +++L + Y+ R +LKRV +LID + G+K D E
Sbjct: 67 LLAEKVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVYVLIDARHGLKKVDLE 126
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+ ++ + YQ+VLTK D + P +V + + ++++ + V+ SS+ G G+
Sbjct: 127 ALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAFPRVLATSSEKGLGMP 186
Query: 184 SLRTVLSKI 192
LR + ++
Sbjct: 187 ELRAEIVRL 195
>gi|397677336|ref|YP_006518874.1| GTP-binding protein engB [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395398025|gb|AFN57352.1| GTP-binding protein engB [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 212
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P P PE+AFAGRSNVGKSS++NALT + + R S PG TQ +NFF
Sbjct: 20 VNFLKSAPALEFLPVPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFF 79
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYGFA A ++V W+ L+ +Y+ R L+R +LID++ G+K D
Sbjct: 80 DVGEPLQMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILIDSRHGIKEVD 139
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+L+ +++ + Y+VVLTK+D + +++ + I E ++ + + ++ SS+ G G
Sbjct: 140 RDLMKMLDDAAISYRVVLTKSDKIKAVELEKTVKAITEEMRKHPAAFPEIIATSSEKGTG 199
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 200 IAELRAAV 207
>gi|393770889|ref|ZP_10359365.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium sp.
Rr 2-17]
gi|392723545|gb|EIZ80934.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium sp.
Rr 2-17]
Length = 214
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 115/187 (61%), Gaps = 4/187 (2%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P PD+PEIA +GRSNVGKSS+LNA+ + + RTS PG TQ +NFF +
Sbjct: 23 FLKSAPELKFLPNPDVPEIALSGRSNVGKSSLLNAIVGRKAIARTSVTPGRTQELNFFDV 82
Query: 66 GT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
G K LVD+PGYGFA A +V + W LV++Y+ RV LKR +L+D + GVKP D E
Sbjct: 83 GEPLKFRLVDMPGYGFAKAPPKVVEQWRRLVRDYLRGRVELKRTLVLVDARHGVKPVDVE 142
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDV-ARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++ +++ + Y+VVLTK D + ++ A A + E+ K + + V + SS+ G GI
Sbjct: 143 MMKMLDEAAVGYRVVLTKADKIKASELEAVHAATLVEARKHSAAFPH-VHITSSEKGLGI 201
Query: 183 RSLRTVL 189
LR +
Sbjct: 202 EELRAAV 208
>gi|27383210|ref|NP_774739.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium
japonicum USDA 110]
gi|81734112|sp|Q89BP9.1|ENGB_BRAJA RecName: Full=Probable GTP-binding protein EngB
gi|27356384|dbj|BAC53364.1| GTP-binding protein [Bradyrhizobium japonicum USDA 110]
Length = 217
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P D EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 QFIWASPSIQTLPPMDGVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ K L LVD+PGYG+A A + +W EL+ +++ R SL RV +LID + G+K D
Sbjct: 82 VPGKKDLRLVDMPGYGYAKAPKSQVASWTELIHKFLLGRASLARVYVLIDARHGLKDVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQ+VLTK D V P ++A R + E +L + + V+ SS+S G+
Sbjct: 142 EILGTLDRSAVSYQIVLTKADQVKPSELASRIAETEAALAKHPAAFPNVLATSSRSATGM 201
Query: 183 RSLRTVLSKI 192
LR ++K+
Sbjct: 202 AELRAAMAKL 211
>gi|85374953|ref|YP_459015.1| ribosome biogenesis GTP-binding protein YsxC [Erythrobacter
litoralis HTCC2594]
gi|84788036|gb|ABC64218.1| probable GTPase [Erythrobacter litoralis HTCC2594]
Length = 213
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+++F +A P P +PEIAF GRSNVGKSS+LNALT + + RTS PG TQ +N
Sbjct: 19 GRVDFLLSAPQLKFLPEPTVPEIAFCGRSNVGKSSLLNALTGRRSIARTSVTPGRTQELN 78
Query: 62 FFKLG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
FF++G T+ LVD+PGYGFA A +V + W+ LV+ Y+ R L R +L+D + G+K
Sbjct: 79 FFEVGEPTQFRLVDMPGYGFAKAPVKVVERWKNLVRTYLKGRQVLARTLVLVDARHGLKD 138
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
D E++++++ + Y+VVLTK D + ++ A ++ E + + + + + SS+ G
Sbjct: 139 VDREMMTMLDETAVSYRVVLTKADKIKASELEATAAKVAEEARKHPAAFPELHITSSEKG 198
Query: 180 AGIRSLRTVL 189
GI +LR +
Sbjct: 199 LGIAALRAAV 208
>gi|220925224|ref|YP_002500526.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium
nodulans ORS 2060]
gi|219949831|gb|ACL60223.1| GTP-binding protein HSR1-related [Methylobacterium nodulans ORS
2060]
Length = 216
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 109/178 (61%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
S P EIAFAGRSNVGKSS++N+LT + + RTS PG TQ +NFF LG KL LVD+
Sbjct: 34 SLPPMQGHEIAFAGRSNVGKSSLINSLTGRTTLARTSHTPGRTQQLNFFDLGGKLTLVDM 93
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A + AW EL+ Y+ R +L RV +LID + G+KP D E++ ++ +
Sbjct: 94 PGYGYAAVSKAKVAAWTELIHAYLQGRANLARVYVLIDARHGIKPNDGEVLDELDAAAVS 153
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
YQ+VLTK D + ++ R +L + +++ SS++G GI LR ++++
Sbjct: 154 YQIVLTKGDALKKSEIQARLDATSAALARRPAAYPEIILTSSRTGEGIAELRASVARL 211
>gi|326435855|gb|EGD81425.1| hypothetical protein PTSG_02146 [Salpingoeca sp. ATCC 50818]
Length = 528
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 126/188 (67%), Gaps = 5/188 (2%)
Query: 3 KLEFFAAAKVSSSF-PAPD-LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
KL F AAK+ SF PA D + E+ F GRSNVGKSS++NAL R RT DKPG+T+T+
Sbjct: 225 KLAFLGAAKLPQSFIPAHDGVKEVCFIGRSNVGKSSVINALGRS-NPARTEDKPGVTKTV 283
Query: 61 NFFKL-GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
NF+ L + + +VDLPGYGFA+AK + ++ W++ V++Y+S R +L+R+ +L+D + G+K
Sbjct: 284 NFYALEKSSVNVVDLPGYGFAFAKTDNQNEWQQTVEDYLSQRANLRRIFVLLDARHGLKR 343
Query: 120 RDHELIS-LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKS 178
D + + L + +Q+VLTK D V D+ RR + ++++L ++ V+ VS+ S
Sbjct: 344 IDIDFLHRLQATTAVPFQLVLTKCDLVPMDDIGRRLILLQQTLVELPGAIKDVITVSATS 403
Query: 179 GAGIRSLR 186
GAG+R LR
Sbjct: 404 GAGMRVLR 411
>gi|144899246|emb|CAM76110.1| GTP-binding protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 193
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 117/183 (63%), Gaps = 8/183 (4%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
+ P LPE+AFAGRSNVGKSS++NAL + V RTS+ PG TQ +NFF + +L LVD+
Sbjct: 9 TLPPFGLPELAFAGRSNVGKSSLINALCGRSTVARTSNTPGRTQELNFFDVNGRLILVDM 68
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A ++ DAW L+K ++ R +L+R LL+D++ G+K D E++ +++++
Sbjct: 69 PGYGFASAPKDKVDAWTRLIKGFLRGRPTLRRCILLVDSRHGLKDNDREMMDMLDKAAVV 128
Query: 135 YQVVLTKTDTVFPIDV----ARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLS 190
YQVVLTK D + +V R +I + + A +L+ + SS+ G GI LR +
Sbjct: 129 YQVVLTKIDKLNAAEVKAVQERTQAEISKRVAAYPTLI----LTSSEKGIGIPELRAEIL 184
Query: 191 KIA 193
++A
Sbjct: 185 QLA 187
>gi|13474032|ref|NP_105600.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium loti
MAFF303099]
gi|24418390|sp|Q98D85.1|ENGB_RHILO RecName: Full=Probable GTP-binding protein EngB
gi|14024784|dbj|BAB51386.1| GTP-binding protein [Mesorhizobium loti MAFF303099]
Length = 212
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 113/183 (61%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGTKL 69
P PEIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F G L
Sbjct: 23 LPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGADL 82
Query: 70 ---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVD+PGYG+A A +E D W +LV +Y+ RV+LKRV +LID + G+K +D E++S
Sbjct: 83 PPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLS 142
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + V R + + +K + V+ SS+ G G+ L+
Sbjct: 143 LLDKAAVSYQIVLTKTDKIKVAGVPRLIEETLQKIKKRPAAFPFVLATSSEKGEGLEELQ 202
Query: 187 TVL 189
+
Sbjct: 203 AAI 205
>gi|399058337|ref|ZP_10744513.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Novosphingobium
sp. AP12]
gi|398040995|gb|EJL34080.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Novosphingobium
sp. AP12]
Length = 215
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P PD+PE+AFAGRSNVGKSS+LNAL + + RTS PG TQ +NFF +
Sbjct: 24 FLKSAPALKFLPDPDVPEVAFAGRSNVGKSSLLNALVGRKAIARTSVTPGRTQELNFFDV 83
Query: 66 GT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
G K LVD+PGYGFA A +V + W LV++Y+ RV LKR +L+D++ GVK D +
Sbjct: 84 GEPLKFRLVDMPGYGFAKAPPKVTEEWRRLVRDYLRGRVELKRTLVLVDSRHGVKQVDLD 143
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDV-ARRAMQIEESLKANNSLVQPVMMV-SSKSGAG 181
+ +++ + Y++VLTK D + ++ A A + E+ K + PV+ V SS+ G G
Sbjct: 144 MFKMLDEAAVGYRIVLTKADKIKATELEAVHAATLVEARKHPAAF--PVVHVTSSEKGMG 201
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 202 IEELRAAV 209
>gi|146337895|ref|YP_001202943.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium sp.
ORS 278]
gi|146190701|emb|CAL74705.1| putative GTP-binding protein engB [Bradyrhizobium sp. ORS 278]
Length = 219
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 2/189 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A+ +S P EIAFAGRSNVGKSS++NALT Q + RTS PG TQ + FF+
Sbjct: 25 FTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELIFFQG 84
Query: 66 --GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L LVD+PGYG+A A + +W EL+ +++ R SL RV +LID + G+K D E
Sbjct: 85 PDSAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLLGRASLARVYVLIDARHGLKEVDQE 144
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ ++RS YQ+VLTK D + P ++A R + E +L + + V+ SS+SG G+
Sbjct: 145 ILKTLDRSAVSYQLVLTKADQIKPAELASRIAETETALAKHPAAFPQVLATSSRSGTGMP 204
Query: 184 SLRTVLSKI 192
LR + ++
Sbjct: 205 ELRAAMVRL 213
>gi|407770845|ref|ZP_11118211.1| GTP-binding protein YsxC [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407286228|gb|EKF11718.1| GTP-binding protein YsxC [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 220
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 114/177 (64%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
P D EI AGRSNVGKSS+ NA+T + + RTS+ PG TQ +N+F L L +VDLP
Sbjct: 43 LPPEDKIEICLAGRSNVGKSSLFNAITGRKDMARTSNTPGRTQQLNYFDLDGALNIVDLP 102
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYGFA A +++ D W+ ++K+Y+ RV+L+RV +LID++ G D E++ +++ + Y
Sbjct: 103 GYGFAKAPKDIVDTWQNVIKQYLRGRVTLRRVFVLIDSRHGFMKADLEMMKMLDEAAVSY 162
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
Q+VLTK D + + +R ++ E++K + + + + SS+ G G+ +LR ++ +
Sbjct: 163 QIVLTKADKLKKGQMEKRIREVVEAVKKHPAALSQLFATSSEKGTGLEALRAEIATL 219
>gi|162319777|ref|YP_423720.2| ribosome biogenesis GTP-binding protein YsxC [Magnetospirillum
magneticum AMB-1]
Length = 187
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
PA L E+AFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF LG +L LVD+P
Sbjct: 10 LPAATLTEVAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFFNLGGRLILVDMP 69
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYGFA A + + + W LV ++ R L+R +L+D++ G+K D +++ +++++ Y
Sbjct: 70 GYGFAQAPKGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHGLKDSDRDMMKMLDKAAVVY 129
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
QVVLTK D + ++ + E +K + +++ SS+ G GI LR L+ +A
Sbjct: 130 QVVLTKADKLKAAELDAVQARTLEEIKGRVAAHPHLIVTSSEKGTGIPELRAELASLA 187
>gi|15964196|ref|NP_384549.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium
meliloti 1021]
gi|334314844|ref|YP_004547463.1| GTP-binding protein engB [Sinorhizobium meliloti AK83]
gi|384528181|ref|YP_005712269.1| GTP-binding protein engB [Sinorhizobium meliloti BL225C]
gi|384534540|ref|YP_005718625.1| GTPase EngB [Sinorhizobium meliloti SM11]
gi|407719283|ref|YP_006838945.1| GTP-binding protein EngB [Sinorhizobium meliloti Rm41]
gi|418402530|ref|ZP_12976041.1| GTP-binding protein YsxC [Sinorhizobium meliloti CCNWSX0020]
gi|433612228|ref|YP_007189026.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Sinorhizobium
meliloti GR4]
gi|24418387|sp|Q92SF6.1|ENGB_RHIME RecName: Full=Probable GTP-binding protein EngB
gi|15073372|emb|CAC41880.1| Hypothetical GTP-binding protein [Sinorhizobium meliloti 1021]
gi|333810357|gb|AEG03026.1| GTP-binding protein engB [Sinorhizobium meliloti BL225C]
gi|334093838|gb|AEG51849.1| GTP-binding protein engB [Sinorhizobium meliloti AK83]
gi|336031432|gb|AEH77364.1| GTPase EngB [Sinorhizobium meliloti SM11]
gi|359503555|gb|EHK76106.1| GTP-binding protein YsxC [Sinorhizobium meliloti CCNWSX0020]
gi|407317515|emb|CCM66119.1| putative GTP-binding protein EngB [Sinorhizobium meliloti Rm41]
gi|429550418|gb|AGA05427.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Sinorhizobium
meliloti GR4]
Length = 217
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 115/187 (61%), Gaps = 10/187 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P EIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F +
Sbjct: 25 SMKFLPPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGE 84
Query: 65 LGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G + LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID + G+K D
Sbjct: 85 AGDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDARHGIKKNDE 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQ+VLTKTD + V R + E +K + V+ SS+ G GI
Sbjct: 145 DVLALLDKAAVSYQIVLTKTDKIKAAGVPRLVAETLEKIKKRPAAFPEVLSTSSEKGEGI 204
Query: 183 RSLRTVL 189
LR +
Sbjct: 205 EDLRAAI 211
>gi|300024924|ref|YP_003757535.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526745|gb|ADJ25214.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomicrobium
denitrificans ATCC 51888]
Length = 221
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-KLGTKLCLVDL 74
P D PEIAFAGRSNVGKSS++NAL Q + R S+ PG TQ +NFF L LVD+
Sbjct: 38 LPPDDRPEIAFAGRSNVGKSSLINALVGQRTLARASNTPGRTQELNFFTDPNADLYLVDM 97
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A ++ AW + ++ +++ R +L RV +L+D + G+KP D E+++L++ +
Sbjct: 98 PGYGFAEAPKDKVAAWNKTLRSFLAGRRTLLRVFVLVDARHGLKPVDDEIMALLDGAAVS 157
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
YQV+LTK D + D+ R +SL + + V+ SS++G G LR V++K+
Sbjct: 158 YQVLLTKADKISRTDLERVTANTTKSLAKHPAAYPRVLATSSETGMGFEDLRAVVAKL 215
>gi|417858765|ref|ZP_12503822.1| GTPase EngB [Agrobacterium tumefaciens F2]
gi|338824769|gb|EGP58736.1| GTPase EngB [Agrobacterium tumefaciens F2]
Length = 217
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 113/180 (62%), Gaps = 9/180 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F + G
Sbjct: 29 LPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEAGDL 88
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ G+K D E++S
Sbjct: 89 PPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLS 148
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQVVLTKTD + + V R + E ++ + V+ SS+ G+ SLR
Sbjct: 149 LLDKAAVSYQVVLTKTDKIKDVGVPRLINETLEKIRKRPAAYPEVLATSSEKSFGLDSLR 208
>gi|323137576|ref|ZP_08072653.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
ATCC 49242]
gi|322397202|gb|EFX99726.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
ATCC 49242]
Length = 217
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 117/194 (60%), Gaps = 12/194 (6%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
FA+AK + P PEIAFAGRSNVGKSS+LNALT + + R S PG TQ +NFF LG
Sbjct: 22 FASAK-PNDLPPLGPPEIAFAGRSNVGKSSLLNALTNRKTLARVSHTPGRTQQLNFFALG 80
Query: 67 -----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+L LVD+PGYG+A +E +W L+++Y+ R SL RV +L+D + GVKP D
Sbjct: 81 GAPGAERLRLVDMPGYGYAAVGKEKVASWSVLMRDYLRGRASLARVFVLVDGRRGVKPVD 140
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRA---MQIEESLKANNSLVQPVMMVSSKS 178
E+ L+++S YQV+LTK D + VA RA E+L + ++ SS +
Sbjct: 141 AEMFDLLDQSAVSYQVILTKHDE---LKVAERAEVLAATAEALSRRPAAYPEIIFTSSHT 197
Query: 179 GAGIRSLRTVLSKI 192
G GI LR ++++
Sbjct: 198 GEGIAELRGAVARL 211
>gi|418940405|ref|ZP_13493770.1| GTP-binding protein engB [Rhizobium sp. PDO1-076]
gi|375052819|gb|EHS49221.1| GTP-binding protein engB [Rhizobium sp. PDO1-076]
Length = 219
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 116/186 (62%), Gaps = 10/186 (5%)
Query: 16 FPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG-------- 66
F P+ P E+AFAGRSNVGKSS++NAL Q + RTS+ PG TQ +N+F
Sbjct: 28 FLPPEGPLEVAFAGRSNVGKSSLINALVGQKALARTSNTPGRTQELNYFVPDGYSGAADD 87
Query: 67 -TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID++ G+K D E++
Sbjct: 88 MPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDDEVL 147
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
SL++++ YQ+VLTKTD + V R + E +K + + V+ SS+ G G+ L
Sbjct: 148 SLLDKAAISYQIVLTKTDKIKEAGVPRLIAETLEKIKKHPAAFPEVLSTSSEKGNGLDEL 207
Query: 186 RTVLSK 191
R +++
Sbjct: 208 RAAIAE 213
>gi|188581559|ref|YP_001925004.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium
populi BJ001]
gi|179345057|gb|ACB80469.1| GTP-binding protein HSR1-related protein [Methylobacterium populi
BJ001]
Length = 218
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 112/170 (65%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYA 82
EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF++G +L LVD+PGYG+A
Sbjct: 43 EIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFFRIGGRLMLVDMPGYGYAAV 102
Query: 83 KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKT 142
++ +AW +L+ Y+ R +L RV LLID++ G+K D +L+ ++++ YQVVLTK
Sbjct: 103 EKAKVEAWTKLIHAYLKGRSNLARVYLLIDSRHGLKEIDTDLLDGLDKAAVSYQVVLTKG 162
Query: 143 DTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
D + ++ +R I+ +L + V++ SS+ G+ LR ++++
Sbjct: 163 DALKKSEIEKRIAGIQAALAKRPAAYPEVLLTSSRDDRGVAELRASIARL 212
>gi|398827986|ref|ZP_10586188.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Phyllobacterium
sp. YR531]
gi|398218704|gb|EJN05206.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Phyllobacterium
sp. YR531]
Length = 227
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 116/187 (62%), Gaps = 10/187 (5%)
Query: 16 FPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLGT 67
F P+ P EIAFAGRSNVGKSS++NA+ Q G+ RTS+ PG TQ +N+F + G
Sbjct: 34 FLPPEGPLEIAFAGRSNVGKSSLINAIIGQKGLARTSNTPGRTQELNYFVPEGYSGEAGD 93
Query: 68 --KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
L +VD+PGYGFA A +E DAW LV +Y+ R +L+RV LLID + G+K D E++
Sbjct: 94 LPPLAVVDMPGYGFAEAPKEQVDAWTRLVFDYLRGRTTLRRVYLLIDARHGIKKNDAEVL 153
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
L++R+ YQ+VLTK D + P V R + ++K + ++ SS+ +G+ L
Sbjct: 154 DLLDRAAVSYQIVLTKIDKIKPAGVPRLMEETALAIKKRAAAYPHILATSSEKSSGLDEL 213
Query: 186 RTVLSKI 192
R ++++
Sbjct: 214 RAAIAQL 220
>gi|347759151|ref|YP_004866713.1| hypothetical protein MICA_2409 [Micavibrio aeruginosavorus ARL-13]
gi|347591669|gb|AEP10711.1| conserved hypothetical protein [Micavibrio aeruginosavorus ARL-13]
Length = 213
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 114/185 (61%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EFFA + P PEIAFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF
Sbjct: 23 EFFAGVMDLNGLPPEGAPEIAFAGRSNVGKSSLINALTARKTLARTSNTPGRTQQLNFFD 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LG LVD+PGYG+A +++++ W+ L+ Y+ R SL+ V +LID++ G+K D +L
Sbjct: 83 LGGVFWLVDMPGYGYAKVSKKMREEWDNLIFSYLRGRPSLRSVFVLIDSRHGLKDVDLDL 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I +++ + ++VLTK D ++ + Q+E +LK + S V+ SS G GI
Sbjct: 143 IKMLDAAGVSARIVLTKVDKAGFQELKKTTEQVEAALKKHPSAFPFVLPTSSDKGTGIPD 202
Query: 185 LRTVL 189
L+ +
Sbjct: 203 LQVAI 207
>gi|337265175|ref|YP_004609230.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium
opportunistum WSM2075]
gi|336025485|gb|AEH85136.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium
opportunistum WSM2075]
Length = 219
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 115/186 (61%), Gaps = 15/186 (8%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGTKL 69
P PEIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F G L
Sbjct: 30 LPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGADL 89
Query: 70 ---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVD+PGYG+A A +E D W +LV +Y+ RV+LKRV +LID + G+K +D E++S
Sbjct: 90 PPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLS 149
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL---KANNSLVQPVMMVSSKSGAGIR 183
L++++ YQ+VLTKTD I VA IEE+L K + V+ SS+ G G+
Sbjct: 150 LLDKAAVSYQIVLTKTDK---IKVAGVPRLIEETLAKIKKRPAAFPFVLATSSEKGEGLE 206
Query: 184 SLRTVL 189
L+ +
Sbjct: 207 ELQAAI 212
>gi|398349974|ref|YP_006395438.1| GTP-binding protein EngB [Sinorhizobium fredii USDA 257]
gi|390125300|gb|AFL48681.1| putative GTP-binding protein EngB [Sinorhizobium fredii USDA 257]
Length = 217
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 112/184 (60%), Gaps = 10/184 (5%)
Query: 16 FPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG-------- 66
F P+ P EIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F
Sbjct: 28 FLPPEGPTEIAFAGRSNVGKSSLINALVGHRGLARTSNTPGRTQELNYFVPDGYSGEADD 87
Query: 67 -TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID + G+K D E++
Sbjct: 88 LPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDARHGIKKNDEEVL 147
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
SL++++ YQ+VLTKTD + V R + + +K + V+ SS+ G GI L
Sbjct: 148 SLLDKAAVSYQIVLTKTDKIKAAGVPRLIAETLDKIKKRPAAYPEVLSTSSEKGDGIEEL 207
Query: 186 RTVL 189
R +
Sbjct: 208 RAAI 211
>gi|407775416|ref|ZP_11122710.1| GTP-binding protein YsxC [Thalassospira profundimaris WP0211]
gi|407281423|gb|EKF06985.1| GTP-binding protein YsxC [Thalassospira profundimaris WP0211]
Length = 220
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 111/177 (62%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
P D EI FAGRSNVGKSS++NA+T + + RTS+ PG TQ +N+F L +VDLP
Sbjct: 43 LPPEDKTEICFAGRSNVGKSSLINAITGRKDIARTSNTPGRTQQLNYFDLDGACYIVDLP 102
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYGFA A +++ D W L+K+Y+ RV+L+RV +LID++ G K D +++ L++ + Y
Sbjct: 103 GYGFAQAPKDIVDTWHALIKQYLRGRVTLRRVFVLIDSRHGFKKADLDMMKLLDEAAVPY 162
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
QVVLTK D + + +R ++ + L + + + + SS+ G+ LR +S +
Sbjct: 163 QVVLTKADKLKKGQLEKRIKEVVDGLIKHPAALPQIFATSSEKNTGLAELRAEISTL 219
>gi|254487465|ref|ZP_05100670.1| GTP-binding protein [Roseobacter sp. GAI101]
gi|214044334|gb|EEB84972.1| GTP-binding protein [Roseobacter sp. GAI101]
Length = 216
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 114/188 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F P D E+ FAGRSNVGKS+++NALT + R S+ PG TQ IN+F
Sbjct: 28 QFVKGVVAMDGLPPADRMEVCFAGRSNVGKSTLINALTGMKALARASNTPGRTQEINYFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G LVDLPGYG+A A + + W+ L+K+Y+S R +L+R +LID + GVK D E+
Sbjct: 88 AGEDHYLVDLPGYGYANAPLPIVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+SL++ S +Q VLTK D V ++ A+ Q+ +L + + +++ SS+ G GI +
Sbjct: 148 MSLLDSSAVTFQCVLTKADKVKEVERAKILDQVRGALAKHPAAYPEIVVTSSEKGWGIPT 207
Query: 185 LRTVLSKI 192
LR +++ +
Sbjct: 208 LRAIIATL 215
>gi|150395306|ref|YP_001325773.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium medicae
WSM419]
gi|166225985|sp|A6U5K8.1|ENGB_SINMW RecName: Full=Probable GTP-binding protein EngB
gi|150026821|gb|ABR58938.1| GTP-binding protein HSR1-related [Sinorhizobium medicae WSM419]
Length = 217
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F
Sbjct: 25 SMKFLPPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGE 84
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID + G+K D
Sbjct: 85 ADDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDARHGIKKNDE 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E+++L++++ YQ+VLTKTD + V R + E ++ + V+ SS+ G GI
Sbjct: 145 EVLALLDKAAVSYQIVLTKTDKIKAAGVPRLLAETLEKIRKRPAAFPEVLSTSSEKGEGI 204
Query: 183 RSLRTVL 189
LR +
Sbjct: 205 EELRAAI 211
>gi|406990624|gb|EKE10262.1| ribosome biogenesis GTP-binding protein YsxC [uncultured bacterium]
Length = 214
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 111/179 (62%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S P P L EIAFAG SNVGKSS++NAL + + R S PG TQ +NFF+LG +VD
Sbjct: 30 SDLPEPALSEIAFAGHSNVGKSSLINALFGRKSLARVSHTPGRTQCLNFFRLGKYFYIVD 89
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A + W +L+ +Y+ RVSLKRV LLID++ G+K D ++ ++++
Sbjct: 90 MPGYGYAAVSKSKIKVWTQLIHDYLKGRVSLKRVFLLIDSRHGLKTSDLAVMKALDKAAV 149
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
YQ+VLTK D + + ++E+LK + + +++ S++ G G+ LR ++++
Sbjct: 150 SYQIVLTKADKSTQEHLKKLTQNLKEALKKHPAAFPELLLTSAQKGQGLDELRETIAEL 208
>gi|452963740|gb|EME68799.1| GTP-binding protein YsxC [Magnetospirillum sp. SO-1]
Length = 196
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 117/192 (60%), Gaps = 8/192 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A P L E+AFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF L
Sbjct: 9 FMQGASGLDHLPEASLTEVAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFFNL 68
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G +L LVD+PGYGFA A + + + W LV ++ R L+R +L+D++ G+K D +++
Sbjct: 69 GGRLVLVDMPGYGFAQAPKGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHGLKDSDRDMM 128
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDV----ARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++++ YQVVLTK D + ++ AR +I + A+ +L+ + SS+ G G
Sbjct: 129 KMLDKAAVVYQVVLTKADKLKAAELDAVHARTLEEIRSRVAAHPTLI----VTSSEKGTG 184
Query: 182 IRSLRTVLSKIA 193
I LR L+ +A
Sbjct: 185 IPELRAELASLA 196
>gi|163795446|ref|ZP_02189413.1| acetylglutamate kinase [alpha proteobacterium BAL199]
gi|159179432|gb|EDP63963.1| acetylglutamate kinase [alpha proteobacterium BAL199]
Length = 214
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
AA + P LPE+AFAGRSNVGKSS++NALT + + RTS+ PG TQ + FF LG++
Sbjct: 29 AAATTQQLPPLGLPEVAFAGRSNVGKSSLVNALTGRKSLARTSNTPGRTQELIFFDLGSR 88
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVDLPGYG+A + W + + Y+ R SL RV LLID++ G K D+E + L
Sbjct: 89 LQLVDLPGYGYAKVSKTKVQLWTDTLFAYLRGRTSLHRVNLLIDSRHGPKDIDNEAMDLF 148
Query: 129 ERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTV 188
+R+ YQ++LTK D P ++A + +L + + SS SG GI LR
Sbjct: 149 DRAALSYQIILTKADKPKPSELAELIESLGAALAKRPAAHPQIRATSSFSGDGIAELR-- 206
Query: 189 LSKIARFA 196
+++ARFA
Sbjct: 207 -AELARFA 213
>gi|359787963|ref|ZP_09290947.1| GTP-binding protein YsxC [Mesorhizobium alhagi CCNWXJ12-2]
gi|359256168|gb|EHK59040.1| GTP-binding protein YsxC [Mesorhizobium alhagi CCNWXJ12-2]
Length = 222
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 116/192 (60%), Gaps = 10/192 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S F P+ P EIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 29 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 88
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYG+A A +E D W +LV +Y+ RV+LKRV +LID + G+K D
Sbjct: 89 GADLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKKNDE 148
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTKTD + V R + E ++ + V+ SS+ G G+
Sbjct: 149 EVLRLLDKAAVSYQIVLTKTDKIKAAGVPRLIEETLEKIRKRPAAFPTVIATSSEKGEGM 208
Query: 183 RSLRTVLSKIAR 194
LR ++ R
Sbjct: 209 DELREAIALAVR 220
>gi|294085068|ref|YP_003551828.1| GTP-binding protein, HSR1-like protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664643|gb|ADE39744.1| GTP-binding protein, HSR1-related protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 219
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 118/195 (60%), Gaps = 3/195 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ +F AAA + P LPEI FAGRSNVGKSS++NALT + + RTS PG T+ +
Sbjct: 25 GQCDFTAAANNMPALPPMGLPEICFAGRSNVGKSSLVNALTGRRMLARTSQTPGRTRQLI 84
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF LG +L LVDLPGYG+A A + +AW +L +++++ R SL+RV LLID + GV D
Sbjct: 85 FFDLGQRLGLVDLPGYGYASAPKTDIEAWTKLTRKFLAGRQSLQRVFLLIDARRGVGKGD 144
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ L++ S + VLTK D + P + + E ++ + + + + SS++G G
Sbjct: 145 SEIMKLLDESAVSWAAVLTKADKLKPEALEKVCRATEATVATHVAAYPELFVTSSQAGDG 204
Query: 182 IRSLRTVLSKIARFA 196
I LR IA FA
Sbjct: 205 IEHLR---GHIAGFA 216
>gi|378824678|ref|YP_005187410.1| GTP-binding protein EngB [Sinorhizobium fredii HH103]
gi|365177730|emb|CCE94585.1| probable GTP-binding protein EngB [Sinorhizobium fredii HH103]
Length = 217
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 112/184 (60%), Gaps = 10/184 (5%)
Query: 16 FPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG-------- 66
F P+ P EIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F
Sbjct: 28 FLPPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGEADD 87
Query: 67 -TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID + G+K D E++
Sbjct: 88 LPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDARHGIKKNDEEVL 147
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
SL++++ YQ+VLTKTD + V R + + +K + ++ SS+ G GI L
Sbjct: 148 SLLDKAAVSYQIVLTKTDKIKAAGVPRLIAETLDKIKKRPAAYPEILSTSSEKGDGIEDL 207
Query: 186 RTVL 189
R +
Sbjct: 208 RAAI 211
>gi|398819155|ref|ZP_10577716.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bradyrhizobium
sp. YR681]
gi|398230158|gb|EJN16219.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bradyrhizobium
sp. YR681]
Length = 217
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ ++ P D EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 QFIWASPSIATLPPMDGLEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ K L LVD+PGYG+A A + +W EL+ ++ R SL RV +L+D + G+K D
Sbjct: 82 VPGKNDLRLVDMPGYGYAKAPKSQVASWTELIHTFLLGRASLARVYVLVDARHGLKDVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQVVLTK D V ++ R + E +L + + V+ SS+S AG+
Sbjct: 142 EILKTLDRSAVSYQVVLTKADQVKATELESRIAETEAALAKHPAAFPNVLATSSRSSAGM 201
Query: 183 RSLRTVLSKI 192
SLR ++K+
Sbjct: 202 ESLRAAMAKL 211
>gi|367472181|ref|ZP_09471771.1| putative GTP-binding protein engB [Bradyrhizobium sp. ORS 285]
gi|365275531|emb|CCD84239.1| putative GTP-binding protein engB [Bradyrhizobium sp. ORS 285]
Length = 220
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK-- 64
A+ ++S P EIAFAGRSNVGKSS++NALT Q + RTS PG TQ + FF+
Sbjct: 27 HASPSIASLPPMSGQIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELIFFEGP 86
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVD+PGYG+A A + +W EL+ +++ R SL RV +LID + G+K D E+
Sbjct: 87 ANASLRLVDMPGYGYAAAAKTKVASWTELIHQFLLGRTSLARVYVLIDARHGLKEVDQEI 146
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ +++S YQ+VLTK D + P ++A R + E +L + + V+ SS+SG G+
Sbjct: 147 LKTLDKSAVSYQLVLTKADQIKPAELAGRITETEAALAKHPAAFPQVLATSSRSGTGMPE 206
Query: 185 LRTVLSKI 192
LR + ++
Sbjct: 207 LRAAMVRL 214
>gi|328545252|ref|YP_004305361.1| GTPase EngB [Polymorphum gilvum SL003B-26A1]
gi|326414994|gb|ADZ72057.1| GTPase EngB [Polymorphum gilvum SL003B-26A1]
Length = 218
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 19 PDLP--EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL-GTKLCLVDLP 75
PD+ EIAFAGRSNVGKSS++NALT Q + RTS+ PG TQ +NFF G + +VD+P
Sbjct: 36 PDIGSLEIAFAGRSNVGKSSLINALTGQKALARTSNTPGRTQMLNFFGAEGAAVTIVDMP 95
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A A + + DAW +L+ Y+ R +L+RV LLID++ G+K D E + L++++ Y
Sbjct: 96 GYGYAEAPKGMVDAWTDLIFAYLRGRPTLRRVFLLIDSRHGLKSNDLEAMQLLDKAAVVY 155
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLS 190
QVVLTK D + P + R + ++L + +++ SS+ GI SLR ++
Sbjct: 156 QVVLTKADKIKPGQLDRLVVDTAKALAKRPAAHPEILVTSSEKNTGIDSLRAAIA 210
>gi|418296796|ref|ZP_12908639.1| GTP-binding protein YsxC [Agrobacterium tumefaciens CCNWGS0286]
gi|355538971|gb|EHH08213.1| GTP-binding protein YsxC [Agrobacterium tumefaciens CCNWGS0286]
Length = 217
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 9/180 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F + G
Sbjct: 29 LPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGEAGDL 88
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ GVK D E+++
Sbjct: 89 PPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGVKKNDEEVLT 148
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + + V R + E ++ + V+ SS+ G+ SLR
Sbjct: 149 LLDKAAVSYQIVLTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDSLR 208
>gi|126724908|ref|ZP_01740751.1| GTP-binding protein [Rhodobacterales bacterium HTCC2150]
gi|126706072|gb|EBA05162.1| GTP-binding protein [Rhodobacteraceae bacterium HTCC2150]
Length = 216
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 110/188 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF P D E+ FAGRSNVGKS+++NALT + + RTS+ PG TQ INFF
Sbjct: 28 EFLKGVVAMDGMPPADRLEVCFAGRSNVGKSTLINALTGRKALARTSNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYGFA A W+ L+K Y+S R +L+R +LID + GVK D E+
Sbjct: 88 VAESHYLVDLPGYGFAKAPLPTVKKWQALLKAYLSGRQNLRRAFVLIDFRHGVKDVDDEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L+ S +QV+LTK D V D + Q +L + + +++ SS+ G GI +
Sbjct: 148 MQLLNSSAVTFQVILTKADKVKEADREKILAQTRAALAKHPAAYPEILVTSSEKGEGIEN 207
Query: 185 LRTVLSKI 192
LR++++ +
Sbjct: 208 LRSIVNTL 215
>gi|402825696|ref|ZP_10874960.1| GTP-binding protein YsxC [Sphingomonas sp. LH128]
gi|402260734|gb|EJU10833.1| GTP-binding protein YsxC [Sphingomonas sp. LH128]
Length = 209
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P PD PEIAFAGRSNVGKSS+LNAL + + RTS PG TQ +NFF +
Sbjct: 18 FLKSAPSLQFLPDPDAPEIAFAGRSNVGKSSLLNALVGRKAIARTSVTPGRTQELNFFDV 77
Query: 66 GT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
K LVD+PGYGFA A +V + W LV++Y+ RV LKR +LID++ GVK D +
Sbjct: 78 AEPLKFRLVDMPGYGFAKAPPKVVETWRRLVRDYLRGRVELKRTLVLIDSRHGVKQVDLD 137
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDV-ARRAMQIEESLKANNSLVQPVMMV-SSKSGAG 181
++ +++++ Y++VLTK D + ++ A A I E+ K + PV+ V SS+ G G
Sbjct: 138 MMEMLDQAAVGYRLVLTKADKIKASELEAVHAATIAEARKHPAAF--PVVHVTSSEKGLG 195
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 196 IEELRAAV 203
>gi|83594669|ref|YP_428421.1| ribosome biogenesis GTP-binding protein YsxC [Rhodospirillum rubrum
ATCC 11170]
gi|386351433|ref|YP_006049681.1| GTP-binding protein YsxC [Rhodospirillum rubrum F11]
gi|119369247|sp|Q2RP11.1|ENGB_RHORT RecName: Full=Probable GTP-binding protein EngB
gi|83577583|gb|ABC24134.1| GTP-binding [Rhodospirillum rubrum ATCC 11170]
gi|346719869|gb|AEO49884.1| GTP-binding protein YsxC [Rhodospirillum rubrum F11]
Length = 231
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 111/173 (64%), Gaps = 5/173 (2%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK-----L 69
+ P DL EIAFAGRSNVGKSS++NALT + + RTS+ PG TQ +N+F+LG + L
Sbjct: 46 TLPDHDLSEIAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQELNYFRLGPEAQDPAL 105
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
+VDLPGYGFA A ++ W L+ Y+ R +L+RVCLLID++ G+K D +++ +++
Sbjct: 106 MMVDLPGYGFAEAPKDAVKRWTRLIMAYLRGRPALRRVCLLIDSRHGIKENDRDVMRMLD 165
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ YQ+VLTK D + ++ ++ + + V++ SS+SGAGI
Sbjct: 166 EAAVSYQIVLTKADKLKAAEITDVLARVVAETAKHVAAHPDVIVTSSQSGAGI 218
>gi|325291816|ref|YP_004277680.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium sp.
H13-3]
gi|418407909|ref|ZP_12981226.1| GTP-binding protein YsxC [Agrobacterium tumefaciens 5A]
gi|325059669|gb|ADY63360.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium sp.
H13-3]
gi|358005895|gb|EHJ98220.1| GTP-binding protein YsxC [Agrobacterium tumefaciens 5A]
Length = 217
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 9/180 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F + G
Sbjct: 29 LPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDL 88
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ G+K D E++
Sbjct: 89 PPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLG 148
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQVVLTKTD + + V R + E ++ + V+ SS+ G+ SLR
Sbjct: 149 LLDKAAVSYQVVLTKTDKIKDVGVPRLISETLEKIRKRPAAYPEVLATSSEKSFGLDSLR 208
>gi|430001998|emb|CCF17778.1| probable GTP-binding protein engB [Rhizobium sp.]
Length = 220
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 119/196 (60%), Gaps = 10/196 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S F P+ P E+AFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F
Sbjct: 25 SLKFLPPEGPLEVAFAGRSNVGKSSLINALVGHRGLARTSNTPGRTQELNYFVPEGYSGE 84
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 85 GGDLPPMALVDMPGYGYAQAPKDQVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDE 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTKTD + V R + E ++ + ++ SS+ G G+
Sbjct: 145 EVLDLLDKAAVSYQIVLTKTDKIKEAGVPRLISETTEKIRKRPAAYPEIIATSSEKGKGL 204
Query: 183 RSLRTVLSKIARFAKV 198
LR +++ ++ V
Sbjct: 205 DELRHTIARTVGYSTV 220
>gi|418055470|ref|ZP_12693525.1| GTP-binding protein engB [Hyphomicrobium denitrificans 1NES1]
gi|353211052|gb|EHB76453.1| GTP-binding protein engB [Hyphomicrobium denitrificans 1NES1]
Length = 218
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-KLGTKLCLVDL 74
P D PEIAFAGRSNVGKSS++N L Q + R S+ PG TQ +NFF L LVD+
Sbjct: 35 LPPDDRPEIAFAGRSNVGKSSLINTLVGQRALARASNTPGRTQELNFFTDPAADLYLVDM 94
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A ++ AW ++ Y+S R +L RV +L+D + G+KP D E++ L++ +
Sbjct: 95 PGYGFAEAPKDKVAAWNRTLRGYLSGRRTLLRVFVLVDARHGLKPVDDEIMGLLDSAAVS 154
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
YQV+LTK D + D+ R +SL + + V+ S+++ G LR V++K+
Sbjct: 155 YQVILTKADKISRTDLDRVMAHTIQSLSKHPAAYPHVIATSAETAMGFEDLRAVVAKL 212
>gi|319780375|ref|YP_004139851.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317166263|gb|ADV09801.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 219
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--------- 66
P PEIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 30 LPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGADL 89
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
L LVD+PGYG+A A +E D W +LV +Y+ RV+LKRV +LID + G+K +D E++S
Sbjct: 90 PPLALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLS 149
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + V R + +K + V+ SS+ G+ L+
Sbjct: 150 LLDKAAVSYQIVLTKTDKIKTAGVPRLIEETLAKIKKRPAAFPFVLATSSEKAEGLEELQ 209
Query: 187 TVL 189
+
Sbjct: 210 AAI 212
>gi|383644600|ref|ZP_09957006.1| GTP-binding protein YsxC [Sphingomonas elodea ATCC 31461]
Length = 211
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P P +PEIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF
Sbjct: 19 ITFLKSAPALEHLPQPTVPEIAFAGRSNVGKSSLINALTNRNSLARTSVTPGRTQELNFF 78
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYGFA A +++ W LV +Y+ R LKR +LID++ G+K D
Sbjct: 79 DVGEPLRFRLVDMPGYGFAKAPKDMVRKWRYLVNDYLRGRQELKRALVLIDSRHGIKDVD 138
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ +++ + Y++VLTKTD + ++A + E + + ++ SS G G
Sbjct: 139 REILEMLDAAAVSYRLVLTKTDKIKASELAEVTARTVEEARKRAAAHPEILATSSDKGMG 198
Query: 182 IRSLRTVL 189
+ LR +
Sbjct: 199 LPELRAAV 206
>gi|197103855|ref|YP_002129232.1| ribosome biogenesis GTP-binding protein YsxC [Phenylobacterium
zucineum HLK1]
gi|196477275|gb|ACG76803.1| GTP-binding protein CgpA [Phenylobacterium zucineum HLK1]
Length = 213
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 112/186 (60%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ + F A S P PDLPE+AFAGRSNVGKSS++NA+T + + R S++PG T+ +N
Sbjct: 20 HPVRFLMGAVAISGLPDPDLPEVAFAGRSNVGKSSLINAVTGRKDLARASNEPGRTREVN 79
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF KL LVDLPGYG+A A + V ++ L ++Y+ R +LKRV LLID + G+K D
Sbjct: 80 FFVADEKLRLVDLPGYGWARASKSVARKFQNLGRDYLRGRPNLKRVYLLIDARHGLKDVD 139
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E + ++ + YQ+VLTK D + +V + + + + + V+ SS+ G G
Sbjct: 140 KEALDALDVAAVSYQIVLTKADKLRAAEVEKVVAETLQKVSKRPAAFPRVLATSSEKGTG 199
Query: 182 IRSLRT 187
I LR
Sbjct: 200 IPELRA 205
>gi|103485501|ref|YP_615062.1| ribosome biogenesis GTP-binding protein YsxC [Sphingopyxis
alaskensis RB2256]
gi|119369262|sp|Q1GN74.1|ENGB_SPHAL RecName: Full=Probable GTP-binding protein EngB
gi|98975578|gb|ABF51729.1| GTP-binding [Sphingopyxis alaskensis RB2256]
Length = 219
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P P +PEIAFAGRSNVGKSS+LNALT + G+ RTS PG TQ +N+F
Sbjct: 26 IAFLKSAPALQHLPVPSVPEIAFAGRSNVGKSSLLNALTNRNGLARTSVTPGRTQELNYF 85
Query: 64 KLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G LVD+PGYGFA A ++V W L+ +Y+ R LKR +LID++ G+K D
Sbjct: 86 DVGEPPVFRLVDMPGYGFAKAPKDVVRKWRFLINDYLRGRQVLKRTLVLIDSRHGIKDVD 145
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ +++ + Y++VLTK D + +A E + + + V+ SS+ G G
Sbjct: 146 RDVLEMLDTAAVSYRLVLTKADKIKASALADVHAATEAEARKHPAAHPEVIATSSEKGMG 205
Query: 182 IRSLRTVL 189
I LRT +
Sbjct: 206 IAELRTAV 213
>gi|326386368|ref|ZP_08207991.1| GTPase EngB [Novosphingobium nitrogenifigens DSM 19370]
gi|326209029|gb|EGD59823.1| GTPase EngB [Novosphingobium nitrogenifigens DSM 19370]
Length = 221
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++EF +A P P+ PEIAFAGRSNVGKSS++NA+T + + R S PG TQ +N
Sbjct: 26 GRVEFLKSAPSLQFIPDPEEPEIAFAGRSNVGKSSLINAITGRKSIARASVTPGRTQELN 85
Query: 62 FFKLG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
+F++G T + LVD+PGYGFA A +V + W LV++++ R LKR LLID + GVKP
Sbjct: 86 WFEVGNPTSIRLVDMPGYGFAKAPPKVVEQWRRLVRDFLRGRTVLKRTLLLIDARHGVKP 145
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
D E++ +++ + Y++VLTK D + ++A E + + + V++ S++
Sbjct: 146 VDVEMMQMLDEAAVGYRLVLTKADKIKAEELAAVHAATEAVARKHIAAYPGVLVTSAEKR 205
Query: 180 AGIRSLRTVL 189
+GI +LR +
Sbjct: 206 SGIAALRAAI 215
>gi|88607557|ref|YP_505024.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma
phagocytophilum HZ]
gi|119368790|sp|Q2GKS7.1|ENGB_ANAPZ RecName: Full=Probable GTP-binding protein EngB
gi|88598620|gb|ABD44090.1| putative GTP-binding protein EngB [Anaplasma phagocytophilum HZ]
Length = 193
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 113/186 (60%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A + SFP +PE+AFAGRSNVGKSS++NA+T +TS PG T+ INF+
Sbjct: 6 FVAGVQDRKSFPDFGVPEVAFAGRSNVGKSSLINAITNNKKNAKTSSNPGSTRQINFYLN 65
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ LVDLPGYG++ A +E + ++++ Y+ +R +L+R+ LLID++ G+K D + +
Sbjct: 66 KGIVALVDLPGYGYSKASKEATRGYLDVMEHYLMSREALQRLVLLIDSRIGLKEIDRDFL 125
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+E Y +VLTK D + + ++ + N L+QP+M VSSKSG GIR L
Sbjct: 126 CWLEEHGIYYSIVLTKADKLSEQALGSMVSFVQNQAQGGNFLLQPIMWVSSKSGRGIREL 185
Query: 186 RTVLSK 191
+S+
Sbjct: 186 AHEISR 191
>gi|15887733|ref|NP_353414.1| GTP-binding protein [Agrobacterium fabrum str. C58]
gi|24418376|sp|Q8UIB4.1|ENGB_AGRT5 RecName: Full=Probable GTP-binding protein EngB
gi|15155296|gb|AAK86199.1| GTP-binding protein [Agrobacterium fabrum str. C58]
Length = 217
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 9/180 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F + G
Sbjct: 29 LPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDL 88
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ G+K D E++S
Sbjct: 89 PPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLS 148
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQVVLTKTD + + V R + E ++ + V+ SS+ G+ LR
Sbjct: 149 LLDKAAVSYQVVLTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLR 208
>gi|335033117|ref|ZP_08526489.1| GTPase EngB [Agrobacterium sp. ATCC 31749]
gi|333795793|gb|EGL67118.1| GTPase EngB [Agrobacterium sp. ATCC 31749]
Length = 217
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 9/180 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F + G
Sbjct: 29 LPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDL 88
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ G+K D E++S
Sbjct: 89 PPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLS 148
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQVVLTKTD + + V R + E ++ + V+ SS+ G+ LR
Sbjct: 149 LLDKAAVSYQVVLTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLR 208
>gi|456358356|dbj|BAM92801.1| ribosome biogenesis GTP-binding protein YsxC [Agromonas
oligotrophica S58]
Length = 218
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 116/190 (61%), Gaps = 4/190 (2%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A+ S P E+AFAGRSNVGKSS++NALT Q + RTS PG TQ + FF+
Sbjct: 24 FTHASPSIESLPPMGSLEVAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELIFFE- 82
Query: 66 GTK---LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G + L LVD+PGYG+A A + +W EL+ +++ R SL RV +LID + G+K D
Sbjct: 83 GPEYAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLLGRTSLARVYVLIDARHGLKEVDQ 142
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQ++LTK D + P ++A R + E +L + + V+ SS+SG G+
Sbjct: 143 EILKTLDRSAVSYQLILTKADQIKPAELASRIAETEAALAKHPAAFPQVLATSSRSGTGM 202
Query: 183 RSLRTVLSKI 192
LR + ++
Sbjct: 203 PELRAAMVRL 212
>gi|163757862|ref|ZP_02164951.1| GTPase EngB [Hoeflea phototrophica DFL-43]
gi|162285364|gb|EDQ35646.1| GTPase EngB [Hoeflea phototrophica DFL-43]
Length = 225
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--------- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F G
Sbjct: 37 LPPEGPPEIAFAGRSNVGKSSLINALVGAKGLARTSNTPGRTQELNYFVPGGYSGAEDDL 96
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A +E D W +LV +Y+ R +LKRV LLID++ G+K D E++
Sbjct: 97 PPMALVDMPGYGYAKAPKEQVDLWTKLVFDYMRGRSTLKRVYLLIDSRHGIKKNDEEVMD 156
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQVVLTKTD + V R + LK + V+ SS+ G+ LR
Sbjct: 157 LLDKAAMSYQVVLTKTDKIKEAGVPRLIGETLNKLKRRPAAYPEVLATSSEKANGVDDLR 216
Query: 187 TVLS 190
++
Sbjct: 217 IAIA 220
>gi|114327391|ref|YP_744548.1| ribosome biogenesis GTP-binding protein YsxC [Granulibacter
bethesdensis CGDNIH1]
gi|119369200|sp|Q0BU77.1|ENGB_GRABC RecName: Full=Probable GTP-binding protein EngB
gi|114315565|gb|ABI61625.1| GTP-binding protein YihA [Granulibacter bethesdensis CGDNIH1]
Length = 223
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 116/187 (62%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
FF + P P EIAFAGRSNVGKS+++NALT + + R S +PG T+ +NFF L
Sbjct: 35 FFHGTQRLDQLPPPMGVEIAFAGRSNVGKSTLVNALTGRKTLARASSQPGRTKQLNFFNL 94
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+L LVD+PGYG+A A ++VK+ W+ L+ Y+ R +L+RV LL+D + K D ++
Sbjct: 95 ADQLVLVDMPGYGYAQAAKDVKEDWQGLMFSYLRGRPNLRRVMLLVDARVEFKASDIAVM 154
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
L++++ +Q+V+TK D V P + RR + + +A+ + V + SS +G+GI L
Sbjct: 155 ELLDKAAVTFQLVVTKADAVKPTPLQRRVADVYAAARAHPAAHPHVFVTSSDTGSGIAEL 214
Query: 186 RTVLSKI 192
R L+ +
Sbjct: 215 RAALAGL 221
>gi|114569008|ref|YP_755688.1| ribosome biogenesis GTP-binding protein YsxC [Maricaulis maris
MCS10]
gi|119369211|sp|Q0ASI7.1|ENGB_MARMM RecName: Full=Probable GTP-binding protein EngB
gi|114339470|gb|ABI64750.1| GTP-binding protein [Maricaulis maris MCS10]
Length = 191
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL-GTKLCLV 72
P PD E+AFAGRSNVGKSS++NALT Q G+ R S +PG T+ +NFF + G L +V
Sbjct: 7 DHLPEPDRLEVAFAGRSNVGKSSLINALTNQKGLARASGEPGRTRELNFFNVEGGDLRIV 66
Query: 73 DLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQ 132
DLPGYG+A A + V + W L K ++ RV+LKRV LLID++ G+K D +++ + + +
Sbjct: 67 DLPGYGYAKAPKPVVEKWTRLTKAFLRGRVNLKRVYLLIDSRHGLKDVDLKIMDVFDEAA 126
Query: 133 TKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
YQVVLTKTD + P V R + E + + V+ SS G+ LR
Sbjct: 127 VSYQVVLTKTDKIKPPAVKRLIGETGEKIARRPAAFPRVIATSSAKQDGVDQLRA 181
>gi|154250754|ref|YP_001411578.1| ribosome biogenesis GTP-binding protein YsxC [Parvibaculum
lavamentivorans DS-1]
gi|154154704|gb|ABS61921.1| GTP-binding protein HSR1-related [Parvibaculum lavamentivorans
DS-1]
Length = 235
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F P+ + E+AFAGRSNVGKSS++NALT + + RTS+ PG T+ +NFF
Sbjct: 32 DFVRGVVAMDGLPSTTITEVAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTKELNFFA 91
Query: 65 LGTK----LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
LGT + LVDLPGYG+A D W +L+ Y+ RV L+RV +LID + G+K
Sbjct: 92 LGTSGNPAIMLVDLPGYGYARETRTRVDQWTDLIMAYLRGRVPLRRVLVLIDARHGLKDN 151
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
DH +++L++ + YQ+VLTK D + ++ R ++ ++ + + ++ SS+ G
Sbjct: 152 DHSVMTLLDEAAVSYQIVLTKIDKLKAGELETRLDEVRAGIRRHVAAHPRIVATSSEKGT 211
Query: 181 GIRSLRTVLSKIA 193
GI LR ++ +A
Sbjct: 212 GIAELRAEIASLA 224
>gi|399075629|ref|ZP_10751639.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Caulobacter sp.
AP07]
gi|398038584|gb|EJL31741.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Caulobacter sp.
AP07]
Length = 213
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A P P LPE+AFAGRSNVGKSS++N L Q + R S+ PG T+ +NFF L
Sbjct: 24 FMMGAVKMDGMPPPVLPEVAFAGRSNVGKSSLINGLVGQNHLARASNSPGRTREVNFFVL 83
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+L LVDLPGYGFA V D +++L + Y+ R +LKRV LLID + G+K D E +
Sbjct: 84 AEQLRLVDLPGYGFARVSRSVADKFQDLGRAYLRGRANLKRVYLLIDARHGLKSVDTEAL 143
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
++ + YQ+VLTK D + P +V +++ + V+ SS+ G G+ L
Sbjct: 144 DALDVAAVSYQIVLTKADKMKPAEVEATVAATLKAIAKRPAAFPKVLATSSEKGFGLPEL 203
Query: 186 RTVLSK 191
R +++
Sbjct: 204 RAEIAR 209
>gi|395765738|ref|ZP_10446330.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella sp. DB5-6]
gi|395410933|gb|EJF77475.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella sp. DB5-6]
Length = 215
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 118/188 (62%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLGT- 67
P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F +LG
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGQLGDL 86
Query: 68 -KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW EL+ Y+ R +LKRV +LID++ G+K D +++
Sbjct: 87 PPIALVDMPGYGFAEAPKNLVDAWTELIFNYLRGRTTLKRVYVLIDSRHGIKKNDSDVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + + + + L + + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKSNVLEKLIITTKTHLLKHPAAYPELLVTSSEKALGLEELR 206
Query: 187 T-VLSKIA 193
T +L IA
Sbjct: 207 TAILQAIA 214
>gi|420244667|ref|ZP_14748413.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
CF080]
gi|398052589|gb|EJL44843.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
CF080]
Length = 219
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 116/189 (61%), Gaps = 10/189 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P E+AFAGRSNVGKSS++NAL Q + RTS+ PG TQ +N+F
Sbjct: 25 SMKFLPPEGPLEVAFAGRSNVGKSSLINALVGQKALARTSNTPGRTQELNYFVPDGYSGA 84
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV LLID++ GVK D
Sbjct: 85 SGDLPPMALVDMPGYGYAQAPKENVDAWTKLVFDYLRGRATLKRVYLLIDSRHGVKKNDD 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTKTD + V + + +E ++ + V+ SS+ G GI
Sbjct: 145 EVLDLLDKAAVSYQIVLTKTDKIKEPAVVKLLEETQEKIRKRPAAFPFVLSTSSEKGKGI 204
Query: 183 RSLRTVLSK 191
LR +++
Sbjct: 205 DELRQAIAE 213
>gi|365901524|ref|ZP_09439362.1| putative GTP-binding protein engB [Bradyrhizobium sp. STM 3843]
gi|365417717|emb|CCE11904.1| putative GTP-binding protein engB [Bradyrhizobium sp. STM 3843]
Length = 219
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 117/192 (60%), Gaps = 2/192 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F AA ++ P E+AFAGRSNVGKSS++NALT Q + RTS PG TQ + FF+
Sbjct: 24 HFTHAAPSIAALPPMGAMEVAFAGRSNVGKSSLINALTGQTTLARTSHTPGRTQELIFFE 83
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
K L LVD+PGYG+A A + +W L+ +++ R SL RV +LID + G+K D
Sbjct: 84 GPDKVPLRLVDMPGYGYAAAPKTKVASWTALIHQFLLGRASLARVYVLIDARHGLKEVDQ 143
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E+++ +++S YQ+VLTK D + P ++A R + E +L + + V+ SS++ G+
Sbjct: 144 EVLTTLDKSAVSYQLVLTKADQIKPAELAARVAETEAALARHPAAFPQVLATSSRAATGM 203
Query: 183 RSLRTVLSKIAR 194
LR ++++ R
Sbjct: 204 AELRAAMARLLR 215
>gi|84515674|ref|ZP_01003035.1| GTP-binding protein [Loktanella vestfoldensis SKA53]
gi|84510116|gb|EAQ06572.1| GTP-binding protein [Loktanella vestfoldensis SKA53]
Length = 215
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
P D E+ FAGRSNVGKSS++NALT + G+ R S+ PG TQ INFF G + +VDL
Sbjct: 38 GLPPADRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTAG-DIYVVDL 96
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A V + W+ L+K+Y+ R +L+RV +LID + G K D E++SL++ S
Sbjct: 97 PGYGFANAPVAVVEKWQRLLKQYLQGRQTLRRVFVLIDARHGAKAVDEEIMSLLDASAVT 156
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
+QVV+TK D + +A + +L + + +++ S++ G GI +LR +++ I+
Sbjct: 157 FQVVMTKVDKLRGDALAESLAKTRAALVKHPAAYPELILTSAEKGEGIPTLRAIIAGIS 215
>gi|83950485|ref|ZP_00959218.1| GTP-binding protein [Roseovarius nubinhibens ISM]
gi|83838384|gb|EAP77680.1| GTP-binding protein [Roseovarius nubinhibens ISM]
Length = 216
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 113/192 (58%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ +++F S P D E+ FAGRSNVGKSS++NALT + + R S+ PG TQ +
Sbjct: 24 LGEVDFLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEV 83
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + LVDLPGYG+A A + W+ L+K Y+S R +L+R +LID + GVK
Sbjct: 84 NFFTMADSHYLVDLPGYGYANAPLPIVAKWQALLKSYLSGRANLRRAFVLIDARHGVKAV 143
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E+++L++ S +Q VLTK D V + + Q+ L + + +++ SS+ G
Sbjct: 144 DEEIMALLDSSAVTFQTVLTKADKVKEAEREKILTQVRSRLATHPAAFPELIVTSSEKGW 203
Query: 181 GIRSLRTVLSKI 192
GI +LR ++ +
Sbjct: 204 GIPTLRATIASL 215
>gi|90419895|ref|ZP_01227804.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
gi|90335936|gb|EAS49684.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
Length = 226
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF---KLGTK---- 68
P PEIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +NFF G +
Sbjct: 39 LPPEGPPEIAFAGRSNVGKSSLINALLAQKGLARTSNTPGRTQELNFFVPDGYGGETAEL 98
Query: 69 --LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ +VD+PGYG+A A ++ DAW +LV Y+ R SLKRV LLID + G+K D E++
Sbjct: 99 PPIAVVDMPGYGYAKAPKDHVDAWTKLVFSYLRGRASLKRVFLLIDARHGIKKNDEEVMG 158
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + V + +K + + ++ SS+ G G+ L+
Sbjct: 159 LLDKAAVSYQIVLTKTDKIKATGVPKLIEATALGIKRHPAAFPRILSTSSEKGVGLDELK 218
Query: 187 TVLSKIA 193
++ +A
Sbjct: 219 AEIAALA 225
>gi|148258512|ref|YP_001243097.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium sp.
BTAi1]
gi|146410685|gb|ABQ39191.1| putative GTP-binding protein engB [Bradyrhizobium sp. BTAi1]
Length = 220
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
A+ ++S P EIAFAGRSNVGKSS++NALT Q + RTS PG TQ + FF+
Sbjct: 27 HASPSIASLPPMSGQIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELIFFEGP 86
Query: 67 --TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVD+PGYG+A A + +W +L+ +++ R SL RV +LID + G+K D E+
Sbjct: 87 DYAPLRLVDMPGYGYAAAAKTKVASWTKLIHQFLLGRASLARVYVLIDARHGLKEVDQEI 146
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++RS YQ+VLTK D V P ++A R + E +L + + V+ SS+SG G+
Sbjct: 147 FKTLDRSAVSYQLVLTKADQVKPPELAARIAETEAALAKHPAAFPQVLATSSRSGTGMPE 206
Query: 185 LRTVLSKI 192
LR ++++
Sbjct: 207 LRAAMARL 214
>gi|389694014|ref|ZP_10182108.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Microvirga sp.
WSM3557]
gi|388587400|gb|EIM27693.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Microvirga sp.
WSM3557]
Length = 218
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 113/188 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F AA + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF
Sbjct: 24 DFIWAANSLKNLPPMSKVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRTQQLNFFN 83
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVD+PGYG+A ++ AW +L+ +Y+ R SL RV +LID + G+KP D +
Sbjct: 84 VNDRFHLVDMPGYGYAAVDKQKVAAWTQLIHDYLRGRASLARVYVLIDARHGIKPVDEAV 143
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ + + YQ+VLTK D + P ++ +R + ++ + ++ SS++G GI
Sbjct: 144 LETLGTAAVSYQIVLTKADELKPDELDKRMADTLQKIEKRAAAFPEILPTSSRTGFGIPE 203
Query: 185 LRTVLSKI 192
LR ++++
Sbjct: 204 LRAGIARL 211
>gi|395767401|ref|ZP_10447936.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella doshiae
NCTC 12862]
gi|395414714|gb|EJF81156.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella doshiae
NCTC 12862]
Length = 215
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 9/193 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-- 63
F S P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F
Sbjct: 17 FIRGVPTISFLPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVP 76
Query: 64 -------KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
K L LVD+PGYGFA A + + DAW LV Y+ R +LKRV +LID++ G
Sbjct: 77 DGFSGQPKNLPPLALVDMPGYGFAKAPKNLVDAWTHLVFSYLRGRTTLKRVYILIDSRHG 136
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+K D E++ L++++ YQVVLTK+D + + + + + L + +++ SS
Sbjct: 137 IKKNDAEVLDLLDKAAVSYQVVLTKSDKIKSNVLEKLIINTKTKLLKRPAAYPELLVTSS 196
Query: 177 KSGAGIRSLRTVL 189
+ G+ LRT +
Sbjct: 197 EKALGLEELRTAI 209
>gi|114770123|ref|ZP_01447661.1| GTP-binding protein [Rhodobacterales bacterium HTCC2255]
gi|114548960|gb|EAU51843.1| GTP-binding protein [alpha proteobacterium HTCC2255]
Length = 216
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 109/185 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F P D E+ FAGRSNVGKSS++NALT + + RTS+ PG TQ INFF
Sbjct: 28 DFLKGVVGMDGMPPADRMEVCFAGRSNVGKSSLINALTGRKSLARTSNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVD+PGYGFA A V W+ L+K Y+S R SL+RV LLID++ GVK D E+
Sbjct: 88 LSESHYLVDVPGYGFANAPLPVVKKWQTLLKAYLSGRASLRRVFLLIDSRHGVKSVDEEI 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L+ RS +QVVLTK+D D+ + + + + ++ SS+ G GI +
Sbjct: 148 MELLGRSAVTFQVVLTKSDKPKKNDLEKVISETGRIVAKYPAAYPEFVLTSSEKGDGIPT 207
Query: 185 LRTVL 189
LR ++
Sbjct: 208 LRHII 212
>gi|395492517|ref|ZP_10424096.1| GTP-binding protein YsxC [Sphingomonas sp. PAMC 26617]
Length = 211
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P +PE+AFAGRSNVGKSS+LNALT + + RTS+ PG TQ +NFF +
Sbjct: 21 FLKSAPALEFLPNAVVPEVAFAGRSNVGKSSLLNALTHRNSLARTSNTPGRTQELNFFDV 80
Query: 66 GTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
GT L LVD+PGYGFA A +++ W LV +++ R LKR +LID++ G+K D E
Sbjct: 81 GTPLAFRLVDMPGYGFAKAPKDIVRKWRFLVNDFLRGRDVLKRALVLIDSRHGIKDVDRE 140
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ +++++ Y++VLTK D + D+A + + +++ SS +G GI
Sbjct: 141 ILEMLDKAAVSYRMVLTKADKIKASDLAEVTEATAAEARKRPAAHPDILVTSSDTGLGIP 200
Query: 184 SLRTVL 189
LR +
Sbjct: 201 ELRAAV 206
>gi|407788370|ref|ZP_11135502.1| GTP-binding protein YsxC [Celeribacter baekdonensis B30]
gi|407197651|gb|EKE67705.1| GTP-binding protein YsxC [Celeribacter baekdonensis B30]
Length = 215
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF P D E+ FAGRSNVGKSS++NALT + R S+ PG TQ INFF
Sbjct: 27 EFVKGVVAMDGMPPDDRLEVCFAGRSNVGKSSLINALTGHKALARASNTPGRTQEINFFT 86
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LVDLPGYG+A A + + W+ L+K Y+S R +L+R +LID++ GVK D E+
Sbjct: 87 ASDSHYLVDLPGYGYAKAPIQTVEKWQRLLKAYLSGRATLRRAFVLIDSRHGVKSVDEEI 146
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ +++S +QVVLTK D V ++ A Q+ ++ + + +++ SS+ G GI
Sbjct: 147 MDRLDKSAVTFQVVLTKADKVKEVERAAILEQVRTAVAKHPAAYPELIVTSSEKGWGIDV 206
Query: 185 LRTVLSKI 192
LR V++ +
Sbjct: 207 LRAVIATL 214
>gi|399044421|ref|ZP_10738069.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
CF122]
gi|398057200|gb|EJL49174.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
CF122]
Length = 219
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S F P+ P E+AFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F
Sbjct: 23 SLKFLPPEGPLEVAFAGRSNVGKSSLINALVSHKGLARTSNTPGRTQELNYFVPEGYSGE 82
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ GVK D
Sbjct: 83 GGDLPPMALVDMPGYGYAQAPKDQVDAWTKLVFDYLRGRATLKRVYVLIDSRHGVKKNDD 142
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTKTD + P V + + E +K + ++ SS+ G+
Sbjct: 143 EVLDLLDKAAVSYQIVLTKTDKIKPPAVTKLLAETTEKIKKRPAAYPGIIATSSEKSEGL 202
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 203 DDLREAIAQTVGIA 216
>gi|395777807|ref|ZP_10458321.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella
elizabethae Re6043vi]
gi|423715733|ref|ZP_17689954.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella
elizabethae F9251]
gi|395418592|gb|EJF84914.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella
elizabethae Re6043vi]
gi|395429247|gb|EJF95316.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella
elizabethae F9251]
Length = 214
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLGT- 67
P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGQQGDL 86
Query: 68 -KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVD+PGYGFA A + + DAW L+ Y+ R +LKRV LLID++ G+K D ++++
Sbjct: 87 PPFALVDMPGYGFAAAPKNLVDAWTNLIFSYLRGRTTLKRVYLLIDSRHGIKNNDEDVLA 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + + M + L + ++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKSNALEKLMMTTQTKLLKRPAAYPEILATSSEKAYGLEELR 206
Query: 187 T-VLSKIA 193
T +L IA
Sbjct: 207 TAILQTIA 214
>gi|402851812|ref|ZP_10899940.1| GTP-binding protein EngB [Rhodovulum sp. PH10]
gi|402497920|gb|EJW09704.1| GTP-binding protein EngB [Rhodovulum sp. PH10]
Length = 205
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F AA + P EIAFAGRSNVGKSS++NALT + G+ RTS+ PG TQ + FF
Sbjct: 13 QFVAACGSLPALPKMTGVEIAFAGRSNVGKSSLVNALTGRDGLARTSNTPGRTQELIFFS 72
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G +L LVD+PGYG+A A + AW EL++ Y+ R +L RV +LID + G+K D +
Sbjct: 73 AGGRLRLVDMPGYGYAEAPKSKVAAWTELIRAYLRGRANLARVYVLIDARHGLKTTDDPV 132
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVAR-RAMQIEESLKANNSLVQP-VMMVSSKSGAGI 182
+ L++ + YQ+VLTK D + + AR + ++ ++ A + P V++ +S++GAG+
Sbjct: 133 LDLLDEAAVSYQIVLTKADQI--KEPARPKILEATQAALAKRTAAYPEVLLTASRTGAGM 190
Query: 183 RSLRTVLSKI 192
LR ++++
Sbjct: 191 GELRAAVARL 200
>gi|409435842|ref|ZP_11263050.1| putative GTP-binding protein engB [Rhizobium mesoamericanum
STM3625]
gi|408752600|emb|CCM74197.1| putative GTP-binding protein engB [Rhizobium mesoamericanum
STM3625]
Length = 219
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P E+AFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F +
Sbjct: 23 SLKFLPPEGPLEVAFAGRSNVGKSSLINALVSHKGLARTSNTPGRTQELNYFVPEGYSGE 82
Query: 65 LGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G + LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ GVK D
Sbjct: 83 AGDLPPMALVDMPGYGYAQAPKDQVDAWTKLVFDYLRGRATLKRVYVLIDSRHGVKKNDD 142
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTKTD + P V + E +K + ++ SS+ G+
Sbjct: 143 EVLDLLDKAAVSYQIVLTKTDKIKPPAVTKLLADTTEKIKKRPAAYPGIIATSSEKSEGL 202
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 203 DDLREAIAQTVGIA 216
>gi|239832646|ref|ZP_04680975.1| GTP-binding conserved hypothetical protein [Ochrobactrum
intermedium LMG 3301]
gi|444311620|ref|ZP_21147225.1| GTP-binding protein YsxC [Ochrobactrum intermedium M86]
gi|239824913|gb|EEQ96481.1| GTP-binding conserved hypothetical protein [Ochrobactrum
intermedium LMG 3301]
gi|443485050|gb|ELT47847.1| GTP-binding protein YsxC [Ochrobactrum intermedium M86]
Length = 268
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 115/195 (58%), Gaps = 10/195 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F
Sbjct: 74 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVNKKGLARTSNTPGRTQELNYFVPDGYSGE 133
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 134 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 193
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 194 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGVGL 253
Query: 183 RSLRTVLSKIARFAK 197
LR ++++ + A+
Sbjct: 254 DELRAAIARLIKEAR 268
>gi|408787248|ref|ZP_11198979.1| GTP-binding protein YsxC [Rhizobium lupini HPC(L)]
gi|424909316|ref|ZP_18332693.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845347|gb|EJA97869.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408486879|gb|EKJ95202.1| GTP-binding protein YsxC [Rhizobium lupini HPC(L)]
Length = 217
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 9/180 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--------- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F
Sbjct: 29 LPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGAEGDL 88
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ GVK D E+++
Sbjct: 89 PPMALVDMPGYGYAQAPKDQVDAWTKLVFDYLRGRATLKRVYVLIDSRHGVKKNDEEVLT 148
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + V R + E ++ + V+ SS+ G+ +LR
Sbjct: 149 LLDKAAVSYQIVLTKTDKIKDAGVPRLIGETLEKIRKRPAAYPEVLATSSEKSVGLDNLR 208
>gi|240850502|ref|YP_002971901.1| GTP-ase EngB [Bartonella grahamii as4aup]
gi|240267625|gb|ACS51213.1| GTP-ase EngB [Bartonella grahamii as4aup]
Length = 214
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLGT- 67
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F +LG
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRTQELNYFVPDGFSGQLGDL 86
Query: 68 -KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
L LVD+PGYGFA A + + DAW L+ Y+ R +LKRV +LID++ G+K D +++S
Sbjct: 87 PPLALVDMPGYGFAAAPKNLVDAWTNLIFSYLRGRTTLKRVYILIDSRHGIKNNDEDVLS 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + + M + L + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKSNALEKLIMSTQTKLLKRPAAYPELLVTSSEKALGLEELR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQTIA 214
>gi|440225385|ref|YP_007332476.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium tropici
CIAT 899]
gi|440036896|gb|AGB69930.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium tropici
CIAT 899]
Length = 219
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 9/184 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F + G
Sbjct: 29 LPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGFSGEAGDL 88
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV +LID++ G+K D E++
Sbjct: 89 PPMALVDMPGYGYAEAPKDQVDAWTKLVFDYLRGRTTLKRVYVLIDSRHGIKKNDAEVLD 148
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + + + E ++ + ++ SS+ G G++ LR
Sbjct: 149 LLDKAAVSYQIVLTKTDKIKEAGIPKLLADTAEKIRKRPAAYPGILATSSEKGLGLQELR 208
Query: 187 TVLS 190
+
Sbjct: 209 EAIG 212
>gi|126734529|ref|ZP_01750275.1| GTP-binding protein [Roseobacter sp. CCS2]
gi|126715084|gb|EBA11949.1| GTP-binding protein [Roseobacter sp. CCS2]
Length = 215
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 114/188 (60%), Gaps = 1/188 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F P D E+ FAGRSNVGKSS++NA+T + G+ R S+ PG TQ INFF
Sbjct: 28 DFVKGVVAMDGLPPADRVEVCFAGRSNVGKSSLINAITGRKGLARASNTPGRTQEINFFT 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
G + +VDLPGYGFA A V + W+ L+K+Y+ R +L+RV +LID + G K D E+
Sbjct: 88 AG-DIYVVDLPGYGFATAPVAVVEKWQRLLKQYLQGRQTLRRVFVLIDARHGAKAVDEEI 146
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+SL++ S +QVV+TK D + + + +L + + +++ SS+ G GI++
Sbjct: 147 MSLLDSSAVTFQVVMTKVDKLKGEALQASLDKTRAALAKHPAAFPELILTSSEKGDGIKT 206
Query: 185 LRTVLSKI 192
LR +++ I
Sbjct: 207 LRAIIAGI 214
>gi|393764786|ref|ZP_10353387.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium sp.
GXF4]
gi|392729782|gb|EIZ87046.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium sp.
GXF4]
Length = 217
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%)
Query: 11 KVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLC 70
+V P + EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF++G +L
Sbjct: 30 QVLDRIPPMEGVEIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFFRIGDRLS 89
Query: 71 LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMER 130
LVD+PGYG+A ++ +AW +L+ Y+ R +L RV +LID + G K D +++ +++
Sbjct: 90 LVDMPGYGYAAVEKAKVEAWTKLIHAYLKGRANLARVFMLIDARHGFKSIDTDVLDGLDK 149
Query: 131 SQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLS 190
+ YQVVLTK D++ ++ R I+ L + V++ SS+ G+ LR ++
Sbjct: 150 AAVSYQVVLTKGDSLKKGEIESRIAGIQAGLAKRPAAFPQVILTSSRDDLGVPELRAAIA 209
Query: 191 KI 192
++
Sbjct: 210 RL 211
>gi|421588124|ref|ZP_16033446.1| GTP-binding protein YsxC [Rhizobium sp. Pop5]
gi|403707238|gb|EJZ22286.1| GTP-binding protein YsxC [Rhizobium sp. Pop5]
Length = 217
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 119/194 (61%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GNDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDE 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQVVLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLTLLDKAAVSYQVVLTKTDKIKAPAVPKLLAETAEKIRKRPAAYPAVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 201 NDLRQAIAETVGIA 214
>gi|304392401|ref|ZP_07374342.1| ribosome biogenesis GTP-binding protein YsxC [Ahrensia sp. R2A130]
gi|303295505|gb|EFL89864.1| ribosome biogenesis GTP-binding protein YsxC [Ahrensia sp. R2A130]
Length = 233
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 7/178 (3%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK------- 68
P PEIAFAGRSNVGKSS++NALT G+ RTS+ PG TQ +NFF +
Sbjct: 47 LPEEGPPEIAFAGRSNVGKSSLINALTATKGLARTSNTPGRTQELNFFTPDAEFEDGLPP 106
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
+ LVD+PGYGFA A ++ DAW +L+ Y+ R +LKRV +LID + GVK D E+ L+
Sbjct: 107 IALVDMPGYGFAKAPKDAVDAWTKLIFSYLRGRTTLKRVYVLIDARHGVKKNDEEVFDLL 166
Query: 129 ERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
+++ YQ+VLTK D + P + + + E + + ++ SS+ G G+ L+
Sbjct: 167 DKAAVSYQLVLTKADKIKPPALVKLQAETLEKIAKRAAAFPFIVSTSSEKGHGVDDLK 224
>gi|452752316|ref|ZP_21952059.1| GTP-binding protein EngB [alpha proteobacterium JLT2015]
gi|451960392|gb|EMD82805.1| GTP-binding protein EngB [alpha proteobacterium JLT2015]
Length = 230
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 2/181 (1%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--TKLCLVD 73
P +PEIAFAGRSNVGKSS+LNAL Q G+ RTS+ PG TQ +N F +G +L LVD
Sbjct: 49 LPEDGVPEIAFAGRSNVGKSSLLNALCAQHGLARTSNTPGRTQLLNLFPVGKPPELRLVD 108
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYGFA A ++V D W+ LV +Y+ R +L+RV LLID + G+K D +++++++ +
Sbjct: 109 MPGYGFAKAPKKVVDQWKRLVFDYLRGRPTLRRVMLLIDVRRGIKDVDLDVMAMLDEAAV 168
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
YQ+VLTK D V A + + + V+ S++ G+ LR + A
Sbjct: 169 TYQIVLTKGDKVKQTGAAWNVAEAGRQIARRPAAFPLVLATSAEKNEGLDELRVAMLDAA 228
Query: 194 R 194
R
Sbjct: 229 R 229
>gi|296283113|ref|ZP_06861111.1| ribosome biogenesis GTP-binding protein YsxC [Citromicrobium
bathyomarinum JL354]
Length = 218
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 115/190 (60%), Gaps = 2/190 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++EF +A P P +PEIA AGRSNVGKSS+LNALT + G+ R S PG TQ +N
Sbjct: 22 GRVEFLLSAPQLKFLPEPTVPEIALAGRSNVGKSSLLNALTMRKGIARASVTPGRTQELN 81
Query: 62 FFKLG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
F++G T+ LVD+PGYGFA A + V + W+ +V+ Y+ R L R +L+D++ G+K
Sbjct: 82 IFEVGQPTQFRLVDMPGYGFAKAPKSVVEKWQNVVRTYLRGRPVLARALVLVDSRHGLKD 141
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
D ++ +++ + Y++VLTK+D + +A ++ K + + + + S++ G
Sbjct: 142 TDRAMMKMLDEAAVGYRIVLTKSDKIKASALAETHDKVAAEAKKHPAAYPEIHLTSAEKG 201
Query: 180 AGIRSLRTVL 189
GI +LR +
Sbjct: 202 QGIAALRAAI 211
>gi|428170459|gb|EKX39384.1| hypothetical protein GUITHDRAFT_50932, partial [Guillardia theta
CCMP2712]
Length = 140
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
L F A A V SS P LPE+AF GRSNVGKSS++NALT R+SDKPG+TQ NF+
Sbjct: 1 LTFVAGATVMSSMPPMTLPEVAFCGRSNVGKSSIINALTLS-TTARSSDKPGMTQQFNFY 59
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L +L +VD+PGYGFA+A E+ W+ L+ +Y+ TR +KRV L+ID + GVK D +
Sbjct: 60 VLPRRLMMVDMPGYGFAFANEQKMAGWKVLIDQYIQTR-KMKRVFLIIDGRHGVKQNDKD 118
Query: 124 LISLMERSQTKYQVVLTKTDTV 145
+ ++ ++ +Q++LTK D V
Sbjct: 119 FMQRLDDARVSFQIILTKCDLV 140
>gi|404252905|ref|ZP_10956873.1| GTP-binding protein YsxC [Sphingomonas sp. PAMC 26621]
Length = 211
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P +PE+AFAGRSNVGKSS+LNALT + + RTS+ PG TQ +NFF +
Sbjct: 21 FLKSAPALEFLPNAVVPEVAFAGRSNVGKSSLLNALTHRNSLARTSNTPGRTQELNFFDV 80
Query: 66 GTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
GT L LVD+PGYGFA A +++ W LV +++ R LKR +LID++ G+K D E
Sbjct: 81 GTPLTFRLVDMPGYGFAKAPKDMVRKWRFLVNDFLRGRDVLKRALVLIDSRHGIKDVDRE 140
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ +++++ Y++VLTK D + D+A + + +++ SS +G GI
Sbjct: 141 ILEMLDKAAVSYRMVLTKADKIKASDLAEVTEATAAEARKRPAAHPDILVTSSDTGLGIP 200
Query: 184 SLRTVL 189
LR +
Sbjct: 201 ELRAAV 206
>gi|157825273|ref|YP_001492993.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia akari str.
Hartford]
gi|166225973|sp|A8GM60.1|ENGB_RICAH RecName: Full=Probable GTP-binding protein EngB
gi|157799231|gb|ABV74485.1| GTPase EngB [Rickettsia akari str. Hartford]
Length = 212
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+++F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INF
Sbjct: 23 QVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINF 82
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F L KL +VDLPGYGFA+ VK+ WE L+ Y+ +L+ V LLID++ G+K D
Sbjct: 83 FNLADKLIIVDLPGYGFAHVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRGIKENDQ 142
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++ L+ ++ ++Q++ TK+D V ID +++ L N VM VSS+S G
Sbjct: 143 KVAELLLANKREFQIIFTKSDKV--IDCKNLNNEVQNFLATLNYSCN-VMYVSSRSKEGA 199
Query: 183 RSLRTVLSK 191
R+L+ L+K
Sbjct: 200 RALKASLAK 208
>gi|320353916|ref|YP_004195255.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus
propionicus DSM 2032]
gi|320122418|gb|ADW17964.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus
propionicus DSM 2032]
Length = 209
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 7/194 (3%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K++F +A PAP P+IAFAGRSNVGKSS+LN L + +V+TS KPG TQ++N+
Sbjct: 6 KVQFLLSAHAIGQLPAPVYPDIAFAGRSNVGKSSLLNRLVDRSNLVKTSSKPGKTQSLNY 65
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + L LVDLPGYG+A ++ + +W+ L+ EYV+TR +L V ++ID + +K D
Sbjct: 66 FLVEESLYLVDLPGYGYAQVSQQTRQSWQGLITEYVTTRSTLACVVVIIDLRHELKQLDR 125
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEE--SLKANNSLVQPVMMVSSKSGA 180
EL+ + T Y V TK D + + A ++ +L A++ ++ SS +G
Sbjct: 126 ELVDWLRYLDTPYLPVYTKADKLSRNQQMKNAAALDAGLTLTADDRII-----FSSSTGQ 180
Query: 181 GIRSLRTVLSKIAR 194
G+ SLR+ LS AR
Sbjct: 181 GLDSLRSRLSGFAR 194
>gi|222147368|ref|YP_002548325.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium vitis
S4]
gi|254783181|sp|B9JZK9.1|ENGB_AGRVS RecName: Full=Probable GTP-binding protein EngB
gi|221734358|gb|ACM35321.1| GTP-binding protein [Agrobacterium vitis S4]
Length = 219
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 116/187 (62%), Gaps = 10/187 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S F P+ P EIAFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 25 SMKFLPPEGPLEIAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPEGYSGE 84
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYG+A A ++ DAW +LV +Y+ R +LKRV LLID++ G+K D
Sbjct: 85 GDDLPPMALVDMPGYGYAKAPKDHVDAWTKLVFDYLRGRATLKRVYLLIDSRHGIKANDE 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQ+VLTKTD + V R + E ++ + V+ SS+ G+
Sbjct: 145 DVLTLLDKAAMSYQIVLTKTDKIKEAGVPRLIEETLEKIRKRPAAYPFVLSTSSEKDKGL 204
Query: 183 RSLRTVL 189
+ LR +
Sbjct: 205 KELRAAI 211
>gi|347526420|ref|YP_004833167.1| GTP-binding protein EngB [Sphingobium sp. SYK-6]
gi|345135101|dbj|BAK64710.1| putative GTP-binding protein EngB [Sphingobium sp. SYK-6]
Length = 213
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P D+PE+AFAGRSNVGKSS++NALT + + RTS+ PG TQ +NFF
Sbjct: 21 IAFLKSAPSLKFLPDADVPEVAFAGRSNVGKSSLINALTGRNALARTSNTPGRTQELNFF 80
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G+ L LVD+PGYG+A A ++V W LV +Y+ R LKR +LID++ G+K D
Sbjct: 81 DVGSPLRFRLVDMPGYGYAKAPKDVVKQWRFLVNDYLRGRPVLKRTHVLIDSRHGLKDVD 140
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
L+ +++ + Y+VVLTK D V D+A + +++ + ++ SS+ G G
Sbjct: 141 ETLLDMLDEAAVSYRVVLTKADKVKASDLAAVIERTAAAMRKRPAAHPQIIATSSEKGMG 200
Query: 182 IRSLRTVL 189
+ LR +
Sbjct: 201 MAELRAAV 208
>gi|384494383|gb|EIE84874.1| hypothetical protein RO3G_09584 [Rhizopus delemar RA 99-880]
Length = 300
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 108/183 (59%), Gaps = 22/183 (12%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
L FFA AKV +S P L EIAF GRSNVGKSS+LN+L + +VRTSDKPGLTQ +NFF
Sbjct: 105 LSFFAGAKVHTSIPPESLEEIAFVGRSNVGKSSLLNSLA-ETTIVRTSDKPGLTQQLNFF 163
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+G +VD+PGYGFA+A E + W ELV E T +E
Sbjct: 164 NVGKLFHMVDMPGYGFAFADEAERAKWRELVLEQSRT-------------------EGNE 204
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+++R K+Q+VLTK D + D+A+R +E +K + VQ V+ VSSK+ +GI
Sbjct: 205 SNDIVKR--VKFQIVLTKCDLLVLPDLAKRITVVENDIKQFRNAVQAVIAVSSKTSSGIN 262
Query: 184 SLR 186
LR
Sbjct: 263 QLR 265
>gi|384214936|ref|YP_005606100.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
gi|354953833|dbj|BAL06512.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
Length = 217
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ ++ P D EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 QFIWASPSIATLPPMDGLEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ K L LVD+PGYG+A A + +W EL+ +++ R SL RV +LID + G+K D
Sbjct: 82 VPGKKDLRLVDMPGYGYAKAPKTQVASWTELIHKFLLGRASLARVYVLIDARHGLKEVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQ+VLTK D V ++ R + E +L + + V+ SS+S G+
Sbjct: 142 EILGTLDRSAVSYQIVLTKADQVKASELQSRIAETEAALAKHPAAFPNVLATSSRSSTGM 201
Query: 183 RSLRTVLSKI 192
LR ++K+
Sbjct: 202 AELRAAMAKL 211
>gi|421596947|ref|ZP_16040658.1| GTP-binding protein YsxC [Bradyrhizobium sp. CCGE-LA001]
gi|404270943|gb|EJZ34912.1| GTP-binding protein YsxC [Bradyrhizobium sp. CCGE-LA001]
Length = 217
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ ++ P EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 QFIWASPSIATLPPMAGLEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ K L LVD+PGYG+A A + +W EL+ +++ R SL RV +LID + G+K D
Sbjct: 82 VPGKGDLRLVDMPGYGYAKAPKSQVASWTELIHKFLLGRASLARVYVLIDARHGIKEVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQ+VLTK D V ++ R + E +L + + V+ SS+S G+
Sbjct: 142 EVLKTLDRSAVSYQIVLTKADQVKAAELQARIAETEAALAKHPAAFPNVLATSSRSSTGM 201
Query: 183 RSLRTVLSKI 192
SLR ++K+
Sbjct: 202 ESLRAAMAKL 211
>gi|384262220|ref|YP_005417407.1| GTP-binding protein engB [Rhodospirillum photometricum DSM 122]
gi|378403321|emb|CCG08437.1| Probable GTP-binding protein engB [Rhodospirillum photometricum DSM
122]
Length = 320
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG------TKL 69
PA L E+AFAGRSNVGKSS++NALT + + R S+ PG TQ +NFF+LG L
Sbjct: 134 LPAHPLVEVAFAGRSNVGKSSLVNALTGRKTLARASNTPGRTQEVNFFRLGPPHSDEAAL 193
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYGFA A + + W LV Y+ R +L+RVCLLID + G+K D E++ +++
Sbjct: 194 MLVDLPGYGFARAPQAQVERWTRLVMAYLRGRSALRRVCLLIDARHGLKANDLEVMGMLD 253
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ YQVVLTK D + P + ++ + + V++ SS++GAGI
Sbjct: 254 SAAVNYQVVLTKADKLGPTVARATHATVAAAVARHVAAHPDVLLTSSETGAGI 306
>gi|83854935|ref|ZP_00948465.1| GTP-binding protein [Sulfitobacter sp. NAS-14.1]
gi|83941458|ref|ZP_00953920.1| GTP-binding protein [Sulfitobacter sp. EE-36]
gi|83842778|gb|EAP81945.1| GTP-binding protein [Sulfitobacter sp. NAS-14.1]
gi|83847278|gb|EAP85153.1| GTP-binding protein [Sulfitobacter sp. EE-36]
Length = 216
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 110/179 (61%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
P D E+ FAGRSNVGKS+++NALT + R S+ PG TQ IN+F LVD
Sbjct: 37 DGLPPADRMEVCFAGRSNVGKSTLINALTGTKALARASNTPGRTQEINYFTAADDHYLVD 96
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
LPGYG+A A V + W+ L+K+Y+S R +L+R +LID + GVK D E++SL++ S
Sbjct: 97 LPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVDDEIMSLLDSSAV 156
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
+Q VLTK D V ++ + Q+ +L + + +++ SS+ G GI +LR +++ +
Sbjct: 157 TFQCVLTKADKVKEVERQKVLDQVRGALAKHPAAYPEIVVTSSEKGWGIPTLRAIIATL 215
>gi|374329448|ref|YP_005079632.1| GTP-binding protein EngB [Pseudovibrio sp. FO-BEG1]
gi|359342236|gb|AEV35610.1| GTP-binding protein EngB [Pseudovibrio sp. FO-BEG1]
Length = 216
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 121/198 (61%), Gaps = 11/198 (5%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + K P D EIAFAGRSNVGKSS++N LT + + RTS+ PG TQ +NFF
Sbjct: 24 EFITSVKEMHQLPVLDGIEIAFAGRSNVGKSSLINKLTGKKALARTSNTPGRTQMLNFF- 82
Query: 65 LGTK---LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
GT+ L +VD+PGYG+A A + + DAW L+ +Y+ R +L+RV LID++ G+K D
Sbjct: 83 -GTEHSMLKIVDMPGYGYAEAPKGMVDAWTSLIFDYLRGRSTLRRVFSLIDSRHGIKKND 141
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK--ANNSLVQP-VMMVSSKS 178
+ +++++++ YQVVLTK D + P + R EE+LK A P V+ SS+
Sbjct: 142 LDAMAILDKAAVPYQVVLTKADKLKPGQLQRMK---EETLKVLAKRPAAHPEVIATSSEK 198
Query: 179 GAGIRSLRTVLSKIARFA 196
G G+ LR ++++ +
Sbjct: 199 GLGMDDLRAEIAQLVSYG 216
>gi|409399572|ref|ZP_11249846.1| GTP-binding protein YsxC [Acidocella sp. MX-AZ02]
gi|409131290|gb|EKN01001.1| GTP-binding protein YsxC [Acidocella sp. MX-AZ02]
Length = 233
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 120/190 (63%), Gaps = 3/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EFF AA+ P P EIA AGRSNVGKSS++NA+T + + R S +PG T+ +NFF+
Sbjct: 43 EFFYAAQALDHLPEPRGNEIALAGRSNVGKSSLINAITGRKALARVSHQPGRTRQLNFFE 102
Query: 65 L-GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ LVD+PGYG+A A +E+K W+ L+ +Y+ R +L+RV LL+D + +K D
Sbjct: 103 CQAGPVVLVDMPGYGYAEAPKEIKRDWQGLMLDYLRGRPNLRRVFLLLDARVEIKVSDET 162
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA-GI 182
++ L++++ +Q+VLTK D+V P + R+ ++ +L A + P ++ +S +G+ GI
Sbjct: 163 VMELLDQAAVPFQIVLTKADSVKPAALKRKQDEV-RALTAQHPAALPQILTTSSAGSIGI 221
Query: 183 RSLRTVLSKI 192
LR +++
Sbjct: 222 EELRAAIAEF 231
>gi|265992578|ref|ZP_06105135.1| GTPase EngB [Brucella melitensis bv. 3 str. Ether]
gi|262763448|gb|EEZ09480.1| GTPase EngB [Brucella melitensis bv. 3 str. Ether]
Length = 241
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F K
Sbjct: 48 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGK 107
Query: 65 LGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 108 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 167
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 168 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 227
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 228 DDLRAAIA 235
>gi|254501660|ref|ZP_05113811.1| small GTP-binding protein domain, putative [Labrenzia alexandrii
DFL-11]
gi|222437731|gb|EEE44410.1| small GTP-binding protein domain, putative [Labrenzia alexandrii
DFL-11]
Length = 215
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 118/193 (61%), Gaps = 7/193 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF- 63
+F + ++ P EIAFAGRSNVGKSS++NALT + G+ RTS PG TQ +NFF
Sbjct: 24 DFLTSVTDMANLPPAAGTEIAFAGRSNVGKSSLINALTGRKGLARTSSTPGRTQMLNFFV 83
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
T L +VD+PGYG+A A +E+ +AW LV Y+ R +L+RV LLID++ G+K D E
Sbjct: 84 APETPLTIVDMPGYGYAQAPKELVEAWTNLVFSYLRGRPNLRRVILLIDSRHGIKKNDLE 143
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLV--QP-VMMVSSKSGA 180
+ L++++ YQVVLTK D + P + R I+E+ A+ V P ++ SS+
Sbjct: 144 AMELLDKAAVVYQVVLTKADKIKPPALVR---LIDETKAASAKRVAAHPEIIATSSEKNR 200
Query: 181 GIRSLRTVLSKIA 193
G+ LR L +A
Sbjct: 201 GVDELRAELCNLA 213
>gi|403530822|ref|YP_006665351.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella quintana
RM-11]
gi|403232893|gb|AFR26636.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella quintana
RM-11]
Length = 215
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 116/188 (61%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLGT- 67
P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGEPGNL 86
Query: 68 -KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW L+ Y+ R +LKRV +LID++ G+K D +++
Sbjct: 87 PPIALVDMPGYGFAEAPKNLVDAWTHLIFSYLRGRTTLKRVYVLIDSRHGIKKNDGDVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D ++A+ M + L + + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKTKSNELAKLIMITKTKLLKHPAAYPELLVTSSEKALGLEELR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQAIA 214
>gi|315498840|ref|YP_004087644.1| ribosome biogenesis gtp-binding protein ysxc [Asticcacaulis
excentricus CB 48]
gi|315416852|gb|ADU13493.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis
excentricus CB 48]
Length = 231
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
AAK+ PA DLPE+ FAGRSNVGKSS++NAL Q + R S++PG T+ +NFF L
Sbjct: 41 MMGAAKIEQ-LPAADLPEVTFAGRSNVGKSSLINALVGQNHLARASNEPGRTREVNFFVL 99
Query: 66 GTKLCLVDLPGYGFAYA-KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
KL LVDLPGYG+A A K EVK ++ L ++Y+ R +LKR LLID + G+K D+E
Sbjct: 100 DEKLRLVDLPGYGWAKASKAEVKK-FQNLGRDYLRGRPNLKRAYLLIDARHGLKAVDNEP 158
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ ++ + YQ+VLTK D + P ++ + + ++ + V+ SS+ G GI
Sbjct: 159 MDALDVAAVSYQIVLTKADKIKPHELKAVIEKTQAQIRKRPAAHPVVLATSSEKGHGIPE 218
Query: 185 LR 186
LR
Sbjct: 219 LR 220
>gi|365885223|ref|ZP_09424234.1| putative GTP-binding protein engB [Bradyrhizobium sp. ORS 375]
gi|365286169|emb|CCD96765.1| putative GTP-binding protein engB [Bradyrhizobium sp. ORS 375]
Length = 220
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK-- 64
A+ ++S P EIAFAGRSNVGKSS++NALT Q + RTS PG TQ + FF+
Sbjct: 27 HASPSIASLPPMSGQIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELIFFEGP 86
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVD+PGYG+A A + +W EL+ +++ R SL RV +LID + G+K D ++
Sbjct: 87 ANAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLLGRSSLARVYVLIDARHGLKEVDQDI 146
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ +++S YQ+VLTK D + ++A R + E +L + + V+ SS+SG G+
Sbjct: 147 LKTLDKSAVSYQLVLTKADQIKSAELASRITETEAALARHPAAFPQVLATSSRSGTGMPE 206
Query: 185 LRTVLSKI 192
LR ++++
Sbjct: 207 LRAAMARL 214
>gi|452824341|gb|EME31344.1| GTP-binding protein [Galdieria sulphuraria]
Length = 319
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 118/195 (60%), Gaps = 6/195 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNAL---TRQWGVVRTSDKPGLTQTIN 61
E + A+V FP LPE+A GRSNVGKS ++N+L T+ + T D PG T+ +
Sbjct: 96 ELYKRARVPEEFPEALLPEVALIGRSNVGKSCLINSLVGGTKSRYLAETKDFPGTTRELG 155
Query: 62 FFKLGTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
F+ L + L +VDLPGYGFA A+E+ + W+E VKEY+ R +LKR+ +L+D + G+
Sbjct: 156 FYVLRSGFLSVVDLPGYGFAIAEEQERKQWQETVKEYLQQRKTLKRLLILLDARHGIMKA 215
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKAN--NSLVQPVMMVSSKS 178
D +++ +R + KYQ VL K D V ++AR+ + E + + +++ +MM SS +
Sbjct: 216 DRDMLQFFQRCKVKYQFVLNKCDLVKDDELARKVYMVREEISSGVYKRVLKNIMMTSSHT 275
Query: 179 GAGIRSLRTVLSKIA 193
AG +L+ L+ +A
Sbjct: 276 RAGAFTLQAELTGLA 290
>gi|254473683|ref|ZP_05087078.1| GTP-binding protein [Pseudovibrio sp. JE062]
gi|211957069|gb|EEA92274.1| GTP-binding protein [Pseudovibrio sp. JE062]
Length = 216
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 7/196 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + K P D EIAFAGRSNVGKSS++N LT + + RTS+ PG TQ +NFF
Sbjct: 24 EFITSVKEMHQLPVLDGIEIAFAGRSNVGKSSLINKLTGKKALARTSNTPGRTQMLNFFG 83
Query: 65 L-GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ L +VD+PGYG+A A + + DAW L+ +Y+ R +L+RV LID++ G+K D +
Sbjct: 84 AEHSMLKIVDMPGYGYAEAPKGMVDAWTSLIFDYLRGRSTLRRVFSLIDSRHGIKKNDLD 143
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK--ANNSLVQP-VMMVSSKSGA 180
+++++++ YQVVLTK D + P + R EE+LK A P V+ SS+ G
Sbjct: 144 AMAILDKAAVPYQVVLTKADKLKPGQLQRMK---EETLKVLAKRPAAHPEVIATSSEKGL 200
Query: 181 GIRSLRTVLSKIARFA 196
G+ LR ++++ +
Sbjct: 201 GMDDLRAEIAQLVSYG 216
>gi|153008691|ref|YP_001369906.1| ribosome biogenesis GTP-binding protein YsxC [Ochrobactrum anthropi
ATCC 49188]
gi|404318490|ref|ZP_10966423.1| GTP-binding protein YsxC [Ochrobactrum anthropi CTS-325]
gi|151560579|gb|ABS14077.1| GTP-binding protein HSR1-related [Ochrobactrum anthropi ATCC 49188]
Length = 241
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F
Sbjct: 48 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVNKKGLARTSNTPGRTQELNYFVPDGYSGE 107
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 108 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 167
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 168 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGEGL 227
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 228 DELRAAIA 235
>gi|121602307|ref|YP_989324.1| GTPase EngB [Bartonella bacilliformis KC583]
gi|421761126|ref|ZP_16197931.1| GTP-binding protein YsxC [Bartonella bacilliformis INS]
gi|166225944|sp|A1UTM1.1|ENGB_BARBK RecName: Full=Probable GTP-binding protein EngB
gi|120614484|gb|ABM45085.1| GTP-binding protein [Bartonella bacilliformis KC583]
gi|411173536|gb|EKS43580.1| GTP-binding protein YsxC [Bartonella bacilliformis INS]
Length = 215
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL----GTK--- 68
P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F G+K
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGSKEDF 86
Query: 69 --LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW LV Y+ R +LKRV +LID++ G+K D E++
Sbjct: 87 PPMALVDMPGYGFAQAPKNLVDAWTHLVFNYLRGRTTLKRVYILIDSRHGIKKNDEEVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ++LTK+D + + + SL + ++ S++ G+ LR
Sbjct: 147 LLDKAAVSYQIILTKSDKIKSNMLENLMTTTQMSLLKRPAAYPELLTTSAEKALGLEELR 206
Query: 187 TVL 189
T +
Sbjct: 207 TAI 209
>gi|114797282|ref|YP_759145.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomonas neptunium
ATCC 15444]
gi|119369205|sp|Q0C548.1|ENGB_HYPNA RecName: Full=Probable GTP-binding protein EngB
gi|114737456|gb|ABI75581.1| GTP-binding protein [Hyphomonas neptunium ATCC 15444]
Length = 220
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
K EF S P D E+ FAGRSNVGKSS++NALT + + R+S +PG T+ +N
Sbjct: 23 GKAEFVMGVVSLSGLPPADRSEVCFAGRSNVGKSSLINALTGRAKLARSSAEPGRTRELN 82
Query: 62 FFKLGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG-VK 118
+F +G KL LVDLPG+G+A + AW +L+K Y+ R SL+RV LL+D + G +
Sbjct: 83 YFDIGDEGKLYLVDLPGFGYAKVSKTQTAAWTKLIKSYLRGRPSLRRVFLLVDARRGDLM 142
Query: 119 PRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKS 178
D E++ LM+ + YQVVLTK D V +V + ++I + LK + V M S++
Sbjct: 143 DTDEEVMDLMDGAAVTYQVVLTKVDKVPKGEVEKIVVKIADKLKKRGAAHPVVRMTSAEK 202
Query: 179 GAGIRSLRTVLSKIA 193
G GI LR ++ +A
Sbjct: 203 GFGIPELRAEIAALA 217
>gi|118589751|ref|ZP_01547156.1| GTP-binding protein [Stappia aggregata IAM 12614]
gi|118437837|gb|EAV44473.1| GTP-binding protein [Labrenzia aggregata IAM 12614]
Length = 215
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF- 63
+F + ++ P EIAFAGRSNVGKSS++NALT + + RTS PG TQ +NFF
Sbjct: 24 DFLTSVTDMANLPEAAGAEIAFAGRSNVGKSSLINALTGRKDLARTSATPGRTQMLNFFI 83
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
T L +VD+PGYG+A A +E+ +AW +LV Y+ R +L+RV LLID++ G+K D E
Sbjct: 84 APETPLTIVDMPGYGYAQAPKELVEAWTKLVFSYLRGRPNLRRVILLIDSRHGIKKNDLE 143
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+ L++++ YQVVLTK+D + P + R + + L+ + ++ SS+ G+
Sbjct: 144 AMELLDKAAVVYQVVLTKSDKIKPPQLVRLIEETQAILRKRVAAHPEILATSSEKNRGVD 203
Query: 184 SLRTVLSKIA 193
LR L +A
Sbjct: 204 ELRAELFLLA 213
>gi|49475955|ref|YP_033996.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella henselae
str. Houston-1]
gi|81647688|sp|Q6G2G5.1|ENGB_BARHE RecName: Full=Probable GTP-binding protein EngB
gi|49238763|emb|CAF28024.1| GTP-binding protein cgpa [Bartonella henselae str. Houston-1]
Length = 215
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--------- 66
P PEIAFAGRSNVGKSS++NAL RQ + RTS+ PG TQ +N+F
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVRQKSLARTSNMPGRTQELNYFVPDGFSGRPEDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW +L+ Y+ R +LKRV +LID++ G+K D E++
Sbjct: 87 PPIALVDMPGYGFAKAPKNLVDAWTDLIYSYLRGRTTLKRVYVLIDSRHGIKKNDAEILE 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + +R + + L + ++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKSSVLEQRIITTKTKLLKRPAAYPEILATSSEKAFGLEELR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQTIA 214
>gi|89053125|ref|YP_508576.1| ribosome biogenesis GTP-binding protein YsxC [Jannaschia sp. CCS1]
gi|119369206|sp|Q28UR1.1|ENGB_JANSC RecName: Full=Probable GTP-binding protein EngB
gi|88862674|gb|ABD53551.1| GTP-binding protein [Jannaschia sp. CCS1]
Length = 218
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F P D E+ FAGRSNVGKS+++NALT + G+ R S+ PG TQ IN+F
Sbjct: 29 DFLKGVVAMDGLPPADRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEINYFT 88
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVDLPGYG+A A V W+ L+K Y+ R +L+R +LID + GVK D E+
Sbjct: 89 LLDSHYLVDLPGYGYAEAPLHVVQQWQALLKSYLQGRATLRRAFVLIDARHGVKAVDEEI 148
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++ + +Q VLTK+D V D + ++L + + +++ SS+ G GI +
Sbjct: 149 MKLLDIAAVPFQTVLTKSDKVKGRDRDASLARTRKALANHPAAYPEIILTSSEKGDGIPT 208
Query: 185 LRTVLSKI 192
LR ++ I
Sbjct: 209 LRATIATI 216
>gi|423712379|ref|ZP_17686681.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella washoensis
Sb944nv]
gi|395412253|gb|EJF78762.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella washoensis
Sb944nv]
Length = 215
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 117/188 (62%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRTQELNYFVPDGYSGQPGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW L+ Y+ R +LKRV +LID++ G+K D ++++
Sbjct: 87 PPVALVDMPGYGFAEAPKNLVDAWTRLIFSYLRGRTTLKRVYVLIDSRHGIKKNDADVLN 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D V ++A+ M + L + + +++ SS+ G+ +R
Sbjct: 147 LLDKAAVSYQIVLTKSDKVKSNELAKLVMATQTKLLKHPAAYPELLVTSSEKALGLEEMR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQAIA 214
>gi|85709447|ref|ZP_01040512.1| GTP-binding protein [Erythrobacter sp. NAP1]
gi|85688157|gb|EAQ28161.1| GTP-binding protein [Erythrobacter sp. NAP1]
Length = 229
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+++F +A P P PE+AF GRSNVGKSS+LNALT + + R S PG TQ +N
Sbjct: 23 GRVDFLLSAPQLKFLPDPICPEVAFCGRSNVGKSSLLNALTGRKAIARASVTPGRTQELN 82
Query: 62 FFKLGTK------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKW 115
FF +G + LVD+PGYGFA A +V + W+ LVK Y+ R L R +L+D++
Sbjct: 83 FFDVGGEPGGKPLFRLVDMPGYGFAKAPVKVVERWKNLVKSYLRGRPVLARNLVLVDSRH 142
Query: 116 GVKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVS 175
G+K D E++ +++ + Y++VLTKTD + ++ R A ++ + + + + + + S
Sbjct: 143 GLKDVDREMMKMLDEAAVGYRIVLTKTDKIKASELERVANKVADEARKHVAAYPELHLTS 202
Query: 176 SKSGAGIRSLRTVL 189
S+ G GI +LR +
Sbjct: 203 SEKGMGIEALRAAV 216
>gi|395781043|ref|ZP_10461485.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella washoensis
085-0475]
gi|395416547|gb|EJF82918.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella washoensis
085-0475]
Length = 215
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 117/188 (62%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRTQELNYFVPDGYSGQPGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW L+ Y+ R +LKRV +LID++ G+K D ++++
Sbjct: 87 PPVALVDMPGYGFAEAPKNLVDAWTRLIFSYLRGRTTLKRVYVLIDSRHGIKKNDADVLN 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D V ++A+ M + L + + +++ SS+ G+ +R
Sbjct: 147 LLDKAAVSYQIVLTKSDKVKSNELAKLVMATQTKLLKHPAAYPELLVTSSERALGLEEMR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQAIA 214
>gi|260567730|ref|ZP_05838199.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
40]
gi|376277466|ref|YP_005153527.1| ATP/GTP-binding site-containing protein A [Brucella canis HSK
A52141]
gi|260154395|gb|EEW89476.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
40]
gi|363405840|gb|AEW16134.1| ATP/GTP-binding site-containing protein A [Brucella canis HSK
A52141]
Length = 241
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F
Sbjct: 48 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSSE 107
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 108 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 167
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 168 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 227
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 228 DDLRAAIA 235
>gi|161621072|ref|YP_001594958.1| ribosome biogenesis GTP-binding protein YsxC [Brucella canis ATCC
23365]
gi|161337883|gb|ABX64187.1| GTP-binding conserved hypothetical protein [Brucella canis ATCC
23365]
Length = 267
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F +
Sbjct: 74 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSSE 133
Query: 65 LGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 134 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 193
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 194 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 253
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 254 DDLRAAIA 261
>gi|296444655|ref|ZP_06886619.1| ribosome biogenesis GTP-binding protein YsxC [Methylosinus
trichosporium OB3b]
gi|296257923|gb|EFH04986.1| ribosome biogenesis GTP-binding protein YsxC [Methylosinus
trichosporium OB3b]
Length = 219
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 117/191 (61%), Gaps = 6/191 (3%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
FA+AK SS P PEIAFAGRSNVGKSS+LNALT + + R S+ PG TQ +NFF +G
Sbjct: 24 FASAK-SSDLPPIGPPEIAFAGRSNVGKSSLLNALTGRKTLARVSNTPGRTQQLNFFAVG 82
Query: 67 TK-----LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+ L LVD+PGYG+A +E +W L+++++ R SL RV +LID++ G+K D
Sbjct: 83 AEPGAEPLRLVDMPGYGYAAVGKEKVASWTRLMEDFLRGRASLARVFVLIDSRRGIKEMD 142
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ L+++S YQ+VLTK D + + A E +L + V SS+ G G
Sbjct: 143 EEMLDLLDKSAVSYQIVLTKRDELKLAERAAALAAAEAALAKRPAAFPQVAATSSRDGEG 202
Query: 182 IRSLRTVLSKI 192
I LR ++++
Sbjct: 203 IAELRAGIARL 213
>gi|17988618|ref|NP_541251.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
bv. 1 str. 16M]
gi|189023103|ref|YP_001932844.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus S19]
gi|260545088|ref|ZP_05820909.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC
8038]
gi|260565069|ref|ZP_05835554.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
1 str. 16M]
gi|260756232|ref|ZP_05868580.1| GTPase EngB [Brucella abortus bv. 6 str. 870]
gi|260760399|ref|ZP_05872747.1| GTPase EngB [Brucella abortus bv. 4 str. 292]
gi|260763639|ref|ZP_05875971.1| GTPase EngB [Brucella abortus bv. 2 str. 86/8/59]
gi|260882056|ref|ZP_05893670.1| GTPase EngB [Brucella abortus bv. 9 str. C68]
gi|261216466|ref|ZP_05930747.1| GTPase EngB [Brucella abortus bv. 3 str. Tulya]
gi|261220834|ref|ZP_05935115.1| GTPase EngB [Brucella ceti B1/94]
gi|261312923|ref|ZP_05952120.1| GTPase EngB [Brucella pinnipedialis M163/99/10]
gi|261318318|ref|ZP_05957515.1| GTPase EngB [Brucella pinnipedialis B2/94]
gi|261322753|ref|ZP_05961950.1| GTPase EngB [Brucella neotomae 5K33]
gi|261750714|ref|ZP_05994423.1| GTPase EngB [Brucella suis bv. 5 str. 513]
gi|261753970|ref|ZP_05997679.1| GTPase EngB [Brucella suis bv. 3 str. 686]
gi|261757212|ref|ZP_06000921.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265985154|ref|ZP_06097889.1| GTPase EngB [Brucella sp. 83/13]
gi|265986116|ref|ZP_06098673.1| GTPase EngB [Brucella pinnipedialis M292/94/1]
gi|265990315|ref|ZP_06102872.1| GTPase EngB [Brucella melitensis bv. 1 str. Rev.1]
gi|265995810|ref|ZP_06108367.1| GTPase EngB [Brucella ceti M490/95/1]
gi|306839546|ref|ZP_07472353.1| GTP-binding conserved hypothetical protein [Brucella sp. NF 2653]
gi|306840614|ref|ZP_07473367.1| GTP-binding conserved hypothetical protein [Brucella sp. BO2]
gi|306846226|ref|ZP_07478788.1| GTP-binding conserved hypothetical protein [Brucella inopinata BO1]
gi|376271522|ref|YP_005114567.1| hypothetical protein BAA13334_II01752 [Brucella abortus A13334]
gi|54037055|sp|P64067.1|ENGB_BRUSU RecName: Full=Probable GTP-binding protein EngB
gi|54040978|sp|P64066.1|ENGB_BRUME RecName: Full=Probable GTP-binding protein EngB
gi|119368793|sp|Q2YJR1.2|ENGB_BRUA2 RecName: Full=Probable GTP-binding protein EngB
gi|119368794|sp|Q576T9.2|ENGB_BRUAB RecName: Full=Probable GTP-binding protein EngB
gi|17984421|gb|AAL53515.1| gtp-binding protein cgpa [Brucella melitensis bv. 1 str. 16M]
gi|189021677|gb|ACD74398.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
gi|260098359|gb|EEW82233.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC
8038]
gi|260152712|gb|EEW87805.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
1 str. 16M]
gi|260670717|gb|EEX57657.1| GTPase EngB [Brucella abortus bv. 4 str. 292]
gi|260674060|gb|EEX60881.1| GTPase EngB [Brucella abortus bv. 2 str. 86/8/59]
gi|260676340|gb|EEX63161.1| GTPase EngB [Brucella abortus bv. 6 str. 870]
gi|260871584|gb|EEX78653.1| GTPase EngB [Brucella abortus bv. 9 str. C68]
gi|260918073|gb|EEX84934.1| GTPase EngB [Brucella abortus bv. 3 str. Tulya]
gi|260919418|gb|EEX86071.1| GTPase EngB [Brucella ceti B1/94]
gi|261297541|gb|EEY01038.1| GTPase EngB [Brucella pinnipedialis B2/94]
gi|261298733|gb|EEY02230.1| GTPase EngB [Brucella neotomae 5K33]
gi|261301949|gb|EEY05446.1| GTPase EngB [Brucella pinnipedialis M163/99/10]
gi|261737196|gb|EEY25192.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261740467|gb|EEY28393.1| GTPase EngB [Brucella suis bv. 5 str. 513]
gi|261743723|gb|EEY31649.1| GTPase EngB [Brucella suis bv. 3 str. 686]
gi|262550107|gb|EEZ06268.1| GTPase EngB [Brucella ceti M490/95/1]
gi|263000984|gb|EEZ13674.1| GTPase EngB [Brucella melitensis bv. 1 str. Rev.1]
gi|264658313|gb|EEZ28574.1| GTPase EngB [Brucella pinnipedialis M292/94/1]
gi|264663746|gb|EEZ34007.1| GTPase EngB [Brucella sp. 83/13]
gi|306273477|gb|EFM55338.1| GTP-binding conserved hypothetical protein [Brucella inopinata BO1]
gi|306289399|gb|EFM60633.1| GTP-binding conserved hypothetical protein [Brucella sp. BO2]
gi|306405378|gb|EFM61650.1| GTP-binding conserved hypothetical protein [Brucella sp. NF 2653]
gi|363402694|gb|AEW19663.1| GTP-binding conserved hypothetical protein [Brucella abortus
A13334]
Length = 241
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F
Sbjct: 48 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGE 107
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 108 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 167
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 168 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 227
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 228 DDLRAAIA 235
>gi|23500747|ref|NP_700187.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis 1330]
gi|62317853|ref|YP_223706.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. 9-941]
gi|83269832|ref|YP_419123.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
biovar Abortus 2308]
gi|148558302|ref|YP_001257935.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ovis ATCC
25840]
gi|163845138|ref|YP_001622793.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis ATCC
23445]
gi|225629473|ref|ZP_03787506.1| GTP-binding conserved hypothetical protein [Brucella ceti str.
Cudo]
gi|237817393|ref|ZP_04596385.1| GTP-binding conserved hypothetical protein [Brucella abortus str.
2308 A]
gi|256015783|ref|YP_003105792.1| ribosome biogenesis GTP-binding protein YsxC [Brucella microti CCM
4915]
gi|297249211|ref|ZP_06932912.1| GTP-binding protein [Brucella abortus bv. 5 str. B3196]
gi|340792786|ref|YP_004758250.1| GTP-binding protein [Brucella pinnipedialis B2/94]
gi|376278969|ref|YP_005109002.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis VBI22]
gi|384223529|ref|YP_005614694.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis 1330]
gi|423168242|ref|ZP_17154944.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI435a]
gi|423172323|ref|ZP_17158997.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI474]
gi|423173946|ref|ZP_17160616.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI486]
gi|423175822|ref|ZP_17162488.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI488]
gi|423181752|ref|ZP_17168392.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI010]
gi|423184885|ref|ZP_17171521.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI016]
gi|423188038|ref|ZP_17174651.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI021]
gi|423190455|ref|ZP_17177064.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI259]
gi|23464401|gb|AAN34192.1| GTP-binding protein, putative [Brucella suis 1330]
gi|62198046|gb|AAX76345.1| hypothetical GTP-binding protein [Brucella abortus bv. 1 str.
9-941]
gi|82940106|emb|CAJ13153.1| ATP/GTP-binding site motif A (P-loop):GTP-binding domain [Brucella
melitensis biovar Abortus 2308]
gi|148369587|gb|ABQ62459.1| putative GTP-binding protein [Brucella ovis ATCC 25840]
gi|163675861|gb|ABY39971.1| GTP-binding conserved hypothetical protein [Brucella suis ATCC
23445]
gi|225615969|gb|EEH13018.1| GTP-binding conserved hypothetical protein [Brucella ceti str.
Cudo]
gi|237788206|gb|EEP62422.1| GTP-binding conserved hypothetical protein [Brucella abortus str.
2308 A]
gi|255998443|gb|ACU50130.1| GTP-binding protein [Brucella microti CCM 4915]
gi|297173080|gb|EFH32444.1| GTP-binding protein [Brucella abortus bv. 5 str. B3196]
gi|340561245|gb|AEK56482.1| GTP-binding protein [Brucella pinnipedialis B2/94]
gi|343384977|gb|AEM20468.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis 1330]
gi|358260407|gb|AEU08140.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis VBI22]
gi|374536745|gb|EHR08265.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI474]
gi|374538735|gb|EHR10242.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI435a]
gi|374539947|gb|EHR11449.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI486]
gi|374546342|gb|EHR17802.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI010]
gi|374547185|gb|EHR18644.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI016]
gi|374554218|gb|EHR25631.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI021]
gi|374556495|gb|EHR27900.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI259]
gi|374556622|gb|EHR28026.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv.
1 str. NI488]
Length = 267
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F +
Sbjct: 74 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGE 133
Query: 65 LGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 134 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 193
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 194 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 253
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 254 DDLRAAIA 261
>gi|218515056|ref|ZP_03511896.1| GTPase EngB [Rhizobium etli 8C-3]
Length = 217
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 118/194 (60%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDE 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQ+VLTKTD + V + + + ++ + V+ SS+ G G+
Sbjct: 141 DVLTLLDKAAVSYQLVLTKTDKITAPAVPKLLAETADKIRKRPAAYPAVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 201 DDLRQAIAQTVGIA 214
>gi|341614166|ref|ZP_08701035.1| GTP-binding protein YsxC [Citromicrobium sp. JLT1363]
Length = 216
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++EF +A P P +PE+A GRSNVGKSS+LNALT + G+ R S PG TQ +N
Sbjct: 20 GRVEFLLSAPQLKFLPDPTVPEVALCGRSNVGKSSLLNALTMRKGIARASVTPGRTQELN 79
Query: 62 FFKLG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
FF++G T+ LVD+PGYGFA A + V + W+ LV+ Y+ R L R +L+D++ G+K
Sbjct: 80 FFEVGEPTQFRLVDMPGYGFAKAPKSVVEKWQGLVRTYLRGRSVLTRTLVLVDSRHGLKD 139
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
D ++ +++ + Y++VLTK+D + + ++ K + + + + S++ G
Sbjct: 140 SDRAMMKMLDEAAVGYRIVLTKSDKIKASALEATYEKVAAEAKKHPAAYPEIHLTSAEKG 199
Query: 180 AGIRSLRTVL 189
GI +LR +
Sbjct: 200 QGIAALRAAV 209
>gi|115522672|ref|YP_779583.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris BisA53]
gi|123026147|sp|Q07TY1.1|ENGB_RHOP5 RecName: Full=Probable GTP-binding protein EngB
gi|115516619|gb|ABJ04603.1| GTP-binding protein [Rhodopseudomonas palustris BisA53]
Length = 216
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P E+AFAGRSNVGKSS++NALT + G+ RTS PG TQ + FF+
Sbjct: 22 QFIWASPSVETLPPMQGLEVAFAGRSNVGKSSLINALTGRNGLARTSHTPGRTQELIFFE 81
Query: 65 --LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
LVD+PGYG+A A + +W +L+ +++ R +L RV +LID + G+K D+
Sbjct: 82 GPADAGFRLVDMPGYGYAAAPKTKIASWTKLIHQFLQGRATLVRVYVLIDARHGIKDVDN 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E+++ +++S YQ+VLTK D V P ++A R E+L+ + + +++ SS++ +G+
Sbjct: 142 EVLTTLDKSAVSYQIVLTKADQVKPAELAERVAATTEALRKHPAAFPEIVVTSSRNASGM 201
Query: 183 RSLRTVLSKI 192
LR + K+
Sbjct: 202 PELRAAIIKL 211
>gi|398383128|ref|ZP_10541202.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Sphingobium sp.
AP49]
gi|397725295|gb|EJK85748.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Sphingobium sp.
AP49]
Length = 215
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P + E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF
Sbjct: 21 ISFLKSAPTLDYLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFF 80
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYG+A A +++ W+ LV +Y+ R +LKR +LID++ G+K D
Sbjct: 81 DVGDPLRFRLVDMPGYGYAKAPKDIVRKWKFLVNDYLRGRAALKRALVLIDSRHGIKDVD 140
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ +++ + Y++VLTK D + ++ + ++++ + ++ SS+ G G
Sbjct: 141 TDMLDMLDGAAVSYRIVLTKADKIKASELVTVTQRTADAIRKRPAAHPDIIATSSEKGMG 200
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 201 IPELRAAV 208
>gi|261217610|ref|ZP_05931891.1| GTPase EngB [Brucella ceti M13/05/1]
gi|261320487|ref|ZP_05959684.1| GTPase EngB [Brucella ceti M644/93/1]
gi|260922699|gb|EEX89267.1| GTPase EngB [Brucella ceti M13/05/1]
gi|261293177|gb|EEX96673.1| GTPase EngB [Brucella ceti M644/93/1]
Length = 241
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F
Sbjct: 48 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGE 107
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 108 NGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 167
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 168 EVLDLLDKAAVSYQIVLTKLDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 227
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 228 DDLRAAIA 235
>gi|298290370|ref|YP_003692309.1| ribosome biogenesis GTP-binding protein YsxC [Starkeya novella DSM
506]
gi|296926881|gb|ADH87690.1| ribosome biogenesis GTP-binding protein YsxC [Starkeya novella DSM
506]
Length = 233
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 112/187 (59%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +AA + P EIA AGRSNVGKSS++NALT + + RTS PG TQ + FF L
Sbjct: 38 FLSAAPTIPTMPPMRGIEIALAGRSNVGKSSLVNALTGRKALARTSVTPGRTQELIFFGL 97
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G +L LVD+PGYGFA A ++ DAW + Y+ R +L RV +LID++ G+KP D E++
Sbjct: 98 GPELTLVDMPGYGFAKAPKDKVDAWTATIHAYLRGRANLARVFVLIDSRHGLKPIDTEVL 157
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
++++ Y +VLTK D + ++A+R + +L + V SS+ G GI L
Sbjct: 158 DGLDKAAVSYAIVLTKADQLKKGELAQRVEATQAALLRRPAAFPIVFPTSSREGWGIPEL 217
Query: 186 RTVLSKI 192
R + ++
Sbjct: 218 RAAVVRL 224
>gi|190890107|ref|YP_001976649.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium etli CIAT
652]
gi|238692551|sp|B3Q039.1|ENGB_RHIE6 RecName: Full=Probable GTP-binding protein EngB
gi|190695386|gb|ACE89471.1| GTP-binding protein [Rhizobium etli CIAT 652]
Length = 217
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 119/194 (61%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDE 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQ+VLTKTD + V + + + ++ + V+ SS+ G G+
Sbjct: 141 DVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPAVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 201 DDLRQAIAQTVGIA 214
>gi|395789719|ref|ZP_10469229.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella taylorii
8TBB]
gi|395428557|gb|EJF94633.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella taylorii
8TBB]
Length = 215
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 113/183 (61%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F +LG
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRTQELNYFVPDGFSGQLGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW EL+ Y+ R +LKRV +LID++ G+K D +++
Sbjct: 87 PPIALVDMPGYGFAEAPKNLVDAWTELIFNYLRGRTTLKRVYVLIDSRHGIKKNDADVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + + + + L + + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKSNVLEKLIITTKTKLLKHPAAYPEILVTSSEKALGLEELR 206
Query: 187 TVL 189
+
Sbjct: 207 AAI 209
>gi|163868926|ref|YP_001610153.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella tribocorum
CIP 105476]
gi|189037171|sp|A9IXE1.1|ENGB_BART1 RecName: Full=Probable GTP-binding protein EngB
gi|161018600|emb|CAK02158.1| GTP-binding protein [Bartonella tribocorum CIP 105476]
Length = 214
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLGT- 67
P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFIPDGFSGQRGDL 86
Query: 68 -KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+VD+PGYGFA A + + DAW L+ Y+ R +LKRV LLID++ G+K D ++++
Sbjct: 87 PPFAVVDMPGYGFAAAPKNLVDAWTNLIFSYLRGRSTLKRVYLLIDSRHGIKNNDEDVLA 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + + M + L + + ++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKSNALEKLIMITQTKLLKHPAAYPEILATSSEKAYGLEELR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQTIA 214
>gi|381200553|ref|ZP_09907690.1| GTP-binding protein YsxC [Sphingobium yanoikuyae XLDN2-5]
Length = 215
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P + E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF
Sbjct: 21 ISFLKSAPTLDYLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFF 80
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYG+A A +++ W LV +Y+ R +LKR +LID++ G+K D
Sbjct: 81 DVGDPLRFRLVDMPGYGYAKAPKDLVKKWRFLVNDYLRGRAALKRALVLIDSRHGIKDVD 140
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ +++ + Y++VLTK+D + ++ + ++++ + ++ SS+ G G
Sbjct: 141 TDMLDMLDGAAVSYRIVLTKSDKIKASELVAVTQRTADAIRKRPAAHPEIIATSSEKGMG 200
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 201 IPELRAAV 208
>gi|383500952|ref|YP_005414311.1| GTP-binding protein YsxC [Rickettsia australis str. Cutlack]
gi|378931963|gb|AFC70468.1| GTP-binding protein YsxC [Rickettsia australis str. Cutlack]
Length = 212
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 114/192 (59%), Gaps = 3/192 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+++F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INF
Sbjct: 23 QVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINF 82
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F L KL +VDLPGYGFA VK+ WE L+ Y+ +L+ V LLID++ G+K D
Sbjct: 83 FNLADKLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRGIKENDK 142
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++ L+ ++ ++Q++ TK+D V +D +++ L N VM VSS+S G
Sbjct: 143 KVAELLLANKREFQIIFTKSDKV--MDCKNLNNEVQNFLATLNYSCN-VMYVSSRSKEGA 199
Query: 183 RSLRTVLSKIAR 194
R+L+ L+K +
Sbjct: 200 RALKASLAKCTK 211
>gi|427410088|ref|ZP_18900290.1| GTP-binding protein engB [Sphingobium yanoikuyae ATCC 51230]
gi|425712221|gb|EKU75236.1| GTP-binding protein engB [Sphingobium yanoikuyae ATCC 51230]
Length = 215
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P + E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF
Sbjct: 21 ISFLKSAPTLDYLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFF 80
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYG+A A +++ W LV +Y+ R +LKR +LID++ G+K D
Sbjct: 81 DVGDPLRFRLVDMPGYGYAKAPKDLVKKWRFLVNDYLRGRAALKRALVLIDSRHGIKDVD 140
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ +++ + Y++VLTK+D + ++ + ++++ + ++ SS+ G G
Sbjct: 141 TDMLDMLDGAAVSYRIVLTKSDKIKASELVAVTQRTADAIRKRPAAHPEIIATSSEKGMG 200
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 201 IPELRAAV 208
>gi|334346493|ref|YP_004555045.1| GTP-binding protein engB [Sphingobium chlorophenolicum L-1]
gi|334103115|gb|AEG50539.1| GTP-binding protein engB [Sphingobium chlorophenolicum L-1]
Length = 215
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 19 PDLP--EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLC--LVDL 74
PD+ E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF +G L LVD+
Sbjct: 34 PDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDVGDPLRFRLVDM 93
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A A +++ W LV +Y+ R LKR +LID++ G+K D +++ +++ +
Sbjct: 94 PGYGYAKAPKDMVRKWRFLVNDYLRGRAKLKRTLVLIDSRHGIKDVDTDILDMLDAAAVS 153
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
Y++VLTK D V +A + E+++ + ++ SS+ G G+ LR +
Sbjct: 154 YRIVLTKADKVKASHLAEVKQAVAEAIRKRPAAHPDIIATSSEKGMGLPELRAAV 208
>gi|91206092|ref|YP_538447.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia bellii
RML369-C]
gi|157826475|ref|YP_001495539.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia bellii OSU
85-389]
gi|119369249|sp|Q1RH06.1|ENGB_RICBR RecName: Full=Probable GTP-binding protein EngB
gi|166225974|sp|A8GUK6.1|ENGB_RICB8 RecName: Full=Probable GTP-binding protein EngB
gi|91069636|gb|ABE05358.1| Hypothetical GTP-binding protein [Rickettsia bellii RML369-C]
gi|157801779|gb|ABV78502.1| GTPase EngB [Rickettsia bellii OSU 85-389]
Length = 212
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A P LP+IAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMDIKQLPNFALPQIAFVGKSNVGKSSLINTICNNKKLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA +VKD WE L+ Y+ +LK V LLID++ G+K D ++
Sbjct: 83 LVDKLIIVDLPGYGFAQVPNQVKDQWEILINHYLRKSDNLKLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ +Q++ TK+D V R+ + +E ++ A + ++ VSS+S G R
Sbjct: 143 AELLLANKRDFQIIFTKSDKV----TDRKNLNLEAQNFLATLNYSCNLIYVSSRSKEGAR 198
Query: 184 SLRTVLSKIARFAK 197
L+T L+K + K
Sbjct: 199 ELKTSLAKCIKLEK 212
>gi|222084725|ref|YP_002543254.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium
radiobacter K84]
gi|398379664|ref|ZP_10537784.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
AP16]
gi|254783180|sp|B9J8E2.1|ENGB_AGRRK RecName: Full=Probable GTP-binding protein EngB
gi|221722173|gb|ACM25329.1| GTP-binding protein [Agrobacterium radiobacter K84]
gi|397722296|gb|EJK82840.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
AP16]
Length = 219
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 113/184 (61%), Gaps = 10/184 (5%)
Query: 16 FPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGTK 68
F P+ P E+AFAGRSNVGKSS++NAL G+ RTS+ PG TQ +N+F G
Sbjct: 28 FLPPEGPLEVAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGFSGEGGD 87
Query: 69 L---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
L LVD+PGYG+A A +E DAW +LV +Y+ R +LKRV +LID++ G+K D E++
Sbjct: 88 LPPMALVDMPGYGYAEAPKEQVDAWTKLVFDYLRGRTTLKRVYVLIDSRHGIKKNDEEVL 147
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+L++++ YQ+VLTKTD + + + E ++ + ++ SS+ G G+ +
Sbjct: 148 ALLDKAAVSYQIVLTKTDKIKEAGLPKLLADTAEKIRKRPAAYPGILSTSSEKGDGLEEV 207
Query: 186 RTVL 189
R +
Sbjct: 208 RQAI 211
>gi|225686779|ref|YP_002734751.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
ATCC 23457]
gi|225642884|gb|ACO02797.1| GTP-binding conserved hypothetical protein [Brucella melitensis
ATCC 23457]
Length = 267
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F +
Sbjct: 74 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGE 133
Query: 65 LGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 134 NGDLPPLALVDMPGYGFAEAPKVQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 193
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 194 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 253
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 254 DDLRAAIA 261
>gi|256262087|ref|ZP_05464619.1| ATP/GTP-binding site domain-containing protein A [Brucella
melitensis bv. 2 str. 63/9]
gi|384213538|ref|YP_005602621.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
M5-90]
gi|384410640|ref|YP_005599260.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
M28]
gi|384447137|ref|YP_005661355.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
NI]
gi|263091776|gb|EEZ16107.1| ATP/GTP-binding site domain-containing protein A [Brucella
melitensis bv. 2 str. 63/9]
gi|326411187|gb|ADZ68251.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
M28]
gi|326554478|gb|ADZ89117.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
M5-90]
gi|349745134|gb|AEQ10676.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis
NI]
Length = 241
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F
Sbjct: 48 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGE 107
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 108 NGDLPPLALVDMPGYGFAEAPKVQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 167
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 168 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 227
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 228 DDLRAAIA 235
>gi|417099766|ref|ZP_11959897.1| GTP-binding protein [Rhizobium etli CNPAF512]
gi|327192536|gb|EGE59488.1| GTP-binding protein [Rhizobium etli CNPAF512]
Length = 217
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 117/189 (61%), Gaps = 10/189 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDE 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQ+VLTKTD + V + + + ++ + V+ SS+ G G+
Sbjct: 141 DVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPAVLSTSSEKGDGL 200
Query: 183 RSLRTVLSK 191
LR +++
Sbjct: 201 DDLRQAIAQ 209
>gi|294010744|ref|YP_003544204.1| GTP-binding protein [Sphingobium japonicum UT26S]
gi|292674074|dbj|BAI95592.1| GTP-binding protein [Sphingobium japonicum UT26S]
Length = 215
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 19 PDLP--EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLC--LVDL 74
PD+ E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF +G L LVD+
Sbjct: 34 PDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDVGDPLRFRLVDM 93
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A A +++ W LV +Y+ R LKR +LID++ G+K D +++ +++ +
Sbjct: 94 PGYGYAKAPKDMVRKWRFLVNDYLRGRAKLKRTLVLIDSRHGIKDVDTDILDMLDAAAVS 153
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
Y++VLTK D V +A + E+++ + ++ SS+ G G+ LR +
Sbjct: 154 YRIVLTKADKVKASHLAEVRHSVTEAIRKRPAAHPDIIATSSEKGMGLPELRAAV 208
>gi|148556520|ref|YP_001264102.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas
wittichii RW1]
gi|148501710|gb|ABQ69964.1| GTP-binding protein, HSR1-related [Sphingomonas wittichii RW1]
Length = 220
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 15/197 (7%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P P PE+AFAGRSNVGKSS+LN LT + G+ RTS+ PG TQ +NFF
Sbjct: 22 VSFLKSAPDLRYLPDPVAPEVAFAGRSNVGKSSLLNRLTNRVGLARTSNTPGRTQELNFF 81
Query: 64 KLGTK-------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
+G L LVD+PGYGFA A +++ W +V +Y+ RV L+R +LID++ G
Sbjct: 82 DVGADEEGGVPALRLVDMPGYGFAKAPKDIVRKWRHVVNDYLRGRVVLRRALVLIDSRHG 141
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVA----RRAMQIEESLKANNSLVQPVM 172
+K D E++ +++++ Y +VLTK D + ++A R A + + A+ L +
Sbjct: 142 IKDVDREIMEMLDKAAVTYHLVLTKADKIKASELAAVTERTAAEARTHVAAHPRL----L 197
Query: 173 MVSSKSGAGIRSLRTVL 189
+ SS+ G+ LR +
Sbjct: 198 VTSSEKDMGMAELRAAI 214
>gi|386398880|ref|ZP_10083658.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bradyrhizobium
sp. WSM1253]
gi|385739506|gb|EIG59702.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bradyrhizobium
sp. WSM1253]
Length = 217
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 QFIWASPSTETLPPMAGLEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ K L LVD+PGYG+A A + +W EL+ +++ R SL RV +L+D + G+K D
Sbjct: 82 VPGKSELRLVDMPGYGYAKAPKSQVASWTELIHKFLLGRASLARVYVLVDARHGLKDVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQ+VLTK D + ++ R ++ E +L + V+ SS+S G+
Sbjct: 142 EVLKTLDRSAVSYQIVLTKADQIKATELQSRIIETEAALAKRPAAFPNVLATSSRSATGM 201
Query: 183 RSLRTVLSKI 192
LR ++K+
Sbjct: 202 AELRAAIAKL 211
>gi|49474532|ref|YP_032574.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella quintana
str. Toulouse]
gi|81646890|sp|Q6FZ15.1|ENGB_BARQU RecName: Full=Probable GTP-binding protein EngB
gi|49240036|emb|CAF26455.1| GTP-binding protein cgpA [Bartonella quintana str. Toulouse]
Length = 215
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLGT- 67
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRTQELNYFVPDGFSGEPGNL 86
Query: 68 -KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW L+ Y+ R +LKRV +LID++ G+K D +++
Sbjct: 87 PPIALVDMPGYGFAEAPKNLVDAWTHLIFSYLRGRTTLKRVYVLIDSRHGIKKNDGDVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D ++A+ M + L + + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKTKSNELAKLIMITKTKLLKHPAAYPELLVTSSEKALGLEELR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQAIA 214
>gi|158425674|ref|YP_001526966.1| ribosome biogenesis GTP-binding protein YsxC [Azorhizobium
caulinodans ORS 571]
gi|158332563|dbj|BAF90048.1| GTP-binding protein [Azorhizobium caulinodans ORS 571]
Length = 223
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F AA P EIA GRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 31 KFVTAAPTVDVLPPMQGVEIALVGRSNVGKSSLVNALTGRTALARTSVTPGRTQELIFFR 90
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
++ LVD+PGYGFA A ++ DAW ++ Y+ RV+L RV +LID + G+KP D E+
Sbjct: 91 CVPEMMLVDMPGYGFAKAPKDKVDAWVATIRAYLRGRVNLARVFVLIDARHGIKPVDAEI 150
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++++ Y +VLTK+D V D+ ++ ++ + V SS G G+
Sbjct: 151 LDLLDKAAVSYAIVLTKSDQVKRTDLEAVIADTKDKIRRRPAAFPEVFPTSSHGGKGLAE 210
Query: 185 LRTVLSKI 192
LR +++I
Sbjct: 211 LRAAIARI 218
>gi|429767811|ref|ZP_19299995.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas
diminuta 470-4]
gi|429189769|gb|EKY30588.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas
diminuta 470-4]
Length = 222
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 106/171 (61%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
P PDLPEIAFAGRSNVGKSS++N L + R S++PG T+ +NFF L ++ LVDLP
Sbjct: 40 LPTPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNEPGRTREVNFFDLDGRMRLVDLP 99
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A A + +++L ++Y+ RV+LKRV LLID++ G+K D E + ++ S Y
Sbjct: 100 GYGWAKASKTTVKKFQDLGRDYLRGRVTLKRVYLLIDSRHGLKKVDDEALDALDLSAVSY 159
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
Q+VLTK D + + + +++ + V + SS+ G G+ LR
Sbjct: 160 QIVLTKADKLKAGEAEKVQAATLKAIAKRPAAYPHVAVTSSEKGLGLPELR 210
>gi|94495880|ref|ZP_01302459.1| GTP-binding protein [Sphingomonas sp. SKA58]
gi|94424572|gb|EAT09594.1| GTP-binding protein [Sphingomonas sp. SKA58]
Length = 215
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 19 PDLP--EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLC--LVDL 74
PD+ E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF +G L LVD+
Sbjct: 34 PDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDVGDPLRFRLVDM 93
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A A +++ W LV +Y+ R +LKR +LID++ G+K D +++ +++ +
Sbjct: 94 PGYGYAKAPKDMVKKWRFLVNDYLRGRAALKRTLVLIDSRHGIKDVDTDMLDMLDGAAVS 153
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
Y++VLTK D + +A Q ++++ + ++ SS+ G G+ LR +
Sbjct: 154 YRIVLTKADKIKASALAAVTQQTADAIRKRPAAHPDIIATSSEKGMGLPELRAAV 208
>gi|405377573|ref|ZP_11031514.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
CF142]
gi|397326010|gb|EJJ30334.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium sp.
CF142]
Length = 217
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 116/189 (61%), Gaps = 10/189 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SMKFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GNDLPPMALVDMPGYGYAQAPKEQVDNWTKLVFDYLRGRSTLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQ+VLTKTD + V + + E ++ + V+ SS+ G+
Sbjct: 141 DVLTLLDKAAVSYQIVLTKTDKIKAPAVPKLLAETSEKIRKRPAAYPAVLSTSSEKNEGL 200
Query: 183 RSLRTVLSK 191
LR +++
Sbjct: 201 DELRQAIAE 209
>gi|56416888|ref|YP_153962.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale
str. St. Maries]
gi|222475253|ref|YP_002563669.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale
str. Florida]
gi|255003237|ref|ZP_05278201.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale
str. Puerto Rico]
gi|269958697|ref|YP_003328484.1| GTPase EngB [Anaplasma centrale str. Israel]
gi|81359025|sp|Q5PAH3.1|ENGB_ANAMM RecName: Full=Probable GTP-binding protein EngB
gi|254783183|sp|B9KIV1.1|ENGB_ANAMF RecName: Full=Probable GTP-binding protein EngB
gi|56388120|gb|AAV86707.1| hypothetical protein AM764 [Anaplasma marginale str. St. Maries]
gi|222419390|gb|ACM49413.1| Probable GTP-binding protein engB [Anaplasma marginale str.
Florida]
gi|269848526|gb|ACZ49170.1| GTPase EngB [Anaplasma centrale str. Israel]
Length = 205
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 114/194 (58%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++K F A + S P +PE+AFAGRSNVGKSS++NA+T+ R S PG T+ I
Sbjct: 2 LSKCRFVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ L LVDLPGYG++ A +E ++ LV+ Y+ TR +L R+ LLID+K G+K
Sbjct: 62 NFYLNEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLIDSKVGLKEV 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + IS +E Y +VLTK D + + ++ +K L+ P++ SSKSG
Sbjct: 122 DMDFISWLEERCIHYSLVLTKIDRLACTEFNDVLSAVQSRVKGCCMLLHPIIGTSSKSGK 181
Query: 181 GIRSLRTVLSKIAR 194
GI+ L +SK +
Sbjct: 182 GIKELVHEVSKCVK 195
>gi|329888536|ref|ZP_08267134.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas
diminuta ATCC 11568]
gi|328847092|gb|EGF96654.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas
diminuta ATCC 11568]
Length = 222
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 106/171 (61%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
P PDLPEIAFAGRSNVGKSS++N L + R S++PG T+ +NFF L ++ LVDLP
Sbjct: 40 LPTPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNEPGRTREVNFFDLDGRMRLVDLP 99
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A A + +++L ++Y+ RV+LKRV LLID++ G+K D E + ++ S Y
Sbjct: 100 GYGWAKASKTTVKKFQDLGRDYLRGRVTLKRVYLLIDSRHGLKKVDDEALDALDLSAVSY 159
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
Q+VLTK D + + + +++ + V + SS+ G G+ LR
Sbjct: 160 QIVLTKADKLKKGEAEKVQAATLKAISKRPAAYPHVAVTSSEKGFGLPELR 210
>gi|255004364|ref|ZP_05279165.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale
str. Virginia]
Length = 205
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 114/194 (58%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++K F A + S P +PE+AFAGRSNVGKSS++NA+T+ R S PG T+ I
Sbjct: 2 LSKCRFVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ L LVDLPGYG++ A +E ++ LV+ Y+ TR +L R+ LLID+K G+K
Sbjct: 62 NFYLNEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLIDSKVGLKEV 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + IS +E Y +VLTK D + + ++ +K L+ P++ SSKSG
Sbjct: 122 DMDFISWLEERCIHYSLVLTKIDRLTCTEFNDVLSAVQSRVKGCCMLLHPIIGTSSKSGK 181
Query: 181 GIRSLRTVLSKIAR 194
GI+ L +SK +
Sbjct: 182 GIKELVHEVSKCVK 195
>gi|156100483|ref|XP_001615969.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804843|gb|EDL46242.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 988
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 5/192 (2%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
+ A S P P PEIAF GRSN GKS+++N L + + S PG T+ I+F+K+
Sbjct: 118 LYKTAIQVSELPLPKYPEIAFIGRSNCGKSTLINELCGRTNKAKVSKLPGCTKEIHFYKI 177
Query: 66 GTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
LCLVDLPGYGFA++KEE++ W E Y+ R +LK+V +LID + G+K D E
Sbjct: 178 AKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRKNLKKVFVLIDCRIGLKTSDKE 237
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
L+ +R KYQ+VL+K D + D+A + E + +L P++ +SS +
Sbjct: 238 LLHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIANEEIACFKNLEAPIIPLSSLKRQNLN 297
Query: 184 SLRTVLSKIARF 195
LR +IAR+
Sbjct: 298 ELR---REIARY 306
>gi|374572321|ref|ZP_09645417.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bradyrhizobium
sp. WSM471]
gi|374420642|gb|EHR00175.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bradyrhizobium
sp. WSM471]
Length = 232
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 37 QFIWASPSTETLPPMAGLEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 96
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ K L LVD+PGYG+A A + +W EL+ +++ R SL RV +L+D + G+K D
Sbjct: 97 VPGKSDLRLVDMPGYGYAKAPKSQVASWTELIHKFLLGRASLARVYVLVDARHGLKDVDL 156
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQ+VLTK D + ++ R ++ E +L + V+ SS+S G+
Sbjct: 157 EVLKTLDRSAVSYQIVLTKADQIKTTELQSRIVETEAALAKRPAAFPNVLATSSRSATGM 216
Query: 183 RSLRTVLSKI 192
LR ++K+
Sbjct: 217 AELRAAIAKL 226
>gi|110632739|ref|YP_672947.1| ribosome biogenesis GTP-binding protein YsxC [Chelativorans sp.
BNC1]
gi|119369212|sp|Q11LE3.1|ENGB_MESSB RecName: Full=Probable GTP-binding protein EngB
gi|110283723|gb|ABG61782.1| GTP-binding protein [Chelativorans sp. BNC1]
Length = 225
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PE+AFAGRSNVGKSS++N L + G+ RTS+ PG TQ +N+F + G
Sbjct: 36 LPPEGPPEVAFAGRSNVGKSSLINGLVGRKGLARTSNTPGRTQELNYFVPEGYSGEAGDL 95
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + DAW +LV +Y+ RV+LKRV LLID + G+K D E++
Sbjct: 96 PPMALVDMPGYGFAKAPKAQVDAWTKLVFDYLRGRVTLKRVYLLIDARHGIKKIDEEVMD 155
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++ + YQ+VLTK D + V + + + + + V+ SS+ G G+ LR
Sbjct: 156 LLDSAAVSYQIVLTKADKIKSPAVTKLVAETGQKIVKRPAAFPEVIATSSEKGEGLEELR 215
Query: 187 TVL 189
+
Sbjct: 216 AAI 218
>gi|395782885|ref|ZP_10463255.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella
rattimassiliensis 15908]
gi|395416372|gb|EJF82750.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella
rattimassiliensis 15908]
Length = 214
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 11/186 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F +LG
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRTQELNYFVPDGFSGQLGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
L LVD+PGYGFA A + + + W L+ Y+ R +LKRV +LID++ G+K D +++S
Sbjct: 87 PPLALVDMPGYGFAAAPKNLVEMWTNLIFSYLRGRTTLKRVYILIDSRHGIKNNDEDVLS 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA-GIRSL 185
L++++ YQ+VLTK+D + D + + I ++ P ++V+S A G++ L
Sbjct: 147 LLDKAAVSYQIVLTKSDKINS-DALEKLITITQTKIFKRPAAYPELLVTSSEKALGLKEL 205
Query: 186 RTVLSK 191
R + K
Sbjct: 206 RAAILK 211
>gi|218461047|ref|ZP_03501138.1| GTPase EngB [Rhizobium etli Kim 5]
Length = 217
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 118/194 (60%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG----- 66
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 67 ----TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDE 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++++L++++ YQ+VLTKTD + V + + + ++ + V+ SS+ G G+
Sbjct: 141 DVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPFVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 201 DDLRQAIAETVGIA 214
>gi|395788310|ref|ZP_10467874.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella birtlesii
LL-WM9]
gi|395408227|gb|EJF74838.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella birtlesii
LL-WM9]
Length = 215
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 114/190 (60%), Gaps = 10/190 (5%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK----LGTK- 68
S P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F G +
Sbjct: 25 SFLPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFTGQQD 84
Query: 69 ----LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVD+PGYGFA A + + DAW L+ Y+ R +LKRV +LID++ G+K D ++
Sbjct: 85 DLPPLALVDMPGYGFAEAPKNLVDAWINLIFSYLQGRTTLKRVYVLIDSRHGIKKNDADV 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L++++ YQ++ TK+D + D+ + + L + +++ SS+ G+
Sbjct: 145 LDLLDKAAVSYQIIFTKSDKIKSNDLEKLITTTKTKLLKRPAAYPELLVTSSEKAFGLEE 204
Query: 185 LR-TVLSKIA 193
LR +L IA
Sbjct: 205 LRAAILQTIA 214
>gi|357975434|ref|ZP_09139405.1| GTP-binding protein YsxC [Sphingomonas sp. KC8]
Length = 215
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P P E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF
Sbjct: 23 IAFLKSAPSLQFLPDPSALEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFF 82
Query: 64 KLGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+GT ++ LVD+PGYGFA A +++ W LV +Y+ R LKR +LID++ G+K D
Sbjct: 83 DVGTPPRMRLVDMPGYGFAKAPKDMVRKWRFLVNDYLRGRQVLKRALVLIDSRHGIKDVD 142
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ +++ + Y +VLTK D + ++ + + + + +++ SS++G G
Sbjct: 143 RDVLKMLDEAAVSYHLVLTKADKIKASELVAVTERTVAEGRTHVAAHPEILVTSSETGLG 202
Query: 182 IRSLRTVL 189
+ LR +
Sbjct: 203 MAELRAAI 210
>gi|302381827|ref|YP_003817650.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas
subvibrioides ATCC 15264]
gi|302192455|gb|ADL00027.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas
subvibrioides ATCC 15264]
Length = 213
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 108/183 (59%), Gaps = 7/183 (3%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
AAK+ P PDLPEIAFAGRSNVGKSS++N L + R S++PG T+ +NFF L
Sbjct: 24 MGAAKIEQ-LPEPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNEPGRTREVNFFDLD 82
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
KL LVDLPGYG+A A + ++ L ++Y+ RV+LKRV LLID + G+K D E +
Sbjct: 83 AKLRLVDLPGYGWAKASKSTVRQFQNLGRDYLRGRVTLKRVYLLIDARHGLKSVDTEALD 142
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA---NNSLVQPVMMVSSKSGAGIR 183
++ + YQ+VLTK D I R +LKA + V + S++ G G+
Sbjct: 143 ALDLAAVSYQIVLTKADK---IKAHERDTVQAATLKAISKRPAAFPAVAVTSAEKGLGLP 199
Query: 184 SLR 186
LR
Sbjct: 200 ELR 202
>gi|237831355|ref|XP_002364975.1| GTP-binding conserved hypothetical domain-containing protein
[Toxoplasma gondii ME49]
gi|211962639|gb|EEA97834.1| GTP-binding conserved hypothetical domain-containing protein
[Toxoplasma gondii ME49]
gi|221506860|gb|EEE32477.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1466
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+LE + A P P LPEIAFAGRSNVGKSS+LN L + + +PG TQ ++F
Sbjct: 437 RLEKWRTALREEELPPPTLPEIAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQQLHF 496
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
FK G+ LCLVDLPGYGFA A + W E Y+ TR +L+RV +L+D + G+K
Sbjct: 497 FKAGSPPVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLVDARHGLKES 556
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA 163
D E++ + R +Q+VLTK D V P D+ + M ++E KA
Sbjct: 557 DKEMLHFLHRWGVSWQIVLTKADLVKPKDLVKTLMLVKEDAKA 599
>gi|221487174|gb|EEE25420.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1466
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+LE + A P P LPEIAFAGRSNVGKSS+LN L + + +PG TQ ++F
Sbjct: 437 RLEKWRTALREEELPPPTLPEIAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQQLHF 496
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
FK G+ LCLVDLPGYGFA A + W E Y+ TR +L+RV +L+D + G+K
Sbjct: 497 FKAGSPPVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLVDARHGLKES 556
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA 163
D E++ + R +Q+VLTK D V P D+ + M ++E KA
Sbjct: 557 DKEMLHFLHRWGVSWQIVLTKADLVKPKDLVKTLMLVKEDAKA 599
>gi|218679046|ref|ZP_03526943.1| GTPase EngB [Rhizobium etli CIAT 894]
Length = 185
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 9/182 (4%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGTKL---CLVDL 74
+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F G L +VD+
Sbjct: 1 MAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGEGGDLPPTAIVDM 60
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D +++ L++++
Sbjct: 61 PGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEDVLDLLDKAAVS 120
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
YQ+VLTKTD + V + + E ++ + V+ SS+ G G+ LR +++
Sbjct: 121 YQIVLTKTDKIKAAGVPKLLAETAERIRKRPAAYPAVLSTSSEKGDGMDELRQAIAETVG 180
Query: 195 FA 196
A
Sbjct: 181 IA 182
>gi|393721373|ref|ZP_10341300.1| GTP-binding protein YsxC [Sphingomonas echinoides ATCC 14820]
Length = 212
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 113/188 (60%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P +PE+AFAGRSNVGKSS+LNALT + + RTS+ PG TQ +NFF
Sbjct: 19 IAFLKSAPTIEFLPDAVVPEVAFAGRSNVGKSSLLNALTGRNSLARTSNTPGRTQELNFF 78
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYGFA A +++ W +V +++ R LKR +LID + G+K D
Sbjct: 79 DVGNPLAFRLVDMPGYGFAKAPKDMVKKWRFMVNDFLRGRDVLKRALVLIDARHGIKDVD 138
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ +++++ Y++V+TK D + ++A + + + +++ SS++G G
Sbjct: 139 RDILEMLDKAAVSYRMVITKADKIKASELAEVTQATADEARKRPAAHPEILVTSSETGLG 198
Query: 182 IRSLRTVL 189
I LR +
Sbjct: 199 IPELRAAV 206
>gi|254995072|ref|ZP_05277262.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale
str. Mississippi]
Length = 205
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++K F A + S P +PE+AFAGRSNVGKSS++NA+T+ R S PG T+ I
Sbjct: 2 LSKCRFVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ L LVDLPGYG++ A +E ++ LV+ Y+ TR +L R+ LLID+K G+K
Sbjct: 62 NFYLNEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLIDSKVGLKEV 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + IS +E Y +VLTK D + ++ +K L+ P++ SSKSG
Sbjct: 122 DMDFISWLEERCIHYSLVLTKIDRLTCTGFNDVLSAVQSRVKGCCMLLHPIIGTSSKSGK 181
Query: 181 GIRSLRTVLSKIAR 194
GI+ L +SK +
Sbjct: 182 GIKELVHEVSKCVK 195
>gi|67458477|ref|YP_246101.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia felis
URRWXCal2]
gi|75537053|sp|Q4UNC2.1|ENGB_RICFE RecName: Full=Probable GTP-binding protein EngB
gi|67004010|gb|AAY60936.1| Hypothetical GTP-binding protein [Rickettsia felis URRWXCal2]
Length = 212
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ WE L+ Y+ SL+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSYSLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V R+ + E ++ A + VM VSS+S G R
Sbjct: 143 AELLLANKREFQIIFTKSDKV----TDRKNLNDEAQNFLATLNYSCNVMYVSSRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|383774849|ref|YP_005453918.1| GTP-binding protein EngB [Bradyrhizobium sp. S23321]
gi|381362976|dbj|BAL79806.1| probable GTP-binding protein EngB [Bradyrhizobium sp. S23321]
Length = 220
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P D EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 25 QFIWASPSVQTLPPMDGLEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 84
Query: 65 LGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ K L LVD+PGYG+A A + +W EL+ +++ R SL RV +L+D + G+K D
Sbjct: 85 VPGKKDLRLVDMPGYGYAKAPKSQVASWTELIHKFLLGRASLARVYVLVDARHGLKDVDL 144
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ ++RS YQ+VLTK D V ++ + E +L + + V+ SS+S G+
Sbjct: 145 EILGTLDRSAVSYQIVLTKADQVKASELQTCIAETEAALAKHPAAFPNVLATSSRSSTGM 204
Query: 183 RSLRTVLSKI 192
LR ++K+
Sbjct: 205 AELRAAIAKL 214
>gi|345304334|ref|YP_004826236.1| GTP-binding protein engB [Rhodothermus marinus SG0.5JP17-172]
gi|345113567|gb|AEN74399.1| GTP-binding protein engB [Rhodothermus marinus SG0.5JP17-172]
Length = 198
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 1/180 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
FF + P LPE+AFAGRSNVGKSS+LNAL R G+ RTS PG T+ +NF+++
Sbjct: 8 FFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQLNFYRV 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+L VDLPGYG+A ++ + W L+ Y+ R +L V LID++ P D ++
Sbjct: 68 NEQLYFVDLPGYGYARTSQQERRLWGRLITRYLQERPTLALVVHLIDSRHPPTPLDEAMM 127
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
LM Y + LTKTD V A+ ++E +L+A ++ P++ S+ +G G+R L
Sbjct: 128 DLMRGQHVPYLIALTKTDKVSGNRRAQAVREVERALQA-RAMEVPIIPTSAHTGLGLRDL 186
>gi|440802592|gb|ELR23521.1| ribosome biogenesis GTPbinding protein YsxC, putative [Acanthamoeba
castellanii str. Neff]
Length = 311
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 3/193 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A++ + + PA D PE AF GRSNVGKSS+LNAL + + RTS+ PG TQTIN+++
Sbjct: 122 FLASSVAAPNLPAEDQPEFAFVGRSNVGKSSLLNALLSK-PLARTSNTPGRTQTINYYQA 180
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G+ + LVDLPGYG+A A + W++ V +++TR SL +L+D++ G+ +D E+I
Sbjct: 181 GS-VKLVDLPGYGYAKAPVRIVREWQQFVNTFLTTRKSLYNTSVLVDSRRGITDKDAEVI 239
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
++ +QVVLTK D + ++ + +E +K + P++ ++SK G G+ L
Sbjct: 240 QMLNTHGLPHQVVLTKADKLSRREIFVVLAETKERIK-RSPFCSPIIYITSKDGLGVDEL 298
Query: 186 RTVLSKIARFAKV 198
R L + A+ ++
Sbjct: 299 RIGLMRAAKSNQI 311
>gi|294853977|ref|ZP_06794649.1| GTP-binding protein [Brucella sp. NVSL 07-0026]
gi|294819632|gb|EFG36632.1| GTP-binding protein [Brucella sp. NVSL 07-0026]
Length = 267
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 111/188 (59%), Gaps = 10/188 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S F P+ P EIAFAGRSNVGKSS++NAL + G+ RTS+ PG TQ +N+F +
Sbjct: 74 SMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGE 133
Query: 65 LGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGY FA A + DAW LV +Y+ R +LKRV +LID + G+K D
Sbjct: 134 NGDLPPLALVDMPGYSFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARHGIKKNDA 193
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
E++ L++++ YQ+VLTK D + P V R + + + ++ SS+ G G+
Sbjct: 194 EVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACFPGIIATSSEKGQGL 253
Query: 183 RSLRTVLS 190
LR ++
Sbjct: 254 DDLRAAIA 261
>gi|254419207|ref|ZP_05032931.1| GTPase, putative [Brevundimonas sp. BAL3]
gi|196185384|gb|EDX80360.1| GTPase, putative [Brevundimonas sp. BAL3]
Length = 217
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 114/184 (61%), Gaps = 7/184 (3%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
AAK+ P PDLPEIAFAGRSNVGKSS++N L + R S++PG T+ +NFF L
Sbjct: 26 IMGAAKIEQ-LPDPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNEPGRTREVNFFDL 84
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
++ LVDLPGYG+A A + +++L ++Y+ RV+LKRV LLID++ G+K D E +
Sbjct: 85 DGRMRLVDLPGYGWAKASKTTVRKFQDLGRDYLRGRVTLKRVYLLIDSRHGLKSVDKEAL 144
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA---NNSLVQPVMMVSSKSGAGI 182
++ + YQ+VLTK D + + A+Q E +LKA + V + SS+ G G+
Sbjct: 145 DALDLAAVSYQIVLTKADKLKKGE--GEAVQ-EATLKAISKRPAAFPVVALTSSEKGLGL 201
Query: 183 RSLR 186
LR
Sbjct: 202 PELR 205
>gi|83315808|ref|XP_730953.1| GTP-binding protein EngB [Plasmodium yoelii yoelii 17XNL]
gi|23490838|gb|EAA22518.1| probable GTP-binding protein engb, putative [Plasmodium yoelii
yoelii]
Length = 951
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
++ + A + P P PEIAF GRSN GKS+++N L + + S PG T+ I+F
Sbjct: 94 RMVLYKVAIKVNELPLPKYPEIAFIGRSNSGKSTLINELCGRSNKAKVSKMPGCTKQIHF 153
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
+K+G LCLVDLPGYGFA++KEE++ W E Y+ R +LK+V +LID + G+K
Sbjct: 154 YKIGKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRTNLKKVFVLIDCRIGLKTS 213
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D EL +R KYQ+VL+K D + D+A + + E + +L + ++ +SS
Sbjct: 214 DKELFHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIMNEEIVHFKNLEKNIISLSSLKRQ 273
Query: 181 GIRSLRTVLSK 191
+ LR ++K
Sbjct: 274 NLNELRNEIAK 284
>gi|124809435|ref|XP_001348574.1| GTP binding protein, putative [Plasmodium falciparum 3D7]
gi|23497470|gb|AAN37013.1| GTP binding protein, putative [Plasmodium falciparum 3D7]
Length = 1000
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
++ + A + P P PEIAF GRSN GKS+++N L + + S PG T+ I+F
Sbjct: 95 RMVLYKTAIQVNELPLPKYPEIAFIGRSNCGKSTLINELCGRTNKAKVSKIPGCTKEIHF 154
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
+K+G +CLVDLPGYG+A KEE++ W E Y+ R +LK+V +LID + G+K
Sbjct: 155 YKIGKPCLMCLVDLPGYGYAECKEELRLQWNEFTLFYLKNRKNLKKVFVLIDCRVGLKTS 214
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D EL+ +R KYQ+VL+K D + D+A + I + + +L +P++ +SS
Sbjct: 215 DKELLHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIINQDILPFKNLEKPLIPLSSIKNQ 274
Query: 181 GIRSLRTVLSK 191
+ LR ++K
Sbjct: 275 NLSELRNEIAK 285
>gi|268318043|ref|YP_003291762.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
gi|262335577|gb|ACY49374.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
Length = 198
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
FF + P LPE+AFAGRSNVGKSS+LNAL R G+ RTS PG T+ +NF+++
Sbjct: 8 FFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQLNFYRV 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+L VDLPGYG+A +E + W L+ Y+ R +L V LID++ P D ++
Sbjct: 68 NEQLYFVDLPGYGYARTSQEERRLWGRLITRYLQERPTLALVVHLIDSRHPPTPLDEAMM 127
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
LM Y + LTK D V A+ ++E +L+A ++ P++ S+ +G G+R L
Sbjct: 128 DLMRGQHVPYLIALTKADKVSGNRRAQAVREVERALQA-RAMEVPIIPTSAHTGLGLRDL 186
>gi|319898440|ref|YP_004158533.1| GTP-binding protein [Bartonella clarridgeiae 73]
gi|319402404|emb|CBI75945.1| GTP-binding protein [Bartonella clarridgeiae 73]
Length = 213
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 9/186 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF---------KLG 66
PA PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F +
Sbjct: 26 LPAEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYFIPDGFNGQSQNF 85
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ VD+PGYGFA A + + +AW L+ +Y+ R +LKRV +LID++ G+K D E +
Sbjct: 86 PPIAFVDMPGYGFAEAPKHLVNAWTHLIFDYLRGRTTLKRVYVLIDSRHGIKKNDIETFN 145
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + M + L + + +++ S+K G+ LR
Sbjct: 146 LLDKAAVSYQIVLTKSDKIKSDALKALIMITKTKLLKHPAAYPEILVTSAKKTFGLEELR 205
Query: 187 TVLSKI 192
T + ++
Sbjct: 206 TAIIQV 211
>gi|395783915|ref|ZP_10463763.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella melophagi
K-2C]
gi|395425183|gb|EJF91353.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella melophagi
K-2C]
Length = 215
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 9/193 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-- 63
F + P PEIAF GRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F
Sbjct: 17 FIRSVPAIQCLPPEGPPEIAFVGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFIP 76
Query: 64 -KLGTK------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
L + + LVD+PGYGFA A + +AW L+ Y+ R +LKR +LID++ G
Sbjct: 77 ENLSDQKEDFPPIALVDMPGYGFAKAPKNCVEAWTRLIFNYLRGRTTLKRAYVLIDSRHG 136
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+K D +++ L++++ YQ+VLTK+D + P + ++++ + + +++ SS
Sbjct: 137 IKKNDTDVLDLLDKAAVSYQIVLTKSDKIKPNALETLVTTTKKNILKHPAAYPELLITSS 196
Query: 177 KSGAGIRSLRTVL 189
+ G+ LRT +
Sbjct: 197 QKALGLEELRTAI 209
>gi|390166044|ref|ZP_10218314.1| GTP-binding protein YsxC [Sphingobium indicum B90A]
gi|389591108|gb|EIM69086.1| GTP-binding protein YsxC [Sphingobium indicum B90A]
Length = 215
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 19 PDLP--EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLC--LVDL 74
PD+ E+AFAGRSNVGKSS+LNALT + G+ RTS+ PG TQ +NFF +G L LVD+
Sbjct: 34 PDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDVGDPLRFRLVDM 93
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A A +++ W LV +Y+ R LKR +LID++ G+K D +++ +++ +
Sbjct: 94 PGYGYAKAPKDMVRKWRFLVNDYLRGRPKLKRTLVLIDSRHGIKDVDTDILDMLDAAAVS 153
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
Y++VLTK D V +A + ++++ + ++ SS+ G G+ LR +
Sbjct: 154 YRIVLTKADKVKASHLAEVKQAVTDAIRKRPAAHPDIIATSSEKGMGLPELRAAV 208
>gi|70949402|ref|XP_744115.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523930|emb|CAH79943.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 929
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
++ + A + P P PEIAF GRSN GKS+++N L + + S PG T+ I+F
Sbjct: 94 RMVLYKVAIKVNELPLPKYPEIAFIGRSNSGKSTLINELCGRSNKAKVSKMPGCTKQIHF 153
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
+K+G LCLVDLPGYGFA++KEE++ W E Y+ R +LK+V +LID + G+K
Sbjct: 154 YKIGKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRANLKKVFVLIDCRIGLKTS 213
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D EL +R KYQ+VL+K D + D+A + + E + +L + ++ +SS
Sbjct: 214 DKELFHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIMNEEIVHFKNLEKNIISLSSLKRQ 273
Query: 181 GIRSLRTVLSK 191
+ LR ++K
Sbjct: 274 NLNELRNEIAK 284
>gi|90422336|ref|YP_530706.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris BisB18]
gi|119369245|sp|Q21B49.1|ENGB_RHOPB RecName: Full=Probable GTP-binding protein EngB
gi|90104350|gb|ABD86387.1| GTP-binding [Rhodopseudomonas palustris BisB18]
Length = 216
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK--LGTKLCLVDLPGYGFA 80
E+AFAGRSNVGKSS++NALT + + RTS PG TQ + FF+ LVD+PGYG+A
Sbjct: 40 EVAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFEGPENANFRLVDMPGYGYA 99
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
A + +W L+ ++ R +L RV +LID + G+K D ++++ +++S YQVVLT
Sbjct: 100 SAPKAKIASWTSLIHNFLQGRSTLARVYVLIDARHGLKEVDQDVLNTLDKSAVSYQVVLT 159
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
K D V P ++A+ + +E L+ + + +++ SS++GAG+ LR + K+
Sbjct: 160 KADQVKPAELAQCRIDVEAGLRKHPAAYPELLVTSSRTGAGMPELRAAMIKL 211
>gi|443712422|gb|ELU05759.1| hypothetical protein CAPTEDRAFT_113940, partial [Capitella teleta]
Length = 195
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK-- 64
FAAAK +S P + E+AFAGRSNVGKSS++NALT Q + RTS +PG TQ + FF
Sbjct: 3 FAAAK-ASGLPEAEGVEVAFAGRSNVGKSSLINALTGQANLARTSHQPGRTQEVIFFANP 61
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVDLPGYG+A +++K W +L+ +Y++ R +L RV LL+D++ GV DH
Sbjct: 62 AAPNLGLVDLPGYGYAAVSKKLKRDWGQLILDYLAGRPNLVRVFLLVDSRRGVGEIDHPA 121
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ L+++ YQ+VLTK D V ++ + ++ +S+ + ++ SS G G
Sbjct: 122 MDLLDKVALSYQIVLTKVDKVKIDELDQIRAKVVKSISKRPAAYPDIIETSSAEGTGTDE 181
Query: 185 LRTVLSKIAR 194
LR + ++A+
Sbjct: 182 LRKTILRLAQ 191
>gi|451940953|ref|YP_007461591.1| GTPase EngB [Bartonella australis Aust/NH1]
gi|451900340|gb|AGF74803.1| GTPase EngB [Bartonella australis Aust/NH1]
Length = 215
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 113/189 (59%), Gaps = 10/189 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQQLNYFVPDGFSGQPGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
L LVD+PGYGFA A + + DAW L+ Y+ R +LKRV +LID++ G+K D +++
Sbjct: 87 PPLALVDMPGYGFAEAPKNLVDAWTHLIFNYLQGRTTLKRVYVLIDSRHGIKKNDIDVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ++ TK+D + + + + + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIIFTKSDKIKSSVLENLIITTKTKFLKRPAAYPELLVTSSEKALGLEELR 206
Query: 187 T-VLSKIAR 194
+ +L IAR
Sbjct: 207 SAILGAIAR 215
>gi|426401580|ref|YP_007020552.1| GTP-binding protein [Candidatus Endolissoclinum patella L2]
gi|425858248|gb|AFX99284.1| GTP-binding conserved hypothetical domain protein [Candidatus
Endolissoclinum patella L2]
Length = 222
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 114/193 (59%), Gaps = 3/193 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A++ S P LPE+AF GRSNVGKSS++NALT + + R S+ PG TQ I FF L
Sbjct: 25 FVASSATSLQLPMEKLPEVAFMGRSNVGKSSLVNALTGRKTMARQSNTPGRTQEIIFFNL 84
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K+ LVDLPGYG+A A + + W + + Y+ R +L+RV LLID++ G+K D ++
Sbjct: 85 SEKIILVDLPGYGYAKASKVKQAIWIKNIFNYLRYRTTLRRVSLLIDSRRGLKDIDDVIM 144
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+++++ YQVVLTK D V I++A +I + + V S SG GI L
Sbjct: 145 NILDKIAISYQVVLTKVDKVKQIELAIMIEKIITKILYRPAAYPIVGATSVVSGIGILEL 204
Query: 186 RTVLSKIARFAKV 198
+ L+ RFA +
Sbjct: 205 QVELT---RFANI 214
>gi|319405205|emb|CBI78810.1| GTP-binding protein [Bartonella sp. AR 15-3]
Length = 214
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 112/183 (61%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF---------KLG 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYFIPDGFNGQTHHL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + +AW L+ +Y+ R +LKRV +LID++ G+K D + ++
Sbjct: 87 PPVALVDMPGYGFAEAPKNLINAWTHLIFDYLRGRTTLKRVYVLIDSRHGIKKNDTDTLN 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + + + L +++ +++ S++ +G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKLNTLEALIIMTKTKLLKHSAAYPEILVTSAEKASGLEELR 206
Query: 187 TVL 189
T +
Sbjct: 207 TAI 209
>gi|254293246|ref|YP_003059269.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814]
gi|254041777|gb|ACT58572.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814]
Length = 213
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 104/172 (60%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
P D PEIAFAGRSNVGKSS++NAL + + R S +PG TQ INFF + L +VDL
Sbjct: 35 GLPPADRPEIAFAGRSNVGKSSLINALFNRKQLARASGQPGRTQEINFFTILEALYVVDL 94
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA A + V D W + Y+ R +L+RV LLID++ GV D ++ +++R+
Sbjct: 95 PGYGFAKAPKAVVDKWTNFTQTYLRGRTNLQRVFLLIDSRRGVGDVDRGIMKVLDRAALN 154
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
YQ+VLTK D + ++ + ++K N + +M+ S++ G+ L+
Sbjct: 155 YQIVLTKADKLKKSELDKVIDDAVVAIKKNPAAHPRIMLTSAEKNIGLPELK 206
>gi|85717143|ref|ZP_01048102.1| GTP-binding protein [Nitrobacter sp. Nb-311A]
gi|85696034|gb|EAQ33933.1| GTP-binding protein [Nitrobacter sp. Nb-311A]
Length = 249
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK--LGTKLCLVDLPGYGFA 80
E+AFAGRSNVGKSS++NALT + + RTS PG TQ + FF+ GT + LVD+PGYGFA
Sbjct: 72 EVAFAGRSNVGKSSLINALTGRNALARTSRTPGRTQELIFFEGPKGTDVRLVDMPGYGFA 131
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
A ++ +W L+ ++ R +L RV +LID++ G+K D +++ ++R+ YQVVLT
Sbjct: 132 SAPKDRIASWTSLIHRFLLGRATLARVYVLIDSRHGIKDTDRNVLTTLDRAAVSYQVVLT 191
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
K D V ++ +R L ++++ V+ SS++G G+ LR ++++
Sbjct: 192 KADEVKAAELEKRIDATRTQLLSHSAAFPDVLATSSRTGYGMPELRAAMARL 243
>gi|299132594|ref|ZP_07025789.1| ribosome biogenesis GTP-binding protein YsxC [Afipia sp. 1NLS2]
gi|298592731|gb|EFI52931.1| ribosome biogenesis GTP-binding protein YsxC [Afipia sp. 1NLS2]
Length = 221
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 7/197 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+FF A+ + P EIAFAGRSNVGKSS++NALT + G+ RTS PG TQ + FFK
Sbjct: 22 QFFWASPSIETLPTMQGVEIAFAGRSNVGKSSLINALTNRNGLARTSHTPGRTQELIFFK 81
Query: 65 -------LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
+L LVD+PGYG+A A + +W +L+ ++ R +L RV +LID++ G
Sbjct: 82 GPGPLDARTPELRLVDMPGYGYASAPKTQIASWTKLIHNFLLGRANLARVYVLIDSRHGF 141
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
K D+E+++ ++++ YQ+VLTK D V + + E L+ + + +++ SS+
Sbjct: 142 KDADNEVLTTLDKAAVSYQIVLTKADQVKKAALEETMAAMAEKLRKHPAAFPEMLVTSSR 201
Query: 178 SGAGIRSLRTVLSKIAR 194
G G+ +R + K+ R
Sbjct: 202 DGGGMAEMRAAIVKLLR 218
>gi|401407526|ref|XP_003883212.1| Ribosome biogenesis GTP-binding protein YsxC,related [Neospora
caninum Liverpool]
gi|325117628|emb|CBZ53180.1| Ribosome biogenesis GTP-binding protein YsxC,related [Neospora
caninum Liverpool]
Length = 1085
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+L + AA P P LPE+AFAGRSNVGKSS+LN L + + +PG TQ ++F
Sbjct: 15 RLGKWRAALREEELPPPILPEVAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQHLHF 74
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
FK G+ LCLVDLPGYGFA A + W E Y+ TR +L+RV +LID + G+K
Sbjct: 75 FKAGSPPVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLIDARHGLKES 134
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA-NNSLVQPVMM 173
D E++ + R +Q+VLTK D V P D+ + M ++E KA + PV +
Sbjct: 135 DKEMLHFLHRWGVSWQLVLTKADLVKPKDLVKTLMLVKEDAKAFRHQAADPVAV 188
>gi|389585433|dbj|GAB68164.1| probable GTP-binding protein [Plasmodium cynomolgi strain B]
Length = 859
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
++ + A S P P PEIAF GRSN GKS+++N L + + S PG T+ I+F
Sbjct: 32 RMILYKTAIQVSELPLPKYPEIAFIGRSNCGKSTLINELCGRTNKAKVSKLPGCTKQIHF 91
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
+K+ LCLVDLPGYGFA++KEE++ W E Y+ R +LK+V +LID + G+K
Sbjct: 92 YKIAKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRKNLKKVFVLIDCRVGLKTS 151
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D EL+ +R KYQ+V +K D + D+A + E + +L P++ +SS
Sbjct: 152 DKELLHFFDRYNIKYQIVFSKCDLLNTKDLAIKIQIANEEIACFKNLEAPIIPLSSLKRQ 211
Query: 181 GIRSLRTVLSKIARF 195
+ LR +IAR+
Sbjct: 212 NLSELR---REIARY 223
>gi|451942318|ref|YP_007462955.1| GTPase EngB [Bartonella vinsonii subsp. berkhoffii str. Winnie]
gi|451901705|gb|AGF76167.1| GTPase EngB [Bartonella vinsonii subsp. berkhoffii str. Winnie]
Length = 215
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 114/188 (60%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYFVPDGFSGQAGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW +L+ Y+ R +LKRV +LID++ G+K D +++
Sbjct: 87 PPIALVDMPGYGFAKAPKNLVDAWTQLIFSYLRGRTTLKRVYVLIDSRHGIKKNDSDVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ++LTK+D + + + + + L + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIILTKSDKIKSNILEKLTITTKTQLLKRPAAYPELLVTSSEKAFGLEELR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQAIA 214
>gi|395793072|ref|ZP_10472481.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella vinsonii
subsp. arupensis Pm136co]
gi|423713615|ref|ZP_17687875.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395422242|gb|EJF88450.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395431910|gb|EJF97916.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella vinsonii
subsp. arupensis Pm136co]
Length = 215
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 114/188 (60%), Gaps = 10/188 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F + G
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYFVPDGFSGQQGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + + DAW +L+ Y+ R +LKRV +LID++ G+K D +++
Sbjct: 87 PPVALVDMPGYGFAKAPKNLVDAWTQLIFSYLRGRTTLKRVYVLIDSRHGIKKNDSDVLD 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK+D + + + + + L + +++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKSDKIKSNVLEKLILTTKTQLLKRPAAYPELLVTSSEKAFGLEELR 206
Query: 187 -TVLSKIA 193
+L IA
Sbjct: 207 AAILQAIA 214
>gi|329848428|ref|ZP_08263456.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis
biprosthecum C19]
gi|328843491|gb|EGF93060.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis
biprosthecum C19]
Length = 215
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 1/186 (0%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
AAKV P PE+AFAGRSNVGKSS++NA+ + R S++PG T+ +NFF +
Sbjct: 26 MGAAKVEQ-LPDTSQPEVAFAGRSNVGKSSLINAVVGMKALARASNEPGRTREVNFFNVN 84
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+L LVDLPGYG+A A + ++ L ++Y+ R +LKR LLID + G+K D E +
Sbjct: 85 GQLHLVDLPGYGWAKASKVTVKKFQNLGRDYLRGRPNLKRAYLLIDARHGLKEVDKEPMD 144
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
++ + YQ+VLTK D + P ++A+ + +K + V+ SS++G GI LR
Sbjct: 145 ALDVAAVSYQIVLTKADKIKPAELAKVIEATQAGVKKRPAAHPLVLATSSETGFGIAELR 204
Query: 187 TVLSKI 192
+ ++
Sbjct: 205 AEIMRV 210
>gi|301057780|ref|ZP_07198849.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium
NaphS2]
gi|300448091|gb|EFK11787.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium
NaphS2]
Length = 198
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 2/182 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF +A +P D PE+AFAG+SNVGKSS++N LT + + RTS PG TQ INFF
Sbjct: 3 VEFIKSAFKEEHYPPSDRPEVAFAGKSNVGKSSLINTLTGRRKLARTSSTPGRTQAINFF 62
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ G L LVDLPGYGFA +VK +W +V++Y+ +R +LK V +++D + D +
Sbjct: 63 RFGKTLYLVDLPGYGFARVPMKVKKSWGLMVEDYLRSRQTLKAVVVILDIRRDPSAGDAD 122
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
LI+ + VVLTK D V +R +I++SLK S PV+ SS + G+
Sbjct: 123 LINWLNYYHIVPIVVLTKADKVSRQQAGKRTARIKKSLKG-VSFSAPVLF-SSHTRQGVE 180
Query: 184 SL 185
L
Sbjct: 181 DL 182
>gi|68074349|ref|XP_679089.1| GTP-binding protein [Plasmodium berghei strain ANKA]
gi|56499746|emb|CAH95019.1| probable GTP-binding protein engb, putative [Plasmodium berghei]
Length = 926
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 19 PDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK--LCLVDLPG 76
P PEIAF GRSN GKS+++N L + + S PG T+ I+F+K+G LCLVDLPG
Sbjct: 109 PKYPEIAFIGRSNSGKSTLINELCGRTNKAKVSKMPGCTKQIHFYKIGKPCLLCLVDLPG 168
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YGFA++KEE++ W E Y+ R +LK+V +LID + G+K D EL +R KYQ
Sbjct: 169 YGFAHSKEELRLQWNEFTLFYLKNRTNLKKVFVLIDCRIGLKTSDKELFHFFDRYNIKYQ 228
Query: 137 VVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+VL+K D + D+A + + E + +L + ++ +SS + LR ++K
Sbjct: 229 IVLSKCDLLNTKDLAIKIQIMNEEILHFKNLEKNIISLSSLKRQNLNELRNEIAK 283
>gi|307943176|ref|ZP_07658521.1| ribosome biogenesis GTP-binding protein YsxC [Roseibium sp.
TrichSKD4]
gi|307773972|gb|EFO33188.1| ribosome biogenesis GTP-binding protein YsxC [Roseibium sp.
TrichSKD4]
Length = 215
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL-GTKLCLVDLPGYGFAY 81
EIAFAGRSNVGKSS++NALT + G+ RTS PG TQ +NFF T + +VD+PGYG+A
Sbjct: 42 EIAFAGRSNVGKSSLINALTGRKGLARTSSTPGRTQMLNFFHAPDTPITIVDMPGYGYAQ 101
Query: 82 AKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTK 141
A + + DAW +LV Y+ R +L+RV LLID++ G+K D E + L++++ YQVVLTK
Sbjct: 102 APKGLVDAWTKLVFSYLRGRPNLRRVFLLIDSRHGLKKNDLETMDLLDKAAVVYQVVLTK 161
Query: 142 TDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARF 195
+D + +A+ + +L + ++ SS+ I L+ ++I+RF
Sbjct: 162 SDKIKKPQLAKLLTDTQTALAKRIAAYPEIIATSSEKDLCIDLLK---AEISRF 212
>gi|402819875|ref|ZP_10869442.1| engB protein [alpha proteobacterium IMCC14465]
gi|402510618|gb|EJW20880.1| engB protein [alpha proteobacterium IMCC14465]
Length = 237
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 14/198 (7%)
Query: 13 SSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL------- 65
+ P DL EIAFAGRSNVGKSS++NALT + RTS PG TQ +NFF L
Sbjct: 38 TDGLPNGDLTEIAFAGRSNVGKSSLINALTGHKALARTSSTPGRTQELNFFALAERDETN 97
Query: 66 ---GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A + AW +L++ Y+ R++L+RV +LID + G+K D
Sbjct: 98 NEAGQALWMVDMPGYGYAKESKNKIAAWNKLLRSYLRGRMNLRRVFVLIDARHGIKSNDF 157
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRA-MQIEESLKANNSLVQPVMMVSSK-SGA 180
+++ L++ + YQ+VLTK D P A A + ++ A P M+ +S G
Sbjct: 158 DILKLLDEAAVSYQIVLTKADK--PKQAALEATLATMQTALAKRPAAHPEMIATSAVKGQ 215
Query: 181 GIRSLRTVLSKIARFAKV 198
GI LR ++ + + +
Sbjct: 216 GINLLRAEIAGLVDLSAI 233
>gi|75677252|ref|YP_319673.1| ribosome biogenesis GTP-binding protein YsxC [Nitrobacter
winogradskyi Nb-255]
gi|119369225|sp|Q3SN20.1|ENGB_NITWN RecName: Full=Probable GTP-binding protein EngB
gi|74422122|gb|ABA06321.1| GTPase [Nitrobacter winogradskyi Nb-255]
Length = 217
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 113/190 (59%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P E+AFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 QFIWASPSIETLPPMSGLEVAFAGRSNVGKSSLINALTGRSALARTSRTPGRTQELIFFE 81
Query: 65 --LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G + LVD+PGYGFA A + +W L+ +++ R +L RV +LID + G+K D
Sbjct: 82 GPKGVDVRLVDMPGYGFASAPKARIASWTSLIHQFLLGRATLARVYVLIDARHGIKDIDK 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++ ++RS YQVVLTK D V ++A R L ++ + V++ SS++G GI
Sbjct: 142 TVLGALDRSAVSYQVVLTKADEVKVTEMAERIDITRTQLASHPAAFPDVLVTSSRTGNGI 201
Query: 183 RSLRTVLSKI 192
LR ++++
Sbjct: 202 PELRAAMARL 211
>gi|395785733|ref|ZP_10465461.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella tamiae
Th239]
gi|423717372|ref|ZP_17691562.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella tamiae
Th307]
gi|395424191|gb|EJF90378.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella tamiae
Th239]
gi|395427587|gb|EJF93678.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella tamiae
Th307]
Length = 215
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--------- 66
P PEIAFAGRSNVGKSS++NA+ G+ RTS+ PG TQ +N+F
Sbjct: 27 LPPEGPPEIAFAGRSNVGKSSLINAILGHKGLARTSNTPGRTQELNYFVPDGYSGVEGDL 86
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ LVD+PGYGFA A + DAW LV +Y+ R +LKRV +LID++ G+K D ++++
Sbjct: 87 PPMALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDSRHGIKKNDSDVLN 146
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTK D + P+ +++ + + ++ SS+ G+ LR
Sbjct: 147 LLDKAAVSYQIVLTKGDKIKPLQLSKLLETTRSGVLKRPASYPELLATSSEKKMGLDQLR 206
Query: 187 TVL 189
+
Sbjct: 207 AAI 209
>gi|414165115|ref|ZP_11421362.1| ribosome biogenesis GTP-binding protein YsxC [Afipia felis ATCC
53690]
gi|410882895|gb|EKS30735.1| ribosome biogenesis GTP-binding protein YsxC [Afipia felis ATCC
53690]
Length = 221
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 7/197 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+FF A+ + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FFK
Sbjct: 22 QFFWASPSIETLPPMQGVEIAFAGRSNVGKSSLINALTNRNALARTSHTPGRTQELIFFK 81
Query: 65 -------LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
+L LVD+PGYG+A A + +W +L+ ++ R +L RV +LID++ G
Sbjct: 82 GPGPLDERTPELRLVDMPGYGYASAPKTQIASWTKLIHSFLHGRANLARVYVLIDSRHGF 141
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
K D+E+++ ++++ YQ+VLTKTD V + + + L+ + + +++ SS+
Sbjct: 142 KDADNEVLTTLDKAAVSYQIVLTKTDQVKKAALDETMATMADKLRKHPAAFPELLVTSSR 201
Query: 178 SGAGIRSLRTVLSKIAR 194
G G+ +R + K+ R
Sbjct: 202 DGGGMAEMRAAIVKLLR 218
>gi|221059611|ref|XP_002260451.1| probable GTP-binding protein [Plasmodium knowlesi strain H]
gi|193810524|emb|CAQ41718.1| probable GTP-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 965
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
++ + A S P P PEIAF GRSN GKS+++N L + + S PG T+ I+F
Sbjct: 110 RMILYKTAIQVSELPLPKYPEIAFIGRSNSGKSTLINELCGRTNKAKVSKLPGCTKEIHF 169
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
+K+ LCLVDLPGYGFA++KEE++ W E Y+ R +LK+V +LID + G+K
Sbjct: 170 YKIAKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRKNLKKVFVLIDCRVGLKTS 229
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D EL+ +R KYQ+V +K D + D+A + E + +L P++ +SS
Sbjct: 230 DKELLHFFDRYNIKYQIVFSKCDLLNTKDLAVKIQIANEEIACFKNLEAPIIPLSSLKRQ 289
Query: 181 GIRSLRTVLSKIARF 195
+ LR +IAR+
Sbjct: 290 NLNELR---KEIARY 301
>gi|301099279|ref|XP_002898731.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104804|gb|EEY62856.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 272
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK----- 68
+ P D+PEIAFAGRSN GKSS++NALTRQ G+VRTS PG TQ ++F +G K
Sbjct: 103 NDLPDWDVPEIAFAGRSNAGKSSLINALTRQKGLVRTSKTPGRTQQLHFLSVGGKKGSLP 162
Query: 69 -LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTR--VSLKRVCLLIDTKWGVKPRDHELI 125
L LVD+PG+GFA A ++V D W LV Y+ R +LK LLID + G+ P DH+ +
Sbjct: 163 ELSLVDMPGFGFATAPKKVVDEWHTLVGGYIDNRRGNNLKTTMLLIDARRGLGPADHDFM 222
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEE 159
+ YQVV TK D V D+ ++ + ++
Sbjct: 223 DFLHDLGALYQVVFTKADAVSRGDLEKQIHKAQD 256
>gi|209886641|ref|YP_002290498.1| ribosome biogenesis GTP-binding protein YsxC [Oligotropha
carboxidovorans OM5]
gi|337739846|ref|YP_004631574.1| GTP-binding protein [Oligotropha carboxidovorans OM5]
gi|386028864|ref|YP_005949639.1| GTP-binding protein, putative EngB [Oligotropha carboxidovorans
OM4]
gi|229813297|sp|B6JJN9.1|ENGB_OLICO RecName: Full=Probable GTP-binding protein EngB
gi|209874837|gb|ACI94633.1| GTP-binding protein [Oligotropha carboxidovorans OM5]
gi|336093932|gb|AEI01758.1| GTP-binding protein, putative EngB [Oligotropha carboxidovorans
OM4]
gi|336097510|gb|AEI05333.1| GTP-binding protein, putative EngB [Oligotropha carboxidovorans
OM5]
Length = 221
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 7/197 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+FF A+ + P EIA AGRSNVGKSS++NALT + + RTS PG TQ + FFK
Sbjct: 22 QFFWASPSIETLPPMQGIEIALAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFK 81
Query: 65 -------LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
+L LVD+PGYG+A A + +W L+ Y+ R +L RV +LID++ G
Sbjct: 82 GPGPLDAQTPELRLVDMPGYGYASAPKTKIASWTTLIHRYLLGRANLARVYVLIDSRHGF 141
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
K D E+++ +++S YQ+VLTKTD V + + E L+ + + +++ SS+
Sbjct: 142 KDADDEVLTTLDKSAVSYQIVLTKTDQVKKSALDETMAAMAEKLRKHPAAYPEMLVTSSR 201
Query: 178 SGAGIRSLRTVLSKIAR 194
GAG+ +R + K+ R
Sbjct: 202 DGAGMAEMRAAIVKLLR 218
>gi|338708462|ref|YP_004662663.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
gi|336295266|gb|AEI38373.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 212
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A P +PE+AFAGRSNVGKSS++NALT + + R S PG TQ +NFF
Sbjct: 20 VNFLKSAPALEFLPDASVPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFF 79
Query: 64 KLGTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
+G L LVD+PGYGFA A +++ W+ L+ +Y+ R L+R +L+D++ G+K D
Sbjct: 80 DVGEPLQMRLVDMPGYGFAKAPKDMVKRWKWLINDYLRGRAVLRRTLILVDSRHGLKDVD 139
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
EL+ +++ + Y++VLTK+D + + + I ++ + + +++ SS+ G
Sbjct: 140 RELMKMLDDAAISYRMVLTKSDKIKAEALKKVTDAITTEIRQHPAAFPEIIITSSEKNTG 199
Query: 182 IRSLRTVL 189
+ LR +
Sbjct: 200 LPELRAAV 207
>gi|357383145|ref|YP_004897869.1| GTP-binding protein EngB [Pelagibacterium halotolerans B2]
gi|351591782|gb|AEQ50119.1| GTP-binding protein EngB [Pelagibacterium halotolerans B2]
Length = 209
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL-GTKLCLV 72
S PA D+ EIAFAGRSNVGKSS++NAL Q + RTS+ PG TQ +N F + LV
Sbjct: 26 SDLPADDVVEIAFAGRSNVGKSSLINALVGQSALARTSNTPGRTQELNLFAPEAGGIRLV 85
Query: 73 DLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQ 132
D+PGYGFA A + + W +L+ +++ R +L+RV +L+D + G KP D +++ ++R+
Sbjct: 86 DMPGYGFAKAPKPAVEKWNKLIHQFLRGRPNLRRVYVLVDARHGPKPNDATVMNELDRAA 145
Query: 133 TKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
YQVVLTK D + D+ + + + +++ SS+ G GI +LR
Sbjct: 146 VSYQVVLTKADKLSEKDLDGVVAATAKFIAKRPAAHPEIIVTSSEKGLGIDTLR 199
>gi|92119159|ref|YP_578888.1| ribosome biogenesis GTP-binding protein YsxC [Nitrobacter
hamburgensis X14]
gi|119369222|sp|Q1QH69.1|ENGB_NITHX RecName: Full=Probable GTP-binding protein EngB
gi|91802053|gb|ABE64428.1| GTP-binding protein [Nitrobacter hamburgensis X14]
Length = 217
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 115/191 (60%), Gaps = 4/191 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P E+AFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 QFIWASPSIETLPPMAGVEVAFAGRSNVGKSSLINALTGRGTLARTSRTPGRTQELIFFE 81
Query: 65 LGTK---LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
G K + LVD+PGYGFA A + +W L+ +++ R SL RV +LID++ G+K D
Sbjct: 82 -GPKDADVRLVDMPGYGFASAPKARIASWTSLIHKFLLGRASLARVYVLIDSRHGIKDID 140
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ ++RS YQ+VLTK D V ++A R L + + V++ SS++G G
Sbjct: 141 QAILTTLDRSAVSYQIVLTKADEVKATEMAERTEATRTLLAKHPAAFPDVLVTSSRTGYG 200
Query: 182 IRSLRTVLSKI 192
+ LR ++++
Sbjct: 201 VPELRAAMARL 211
>gi|412993992|emb|CCO14503.1| ribosome biogenesis GTP-binding protein YsxC [Bathycoccus prasinos]
Length = 568
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 108/167 (64%), Gaps = 2/167 (1%)
Query: 20 DLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
++PE+AF GRSNVGKSS++NA+T R+SD PG T+++NF+ + ++L +VDLPGYGF
Sbjct: 298 EVPEVAFCGRSNVGKSSLINAITLS-AAARSSDTPGKTKSLNFYDIDSRLRVVDLPGYGF 356
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMER-SQTKYQVV 138
A+A E + + W L+ EY++TR +LK + ++ID++ G K D E++S + + + VV
Sbjct: 357 AFADESMVETWNRLMDEYLTTRPNLKCIFVVIDSRHGPKKSDREMLSYLSKYGKVPVHVV 416
Query: 139 LTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
L KTD V ++ +R +E LK + + S+ +GAG +L
Sbjct: 417 LNKTDMVRTEELCKRMFLLERELKFIKRSSNVLKLASASTGAGCTAL 463
>gi|383481079|ref|YP_005389994.1| GTP-binding protein YsxC [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378933418|gb|AFC71921.1| GTP-binding protein YsxC [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 212
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGCTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VSS+S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLNDEAQNFLATLNYSCNVMYVSSRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|165932710|ref|YP_001649499.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Iowa]
gi|165907797|gb|ABY72093.1| GTP-binding protein [Rickettsia rickettsii str. Iowa]
Length = 225
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ G T+ INFF
Sbjct: 36 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFN 95
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 96 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 155
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VS++S G R
Sbjct: 156 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGAR 211
Query: 184 SLRTVLSKIARFAK 197
L+ L+K +F K
Sbjct: 212 ELKASLAKCIKFQK 225
>gi|290981580|ref|XP_002673508.1| predicted protein [Naegleria gruberi]
gi|284087092|gb|EFC40764.1| predicted protein [Naegleria gruberi]
Length = 441
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 111/171 (64%), Gaps = 5/171 (2%)
Query: 21 LPEIAFAGRSNVGKSSMLNAL---TRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGY 77
LP+I FAGRSNVGKSS++NAL T + G S KPG TQ++N ++L + +VDLPGY
Sbjct: 182 LPKIVFAGRSNVGKSSLINALVTKTGKGGKAAVSSKPGETQSLNCYQLSDAINIVDLPGY 241
Query: 78 GFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQV 137
GFA+A+EE + W+E ++ ++ T L+RV +LID + G K D+ ++ + +++ K Q+
Sbjct: 242 GFAFAEEEKRLEWQEQIRNFLLTASKLRRVFILIDARHGFKETDYSFLTFLNQNKIKNQI 301
Query: 138 VLTKTDTVFPIDVARRAMQIEESLKAN--NSLVQPVMMVSSKSGAGIRSLR 186
+LTK D ++ ++A++ + ++ N + +++VSSK GI+ ++
Sbjct: 302 ILTKCDLLYDDEIAKQYEYLINQIRVRPFNHTCEEMIVVSSKKMNGIKEIQ 352
>gi|157828012|ref|YP_001494254.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia rickettsii
str. 'Sheila Smith']
gi|378720812|ref|YP_005285699.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Colombia]
gi|378722166|ref|YP_005287052.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Arizona]
gi|378723524|ref|YP_005288408.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Hauke]
gi|379016926|ref|YP_005293161.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Brazil]
gi|379017312|ref|YP_005293546.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Hino]
gi|166225976|sp|A8GQS1.1|ENGB_RICRS RecName: Full=Probable GTP-binding protein EngB
gi|157800493|gb|ABV75746.1| GTPase EngB [Rickettsia rickettsii str. 'Sheila Smith']
gi|376325450|gb|AFB22690.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Brazil]
gi|376325836|gb|AFB23075.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Colombia]
gi|376327190|gb|AFB24428.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Arizona]
gi|376329877|gb|AFB27113.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Hino]
gi|376332539|gb|AFB29772.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Hauke]
Length = 212
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ G T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VS++S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGAR 198
Query: 184 SLRTVLSKIARFAK 197
L+ L+K +F K
Sbjct: 199 ELKASLAKCIKFQK 212
>gi|239947151|ref|ZP_04698904.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921427|gb|EER21451.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 212
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A + P LPEIAF G+SNVGKS ++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGVMNINQIPNFSLPEIAFVGKSNVGKSRLINMICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ WE L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VSS+S G+R
Sbjct: 143 AELLLANKREFQIIFTKSDKV----TDHKNLNDEAQNFLATLNYSCNVMYVSSRSKEGVR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|424873440|ref|ZP_18297102.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393169141|gb|EJC69188.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 217
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 119/195 (61%), Gaps = 10/195 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GGDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQ+VLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQIVLTKTDKIKAAGVPKLIAETAEKIRKRPAAYPGVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFAK 197
LR +++ A+
Sbjct: 201 DELRQAIAETVGIAR 215
>gi|116250221|ref|YP_766059.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium
leguminosarum bv. viciae 3841]
gi|119369242|sp|Q1MM59.1|ENGB_RHIL3 RecName: Full=Probable GTP-binding protein EngB
gi|115254869|emb|CAK05943.1| putative GTP-binding protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 217
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 119/195 (61%), Gaps = 10/195 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GGDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQ+VLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQIVLTKTDKIKAAGVPKLLAETAEKIRKRPAAYPGVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFAK 197
LR +++ A+
Sbjct: 201 DELRQAIAETVGIAR 215
>gi|241202848|ref|YP_002973944.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240856738|gb|ACS54405.1| GTP-binding protein HSR1-related [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 217
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 119/195 (61%), Gaps = 10/195 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GQDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQ+VLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQIVLTKTDKIKAAGVPKLLAETAEKIRKRPAAYPGVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFAK 197
LR +++ A+
Sbjct: 201 DELRQAIAETVGIAR 215
>gi|402490547|ref|ZP_10837336.1| GTP-binding protein YsxC [Rhizobium sp. CCGE 510]
gi|401810573|gb|EJT02946.1| GTP-binding protein YsxC [Rhizobium sp. CCGE 510]
Length = 217
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 119/195 (61%), Gaps = 10/195 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGFSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E+ D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GQDLPPMAIVDMPGYGYAQAPKEMVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQ+VLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQIVLTKTDKIKAPAVPKLLAETAEKIRKRPAAYPGVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFAK 197
LR + + A+
Sbjct: 201 DDLRQAIGETVGIAR 215
>gi|424898046|ref|ZP_18321620.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182273|gb|EJC82312.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 217
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 119/194 (61%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E+ D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GQDLPPMAIVDMPGYGYAQAPKELVDNWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQVVLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQVVLTKTDKIKAPAVPKLLAETAEKIRKRPAAYPGVLSTSSEKGDGM 200
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 201 DELRQAIAETVGIA 214
>gi|431806668|ref|YP_007233569.1| GTP-binding protein EngB [Liberibacter crescens BT-1]
gi|430800643|gb|AGA65314.1| GTP-binding protein EngB [Liberibacter crescens BT-1]
Length = 213
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 109/193 (56%), Gaps = 9/193 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-- 63
F S P PEIAF GRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 15 FLKGVPEISLLPQSGPPEIAFIGRSNVGKSSLINALINQKGLARTSNVPGRTQELNYFIP 74
Query: 64 -------KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
L +VD+PGYG+ A +E + W++L+ +Y R +LKRV LLID++ G
Sbjct: 75 SGYLENNNEFPPLAIVDMPGYGYMEAPKEKANVWKKLIFQYFYIRSTLKRVYLLIDSRHG 134
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+K D + L++++ YQV+LTK D + + + + ++++ + + V+ SS
Sbjct: 135 IKKNDKDTFLLLDKAAISYQVILTKIDKIDKVSIQDILEKTQKAILKHPASYPFVLATSS 194
Query: 177 KSGAGIRSLRTVL 189
+G G+ LR +
Sbjct: 195 GTGKGLEILRNAI 207
>gi|34580908|ref|ZP_00142388.1| hypothetical GTP-binding protein [Rickettsia sibirica 246]
gi|374318881|ref|YP_005065379.1| putative GTP-binding protein [Rickettsia slovaca 13-B]
gi|383750778|ref|YP_005425879.1| GTP-binding protein YsxC [Rickettsia slovaca str. D-CWPP]
gi|28262293|gb|EAA25797.1| hypothetical GTP-binding protein [Rickettsia sibirica 246]
gi|360041429|gb|AEV91811.1| putative GTP-binding protein [Rickettsia slovaca 13-B]
gi|379773792|gb|AFD19148.1| GTP-binding protein YsxC [Rickettsia slovaca str. D-CWPP]
Length = 212
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VS++S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|325180055|emb|CCA14457.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 318
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 113/189 (59%), Gaps = 12/189 (6%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S PA ++PE+AFAGRSN GKSS++NA+ Q G+VRTS PG TQ +NFF +G K
Sbjct: 116 SASDPSDLPAWNIPEVAFAGRSNCGKSSLINAILGQPGLVRTSKTPGRTQLLNFFSVGGK 175
Query: 69 ------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVS--LKRVCLLIDTKWGVKPR 120
+ +VD+PGYGFA ++V D W++LV Y+ R + LK + +L+D + G+
Sbjct: 176 KGSLPAMSVVDMPGYGFAKPPKDVVDTWDKLVGGYIERRQAGLLKNLFVLLDARRGITTL 235
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVA---RRAMQIEESLKANNSLVQPVMMVSSK 177
D E + +E ++ YQ++ TK D V ++ R + ++E L + + V+ S+K
Sbjct: 236 DQEFLDFLEEMESLYQIIFTKIDAVPTAELEKNIREVLNMKE-LFSRRGMNPIVLATSTK 294
Query: 178 SGAGIRSLR 186
GIR ++
Sbjct: 295 ESFGIRQMQ 303
>gi|395790701|ref|ZP_10470161.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella alsatica
IBS 382]
gi|395409453|gb|EJF76043.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella alsatica
IBS 382]
Length = 215
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 10/198 (5%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-- 63
F S P PEIAF GRSNVGKSS++NAL +Q + R S+ PG TQ +NFF
Sbjct: 17 FIRGVPAISFLPPEGPPEIAFVGRSNVGKSSLINALVQQKNLARISNTPGRTQELNFFIP 76
Query: 64 -----KLGT--KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
+ G + L+D+PGYGFA A + + D W L+ Y+ R +LKRV +LID++ G
Sbjct: 77 DGFSGQPGDLPPIALIDMPGYGFAEAPKNLVDTWTNLIFSYLRGRTTLKRVYILIDSRHG 136
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+K D +++ L+++ YQ+V TK+D + D+ + + L + +++ SS
Sbjct: 137 IKKNDADILDLLDKVAVSYQIVFTKSDKIKSNDLEKLIITTRTKLLKRPAAYPELLVTSS 196
Query: 177 KSGAGIRSLR-TVLSKIA 193
+ G+ LR +L IA
Sbjct: 197 EKTFGLEELRAAILQTIA 214
>gi|348678408|gb|EGZ18225.1| hypothetical protein PHYSODRAFT_383431 [Phytophthora sojae]
Length = 233
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 87/140 (62%), Gaps = 8/140 (5%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK----- 68
+ P D+PEIAFAGRSN GKSS++NALT Q +VRTS PG TQ ++F +G K
Sbjct: 68 TDLPQWDVPEIAFAGRSNAGKSSLINALTGQKSLVRTSKTPGRTQQLHFLSVGGKKGSLP 127
Query: 69 -LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTR--VSLKRVCLLIDTKWGVKPRDHELI 125
L LVD+PG+GFA A ++V D W LV YV R +LK LLID + G+ P DH+ +
Sbjct: 128 DLALVDMPGFGFAAAPKKVVDEWHALVGGYVEGRRGNNLKTTMLLIDARRGLGPADHDFM 187
Query: 126 SLMERSQTKYQVVLTKTDTV 145
+ YQVV TK DTV
Sbjct: 188 DFLHDLGALYQVVFTKADTV 207
>gi|414153437|ref|ZP_11409763.1| putative GTP-binding protein EngB [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455116|emb|CCO07666.1| putative GTP-binding protein EngB [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 204
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 6/187 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPEIAF GRSNVGKSS++N L + G+ RTS PG TQ INFFK
Sbjct: 7 EFLTSAVNPGGYPPGDLPEIAFVGRSNVGKSSLINRLVNRKGLARTSSTPGRTQLINFFK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + +VDLPGYG+A EEVK W ++++ Y+ R +L+ VCLL+D + +D ++
Sbjct: 67 INDRFIMVDLPGYGYARVPEEVKARWGKMIEGYLKNRENLRGVCLLLDCRHTPTAQDIQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEE--SLKANNSLVQPVMMVSSKSGAGI 182
++ + VV TK D + A++ I++ SL +SL+ S+++G G
Sbjct: 127 YRWLQYYRLPAAVVATKADKLSNNQWAKQQSVIKKTLSLAPEHSLI----AFSAETGRGR 182
Query: 183 RSLRTVL 189
L V+
Sbjct: 183 DELLDVI 189
>gi|424888898|ref|ZP_18312501.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393174447|gb|EJC74491.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 217
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 119/194 (61%), Gaps = 10/194 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E+ D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GQDLPPMAIVDMPGYGYAQAPKELVDNWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQ+VLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQIVLTKTDKIKAPAVPKLLAETAEKIRKRPAAYPGVLSTSSEKGDGM 200
Query: 183 RSLRTVLSKIARFA 196
LR +++ A
Sbjct: 201 DELRQAIAETVGIA 214
>gi|294866649|ref|XP_002764793.1| multidrug resistance protein, putative [Perkinsus marinus ATCC 50983]
gi|239864540|gb|EEQ97510.1| multidrug resistance protein, putative [Perkinsus marinus ATCC 50983]
Length = 2239
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 113/181 (62%), Gaps = 6/181 (3%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALT-RQWGVVRTSDKPGLTQTINFFKLGTK--LCLV 72
P P LPE+A GRSN GKS+++N L RQ +TS PG T+++ F+K+G L LV
Sbjct: 1515 IPPPVLPEVAVVGRSNCGKSTLVNTLAGRQ--NSKTSKIPGSTESLLFWKMGKPPVLMLV 1572
Query: 73 DLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQ 132
DLPGYGFAY EE + W EL Y+S R +LKRV +L+D + G+ D E+IS +ER
Sbjct: 1573 DLPGYGFAYQGEEKRTEWTELSLFYLSHRSNLKRVLVLVDARRGLMQSDREMISFLERYG 1632
Query: 133 TKYQVVLTKTDTVFPIDVARRAMQIEESLKAN-NSLVQPVMMVSSKSGAGIRSLRTVLSK 191
K+QV++TK D + P +A+R + +++ L V P++ +S+ + G+ LR VL+
Sbjct: 1633 VKWQVIVTKCDLLKPRFLAKRLVIMQQILDTEFKGSVGPMIPLSALAKQGVDELRIVLNS 1692
Query: 192 I 192
+
Sbjct: 1693 M 1693
>gi|229586341|ref|YP_002844842.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia africae
ESF-5]
gi|383483480|ref|YP_005392393.1| GTP-binding protein YsxC [Rickettsia parkeri str. Portsmouth]
gi|259645905|sp|C3PMD9.1|ENGB_RICAE RecName: Full=Probable GTP-binding protein EngB
gi|228021391|gb|ACP53099.1| Hypothetical GTP-binding protein [Rickettsia africae ESF-5]
gi|378935834|gb|AFC74334.1| GTP-binding protein YsxC [Rickettsia parkeri str. Portsmouth]
Length = 212
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICSNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VS++S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|383482947|ref|YP_005391861.1| GTP-binding protein YsxC [Rickettsia montanensis str. OSU 85-930]
gi|378935301|gb|AFC73802.1| GTP-binding protein YsxC [Rickettsia montanensis str. OSU 85-930]
Length = 212
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + ++ E ++ A + V+ VSS+S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----MDHKNLKDEAQNFLATLNYSCNVVYVSSRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|402704075|ref|ZP_10852054.1| GTP-binding protein YsxC [Rickettsia helvetica C9P9]
Length = 212
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W+ L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWKVLISYYLRNSHNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + V+ VSS+S G R
Sbjct: 143 AELLLANKREFQIIFTKSDKV----TDHKNLNDEAQNFLATLNYSCNVIYVSSRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|424879797|ref|ZP_18303429.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392516160|gb|EIW40892.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 217
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 119/195 (61%), Gaps = 10/195 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GQDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQ+VLTKTD + + + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQIVLTKTDKIKAAGLPKLLAETAEKIRKRPAAYPGVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFAK 197
LR +++ A+
Sbjct: 201 DELRQAIAETVGIAR 215
>gi|194430709|ref|ZP_03063138.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B171]
gi|194411246|gb|EDX27639.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B171]
Length = 197
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF + P P+ PEIAF GRSNVGKSS++NA + V + S PG T+ +NFF
Sbjct: 5 IEFVKSVFKLEDLPPPEFPEIAFLGRSNVGKSSLINAFLNRKKVAKVSSTPGFTKALNFF 64
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
++ K LVDLPGYGFA EVK W+ LV+ Y+ + + L+ D + D +
Sbjct: 65 RIDFKFYLVDLPGYGFAKVPVEVKKHWQYLVEGYLKAVRDFRNLVLIFDIRRNPDEADIQ 124
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ + + +VL K DT+ +V R+A +++ K N P+ ++S K GI
Sbjct: 125 LVEFVKHLKKPHCIVLNKIDTLSFREVERQASVYQKTFKPNPE--TPLFLISCKESKGIP 182
Query: 184 SLRTVL 189
LR+ L
Sbjct: 183 QLRSHL 188
>gi|319406773|emb|CBI80406.1| GTP-binding protein [Bartonella sp. 1-1C]
Length = 213
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 111/184 (60%), Gaps = 11/184 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG--------- 66
P PEIAFAGRSNVGKSS++NAL +Q + RTS+ PG TQ +N+F
Sbjct: 26 LPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYFIPDGFNEQTHNL 85
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ VD+PGYGFA A + + +AW L+ +Y+ R +LKRV +LID++ G+K D + ++
Sbjct: 86 PPVAFVDMPGYGFAKAPKNLVNAWTHLIFDYLRGRTTLKRVYVLIDSRHGIKKNDTDTLN 145
Query: 127 LMERSQTKYQVVLTKTDTV-FPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
L++++ YQ+VLTK+D + F A M + LK + + +++ S++ +G+ L
Sbjct: 146 LLDKAAVSYQIVLTKSDKIKFNTLEALITMTKTKLLKHPAAYPE-ILVTSAEKASGLEEL 204
Query: 186 RTVL 189
R +
Sbjct: 205 RAAI 208
>gi|404495322|ref|YP_006719428.1| GTP-binding protein YsxC [Geobacter metallireducens GS-15]
gi|418067208|ref|ZP_12704557.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
metallireducens RCH3]
gi|119369199|sp|Q39YG6.1|ENGB_GEOMG RecName: Full=Probable GTP-binding protein EngB
gi|78192941|gb|ABB30708.1| GTPase EngB [Geobacter metallireducens GS-15]
gi|373559209|gb|EHP85515.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
metallireducens RCH3]
Length = 204
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 94/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + + +P P+LPE+AFAGRSNVGKSS++N L + G+VRTS PG TQ INFF+
Sbjct: 7 EFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQLINFFR 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L LVDLPGYGFA VK W +V+ Y+STR +L V L++D + D +
Sbjct: 67 VNGSLMLVDLPGYGFAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPTEEDQLM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ + VV+TK D V + A++A I +L
Sbjct: 127 LQWLRAYNVAVLVVVTKCDKVSKNERAKQAAIITRTL 163
>gi|339320295|ref|YP_004679990.1| GTPase EngB [Candidatus Midichloria mitochondrii IricVA]
gi|338226420|gb|AEI89304.1| GTPase EngB [Candidatus Midichloria mitochondrii IricVA]
Length = 195
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 110/193 (56%), Gaps = 10/193 (5%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
N+ F +A + P LPEIAF GRSNVGKSS++NA+ + +TS PG TQ I
Sbjct: 3 FNQATFLTSAANLRNLPKTQLPEIAFIGRSNVGKSSLINAIVGNAKIAKTSKTPGRTQQI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFFKL + +VDLPGYG+A A +V W+E EY+ R LK V +LID++ G K
Sbjct: 63 NFFKL-PEFIIVDLPGYGYASAPIKVIQKWQEFNLEYIKNRQQLKLVFILIDSRIGFKEL 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNS---LVQP-VMMVSS 176
D LI + + K +++ TK D + + ++I +S+ N L++P ++ SS
Sbjct: 122 DLNLIEQLNEAGVKCRIIYTKVD-----QLNKSEIEILKSITTFNDRYPLLEPNALIASS 176
Query: 177 KSGAGIRSLRTVL 189
K+ GI +R V+
Sbjct: 177 KNKEGIERIRKVI 189
>gi|341583364|ref|YP_004763855.1| GTP-binding protein YsxC [Rickettsia heilongjiangensis 054]
gi|350273154|ref|YP_004884467.1| GTP-binding protein [Rickettsia japonica YH]
gi|340807590|gb|AEK74178.1| GTP-binding protein YsxC [Rickettsia heilongjiangensis 054]
gi|348592367|dbj|BAK96328.1| GTP-binding protein [Rickettsia japonica YH]
Length = 212
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGVMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VSS+S G R
Sbjct: 143 ADLLFANKREFQIIFTKSDKV----TDHKNLNDEAQNFLATLNYSCNVMYVSSRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|157803283|ref|YP_001491832.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia canadensis
str. McKiel]
gi|166225975|sp|A8EXG4.1|ENGB_RICCK RecName: Full=Probable GTP-binding protein EngB
gi|157784546|gb|ABV73047.1| GTP-binding protein [Rickettsia canadensis str. McKiel]
Length = 219
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T INFF
Sbjct: 25 KFVAGAMNINQIPNFLLPEIAFIGKSNVGKSSLINTICNNKNLAKVSNIPGRTGQINFFN 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ WE L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 85 LADKLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSNNLRLVNLLIDSRRGIKENDKKV 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPI-DVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
L+ +++ +Q++ TK D V ++ A +L + + VM VSS+S G R
Sbjct: 145 AELLLKNKRSFQIIFTKFDKVTDCKNLTDEAQNFLTTLHYSCN----VMYVSSRSKEGAR 200
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 201 ELKASLAK 208
>gi|209547691|ref|YP_002279608.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424915754|ref|ZP_18339118.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|238058987|sp|B5ZN41.1|ENGB_RHILW RecName: Full=Probable GTP-binding protein EngB
gi|209533447|gb|ACI53382.1| GTP-binding protein HSR1-related [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392851930|gb|EJB04451.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 217
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 119/195 (61%), Gaps = 10/195 (5%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------K 64
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F +
Sbjct: 21 SLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 65 LG--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G + +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 SGDMPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDD 140
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ L++++ YQ+VLTKTD + V + + E ++ + V+ SS+ G G+
Sbjct: 141 DVLDLLDKAAVSYQIVLTKTDKIKAPAVPKLLAETAEKIRKRPAAYPGVLSTSSEKGDGL 200
Query: 183 RSLRTVLSKIARFAK 197
LR + + A+
Sbjct: 201 DDLRQAIGETVGVAR 215
>gi|414175556|ref|ZP_11429960.1| ribosome biogenesis GTP-binding protein YsxC [Afipia broomeae ATCC
49717]
gi|410889385|gb|EKS37188.1| ribosome biogenesis GTP-binding protein YsxC [Afipia broomeae ATCC
49717]
Length = 221
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 21/204 (10%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+FF A+ + P E+AFAGRSNVGKSS++NALT + G+ RTS PG TQ + FF+
Sbjct: 22 QFFWASPSIEALPPMKGVEVAFAGRSNVGKSSLINALTGRNGLARTSHTPGRTQELIFFE 81
Query: 65 LGTK-------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
T L LVD+PGYG+A A + +W L+ +++ R +L RV +LID++ G
Sbjct: 82 GPTPADGKDAGLRLVDMPGYGYASAPKAQIASWTSLIHKFLQGRANLARVYVLIDSRHGF 141
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNS--LVQP----- 170
K D++++ +++S YQVVLTK D V + +EE++ A + L P
Sbjct: 142 KDVDNDVLKTLDKSAVSYQVVLTKADQV-------KKAALEETIAATKAALLKHPAAFPE 194
Query: 171 VMMVSSKSGAGIRSLRTVLSKIAR 194
V++ SS++G G+ LR + ++ R
Sbjct: 195 VLVTSSRTGDGMPELRAAMIRLLR 218
>gi|86747808|ref|YP_484304.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris HaA2]
gi|119369244|sp|Q2J2B7.1|ENGB_RHOP2 RecName: Full=Probable GTP-binding protein EngB
gi|86570836|gb|ABD05393.1| GTP-binding [Rhodopseudomonas palustris HaA2]
Length = 216
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F A+ + P D E+AFAGRSNVGKSS++NALT + + RTS PG TQ + FF
Sbjct: 22 HFIWASPSIETLPPMDGLEVAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFD 81
Query: 65 --LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L LVD+PGYG+A A + +W L+ +++ R +L RV +LID + G+K D
Sbjct: 82 GPPGAGLRLVDMPGYGYAAASKAKVASWTSLIHKFLQGRATLARVYVLIDGRHGLKDVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ ++++ YQ+VLTK D V ++A R +L + + ++ SS++GAG+
Sbjct: 142 DILKTLDKAAVSYQIVLTKADQVKAAELAERVDATRTALAKHPAAFPELLTTSSRTGAGM 201
Query: 183 RSLRTVLSKI 192
LR + ++
Sbjct: 202 PELRAAMIRL 211
>gi|383312084|ref|YP_005364885.1| GTP-binding protein YsxC [Candidatus Rickettsia amblyommii str.
GAT-30V]
gi|378930744|gb|AFC69253.1| GTP-binding protein YsxC [Candidatus Rickettsia amblyommii str.
GAT-30V]
Length = 212
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VSS+ G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLNDEAQNFLATLNYSCNVMYVSSRIKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|379018644|ref|YP_005294878.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Hlp#2]
gi|376331224|gb|AFB28458.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Hlp#2]
Length = 212
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ G T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VS++S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGAR 198
Query: 184 SLRTVLSKIARFAK 197
L+ L+K + K
Sbjct: 199 ELKASLAKCIKLQK 212
>gi|262198758|ref|YP_003269967.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum
DSM 14365]
gi|262082105|gb|ACY18074.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum
DSM 14365]
Length = 198
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 8/191 (4%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A S FPAP LPEIAFAGRSNVGKSS++N L G+ RTS PG T+ +N+F+
Sbjct: 7 EFVTSAAKPSQFPAPTLPEIAFAGRSNVGKSSLINTLVDIAGLARTSRTPGRTRLVNWFQ 66
Query: 65 L----GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
+ G + VDLPGYG+A ++ +W L+++Y+S R +L+ + +LID + G +
Sbjct: 67 IVPAKGKPMLFVDLPGYGYAKVPTAMRASWRPLIEDYLSDRATLRALVVLIDARRGAQEE 126
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
+ +L+ + ++ V+TK D + A +I+ L L +P ++ SS SG
Sbjct: 127 EIDLLDWLRSAEVPAITVVTKADKLSKNKRKPAAAEIQRDL----GLRRPPILFSSLSGD 182
Query: 181 GIRSLRTVLSK 191
G+ L +++
Sbjct: 183 GLNDLWQAIAR 193
>gi|51473248|ref|YP_067005.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia typhi str.
Wilmington]
gi|383752022|ref|YP_005427122.1| GTP-binding protein YsxC [Rickettsia typhi str. TH1527]
gi|383842857|ref|YP_005423360.1| GTP-binding protein YsxC [Rickettsia typhi str. B9991CWPP]
gi|81610845|sp|Q68XW9.1|ENGB_RICTY RecName: Full=Probable GTP-binding protein EngB
gi|51459560|gb|AAU03523.1| probable GTP-binding protein EngB [Rickettsia typhi str.
Wilmington]
gi|380758665|gb|AFE53900.1| GTP-binding protein YsxC [Rickettsia typhi str. TH1527]
gi|380759504|gb|AFE54738.1| GTP-binding protein YsxC [Rickettsia typhi str. B9991CWPP]
Length = 214
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEI F G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 25 KFVAGANHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNIPGRTRQINFFN 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL +VDLPGYGFA VK+ WE L+ Y+ +L V LLID++ G+K D ++
Sbjct: 85 IIDKLIIVDLPGYGFANVPISVKEQWEVLITYYLRNSHNLMLVNLLIDSRRGIKENDKKV 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V R+ + E ++ A V+ VSS+S G +
Sbjct: 145 AELLLANKREFQIIFTKSDKV----TDRKNLNYEAQNFLATLHYSCNVIYVSSRSKEGTK 200
Query: 184 SLRTVLSKIARFAK 197
L+ L+K ++ +
Sbjct: 201 ELKASLAKCIKYQR 214
>gi|319408961|emb|CBI82618.1| GTP-binding protein [Bartonella schoenbuchensis R1]
Length = 181
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-- 63
F + P PEIAF GRSNVGKSS++NAL +Q G+ RTS+ PG TQ +N+F
Sbjct: 17 FIRSVPTIQCLPPEGPPEIAFVGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFIP 76
Query: 64 -KLGTK------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
L + + LVD+PGYGFA A +AW L+ +Y+ R +LKR +LID++ G
Sbjct: 77 ENLSDQKEDFPPIALVDMPGYGFAKAPPSCIEAWTRLIFDYLRGRTTLKRAYVLIDSRHG 136
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFP 147
+K D +++ L++++ YQ+VLTK+D + P
Sbjct: 137 IKKNDTDVLDLLDKAAVSYQIVLTKSDKIKP 167
>gi|379711880|ref|YP_005300219.1| GTP-binding protein YsxC [Rickettsia philipii str. 364D]
gi|376328525|gb|AFB25762.1| GTP-binding protein YsxC [Rickettsia philipii str. 364D]
Length = 212
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ G T+ INFF
Sbjct: 23 KFVAGAMNINQVPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VS++S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGAR 198
Query: 184 SLRTVLSKIARFAK 197
L+ L+K + K
Sbjct: 199 ELKASLAKCIKLQK 212
>gi|259046800|ref|ZP_05737201.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
adiacens ATCC 49175]
gi|259036568|gb|EEW37823.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
adiacens ATCC 49175]
Length = 199
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 94/145 (64%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+NK EF +A + +PA DLPEIA +GRSNVGKSS +N L ++ + RTS KPG TQT+
Sbjct: 3 VNKAEFTISAVSPAQYPAGDLPEIALSGRSNVGKSSFINKLIQRKSLARTSSKPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + VD+PGYG+A ++ ++ W ++++EY++TR SL+ V +L+D +
Sbjct: 63 NFYHINELFYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRQSLRLVLILVDFRHEPSQE 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D ++ +E Y++V+TK D +
Sbjct: 123 DVQMREFLEYYNIPYRIVMTKCDKI 147
>gi|116621147|ref|YP_823303.1| small GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|122254883|sp|Q026Q1.1|ENGB_SOLUE RecName: Full=Probable GTP-binding protein EngB
gi|116224309|gb|ABJ83018.1| small GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 191
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF ++ +FP+ LPEIAF GRSNVGKSS++NALT + TS+ PG TQTINF
Sbjct: 5 KAEFVVSSGKPDTFPSDRLPEIAFLGRSNVGKSSLINALTGHKKLAFTSNTPGRTQTINF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+++ K LVDLPGYG+A + W+ L++ Y+ R +LK CL++DT+ G +D
Sbjct: 65 YRVDEKFYLVDLPGYGYARVPAGFAEQWKVLIEHYLEFRETLKFSCLILDTRRGWMEKDL 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA-NNSLVQPVMMVSSKSGAG 181
+L ++ Y VV TKTD + + E L+A V+P + S+ SG G
Sbjct: 125 DLKRWLDHHGRPYLVVATKTDKL-------NQSEQERGLRAIRQEGVEP-LPFSALSGRG 176
Query: 182 IRSL 185
+R +
Sbjct: 177 VREI 180
>gi|379022494|ref|YP_005299155.1| GTP-binding protein YsxC [Rickettsia canadensis str. CA410]
gi|376323432|gb|AFB20673.1| GTP-binding protein YsxC [Rickettsia canadensis str. CA410]
Length = 219
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A A + P LPEIAF G+SNVGKSS++N + + + S+ PG T INFF L
Sbjct: 26 FVAGAMNINQIPNFLLPEIAFIGKSNVGKSSLINTICNNKNLAKVSNIPGRTGQINFFNL 85
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
KL +VDLPGYGFA VK+ W+ L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 86 ADKLIIVDLPGYGFANVPISVKEQWKVLISYYLRNSNNLRLVNLLIDSRRGIKENDKKVA 145
Query: 126 SLMERSQTKYQVVLTKTDTVFPI-DVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
L+ +++ +Q++ TK D V ++ A +L + + VM VSS+S G R
Sbjct: 146 ELLLKNKRSFQIIFTKCDKVTDCKNLTDEAQNFLTTLHYSCN----VMYVSSRSKEGARE 201
Query: 185 LRTVLSK 191
L+ L+K
Sbjct: 202 LKASLAK 208
>gi|86356093|ref|YP_467985.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium etli CFN
42]
gi|119369241|sp|Q2KD28.1|ENGB_RHIEC RecName: Full=Probable GTP-binding protein EngB
gi|86280195|gb|ABC89258.1| GTP-binding protein [Rhizobium etli CFN 42]
Length = 217
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 115/190 (60%), Gaps = 9/190 (4%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF-------KLG-- 66
P PE+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F + G
Sbjct: 25 LPPEGPPEVAFAGRSNVGKSSLINALVSQKGLARTSNTPGRTQELNYFVPDGYSGEAGDL 84
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
+ +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D +++
Sbjct: 85 PPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDDDVLD 144
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
L++++ YQ+VLTKTD + V + + + ++ + ++ SS+ G G+ LR
Sbjct: 145 LLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPYLLSTSSEKGDGLDELR 204
Query: 187 TVLSKIARFA 196
+++ A
Sbjct: 205 QAIAETVGIA 214
>gi|379713214|ref|YP_005301552.1| GTP-binding protein YsxC [Rickettsia massiliae str. AZT80]
gi|376333860|gb|AFB31092.1| GTP-binding protein YsxC [Rickettsia massiliae str. AZT80]
Length = 212
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
L+ ++ ++Q++ TK+D V D +++ L N VM VSS+S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV--TDHKNLNDEVQNFLATLNYSCN-VMYVSSRSKEGARE 199
Query: 185 LRTVLSK 191
L+ L+K
Sbjct: 200 LKASLAK 206
>gi|315122060|ref|YP_004062549.1| GTPase EngB [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495462|gb|ADR52061.1| GTPase EngB [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 192
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 13/182 (7%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF----------KL 65
P PEIAF+GRSNVGKSS++N L + + RTS+ PG TQ INFF L
Sbjct: 4 LPEEGPPEIAFSGRSNVGKSSLINMLLNRKNLARTSNSPGRTQEINFFIPSDCSGRKDNL 63
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
T + LVD+PGYG+A A ++ AW LV Y+ R +L+ V LLID + G+K D ++
Sbjct: 64 PT-MTLVDMPGYGYAKAPKKNVAAWGNLVVRYLRERSTLRCVYLLIDCRHGIKKIDQDVF 122
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGAGIRS 184
+L+++ YQV+LTK D + P +A+ ++ +SL N+ V++ SS G GI
Sbjct: 123 ALLDKEAVSYQVILTKADKLSPA-MAQEKLENTKSLLQNHPAAHSDVILTSSIKGNGIEM 181
Query: 185 LR 186
LR
Sbjct: 182 LR 183
>gi|414168983|ref|ZP_11424820.1| ribosome biogenesis GTP-binding protein YsxC [Afipia clevelandensis
ATCC 49720]
gi|410885742|gb|EKS33555.1| ribosome biogenesis GTP-binding protein YsxC [Afipia clevelandensis
ATCC 49720]
Length = 232
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 7/197 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P E+AFAGRSNVGKSS++NALT + G+ RTS PG TQ + FF
Sbjct: 33 QFIWASPSIETLPPMKGVEVAFAGRSNVGKSSLINALTGRNGLARTSHTPGRTQELIFFD 92
Query: 65 LGTK-------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
T L LVD+PGYG+A A + +W L+ +++ R +L RV +LID + G
Sbjct: 93 GPTPADGKDAGLRLVDMPGYGYASAPKSQIASWTTLIHKFLQGRANLARVYVLIDARHGF 152
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
K D +++ ++RS YQVVLTK D V ++ + +L + + V++ SS+
Sbjct: 153 KDVDKDVLKTLDRSAVSYQVVLTKADQVKKSELENTIAATKAALAKHPAAFPEVLVTSSR 212
Query: 178 SGAGIRSLRTVLSKIAR 194
+G G+ LR + ++ R
Sbjct: 213 TGDGMPELRAAMIRLLR 229
>gi|297569324|ref|YP_003690668.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio
alkaliphilus AHT2]
gi|296925239|gb|ADH86049.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio
alkaliphilus AHT2]
Length = 200
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K+ F + + P DLPEIAFAGRSNVGKSS+LN L R+ +V+ S +PG TQ++
Sbjct: 4 VEKVSFVDSVFSLAQLPVGDLPEIAFAGRSNVGKSSLLNCLLRRKNLVKVSARPGKTQSL 63
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ +G +L LVDLPGYGFA + ++ W+EL+ Y+ TR +L+ V L+ID + +K
Sbjct: 64 NFYLVGDQLHLVDLPGYGFARVDKRLQAKWQELITAYLETRPNLRCVVLIIDLRHALKES 123
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D L ++ + V TK D + R+A ++ +L + + ++ SS SG
Sbjct: 124 DRMLAGWLQAQGIPWLPVYTKKDKLSRNQQQRQARLLDAALGVSP---KDRLLFSSLSGE 180
Query: 181 GIRSL 185
G + L
Sbjct: 181 GRQEL 185
>gi|85860199|ref|YP_462401.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophus
aciditrophicus SB]
gi|119369274|sp|Q2LVW9.1|ENGB_SYNAS RecName: Full=Probable GTP-binding protein EngB
gi|85723290|gb|ABC78233.1| GTP-binding protein [Syntrophus aciditrophicus SB]
Length = 196
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 4/178 (2%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF +A + S +P LPE+AF GRSNVGKSS++N L R+ + RTS+ PG TQ INFF
Sbjct: 6 VEFVKSATLPSGYPPGSLPEVAFVGRSNVGKSSLINTLLRRKQLARTSNTPGRTQLINFF 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ +L VDLPGYGFA E VK W +++ Y+ R L+ V ++D + D
Sbjct: 66 NVNQELLFVDLPGYGFARVPEAVKREWGPMIETYLRDRECLRMVVFILDIRRDPSQEDLA 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
L ++ + VLTK+D + + RR ++ESL +L + ++ S+K+G G
Sbjct: 126 LKGWLDYYGRRTLFVLTKSDKLSRGESKRRQRSVQESL----ALPEMPLIFSAKTGLG 179
>gi|238650566|ref|YP_002916418.1| GTPase EngB [Rickettsia peacockii str. Rustic]
gi|259645906|sp|C4K1B9.1|ENGB_RICPU RecName: Full=Probable GTP-binding protein EngB
gi|238624664|gb|ACR47370.1| GTPase EngB [Rickettsia peacockii str. Rustic]
Length = 212
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEIAF G+SNVGKSS++N + + + S+ G T+ INFF
Sbjct: 23 KFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E + A + VM VS++S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAHNFLATLNYSCNVMYVSNRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|328865389|gb|EGG13775.1| hypothetical protein DFA_11536 [Dictyostelium fasciculatum]
Length = 453
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
FP P+IAF GRSNVGKSS+LNAL + S PG TQ++NF+ + KL LVDLP
Sbjct: 223 FPLHPFPQIAFLGRSNVGKSSLLNALLGNQ-LANVSKTPGCTQSVNFYSIWDKLMLVDLP 281
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG++ ++ W + E++ T L ++ LLID++ G + D E++ L++ + +
Sbjct: 282 GYGYSKVSKDKAAVWGRSISEFLITSPHLIKLFLLIDSRIGCQKNDLEVMKLLDDHRVAF 341
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARF 195
Q+VLTK D P + R ++E++ N S + V+ SS GI+ +R+++ + +
Sbjct: 342 QIVLTKVDKTTPNALKRIYRTLKETINDNVSCLPNVLQCSSIEMKGIQQIRSIILDVCQL 401
Query: 196 AK 197
K
Sbjct: 402 NK 403
>gi|157964167|ref|YP_001498991.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia massiliae
MTU5]
gi|157843943|gb|ABV84444.1| Hypothetical GTP-binding protein [Rickettsia massiliae MTU5]
Length = 213
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 24 KFVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 83
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 84 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 143
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VSS+S G R
Sbjct: 144 ADLLLANKREFQIIFTKSDKV----TDHKNLNDEAQNFLATLNYSCNVMYVSSRSKEGAR 199
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 200 ELKASLAK 207
>gi|39933708|ref|NP_945984.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris CGA009]
gi|81564114|sp|Q6NC42.1|ENGB_RHOPA RecName: Full=Probable GTP-binding protein EngB
gi|39647554|emb|CAE26075.1| possible GTPases [Rhodopseudomonas palustris CGA009]
Length = 216
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F A+ + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 HFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 --LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYG+A A + +W L+ ++ R +L RV +LID + G+K D
Sbjct: 82 GPPNAGLRLVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYVLIDGRHGLKDVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ ++++ YQ+VLTK D V ++A R +L + + V+ SS++GAG+
Sbjct: 142 DILKTLDKAAVSYQIVLTKADQVKAAELAERVTATVAALAKHPAAFPEVLTTSSRTGAGM 201
Query: 183 RSLRTVLSKI 192
LR + ++
Sbjct: 202 PELRAAMIRL 211
>gi|385799533|ref|YP_005835937.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
praevalens DSM 2228]
gi|309388897|gb|ADO76777.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
praevalens DSM 2228]
Length = 199
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 2/197 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+NK EF+ + P PE+AF+GRSNVGKSS++N +T+Q + RTS+ PG TQ +
Sbjct: 3 INKAEFYKSVYKYEDCPRLQQPEVAFSGRSNVGKSSLINRMTKQKKLARTSNTPGRTQCL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N+F + K LVDLPGYGFA ++VKD W EL+ Y++ R +L V +ID++
Sbjct: 63 NYFNVDDKFYLVDLPGYGFANVPQKVKDDWAELIDTYLNYRENLVGVVQIIDSRHKPTKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D +++ ++ S + +V TK D + A++ I + L N + SS++G
Sbjct: 123 DKLMVNWLQASGLNFLIVATKVDKISNNKRAKQKKLIYQEL--NLTKDDNFTFFSSQNGE 180
Query: 181 GIRSLRTVLSKIARFAK 197
G + + L + + AK
Sbjct: 181 GSKEVYKYLEFLVKSAK 197
>gi|24418386|sp|Q92JC9.2|ENGB_RICCN RecName: Full=Probable GTP-binding protein EngB
Length = 212
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 23 KFVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFN 82
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L KL +VDLPGYGFA VK+ W L+ Y+ +L+ V LLID++ G+K D ++
Sbjct: 83 LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKV 142
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V + + E ++ A + VM VS++S G R
Sbjct: 143 ADLLLANKREFQIIFTKSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGAR 198
Query: 184 SLRTVLSK 191
L+ L+K
Sbjct: 199 ELKASLAK 206
>gi|192289065|ref|YP_001989670.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris TIE-1]
gi|238692588|sp|B3QCI1.1|ENGB_RHOPT RecName: Full=Probable GTP-binding protein EngB
gi|192282814|gb|ACE99194.1| GTP-binding protein HSR1-related [Rhodopseudomonas palustris TIE-1]
Length = 216
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F A+ + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 HFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 --LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYG+A A + +W L+ ++ R +L RV +LID + G+K D
Sbjct: 82 GPPNAGLRLVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYVLIDGRHGLKDVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ ++++ YQ+VLTK D V ++A R +L + + V+ SS++GAG+
Sbjct: 142 DILKTLDKAAVSYQIVLTKADQVKAAELAERVTATVAALAKHPAAFPEVLTTSSRTGAGM 201
Query: 183 RSLRTVLSKI 192
LR + ++
Sbjct: 202 PELRAAMIRL 211
>gi|338972091|ref|ZP_08627470.1| GTP-binding protein EngB [Bradyrhizobiaceae bacterium SG-6C]
gi|338234985|gb|EGP10096.1| GTP-binding protein EngB [Bradyrhizobiaceae bacterium SG-6C]
Length = 221
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 7/197 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ + P E+AFAGRSNVGKSS++NALT + G+ RTS PG TQ + FF
Sbjct: 22 QFIWASPSIETLPPMKGVEVAFAGRSNVGKSSLINALTGRNGLARTSHTPGRTQELIFFD 81
Query: 65 LGTK-------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
T L LVD+PGYG+A A + +W L+ +++ R +L RV +LID + G
Sbjct: 82 GPTPADGKDAGLRLVDMPGYGYASAPKSQIASWTTLIHKFLQGRANLARVYVLIDARHGF 141
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
K D +++ ++RS YQVVLTK D V ++ + +L + + V++ SS+
Sbjct: 142 KDVDKDVLKTLDRSAVSYQVVLTKADQVKKSELENTIAATKAALVKHPAAFPEVLVTSSR 201
Query: 178 SGAGIRSLRTVLSKIAR 194
+G G+ LR + ++ R
Sbjct: 202 TGDGMPELRAAMIRLLR 218
>gi|225848212|ref|YP_002728375.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644647|gb|ACN99697.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 194
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF +A +P PD PE+A GRSNVGKSS++NA+ ++ V + S PG T+ INFF
Sbjct: 6 VEFIKSAVKPEDYPPPDKPEVAVVGRSNVGKSSLINAIFKR-SVAKVSSTPGKTRLINFF 64
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L + VDLPGYGFA ++ + +W+++++ Y+ R +LK + +L+DT++ D
Sbjct: 65 TLNNDIYFVDLPGYGFASVSQKERLSWQKMIENYLLNRENLKLIIMLVDTRYPPTNLDIL 124
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+ ++ + +Y VV TK D + + A+ I+E+L +++ P+ +VS+K G GI
Sbjct: 125 MKQWLDTFEKQYFVVGTKIDKLNQSEKAKAKKVIKETLDLDDN--TPIFLVSAKEGTGID 182
Query: 184 SL 185
+L
Sbjct: 183 NL 184
>gi|15892061|ref|NP_359775.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia conorii
str. Malish 7]
gi|15619181|gb|AAL02676.1| hypothetical GTP-binding protein [Rickettsia conorii str. Malish 7]
Length = 236
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 5/172 (2%)
Query: 21 LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFA 80
LPEIAF G+SNVGKSS++N + + + S+ PG T+ INFF L KL +VDLPGYGFA
Sbjct: 63 LPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFNLADKLIIVDLPGYGFA 122
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
VK+ W L+ Y+ +L+ V LLID++ G+K D ++ L+ ++ ++Q++ T
Sbjct: 123 NVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRGIKENDKKVADLLLANKREFQIIFT 182
Query: 141 KTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
K+D V + + E ++ A + VM VS++S G R L+ L+K
Sbjct: 183 KSDKV----TDHKNLHDEAQNFLATLNYSCNVMYVSNRSKEGARELKASLAK 230
>gi|337288112|ref|YP_004627584.1| GTP-binding protein engB [Thermodesulfobacterium sp. OPB45]
gi|334901850|gb|AEH22656.1| GTP-binding protein engB [Thermodesulfobacterium geofontis OPF15]
Length = 195
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF + P P PEIAF GRSNVGKSS++NA+ + V R S PG T+ INFF
Sbjct: 5 IEFVKSIYDLKDLPPPKFPEIAFLGRSNVGKSSLINAILNRKNVARVSSTPGFTKAINFF 64
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
++ + LVDLPGYGFA A E++ W+ LV+ Y++ + + L+ D + D
Sbjct: 65 RIDYQFYLVDLPGYGFAKAPAELQKKWKYLVEGYLTAPRDFRLLILIFDIRRTPDKLDIN 124
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ + + +VL K D + ++ ++ +E+L+ N P+ +VS K I
Sbjct: 125 LVEFVKYIKKPFCIVLNKIDILSKNEIDKQVKNYKEALRLNPDF--PMFLVSCKEKENIE 182
Query: 184 SLRT-VLSKI 192
LR +LSKI
Sbjct: 183 PLRKFILSKI 192
>gi|15603979|ref|NP_220494.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia prowazekii
str. Madrid E]
gi|383486948|ref|YP_005404628.1| GTP-binding protein YsxC [Rickettsia prowazekii str. GvV257]
gi|383487524|ref|YP_005405203.1| GTP-binding protein YsxC [Rickettsia prowazekii str. Chernikova]
gi|383488370|ref|YP_005406048.1| GTP-binding protein YsxC [Rickettsia prowazekii str. Katsinyian]
gi|383489213|ref|YP_005406890.1| GTP-binding protein YsxC [Rickettsia prowazekii str. Dachau]
gi|383499348|ref|YP_005412709.1| GTP-binding protein YsxC [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500188|ref|YP_005413548.1| GTP-binding protein YsxC [Rickettsia prowazekii str. RpGvF24]
gi|386081929|ref|YP_005998506.1| GTP-binding protein [Rickettsia prowazekii str. Rp22]
gi|6226324|sp|Q9ZE46.1|ENGB_RICPR RecName: Full=Probable GTP-binding protein EngB
gi|3860670|emb|CAA14571.1| unknown [Rickettsia prowazekii str. Madrid E]
gi|292571693|gb|ADE29608.1| Hypothetical GTP-binding protein [Rickettsia prowazekii str. Rp22]
gi|380757313|gb|AFE52550.1| GTP-binding protein YsxC [Rickettsia prowazekii str. GvV257]
gi|380757885|gb|AFE53121.1| GTP-binding protein YsxC [Rickettsia prowazekii str. RpGvF24]
gi|380760403|gb|AFE48925.1| GTP-binding protein YsxC [Rickettsia prowazekii str. Chernikova]
gi|380761249|gb|AFE49770.1| GTP-binding protein YsxC [Rickettsia prowazekii str. Katsinyian]
gi|380762094|gb|AFE50614.1| GTP-binding protein YsxC [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762936|gb|AFE51455.1| GTP-binding protein YsxC [Rickettsia prowazekii str. Dachau]
Length = 214
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A A + P LPEI F G+SNVGKSS++N + + + S+ PG T+ INFF
Sbjct: 25 KFVAGAIHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNTPGRTRQINFFN 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL +VDLPGYGFA VK+ WE L+ Y+ +L V LLID++ G+K D ++
Sbjct: 85 IVDKLIIVDLPGYGFANVPISVKEQWEGLITYYLRNSHNLMLVNLLIDSRRGIKENDKKV 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE-ESLKANNSLVQPVMMVSSKSGAGIR 183
L+ ++ ++Q++ TK+D V R + E ++ A + + V+ VSS++ G+R
Sbjct: 145 AELLLANKREFQIIFTKSDKV----TDRENLNYEAQNFLATLNYLCNVIYVSSRNKEGMR 200
Query: 184 SLRTVLSKIARFAK 197
L+ ++ + +
Sbjct: 201 ELKASFAQCIKHQR 214
>gi|156082736|ref|XP_001608852.1| GTP-binding protein engB [Babesia bovis T2Bo]
gi|154796102|gb|EDO05284.1| GTP-binding protein engB, putative [Babesia bovis]
Length = 290
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
KL+ A A + P LPE+AF GR+N GKS ++NA+ ++GV + PG T+ ++F
Sbjct: 38 KLKLIATAIGHNDLPPAALPEVAFYGRTNAGKSCLINAICGRYGVCPVHELPGTTRKLHF 97
Query: 63 FKLGTK--LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
+K+GT + VD+PGYG++ AK+++ W E Y+ R +LK + +L+D + G+K
Sbjct: 98 YKVGTPSTVIFVDMPGYGYSTAKDDLSMQWNEFSLSYLKHRNTLKLLVVLVDCRIGLKQS 157
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E+I+ ++ + K+QVVL K D V P+ VA+ ++ L S + +SS
Sbjct: 158 DLEVINFCDKYKVKWQVVLAKADMVKPVLVAKMLHKVRLELAIFRSSNGKPIAISSTKNQ 217
Query: 181 GIRSLRTVL 189
+ +R +L
Sbjct: 218 NLEEIRGIL 226
>gi|404494413|ref|YP_006718519.1| GTP-binding protein YsxC [Pelobacter carbinolicus DSM 2380]
gi|119369227|sp|Q3A0Y0.2|ENGB_PELCD RecName: Full=Probable GTP-binding protein EngB
gi|114843263|gb|ABA89977.2| GTPase EngB [Pelobacter carbinolicus DSM 2380]
Length = 207
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 93/161 (57%), Gaps = 7/161 (4%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE+AFAGRSNVGKSS++N L + G+VRTS PG TQ +NFF+
Sbjct: 7 EFIKSAAKPVGYPPGDLPEVAFAGRSNVGKSSLINVLVNRRGLVRTSSTPGRTQLLNFFE 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE- 123
+ LVDLPG+GFA VK AW + + Y+ R +LK V LL D + +PRD E
Sbjct: 67 VNQHFMLVDLPGFGFAKVPVSVKKAWGRMTRTYLEERTNLKAVVLLFDIRR--EPRDEEL 124
Query: 124 -LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA 163
L+ +E V+TK D V RR QI L+A
Sbjct: 125 QLLDWLEELNIPTIPVITKVDKV---TKNRRRAQIRPILEA 162
>gi|326790234|ref|YP_004308055.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
lentocellum DSM 5427]
gi|326540998|gb|ADZ82857.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
lentocellum DSM 5427]
Length = 196
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 92/159 (57%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K E A +SS FP D+PEIAFAG+SNVGKSS+LNA+ + + RTS +PG TQTINF
Sbjct: 5 KAEMIITAGLSSQFPVHDMPEIAFAGKSNVGKSSLLNAMLNRKALARTSSQPGKTQTINF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ + VDLPGYG+A + ++ W +L++ Y+ R LK++ LLID + V D
Sbjct: 65 YNVQDTYMFVDLPGYGYAKVSKTDRERWGKLIEGYLEKREQLKKIILLIDIRHEVGNNDK 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ ++ + VV TK D + V + I + L
Sbjct: 125 MMYDWIKHYHNEVIVVATKMDKIKRSQVQKHLSMIRKGL 163
>gi|229828302|ref|ZP_04454371.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM
14600]
gi|229792896|gb|EEP29010.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM
14600]
Length = 204
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+E A V+S+ P LPE+AFAGRSNVGKSS++NAL + RTS +PG TQTIN++
Sbjct: 7 VELETVAGVTSALPKNQLPEVAFAGRSNVGKSSLINALMNRKSYARTSSQPGKTQTINYY 66
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
++ ++ VDLPGYGFA E K+AW +++++Y+ T L V LL+D + D +
Sbjct: 67 RINDQIYCVDLPGYGFARVSREEKEAWGKMIEKYLVTSEQLAAVFLLLDIRHRPNANDKQ 126
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLV 168
+ ++ + V+ TK D + + + Q++E LKA+ +
Sbjct: 127 MFDWIQYMGYQAIVIATKADKIKRSQIPGQLRQMKEELKADEDTI 171
>gi|57239177|ref|YP_180313.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium
str. Welgevonden]
gi|58579135|ref|YP_197347.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium
str. Welgevonden]
gi|81557312|sp|Q5HB81.1|ENGB_EHRRW RecName: Full=Probable GTP-binding protein EngB
gi|57161256|emb|CAH58177.1| putative GTP binding protein EngB [Ehrlichia ruminantium str.
Welgevonden]
gi|58417761|emb|CAI26965.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str.
Welgevonden]
Length = 200
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 108/188 (57%), Gaps = 7/188 (3%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
M++ +F A S P +PE+A AGRSNVGKSS++NA+T R S KPG T+ I
Sbjct: 7 MSQCQFIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQI 66
Query: 61 NFFKLGTKL-CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
NF+ + L LVDLPGYG++ A +++ L++ Y+ R +L +V LLID K G K
Sbjct: 67 NFYLINKGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLIDAKVGFKE 126
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFP--IDVARRAMQIEESLKANNSLVQPVMMVSSK 177
D + I +E Q YQ+VLTK D V +DV +Q +L N ++ P++ VSSK
Sbjct: 127 IDLDFIRWLEVHQILYQLVLTKIDRVQSNVLDVIVSDIQ-NFNL---NFIIYPIINVSSK 182
Query: 178 SGAGIRSL 185
GI L
Sbjct: 183 CKQGIEEL 190
>gi|51246489|ref|YP_066373.1| hypothetical protein DP2637 [Desulfotalea psychrophila LSv54]
gi|81641346|sp|Q6AJW0.1|ENGB_DESPS RecName: Full=Probable GTP-binding protein EngB
gi|50877526|emb|CAG37366.1| conserved hypothetical GTP-binding protein [Desulfotalea
psychrophila LSv54]
Length = 193
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N + F + P LPE AFAGRSNVGKSS++N L R+ G V+ S +PG TQ +
Sbjct: 3 LNDITFLLSVHGLDQLPEDGLPEFAFAGRSNVGKSSLMNTLLRRSGFVKVSGRPGKTQGL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF+ LVDLPGYGFA +E+++ W++L+ Y+S R +LK V ++ID + K
Sbjct: 63 NFFQAAEDCMLVDLPGYGFARVSKEMQNNWQKLITSYISEREALKCVVVIIDIRHEPKAL 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIE--ESLKANNSLVQPVMMVSSKS 178
D +L+ + + + TK D + ++R A ++ +K + + + SSK+
Sbjct: 123 DRQLLDWLREQKVPVLPIYTKIDKLSGNQLSRHAAILDAGHGIKKDERI-----LFSSKT 177
Query: 179 GAGIRSLRTVL 189
G G L VL
Sbjct: 178 GQGRDELIAVL 188
>gi|91974552|ref|YP_567211.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris BisB5]
gi|119369246|sp|Q13F29.1|ENGB_RHOPS RecName: Full=Probable GTP-binding protein EngB
gi|91681008|gb|ABE37310.1| GTP-binding [Rhodopseudomonas palustris BisB5]
Length = 217
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 2/172 (1%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK--LCLVDLPGYGFA 80
E+AFAGRSNVGKSS++NALT + + RTS+ PG TQ + FF T L LVD+PGYG+A
Sbjct: 40 EVAFAGRSNVGKSSLINALTGRNALARTSNTPGRTQELIFFDGPTDAGLRLVDMPGYGYA 99
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
A + +W L+ +++ R +L RV +LID + G+K D +++ +++S YQ+V T
Sbjct: 100 AASKAKVASWTSLIHKFLQGRATLARVYVLIDGRHGLKDVDLDILKTLDKSAVSYQIVFT 159
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
K D V ++ +R + L + + ++M SS++GAG+ LR + ++
Sbjct: 160 KADQVKAAELEQRIAATKTVLAKHPAAFPELLMTSSRTGAGMPELRAAMIRL 211
>gi|333922906|ref|YP_004496486.1| GTP-binding protein engB [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333748467|gb|AEF93574.1| GTP-binding protein engB [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 197
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE+AF GRSNVGKSS++N L + G+ +TS PG TQ INFFK
Sbjct: 7 EFVTSAVNPGGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQLINFFK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYGFA E V+ W ++++ Y+ R SLK V L+D + +D ++
Sbjct: 67 VNNRFLLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHTPTVQDRQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV--SSKSGAGI 182
+ Q VV TK D + A++ I+++L SL +++ S+++G G
Sbjct: 127 YEWLLHYQVPTVVVATKVDKLSNNQWAKQQAVIKKTL----SLAPEHLLIAFSAETGRGR 182
Query: 183 RSLRTVLSK 191
L V+S
Sbjct: 183 DELLQVISH 191
>gi|58617188|ref|YP_196387.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium
str. Gardel]
gi|75432753|sp|Q5FGZ3.1|ENGB_EHRRG RecName: Full=Probable GTP-binding protein EngB
gi|58416800|emb|CAI27913.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str.
Gardel]
Length = 200
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 108/188 (57%), Gaps = 7/188 (3%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
M++ +F A S P +PE+A AGRSNVGKSS++NA+T R S KPG T+ I
Sbjct: 7 MSQCQFIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQI 66
Query: 61 NFFKLGTKL-CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
NF+ + L LVDLPGYG++ A +++ L++ Y+ R +L +V LLID K G K
Sbjct: 67 NFYLINKGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLIDAKVGFKE 126
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFP--IDVARRAMQIEESLKANNSLVQPVMMVSSK 177
D + I +E Q YQ+VLTK D V +DV +Q +L N ++ P++ VSSK
Sbjct: 127 IDLDFIRWLEVHQILYQLVLTKIDRVQSNVLDVIVSDVQ-NFNL---NFIIYPIINVSSK 182
Query: 178 SGAGIRSL 185
GI L
Sbjct: 183 CKQGIEEL 190
>gi|323703639|ref|ZP_08115282.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
nigrificans DSM 574]
gi|323531411|gb|EGB21307.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
nigrificans DSM 574]
Length = 197
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE+AF GRSNVGKSS++N L + G+ +TS PG TQ INFFK
Sbjct: 7 EFVTSAVNPGGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQLINFFK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYGFA E V+ W ++++ Y+ R SLK V L+D + +D ++
Sbjct: 67 VNNRFLLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHTPTVQDRQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV--SSKSGAGI 182
+ Q VV TK D + A++ I+++L SL +++ S+++G G
Sbjct: 127 YEWLLHYQVPTVVVATKVDKLSNNQWAKQQAVIKKTL----SLAPEHLLIAFSAETGRGR 182
Query: 183 RSLRTVLSK 191
L V+S
Sbjct: 183 DELLQVISH 191
>gi|316932099|ref|YP_004107081.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris DX-1]
gi|315599813|gb|ADU42348.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas
palustris DX-1]
Length = 216
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 110/190 (57%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F A+ + P EIAFAGRSNVGKSS++NALT + + RTS PG TQ + FF+
Sbjct: 22 HFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFFE 81
Query: 65 --LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
L LVD+PGYG+A A + +W L+ ++ R +L RV +LID + G+K D
Sbjct: 82 GPPNAGLRLVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYVLIDGRHGLKDVDL 141
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ ++++ YQ+VLTK D V +++ R +L + + V+ SS++GAG+
Sbjct: 142 DILKTLDKAAVSYQIVLTKADQVKAAELSERVTATVAALTKHPAAFPEVLTTSSRTGAGM 201
Query: 183 RSLRTVLSKI 192
LR + ++
Sbjct: 202 PELRAAMIRL 211
>gi|121534152|ref|ZP_01665977.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
gi|121307255|gb|EAX48172.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
Length = 207
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K ++ A+A +P +LPEIAF GRSNVGKSS++N+L R G+ R S PG TQTIN+
Sbjct: 10 KAQYVASAVRPDQYPPEELPEIAFIGRSNVGKSSLINSLCRHHGLARVSASPGKTQTINY 69
Query: 63 FKLGTKL--------CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTK 114
+ + KL LVDLPGYG+A A + + W V+EY LK VC L+D +
Sbjct: 70 YVVTAKLPNERRLEWYLVDLPGYGYARAGQTQRRQWTRFVEEYFLRSPRLKLVCQLVDLR 129
Query: 115 WGVKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV 174
+ D + ++ QVV TKTD + VAR I+ LK ++
Sbjct: 130 HPPQASDVAMYGWLKTHNLPVQVVATKTDKIGRTHVARHLAAIKNGLKLETG---GIIAY 186
Query: 175 SSKSGAGIRSLRTVLSKI 192
S+ +G G L V+ +I
Sbjct: 187 SALNGQGRDDLLDVIGQI 204
>gi|148266199|ref|YP_001232905.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
uraniireducens Rf4]
gi|189037180|sp|A5G964.1|ENGB_GEOUR RecName: Full=Probable GTP-binding protein EngB
gi|146399699|gb|ABQ28332.1| small GTP-binding protein [Geobacter uraniireducens Rf4]
Length = 204
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 97/161 (60%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ +EF +A + +PA D PEIAFAGRSNVGKSS++N L + +VRTS PG TQ I
Sbjct: 3 IKNVEFIKSATRPAHYPAGDFPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + + LVDLPGYGFA VK W +++ Y+S R +L+ V L++D +
Sbjct: 63 NFFDVNGEFTLVDLPGYGFARVPLAVKKEWGPMMETYLSKRSNLRGVILILDIRRTPVAE 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
D +++ + K +V+TK D V + A++A I +++
Sbjct: 123 DVQMLHWLRAYSVKPIIVVTKCDKVSKNERAKQAAVIAQTI 163
>gi|193215228|ref|YP_001996427.1| ribosome biogenesis GTP-binding protein YsxC [Chloroherpeton
thalassium ATCC 35110]
gi|238692681|sp|B3QS35.1|ENGB_CHLT3 RecName: Full=Probable GTP-binding protein EngB
gi|193088705|gb|ACF13980.1| GTP-binding protein HSR1-related [Chloroherpeton thalassium ATCC
35110]
Length = 193
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF+ + P LPEIAFAGRSNVGKSS++N L + + R S PG T+ INFF
Sbjct: 7 EFYKSVTRLEDLPKDGLPEIAFAGRSNVGKSSLMNTLMGKKDLARASATPGKTREINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K VDLPGYGFA + +++ W++L++ Y+ +R LK + LLID++ P D E+
Sbjct: 67 VNGKYYFVDLPGYGFAKVSKSLQENWQQLMEGYLKSRAELKLIVLLIDSRHPALPIDLEM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ ++ +V TKTD + +A+ + E++ + +M SS +G G +
Sbjct: 127 NEFLSFFGRRFAIVRTKTDKLNQSALAKSKRESEKAFYD----FEFIMDFSSVTGKGKKE 182
Query: 185 LRTVLS 190
L +VLS
Sbjct: 183 LLSVLS 188
>gi|330800863|ref|XP_003288452.1| hypothetical protein DICPUDRAFT_34085 [Dictyostelium purpureum]
gi|325081511|gb|EGC35024.1| hypothetical protein DICPUDRAFT_34085 [Dictyostelium purpureum]
Length = 451
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 105/175 (60%), Gaps = 3/175 (1%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNA-LTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
FP P++AF G+SN GKSS+LNA L R V S KPG T++INF++L K+ LVDL
Sbjct: 207 FPKKSYPQVAFLGKSNAGKSSLLNAILNRDMAYV--SKKPGCTKSINFYQLWEKIYLVDL 264
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYGFA ++ W E + EY+ T +L ++ LLID++ G+ D E I L+++ +
Sbjct: 265 PGYGFAKVSKKKSSVWGEAISEYLLTTPNLFKIFLLIDSRIGIHKNDIEAIELIDQHKVS 324
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
+Q+VLTK D P + Q+++ + + + ++ S+ +G+ +R+V+
Sbjct: 325 FQIVLTKIDKTKPSILKGIYNQLKDIINETSCCLPTIIQTSALESSGLNEIRSVI 379
>gi|281203575|gb|EFA77772.1| hypothetical protein PPL_09270 [Polysphondylium pallidum PN500]
Length = 410
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 20/204 (9%)
Query: 13 SSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKP--------GLTQTINFFK 64
S FPA LP+IAF GRSNVGKSS+LN L + S P G T++INF+
Sbjct: 158 SEDFPASPLPQIAFIGRSNVGKSSLLNTLLGDQ-MAHVSKTPVTINNYNYGCTKSINFYA 216
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVST-----------RVSLKRVCLLIDT 113
L K+ +VDLPGYG++ ++ W + EY+ T + LK++ LL+D+
Sbjct: 217 LWDKIMMVDLPGYGYSKVSKDKASVWGRSISEYLLTSHHCKLNLLFEKTRLKKLFLLVDS 276
Query: 114 KWGVKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMM 173
+ G++ D E++ L++ + +QV+LTK D + R Q++E + N S V ++
Sbjct: 277 RVGLQKNDIEVMKLLDEHRVAFQVILTKIDKATTTGLKRFYNQVKEEIMNNVSCVPNIIQ 336
Query: 174 VSSKSGAGIRSLRTVLSKIARFAK 197
SSK GI+ +R+V+ ++ F K
Sbjct: 337 CSSKEMKGIQQIRSVILEVTNFDK 360
>gi|225019948|ref|ZP_03709140.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum
DSM 5476]
gi|224947312|gb|EEG28521.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum
DSM 5476]
Length = 200
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 2/193 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
NK EF + + S P + EIAFAGRSNVGKSSM+N L + G+ R S PG T TI
Sbjct: 4 FNKAEFVTSYGLLSQIPPSERLEIAFAGRSNVGKSSMINKLFNRKGLARVSSVPGKTATI 63
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF++ G ++ VDLPGYG+A + K W EL++ Y + V LID +
Sbjct: 64 NFYQTGDEVYFVDLPGYGYAKVAKSEKQRWSELIEGYFHDDRDIALVVQLIDMRHPPTKL 123
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D ++I + S+ + +VLTK D + A R ++ L + + ++ SS++G
Sbjct: 124 DLQMIDFLIESEIPFLIVLTKADKLSKNQQAVRLEALQTELPYADQIT--MLPFSSETGM 181
Query: 181 GIRSLRTVLSKIA 193
G+ LR +L+++A
Sbjct: 182 GVEELREILNEVA 194
>gi|254780484|ref|YP_003064897.1| GTPase EngB [Candidatus Liberibacter asiaticus str. psy62]
gi|254040161|gb|ACT56957.1| GTPase EngB [Candidatus Liberibacter asiaticus str. psy62]
Length = 212
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 104/184 (56%), Gaps = 11/184 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGTKL 69
P PEIAF+GRSNVGKSS++N L + + RTS+ PG TQ +NFF L L
Sbjct: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83
Query: 70 ---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVD+PGYG+A A ++ D+W L+ Y+S R +L+ V LLID + GVK D ++ S
Sbjct: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGAGIRSL 185
+++ YQ+VLTK D + P A+ ++ + L N P V+ SS GI L
Sbjct: 144 FLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202
Query: 186 RTVL 189
R +
Sbjct: 203 RKAI 206
>gi|73667065|ref|YP_303081.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia canis str.
Jake]
gi|119369194|sp|Q3YS22.1|ENGB_EHRCJ RecName: Full=Probable GTP-binding protein EngB
gi|72394206|gb|AAZ68483.1| GTP-binding domain [Ehrlichia canis str. Jake]
Length = 200
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
M+K EF A SFP +PEIA AGRSNVGKSS++NA+T +TS +PG T+ I
Sbjct: 7 MSKCEFIIGATHVKSFPNFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSRPGCTKQI 66
Query: 61 NFFKLGTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
NF+ + + LVDLPGYG++ A + + L++ Y+ +L +V LLID K G K
Sbjct: 67 NFYLINKSFMVLVDLPGYGYSKATRATINNYLFLMEYYLLNSKNLLKVILLIDVKVGFKE 126
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSL---VQPVMMVSS 176
D + I+ +E + YQ+VLTK D V++ + + + N +L + PV+ SS
Sbjct: 127 IDLDFINWLELNHIYYQLVLTKIDR-----VSKEILDVNINYIKNLNLGFVIYPVISASS 181
Query: 177 KSGAGIRSL 185
K GI L
Sbjct: 182 KYKQGIGEL 190
>gi|290990283|ref|XP_002677766.1| predicted protein [Naegleria gruberi]
gi|284091375|gb|EFC45022.1| predicted protein [Naegleria gruberi]
Length = 142
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 86/132 (65%), Gaps = 2/132 (1%)
Query: 16 FPAPD--LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
FP P+ +P+IAFAGRSNVGKSS+LN++ + R S PG T+ IN+F + L +VD
Sbjct: 11 FPEPNEKMPQIAFAGRSNVGKSSLLNSIVDSDRLARVSSTPGHTKRINYFNMHDMLYVVD 70
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
LPGYG+A +E W ++++Y + L+RV +L+D ++G+ +D E + ++E S
Sbjct: 71 LPGYGYAEGNKEKIKGWNTVLRQYCTENTVLRRVFILLDARYGIYEQDCEFMDMLEESGV 130
Query: 134 KYQVVLTKTDTV 145
YQ++LTK D V
Sbjct: 131 PYQIILTKCDKV 142
>gi|188585731|ref|YP_001917276.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229813286|sp|B2A1E8.1|ENGB_NATTJ RecName: Full=Probable GTP-binding protein EngB
gi|179350418|gb|ACB84688.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 193
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 2/188 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E+ A+A +SS FP+ PEI+F GRSNVGKSS++N L + + TS +PG T+TINFF
Sbjct: 7 EYMASAYLSSQFPSEMYPEISFIGRSNVGKSSLINTLINRKNLAYTSKQPGKTRTINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VDLPGYGFA + ++ WE+LV Y+S R +LK L+ID + G K D ++
Sbjct: 67 INKSLYFVDLPGYGFAKVSKTMQKDWEQLVNAYLSQRNTLKLSILIIDGRHGPKDADIDM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ + +V TK D V +R ++ +L+ + ++ SS +G G
Sbjct: 127 FDYLLDFERPVLLVATKMDKVKANKRKQRITEMRSALELDQD--DELITFSSATGEGKNE 184
Query: 185 LRTVLSKI 192
L ++ +
Sbjct: 185 LWQIIEDL 192
>gi|375090916|ref|ZP_09737223.1| ribosome biogenesis GTP-binding protein YsxC [Helcococcus kunzii
ATCC 51366]
gi|374565052|gb|EHR36330.1| ribosome biogenesis GTP-binding protein YsxC [Helcococcus kunzii
ATCC 51366]
Length = 193
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 6/139 (4%)
Query: 10 AKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
A + S +PAP+L EIA AGRSNVGKSS++N+L + + RTS KPG T+TINF+ + K
Sbjct: 12 AVLESQYPAPNLSEIALAGRSNVGKSSLINSLINRKNLARTSQKPGKTRTINFYNIDDKF 71
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS--- 126
LVDLPGYGFA + KD W E ++ Y+S+R +LK V LL+D + +P + +L+
Sbjct: 72 RLVDLPGYGFAAVSKSEKDKWAETIERYLSSRENLKEVVLLVDIRH--EPTNDDLLMYNW 129
Query: 127 LMERSQTKYQVVLTKTDTV 145
++E + Y V+ TK D +
Sbjct: 130 ILEMGFSGY-VIATKLDKI 147
>gi|222053643|ref|YP_002536005.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter daltonii
FRC-32]
gi|254783197|sp|B9LZU0.1|ENGB_GEOSF RecName: Full=Probable GTP-binding protein EngB
gi|221562932|gb|ACM18904.1| small GTP-binding protein domain protein [Geobacter daltonii
FRC-32]
Length = 207
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 97/158 (61%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF +A ++ +P DLPEIAFAGRSNVGKSS++N L + +VRTS PG TQ INFF
Sbjct: 6 VEFIKSATRAAHYPPGDLPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFF 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ + LVDLPGYGFA VK W +++ Y++ R +L+ V L++D + D +
Sbjct: 66 DVNGQFTLVDLPGYGFAKVPLAVKKQWGPMMENYLAKRANLRGVILILDIRRTPVAEDIQ 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++ ++ K +V+TK D V + +++ I ++L
Sbjct: 126 MLHWLQAYSIKPILVITKCDKVSKNERGKQSRIIAQTL 163
>gi|451980845|ref|ZP_21929230.1| putative GTP-binding protein EngB [Nitrospina gracilis 3/211]
gi|451761967|emb|CCQ90471.1| putative GTP-binding protein EngB [Nitrospina gracilis 3/211]
Length = 203
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 6/185 (3%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF A FP LPEIAF GRSNVGKSS++N+L + +V+TS PG TQ INF
Sbjct: 5 KAEFITGAVSRKQFPNQPLPEIAFIGRSNVGKSSLINSLVNRKKLVKTSATPGKTQMINF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + L DLPGYGFA +V+ W+ L+++Y+ R L+ V L++D + KP +
Sbjct: 65 FNINDVWMLADLPGYGFAKVPPQVQKKWQVLIEDYLQERERLESVVLIVDIR--RKPTEL 122
Query: 123 ELI--SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
+L+ +E + Y VV TK+D + + ++ +I++ + V+ V+M SSK+
Sbjct: 123 DLVMRDWLEDAGLDYVVVATKSDKLSQTERKQQMAKIKKEFGGDG--VRTVLMYSSKNNH 180
Query: 181 GIRSL 185
G + L
Sbjct: 181 GRKEL 185
>gi|237844091|ref|XP_002371343.1| GTP-binding protein, putative [Toxoplasma gondii ME49]
gi|211969007|gb|EEB04203.1| GTP-binding protein, putative [Toxoplasma gondii ME49]
Length = 428
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 10 AKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
A+ P P++A G SNVGKSS+LNAL V R+ KPG T+ + F LG L
Sbjct: 215 AQTLHKLPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSKPGRTRHLFTFDLGNHL 274
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYGFA K ++K+ W L++EY + L+RV L+D GV+ D L L+
Sbjct: 275 SLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQLRRVLSLVDATKGVEALDERLWQLLA 334
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA---NNSLVQP-VMMVSSKSGAGIRSL 185
+QVVLTK D + ++ + L+A +L+ P V VSS+ GI L
Sbjct: 335 EKNLPFQVVLTKADLLTARELHAAMFDVLSRLQAVEKKETLLHPFVHAVSSRHNHGIPEL 394
Query: 186 RTVLSKIA 193
R L+ +A
Sbjct: 395 RASLAAVA 402
>gi|221506372|gb|EEE32007.1| GTP-binding protein, putative [Toxoplasma gondii VEG]
Length = 428
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 10 AKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
A+ P P++A G SNVGKSS+LNAL V R+ KPG T+ + F LG L
Sbjct: 215 AQTLHKLPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSKPGRTRHLFTFDLGNHL 274
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYGFA K ++K+ W L++EY + L+RV L+D GV+ D L L+
Sbjct: 275 SLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQLRRVLSLVDATKGVEALDERLWQLLA 334
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA---NNSLVQP-VMMVSSKSGAGIRSL 185
+QVVLTK D + ++ + L+A +L+ P V VSS+ GI L
Sbjct: 335 EKNLPFQVVLTKADLLTARELHAAMFDVLSRLQAVEKKETLLHPFVHAVSSRHNHGIPEL 394
Query: 186 RTVLSKIA 193
R L+ +A
Sbjct: 395 RASLAAVA 402
>gi|288574914|ref|ZP_06393271.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570655|gb|EFC92212.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 203
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 7/191 (3%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+ E A + FP P PEIA AGRSNVGKSS+LNAL Q + S KPG T++INF
Sbjct: 5 RAELVQTAFEARQFPEPKFPEIALAGRSNVGKSSLLNALIDQ-KIAHISSKPGKTRSINF 63
Query: 63 FKL---GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
F++ G+ LVDLPGYGFA ++ +D W +L+++YVS+R +L V L+D + G+
Sbjct: 64 FEVASGGSPFTLVDLPGYGFASRSKKEQDQWRKLIEKYVSSRQNLSLVIHLVDFRHGLLK 123
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
D EL + V TK D I +R ++ + +K+ V ++ S++
Sbjct: 124 NDVELQEWISALGVPMLTVFTKVDK---IARGKRKGELHKYIKSGLKSVDVPILTSTEGK 180
Query: 180 AGIRSLRTVLS 190
GI LRT +S
Sbjct: 181 LGIDELRTFIS 191
>gi|451948595|ref|YP_007469190.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfocapsa
sulfexigens DSM 10523]
gi|451907943|gb|AGF79537.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfocapsa
sulfexigens DSM 10523]
Length = 195
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 6/195 (3%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F + + P LPEIAFAGRSNVGKSS++N L + +V+ S +PG TQ +NFF
Sbjct: 6 IKFLLSVHKLTQLPEATLPEIAFAGRSNVGKSSLINTLVGRKSMVKVSGRPGKTQGLNFF 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
++ + LVDLPGYGFA ++D W+ L+ Y+ +R SL V +++D + K +D +
Sbjct: 66 QISEEAYLVDLPGYGFAKVSRGMQDNWQTLISSYLESRTSLCCVVVIMDLRHEAKVQDTQ 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
LIS +++ Y V TK D + + A ++ ++S ++ S+K+G G
Sbjct: 126 LISWLKQHSINYLPVYTKADKLSGNLRQKNAAILDAGHTIHSS---QRILFSAKTGMGKE 182
Query: 184 SLRTVLSKIARFAKV 198
L L A FAK+
Sbjct: 183 ELERAL---ASFAKI 194
>gi|239616939|ref|YP_002940261.1| ribosome biogenesis GTP-binding protein YsxC [Kosmotoga olearia TBF
19.5.1]
gi|259645901|sp|C5CEL1.1|ENGB_KOSOT RecName: Full=Probable GTP-binding protein EngB
gi|239505770|gb|ACR79257.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1]
Length = 190
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K+E A +P P E+AFAGRSNVGKS++LN L Q + TS KPG T++I
Sbjct: 3 IKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLF-QRKLAHTSSKPGKTRSI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + +K VDLPGYGFA A ++ W+EL+++Y STR +L V +L+D++ ++
Sbjct: 62 NFYLVNSKYYFVDLPGYGFASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQKN 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D++++ ++ + VVLTKTD + ++ + E+ LK S P++ S+K+
Sbjct: 122 DYKMLEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEKELKLWGS--PPIIPFSAKTRR 179
Query: 181 GIRSLRTVL 189
G+ L +L
Sbjct: 180 GLNELLKIL 188
>gi|163781961|ref|ZP_02176961.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1]
gi|159883181|gb|EDP76685.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1]
Length = 184
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 116/191 (60%), Gaps = 12/191 (6%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K+EF + ++ FP PD PE+ F GRSNVGKSS++N +T + + R S +PG T+TIN+
Sbjct: 2 KVEFLKST--TADFPPPDKPEVVFVGRSNVGKSSLINMVTGR-NIARVSKEPGRTRTINY 58
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTR-VSLKRVCLLIDTKWGVKPRD 121
F L + LVD+PGYGFA +E +D W+ +++ Y R +++ V LLID GV+ D
Sbjct: 59 FLLNDSVYLVDVPGYGFARVPKEEQDKWKRMMENYFKGRKENIRVVFLLIDAVAGVQKLD 118
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++I ++ + VVLTKTD +++R Q++E + ++ ++M S++ G
Sbjct: 119 RQMIEWLQFVGLPFVVVLTKTDKAKQKELSRTLKQVKELVGSS-----AIVMSSAREG-- 171
Query: 182 IRSLRTVLSKI 192
R + +LS+I
Sbjct: 172 -RGKKEILSRI 181
>gi|357009626|ref|ZP_09074625.1| GTP-binding protein YsxC [Paenibacillus elgii B69]
Length = 216
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 2/191 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N+ EF +A S +P LPEIA AGRSNVGKSS++N + + + RTS KPG TQ +
Sbjct: 3 VNQAEFIISAVGPSQYPTDALPEIALAGRSNVGKSSLINRMISRKNLARTSSKPGKTQQL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++K+ + L VDLPGYG+A + ++ W + ++ Y+ R LK V L+ID +
Sbjct: 63 NYYKINSDLFFVDLPGYGYAQVSKTEREKWGKFIENYLLHREFLKLVLLVIDLRHPPSKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + S ++ T +V TK D + + ++E+L A+ S PV++ SS+ G
Sbjct: 123 DQAMYSWLKHHGTPLCIVTTKADKIPRSKWQQHLKIVKETLGADKS--DPVVLFSSELGL 180
Query: 181 GIRSLRTVLSK 191
G L ++ +
Sbjct: 181 GKDELWQIIEE 191
>gi|82948297|dbj|BAE53161.1| GTP-binding protein engB [Magnetospirillum magneticum AMB-1]
Length = 162
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 101/162 (62%)
Query: 32 VGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAKEEVKDAWE 91
+GKSS++NALT + + RTS+ PG TQ +NFF LG +L LVD+PGYGFA A + + + W
Sbjct: 1 MGKSSLINALTGRNTLARTSNTPGRTQELNFFNLGGRLILVDMPGYGFAQAPKGLVEKWT 60
Query: 92 ELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVA 151
LV ++ R L+R +L+D++ G+K D +++ +++++ YQVVLTK D + ++
Sbjct: 61 RLVNGFLKGRSVLRRAVVLVDSRHGLKDSDRDMMKMLDKAAVVYQVVLTKADKLKAAELD 120
Query: 152 RRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
+ E +K + +++ SS+ G GI LR L+ +A
Sbjct: 121 AVQARTLEEIKGRVAAHPHLIVTSSEKGTGIPELRAELASLA 162
>gi|302391294|ref|YP_003827114.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium
arabaticum DSM 5501]
gi|302203371|gb|ADL12049.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium
arabaticum DSM 5501]
Length = 194
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 8/196 (4%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N +++ +A + +P +LPEIA AGRSNVGKSS++N + + TS KPG TQT+
Sbjct: 3 LNNVKYLCSATSPADYPRHNLPEIALAGRSNVGKSSLINQMVNRNRFAHTSSKPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + VDLPGYGFA +EVKD W E+++EY+ R +L V L++D + +P
Sbjct: 63 NFYNIDNIFSFVDLPGYGFARVPDEVKDKWSEMIEEYLFHRSNLAGVILIVDARH--EPT 120
Query: 121 DHELIS---LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
D +L+ L+E Q + VV TK D + + QI + L+ P S++
Sbjct: 121 DDDLMMYEWLLEM-QLPHLVVGTKVDKLSNSQLKPNRKQIFDKLRLEPQ--TPFTYFSAE 177
Query: 178 SGAGIRSLRTVLSKIA 193
G G + + + +I
Sbjct: 178 EGTGKNEVWSFIKEIT 193
>gi|88658079|ref|YP_507406.1| GTPase EngB [Ehrlichia chaffeensis str. Arkansas]
gi|119369195|sp|Q2GGM7.1|ENGB_EHRCR RecName: Full=Probable GTP-binding protein EngB
gi|88599536|gb|ABD45005.1| GTP-binding protein EngB [Ehrlichia chaffeensis str. Arkansas]
Length = 200
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 9/189 (4%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
M+K EF A S P +PEIA AGRSNVGKSS++NA+T +TS KPG T+ I
Sbjct: 7 MSKCEFMIGATHIKSLPDFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSKPGCTKQI 66
Query: 61 NFFKLGTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
NF+ + + LVDLPGYG++ A + + + L++ Y+ +L +V LLID K G K
Sbjct: 67 NFYLINKDFMVLVDLPGYGYSKADKTTINNYLCLMEYYLLNSRNLLKVILLIDAKVGFKE 126
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSL---VQPVMMVSS 176
D + I+ +E Q YQ+VLTK D + + + + + N +L + P++ SS
Sbjct: 127 IDLDFINWLELHQIHYQLVLTKIDK-----IKKEMLDVNVNYIKNLNLDFIMYPIISTSS 181
Query: 177 KSGAGIRSL 185
+ GI L
Sbjct: 182 QCKQGIEEL 190
>gi|221485521|gb|EEE23802.1| GTP-binding protein, putative [Toxoplasma gondii GT1]
Length = 499
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 10 AKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
A+ P P++A G SNVGKSS+LNAL V R+ KPG T+ + F LG L
Sbjct: 286 AQTLHKLPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSKPGRTRHLFTFDLGNHL 345
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYGFA K ++K+ W L++EY + L+RV L+D GV+ D L L+
Sbjct: 346 SLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQLRRVLSLVDATKGVEALDERLWQLLA 405
Query: 130 RSQTKYQVVLTKTDTVFP-------IDVARRAMQIEESLKANNSLVQP-VMMVSSKSGAG 181
+QVVLTK D + DV R +E+ +L+ P V VSS+ G
Sbjct: 406 EKNLPFQVVLTKADLLTARELHAAMFDVLSRLQTVEK----KETLLHPFVHAVSSRHNHG 461
Query: 182 IRSLRTVLSKIA 193
I LR L+ +A
Sbjct: 462 IPELRASLAAVA 473
>gi|218133239|ref|ZP_03462043.1| hypothetical protein BACPEC_01104 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992112|gb|EEC58116.1| ribosome biogenesis GTP-binding protein YsxC [[Bacteroides]
pectinophilus ATCC 43243]
Length = 195
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
V+SS P LPE+AFAG+SNVGKSS++NAL + + RTS +PG TQTINF+ + + L
Sbjct: 14 VTSSMPQTTLPEVAFAGKSNVGKSSLINALMNRKSLARTSSQPGKTQTINFYNINDVMHL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A A EEVK W +++ Y+ LK+V LLID + D + + +
Sbjct: 74 VDLPGYGYANASEEVKAKWGRMIERYLQKSQQLKQVFLLIDIRHAPSANDKLMYDWIVHN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ ++ TK D + VA+ + E L
Sbjct: 134 GYRPVIIATKLDKLKRSQVAKSVKIVREGL 163
>gi|300813662|ref|ZP_07093984.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 836 str. F0141]
gi|300512204|gb|EFK39382.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 836 str. F0141]
Length = 198
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
++PA +LPE AFAGRSNVGKSS +NA+ + + RTS PG T+TINF+K+ L LVDL
Sbjct: 17 TYPANNLPEFAFAGRSNVGKSSFINAMLGRKNLARTSSTPGKTRTINFYKVNEDLRLVDL 76
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A ++ KD+W ++ EY+ TR +L LL+D + D ++ + S
Sbjct: 77 PGYGYAKVSKKEKDSWANIINEYLETRENLLETILLVDIRHDPTQLDLQMYDYLLASGFS 136
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
V+ TK D + V + I LKA + + ++ SS + L +L I +
Sbjct: 137 GIVIATKKDKISKSSVKKNIDNIARKLKA--PVKENIIPFSSVDKDEVDELWYILEDIIK 194
Query: 195 FAK 197
F K
Sbjct: 195 FKK 197
>gi|189183737|ref|YP_001937522.1| Era/Obg family GTP-binding protein [Orientia tsutsugamushi str.
Ikeda]
gi|189180508|dbj|BAG40288.1| Era/Obg family GTP-binding protein [Orientia tsutsugamushi str.
Ikeda]
Length = 207
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 87/150 (58%), Gaps = 6/150 (4%)
Query: 2 NKLEFFAAAKV------SSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPG 55
NKL+ F AK S FPA +LPE F G+SNVGKSS++N L + + R S PG
Sbjct: 11 NKLKLFLDAKFLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPG 70
Query: 56 LTQTINFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKW 115
T+ INFF + KL LVDLPGYG++ WE+L+ Y+ R +L+ + +LID +
Sbjct: 71 RTREINFFLIANKLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLRLIYVLIDARR 130
Query: 116 GVKPRDHELISLMERSQTKYQVVLTKTDTV 145
G+K D +I+L+ ++V TK D +
Sbjct: 131 GIKDNDLAVINLVHHFNYTMKIVFTKEDKI 160
>gi|375109945|ref|ZP_09756183.1| GTP-binding protein YsxC [Alishewanella jeotgali KCTC 22429]
gi|374569979|gb|EHR41124.1| GTP-binding protein YsxC [Alishewanella jeotgali KCTC 22429]
Length = 210
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 1/190 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ F +A + PA E+AFAGRSN GKSS LN LTRQ + RTS PG TQ I
Sbjct: 8 FQQVSFLTSAPDIRALPADTGIEVAFAGRSNAGKSSALNTLTRQNNLARTSKTPGRTQLI 67
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F L + L+DLPGYGFA VK+ W++ + EY+ R SLK + +L+D + +K
Sbjct: 68 NTFTLAPEKRLIDLPGYGFAKVPLAVKEKWQKSLSEYLQQRQSLKGLVVLMDIRHPLKDL 127
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D +LI SQ ++LTK D + P + +++ E++ A VQ V + SS S
Sbjct: 128 DQQLIFWAVESQLPVLILLTKADKLGPGARKKVLLEVREAVLAFMGDVQ-VQVFSSLSKL 186
Query: 181 GIRSLRTVLS 190
G+ VL+
Sbjct: 187 GLPEFEQVLN 196
>gi|114776792|ref|ZP_01451835.1| GTP-binding protein [Mariprofundus ferrooxydans PV-1]
gi|114552878|gb|EAU55309.1| GTP-binding protein [Mariprofundus ferrooxydans PV-1]
Length = 202
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 113/191 (59%), Gaps = 6/191 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F + +FPA DLP+IA AG SNVGKSS++NAL + G+V+TS PG T+ +N F
Sbjct: 16 QFVQSVADPGAFPAVDLPQIAVAGHSNVGKSSLMNALFGRNGLVKTSKNPGCTRLLNLFD 75
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L +VDLPGYG+A A ++ + W +++ Y++ +K V LL+D + G K D +L
Sbjct: 76 VDGQLLVVDLPGYGYARAPKKEQHRWISMIEGYLAN-ADIKLVLLLLDIRHGPKDSDLQL 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I + + ++ V TK D + R+++++E A L++P M SS GI
Sbjct: 135 IEWLNEAGIRWLPVATKADK---LSGNSRSIRLQEMTDAMGGLLRP-MPTSSFKATGIDQ 190
Query: 185 LRTVL-SKIAR 194
LR V+ ++AR
Sbjct: 191 LRAVIQDELAR 201
>gi|197120176|ref|YP_002140603.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
bemidjiensis Bem]
gi|238690880|sp|B5EEM1.1|ENGB_GEOBB RecName: Full=Probable GTP-binding protein EngB
gi|197089536|gb|ACH40807.1| GTPase EngB [Geobacter bemidjiensis Bem]
Length = 214
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 95/158 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A + +P +LPEIAFAGRSNVGKSS++N L + +VRTS PG TQ INFF+
Sbjct: 7 EFIKSATKPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLINFFQ 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A VK W +++ Y+S R +L+ V L++D + D ++
Sbjct: 67 VNDDFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRTPTEEDLQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++ + VV+TK D V + AR++ I E ++
Sbjct: 127 LAWLRAFSVPPIVVITKCDKVSKNERARQSAVIMEKMQ 164
>gi|406887457|gb|EKD34232.1| hypothetical protein ACD_75C02423G0008 [uncultured bacterium]
Length = 194
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
NK+EF + P +LPEI+FAGRSNVGKSS++N L + +V+ S +PG TQ +
Sbjct: 3 FNKVEFLLSVHQLKQLPPVELPEISFAGRSNVGKSSLINTLIGRKSLVKVSARPGKTQGL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N+F++G +VDLPGYGFA + +++AW+ L+ ++ +R SLK V +++D + K +
Sbjct: 63 NYFRVGDDFFIVDLPGYGFAKVPKVMQNAWQSLISTFLESRESLKCVVVIMDIRHEPKKQ 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSL-VQPVMMVSSKSG 179
D +LI ++ V TKTD + + + A L A +S+ Q ++ S+K+G
Sbjct: 123 DTQLIQWLKEKSIPCLPVYTKTDKLSGNEREKNA----NLLDAGHSIRRQDRILFSAKTG 178
Query: 180 AGIRSLRTVLS 190
G L L+
Sbjct: 179 QGRDELIAALA 189
>gi|395242947|ref|ZP_10419935.1| Probable GTP-binding protein EngB [Lactobacillus hominis CRBIP
24.179]
gi|394484767|emb|CCI80943.1| Probable GTP-binding protein EngB [Lactobacillus hominis CRBIP
24.179]
Length = 194
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 98/164 (59%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF +A + +P DLPE A AGRSNVGKSS++N +T + + RTS +PG TQT+
Sbjct: 3 VNSSEFVISAVSNKQYPKDDLPEFALAGRSNVGKSSLINTITNRRKLARTSQQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ L LVD+PGYG+A ++ ++ + E++++Y+ TR LK + LL+D +
Sbjct: 63 NFYKINDALYLVDVPGYGYAKVSKKQREQFGEMIQDYLETRADLKGLILLVDARHDPTKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKAN 164
D + + M VV TK D + + ++ +I +++ N
Sbjct: 123 DINMFNYMTYLDLPILVVATKMDKLKKMQASQIKQKISKNIDLN 166
>gi|336313796|ref|ZP_08568718.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rheinheimera sp.
A13L]
gi|335881735|gb|EGM79612.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rheinheimera sp.
A13L]
Length = 204
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 92/159 (57%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
K F +A + PA E+AFAGRSN GKSS LN LTRQ G+ RTS PG TQ IN
Sbjct: 9 QKATFLTSAPDIKALPADTGIEVAFAGRSNAGKSSALNTLTRQNGLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F L L+DLPGYGFA VK+ W++ + EY+ R SLK + +L+D + +K D
Sbjct: 69 TFSLSENQRLIDLPGYGFAKVPLAVKEKWQKALSEYLIKRESLKGIVILMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEES 160
+LI +S + ++LTK D + P + M++ E+
Sbjct: 129 QDLIHWAVQSNLQVLLLLTKADKLSPGPRKKVLMEVTEA 167
>gi|95931072|ref|ZP_01313799.1| GTP-binding [Desulfuromonas acetoxidans DSM 684]
gi|95132881|gb|EAT14553.1| GTP-binding [Desulfuromonas acetoxidans DSM 684]
Length = 202
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F +A ++P + PEIAFAGRSNVGKSS+LN + ++ +VRTS PG TQ INFF
Sbjct: 7 QFVKSATRPGNYPPAERPEIAFAGRSNVGKSSLLNVMVQRKSLVRTSSTPGRTQLINFFD 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L ++ LVDLPGYGFA VK W +++ Y+ +R SL V +L D + + D +L
Sbjct: 67 LNEEIYLVDLPGYGFAKVPMAVKKQWGPMIQTYLQSRQSLCAVVVLFDIRRVPREEDLQL 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQI 157
+ +E + V+TK D V RRA QI
Sbjct: 127 LDWLEEYEVPTIPVITKVDKV---SRNRRAAQI 156
>gi|333370331|ref|ZP_08462342.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437]
gi|332978063|gb|EGK14801.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437]
Length = 200
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A + +PA LPEIA AGRSNVGKSS++N L + + RTS KPG TQTINF++
Sbjct: 7 EFVISAVGPAQYPADALPEIALAGRSNVGKSSLINRLIHRKNLARTSSKPGKTQTINFYR 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L D+PGYGFA + VK AW +++ Y+S R L+ V +ID + D +
Sbjct: 67 INGALFFADMPGYGFAKVPKSVKAAWGRMIEGYLSNRDELRGVIQVIDVRHPPTRDDVAM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ + +V TK D + + Q+ E L+ + P+++ S+++G G
Sbjct: 127 YEWLKHYRMPTMIVATKADKIPRGRWQKHLKQVREGLRLEAGV--PLILFSAQTGQG 181
>gi|157273342|gb|ABV27241.1| GTP-binding protein [Candidatus Chloracidobacterium thermophilum]
Length = 201
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A V++ +P P LPE+AF GRSNVGKSS++N+L G+ RTS+ PG TQ INFF++
Sbjct: 8 FLKSATVAADYPPPTLPEVAFLGRSNVGKSSLINSLLGVRGLARTSNTPGRTQLINFFEI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+L VDLPGYG+A +++++ W +++ Y+ R +L L++D + +P D +
Sbjct: 68 NRELRFVDLPGYGYARVPQKIRERWRPMIESYLYHRSALALCVLIVDVRLAPQPLDRTMY 127
Query: 126 SLMERSQTKYQVVLTKTD 143
+ + + +V TK D
Sbjct: 128 EWLVATSRPFCLVATKAD 145
>gi|218781246|ref|YP_002432564.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01]
gi|226741189|sp|B8FLF0.1|ENGB_DESAA RecName: Full=Probable GTP-binding protein EngB
gi|218762630|gb|ACL05096.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01]
Length = 205
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F ++A ++P P+LPEIAFAGRSNVGKSS++N+L ++ +V+TS PG TQ +NFF+
Sbjct: 7 KFMSSATKPGNYPPPELPEIAFAGRSNVGKSSLINSLLKRKKLVKTSSTPGRTQLLNFFE 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VDLPGYG+A +E++ W ++++ +++TR +L V L++D + ++ E
Sbjct: 67 VNESLVFVDLPGYGYAKVSKEMRKKWGQMIETFITTRKTLHGVVLILDLRRIPGGQEREN 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ + + +V TK D R+ Q +E KA + + + S+K+G G
Sbjct: 127 LAWFDLNNIPVILVATKADK---FSRQRQLAQQKEMAKALGIPLDVIHVFSAKTGQG 180
>gi|282883087|ref|ZP_06291687.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus
lacrimalis 315-B]
gi|281297064|gb|EFA89560.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus
lacrimalis 315-B]
Length = 198
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
++PA +LPE AFAGRSNVGKSS +NA+ + + RTS PG T+TINF+K+ L LVDL
Sbjct: 17 TYPANNLPEFAFAGRSNVGKSSFINAMLGRKNLARTSSTPGKTRTINFYKVNDDLRLVDL 76
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A ++ KD+W ++ EY+ TR +L LL+D + D ++ + S
Sbjct: 77 PGYGYAKVSKKEKDSWANIINEYLETRENLLETILLVDIRHDPTQLDIQMYDYLLASGFS 136
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
V+ TK D + V + I LKA + + ++ SS + L + I +
Sbjct: 137 GIVIATKKDKISKSSVKKNIDNIARKLKA--PVKENIIPFSSVDKDEVDELWYIFEDIIK 194
Query: 195 FAK 197
F K
Sbjct: 195 FKK 197
>gi|224368192|ref|YP_002602355.1| protein EngB [Desulfobacterium autotrophicum HRM2]
gi|259645891|sp|C0QLA5.1|ENGB_DESAH RecName: Full=Probable GTP-binding protein EngB
gi|223690908|gb|ACN14191.1| EngB [Desulfobacterium autotrophicum HRM2]
Length = 194
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 88/140 (62%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF +A S + P E+AFAGRSNVGKSS++N L + +V+TS KPG TQ INFF
Sbjct: 6 VEFIKSATKPSEYTEPLFLEVAFAGRSNVGKSSLINTLINRKSLVKTSSKPGCTQLINFF 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L L LVDLPGYG+A ++++ W +++ Y++ R +L+ + LLID + + + +
Sbjct: 66 LLNGNLSLVDLPGYGYAKVSKKIRAQWGPMIERYLTVRETLRAIVLLIDMRREPQREELD 125
Query: 124 LISLMERSQTKYQVVLTKTD 143
LI+ Y++VLTK D
Sbjct: 126 LINWFTAHAIPYRIVLTKAD 145
>gi|189501178|ref|YP_001960648.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeobacteroides BS1]
gi|238692282|sp|B3EP28.1|ENGB_CHLPB RecName: Full=Probable GTP-binding protein EngB
gi|189496619|gb|ACE05167.1| GTP-binding protein HSR1-related [Chlorobium phaeobacteroides BS1]
Length = 192
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 80/138 (57%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F+ + P LPEI F GRSNVGKS++LN+LT + G+ +TS PG TQ IN+F +
Sbjct: 8 FYKSVSAIDHLPKEQLPEIVFVGRSNVGKSTLLNSLTARKGLAKTSSTPGKTQLINYFVI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
VDLPGYG+A + K W +L+ YVSTR S+ V LLID++ DH +
Sbjct: 68 NESCYFVDLPGYGYAKVDKGKKYEWGKLLSHYVSTRDSITLVVLLIDSRHPDMESDHLMA 127
Query: 126 SLMERSQTKYQVVLTKTD 143
+E Y VVLTK D
Sbjct: 128 EFLEHCGRPYGVVLTKYD 145
>gi|335423866|ref|ZP_08552884.1| GTPase EngB [Salinisphaera shabanensis E1L3A]
gi|334890617|gb|EGM28879.1| GTPase EngB [Salinisphaera shabanensis E1L3A]
Length = 193
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+ F +A +FP P EIAFAGRSN GKSS LNAL + G+ RTS PG TQ INFF
Sbjct: 1 MRFICSAPNPRAFPEPAGAEIAFAGRSNAGKSSALNALCERTGLARTSKTPGRTQAINFF 60
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+L DLPGYGFA VK AW+ L++ Y++TR +L V L++D + + D +
Sbjct: 61 T-SDQLRFADLPGYGFAKVPPAVKAAWQALIEGYLATRTTLAGVVLIMDARRPLMEFDRQ 119
Query: 124 LISLMERSQTKYQVVLTKTD 143
LI E + ++LTK D
Sbjct: 120 LIGWGEEQGLGFHLLLTKAD 139
>gi|188996268|ref|YP_001930519.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931335|gb|ACD65965.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 197
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 108/194 (55%), Gaps = 3/194 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ ++F +A FP PD PEIA GRSNVGKSS++NA+ ++ + + S PG T+ I
Sbjct: 4 LKSVKFVKSAVKPEDFPPPDKPEIAIVGRSNVGKSSLINAIFKR-SIAKVSATPGKTKLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF L + VDLPGYGFA + K W+ ++++Y+ R +L + +L+DT++
Sbjct: 63 NFFLLNDDIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPTNL 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + +E + Y VV TK D + + A+ I E+L + + PV +VS+K G
Sbjct: 123 DILMKEWLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLDLSKDV--PVYLVSAKEGT 180
Query: 181 GIRSLRTVLSKIAR 194
I L + + + R
Sbjct: 181 NIDKLTSDILSMVR 194
>gi|298708864|emb|CBJ30822.1| YihA1, YihA/EngB-like GTPase [Ectocarpus siliculosus]
Length = 356
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 114/201 (56%), Gaps = 31/201 (15%)
Query: 18 APDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDK-------PGLTQTINFFKLG---- 66
A LPE+A GRSNVGKS++LNAL G+ + D+ PG T+T++FF++G
Sbjct: 137 AASLPEVALVGRSNVGKSTLLNALV---GLKKHPDQRATVSKTPGETRTLDFFQIGKGKR 193
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTR-VSLKRVCLLIDTKWGVKPRDHELI 125
K+ + D+PGYGFAYA EE + W+ L+ Y+ R LKRV LL+D + G K D E +
Sbjct: 194 AKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFL 253
Query: 126 SLMERSQ----------TKYQVVLTKTDTVFPIDVARRAM----QIEESLKANNSLVQPV 171
L+ + K Q++LTK D V ID+ARR + Q+EE + +L V
Sbjct: 254 GLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLS--V 311
Query: 172 MMVSSKSGAGIRSLRTVLSKI 192
M +S+ GAG+ L+ LS +
Sbjct: 312 MTLSALKGAGMVELQKELSSL 332
>gi|255530888|ref|YP_003091260.1| HSR1-like GTP-binding protein [Pedobacter heparinus DSM 2366]
gi|255343872|gb|ACU03198.1| GTP-binding protein HSR1-related [Pedobacter heparinus DSM 2366]
Length = 201
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F + S+ P ++PE AF GRSNVGKSS++N L Q G+ +TS +PG TQ IN F +
Sbjct: 8 FICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLINHFLI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K +VDLPGYG+A + ++ WE+ ++ Y++ R SL+ V +LID++ + D E
Sbjct: 68 NEKWYIVDLPGYGYAKVSKTSRENWEKFIRNYITKRESLQCVFVLIDSRLEPQKIDLEFC 127
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
M Q + ++ TK D + + +++L + P + S++ G G
Sbjct: 128 CWMGEIQIPFALIFTKADKQSTVKTDKNVALFKKALGGWFEEIPPYFVTSAEKGTG 183
>gi|335041125|ref|ZP_08534241.1| GTP-binding protein engB [Caldalkalibacillus thermarum TA2.A1]
gi|334178923|gb|EGL81572.1| GTP-binding protein engB [Caldalkalibacillus thermarum TA2.A1]
Length = 213
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P LPEIA AGRSNVGKSS +N + + + RTS KPG TQT+NF++
Sbjct: 7 ELVISAVSSKQYPQEALPEIALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYR 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + VDLPGYG+A ++ ++ W ++EY++TR L+ +C L+D + D +
Sbjct: 67 INGQFFFVDLPGYGYARVSKKERERWGRFIEEYLTTRQQLQLICHLVDIRHKPTRDDQMM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ V+ TK D + +A+ ++E+L+ + P++ S+++G G
Sbjct: 127 ADWLQAMALPRLVIATKADKISKGKIAKHLKLVKETLQLAKDV--PLIAFSAETGLG 181
>gi|291518670|emb|CBK73891.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Butyrivibrio
fibrisolvens 16/4]
Length = 206
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 108/180 (60%), Gaps = 2/180 (1%)
Query: 13 SSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLV 72
+S+ P DLPE+AFAG+SNVGKSS++NA+ + + R S +PG TQTINF+ + ++ +V
Sbjct: 15 TSTLPKNDLPEVAFAGKSNVGKSSLINAVMNRKALARVSAQPGKTQTINFYNINDEIYVV 74
Query: 73 DLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQ 132
DLPGYGFA A E+ ++ W ++++ Y++T ++ V LL+D + D ++ M+
Sbjct: 75 DLPGYGFAKASEKERERWGKMIETYLNTSDMIRAVFLLVDIRHTPSANDKQMFEWMDYVG 134
Query: 133 TKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
V+ TK D + + ++ + E L A + ++ SS++ G+ +++ L ++
Sbjct: 135 YDPIVIATKADKIKRSQLDKQIKMVREGLGAGKETI--IVPFSSQTKQGLDTIQDFLDQV 192
>gi|398797235|ref|ZP_10556558.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Pantoea sp.
GM01]
gi|398103355|gb|EJL93525.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Pantoea sp.
GM01]
Length = 213
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN +T Q G+ RTS PG TQ IN F+
Sbjct: 10 HFMLSAPDIRHLPADVGIEVAFAGRSNAGKSSALNTITNQKGLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ CLVDLPGYG+A EE+K W+ + EY+ R +LK + +L+D + +K D +
Sbjct: 70 VVEGKCLVDLPGYGYAQVPEEMKRKWQRSLAEYLQKRQALKGLVVLMDIRHPLKDLDQNM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I +SQ V+LTK D + AR+A + E+ A N VQ V M SS G+
Sbjct: 130 IEWAVQSQIPVLVLLTKADKL--ASGARKAQLTMVREAALAFNGDVQ-VEMFSSLKKMGV 186
Query: 183 RSLRTVLS 190
+R L
Sbjct: 187 DIVRKKLD 194
>gi|393763385|ref|ZP_10352006.1| ribosome biogenesis GTP-binding protein YsxC [Alishewanella agri
BL06]
gi|392605725|gb|EIW88615.1| ribosome biogenesis GTP-binding protein YsxC [Alishewanella agri
BL06]
Length = 207
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ F +A + PA E+AFAGRSN GKSS LN LTRQ + RTS PG TQ I
Sbjct: 8 FQQVSFLTSAPDIRALPADTGTEVAFAGRSNAGKSSALNTLTRQNNLARTSKTPGRTQLI 67
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F+L L+DLPGYGFA VK+ W++ + EY+ R SLK + +L+D + +K
Sbjct: 68 NTFELAPDKRLIDLPGYGFAKVPLAVKEKWQQSLSEYLQKRQSLKGLVVLMDIRHPLKDL 127
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D +LI S+ ++LTK D + P + +++ E+ A VQ V + SS S
Sbjct: 128 DQQLIFWAVESKLPVLLLLTKADKLGPGARKKILLEVREAALAFMGDVQ-VQLFSSLSKL 186
Query: 181 GIRSLRTVLS 190
G+ VL+
Sbjct: 187 GLPEFEQVLN 196
>gi|397168980|ref|ZP_10492416.1| GTP-binding protein YsxC [Alishewanella aestuarii B11]
gi|396089567|gb|EJI87141.1| GTP-binding protein YsxC [Alishewanella aestuarii B11]
Length = 210
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ F +A + PA E+AFAGRSN GKSS LN LTRQ + RTS PG TQ I
Sbjct: 8 FQQVSFLTSAPDIRALPADTGIEVAFAGRSNAGKSSALNTLTRQNNLARTSKTPGRTQLI 67
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F L + L+DLPGYGFA VK+ W++ + EY+ R SL+ + +L+D + +K
Sbjct: 68 NTFTLAPEKRLIDLPGYGFAKVPLAVKEKWQKSLSEYLQQRQSLRGLVVLMDIRHPLKDL 127
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D +LI SQ ++LTK D + P + +++ E+ A VQ V + SS S
Sbjct: 128 DQQLIFWAVESQLPVLILLTKADKLGPGARKKVLLEVREAALAFMGDVQ-VQVFSSLSKL 186
Query: 181 GIRSLRTVLS 190
G+ VL+
Sbjct: 187 GLPEFEQVLN 196
>gi|398796188|ref|ZP_10555816.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Pantoea sp.
YR343]
gi|398204040|gb|EJM90852.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Pantoea sp.
YR343]
Length = 213
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN +T Q G+ RTS PG TQ IN F+
Sbjct: 10 HFMLSAPDIRHLPADVGIEVAFAGRSNAGKSSALNTITNQKGLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ CLVDLPGYG+A EE+K W++ + EY+ R +LK + +L+D + +K D +
Sbjct: 70 VVEGKCLVDLPGYGYAQVPEEMKRKWQKSLAEYLQKRQALKGLVVLMDIRHPLKDLDQNM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I +SQ V+LTK D + AR+A + E+ A N VQ V M SS G+
Sbjct: 130 IEWAVQSQIPVLVLLTKADKL--ASGARKAQLTMVREASLAFNGDVQ-VEMFSSLKKMGV 186
Query: 183 RSLRTVL 189
+R L
Sbjct: 187 DIVRKKL 193
>gi|347753757|ref|YP_004861321.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Candidatus
Chloracidobacterium thermophilum B]
gi|347586275|gb|AEP10805.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Candidatus
Chloracidobacterium thermophilum B]
Length = 205
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 85/138 (61%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A ++ +P P LPE+AF GRSNVGKSS++N+L G+ RTS PG TQ INFF++
Sbjct: 8 FLKSATAAAEYPPPTLPEVAFLGRSNVGKSSLINSLLGMRGLARTSQTPGRTQLINFFEI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+L VDLPGYG+A + V++ W +++ Y++ R +L L++D + +P D +
Sbjct: 68 NRELRFVDLPGYGYARVPQAVRERWRPMIEGYLNRRSALALCVLIVDARLEPQPLDLTMY 127
Query: 126 SLMERSQTKYQVVLTKTD 143
+ ++ VV TK D
Sbjct: 128 EWLAAMSRRFCVVATKAD 145
>gi|197286653|ref|YP_002152525.1| GTP-binding protein [Proteus mirabilis HI4320]
gi|425069610|ref|ZP_18472725.1| ribosome biogenesis GTP-binding protein YsxC [Proteus mirabilis
WGLW6]
gi|425071068|ref|ZP_18474174.1| ribosome biogenesis GTP-binding protein YsxC [Proteus mirabilis
WGLW4]
gi|194684140|emb|CAR45568.1| probable GTP-binding protein [Proteus mirabilis HI4320]
gi|404597036|gb|EKA97543.1| ribosome biogenesis GTP-binding protein YsxC [Proteus mirabilis
WGLW6]
gi|404599893|gb|EKB00346.1| ribosome biogenesis GTP-binding protein YsxC [Proteus mirabilis
WGLW4]
Length = 207
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 103/189 (54%), Gaps = 1/189 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K F +A P EIAFAGRSN GKSS LNALT+Q G+ RTS PG TQ IN
Sbjct: 8 KAHFIISAPDIRHLPPDTGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGRTQLINL 67
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F++ LVDLPGYG+A EE+K W+ + EY+ R LK V +L+D + +K D
Sbjct: 68 FQIEEGRRLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKRECLKGVVILMDIRHPLKDLDM 127
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++I S+ V+LTK D + ++ M ++ +L + ++ V SS GI
Sbjct: 128 QMIDWAVDSELPTLVLLTKADKLASGARKKQLMAVQNALSEKSGDIR-VECFSSLKKIGI 186
Query: 183 RSLRTVLSK 191
LR L++
Sbjct: 187 DKLRNTLNE 195
>gi|145356924|ref|XP_001422673.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582916|gb|ABP00990.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 253
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 112/204 (54%), Gaps = 13/204 (6%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF A + P P LPEIA GRSNVGKSS++N LT + + +TS PG TQTIN ++
Sbjct: 13 EFVQACVDLAGCPKPTLPEIAVIGRSNVGKSSLVNMLTNRKSLAKTSKNPGKTQTINHYR 72
Query: 65 LGT---KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR- 120
+ T K LVDLPGYG+A A E++++ W +EY+ R SL V LLID+ VKP+
Sbjct: 73 MTTGDGKFYLVDLPGYGYANAPEDLREKWAAFTREYLIKRESLITVLLLIDST--VKPQR 130
Query: 121 -DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAM---QIEESLKANNSL---VQPVMM 173
D E + + + VV TK D + +RA +EE + + + P++
Sbjct: 131 LDLECLDWLGEAGVPVTVVFTKVDKRKKVGAGKRANPAENVEEFCREVSEYWDELPPMLY 190
Query: 174 VSSKSGAGIRSLRTVLSKIARFAK 197
SS +G G R + ++ + +F K
Sbjct: 191 TSSVNGEGKREVLNHIATLRQFFK 214
>gi|421186224|ref|ZP_15643619.1| GTPase [Oenococcus oeni AWRIB418]
gi|399967868|gb|EJO02334.1| GTPase [Oenococcus oeni AWRIB418]
Length = 198
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 97/162 (59%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
+PA +LPEIAF GRSNVGKSS++N L + G+ TS +PG TQT+NF+ L KL VD+P
Sbjct: 18 YPAGNLPEIAFVGRSNVGKSSLINTLIERNGLAHTSGQPGKTQTLNFYSLDEKLFFVDVP 77
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A + ++ + +V+EY+S+R LK V LID + D + + +E Q
Sbjct: 78 GYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDARHEPTEDDKLMYNWLEYYQVPI 137
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
+V TK D V QI+++LK N+++ ++ + K
Sbjct: 138 LIVATKADKVASGKFNAVESQIKKTLKFNSTISSLILFSAIK 179
>gi|253702485|ref|YP_003023674.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M21]
gi|259645898|sp|C6E8C5.1|ENGB_GEOSM RecName: Full=Probable GTP-binding protein EngB
gi|251777335|gb|ACT19916.1| small GTP-binding protein [Geobacter sp. M21]
Length = 214
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 93/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A + +P LPEIAFAGRSNVGKSS++N L + +VRTS PG TQ INFF+
Sbjct: 7 EFIKSATRPAHYPEGHLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLINFFQ 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A VK W +++ Y+S R +L+ V L++D + D ++
Sbjct: 67 VNDDFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRTPTEEDLQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++ + +V+TK D V + AR++ I E +
Sbjct: 127 LTWLRAFSVPPVIVITKCDKVSKNERARQSAIIMEKM 163
>gi|212696595|ref|ZP_03304723.1| hypothetical protein ANHYDRO_01135 [Anaerococcus hydrogenalis DSM
7454]
gi|212676326|gb|EEB35933.1| hypothetical protein ANHYDRO_01135 [Anaerococcus hydrogenalis DSM
7454]
Length = 195
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 95/165 (57%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N + A +S FP + EIAFAGRSNVGKSS +N+ + + +TS KPG T+TI
Sbjct: 3 INTVNLDQVAGFASQFPNDNFDEIAFAGRSNVGKSSFINSFLGKKNLAKTSSKPGKTKTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ K LVDLPGYG+A ++ K+ W L+ EY+ R +LK V LL+D + +
Sbjct: 63 NFYKINDKFRLVDLPGYGYAKVSKKEKEKWNNLIHEYLYKRENLKEVFLLVDIRHAPTKQ 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN 165
D E+ + S V+ TK D + + + +I ++L ++
Sbjct: 123 DKEMYEWIIDSGFTGFVIATKYDKIPKTHLKKHIKEIMKTLNIDD 167
>gi|308274309|emb|CBX30908.1| Probable GTP-binding protein engB [uncultured Desulfobacterium sp.]
Length = 202
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A S +P PEIAFAGRSNVGKSS++N L + +V+TS PG TQ INFF
Sbjct: 7 EFVKSAVKPSQYPEESQPEIAFAGRSNVGKSSLINTLLNRKNLVKTSSTPGRTQLINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VD+PGYG+A V+ W +++ Y+ TR +LK V L++D + P +
Sbjct: 67 INDTLGFVDIPGYGYAKVPAAVRKTWGTMIETYIQTRKTLKGVVLILDLRRIPGPEEITF 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ + + +VLTK D + + ++ M I +SL + ++ S+KS G +
Sbjct: 127 MDWLNYYNIPFILVLTKADKLSKTNQVKQHMIISKSLSIDK---DNFIIFSAKSKTGKKP 183
Query: 185 L 185
L
Sbjct: 184 L 184
>gi|145219093|ref|YP_001129802.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeovibrioides DSM 265]
gi|189037185|sp|A4SCU1.1|ENGB_PROVI RecName: Full=Probable GTP-binding protein EngB
gi|145205257|gb|ABP36300.1| GTP-binding protein, HSR1-related protein [Chlorobium
phaeovibrioides DSM 265]
Length = 191
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 77/130 (59%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S P PEI FAGRSNVGKSS+LN+LT + G+ +TS PG T+ IN+F L L VD
Sbjct: 16 SDLPEESFPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRLINYFLLNDNLYFVD 75
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A KDAW L+ YV R ++ V LL+D++ D +++ +
Sbjct: 76 IPGYGYAAVSHAEKDAWGRLLAGYVGDRAAIALVVLLLDSRHPAMKSDRDMMDFLAYHDR 135
Query: 134 KYQVVLTKTD 143
Y +VLTK D
Sbjct: 136 PYGIVLTKDD 145
>gi|334339590|ref|YP_004544570.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
ruminis DSM 2154]
gi|334090944|gb|AEG59284.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
ruminis DSM 2154]
Length = 201
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE+AF GRSNVGKSS++N + + G+ RTS PG TQ INFF+
Sbjct: 7 EFITSAVNPGGYPPGDLPEVAFVGRSNVGKSSLINKMLNRKGLARTSKTPGRTQLINFFR 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYG+A EEV+ W ++V+ Y+ R +L+ V LL+D + +D ++
Sbjct: 67 VNENFMMVDLPGYGYAKVPEEVRVRWGKMVEGYLKNRANLQGVFLLLDCRHVPTAQDKQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ VV TK D + A++ I+ +L S ++ S+++G G
Sbjct: 127 YQWLAHYGVPAVVVATKIDKLSNNQWAKQQGVIKRTLPL--SPEHRLVPFSAETGRGREE 184
Query: 185 LRTVLSK 191
L V+++
Sbjct: 185 LLEVIAQ 191
>gi|344941872|ref|ZP_08781160.1| GTP-binding protein engB [Methylobacter tundripaludum SV96]
gi|344263064|gb|EGW23335.1| GTP-binding protein engB [Methylobacter tundripaludum SV96]
Length = 210
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++ +F ++ S+ P E+AFAGRSN GKSS +N LTRQ G+ R S PG TQ +N
Sbjct: 6 HQAKFINSSPHLSNTPPDQGLEVAFAGRSNAGKSSAINTLTRQNGLARISKTPGRTQMLN 65
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF++ + VDLPGYG+A EVK W EL++ Y+++R SL + L++D + + D
Sbjct: 66 FFEINERQRFVDLPGYGYAKVPLEVKKKWHELMETYLTSRKSLCAIILVMDVRHPLTEFD 125
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ E ++ ++LTK D + +Q+++ LK +N + + + SS G
Sbjct: 126 WQMVEWCEHTRLPLHILLTKADKLNYGAAKNTLLQVQKELKDSNFPLT-IQLFSSLKKTG 184
Query: 182 IRSLRTVLSKI 192
I + L ++
Sbjct: 185 IDEVHAALDQL 195
>gi|158521131|ref|YP_001529001.1| HSR1-like GTP-binding protein [Desulfococcus oleovorans Hxd3]
gi|238686898|sp|A8ZXG6.1|ENGB_DESOH RecName: Full=Probable GTP-binding protein EngB
gi|158509957|gb|ABW66924.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3]
Length = 197
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 4/159 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A S +P DLPEIAFAGRSNVGKSSM+N L + +V+TS PG T+ INFF
Sbjct: 7 EFVISAVQPSQYPDTDLPEIAFAGRSNVGKSSMINLLVNRKNLVKTSSTPGKTRLINFFD 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L VDLPGYG+A + + W +V+ Y+S+R +L+ + LL+D + +PR+ E
Sbjct: 67 INGQLMFVDLPGYGYAKVSRKEQKTWGPMVERYLSSRKTLRGLMLLMDLR--REPREDEF 124
Query: 125 ISLM--ERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ + +++VLTK D RR +I ++
Sbjct: 125 LMMQWCAHYDIPWKMVLTKADKFKKTAADRRRHEIARAV 163
>gi|117926943|ref|YP_867560.1| small GTP-binding protein [Magnetococcus marinus MC-1]
gi|117610699|gb|ABK46154.1| small GTP-binding protein [Magnetococcus marinus MC-1]
Length = 218
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF A +P LPE+AFAGRSNVGKSS+LN L + + R S+ PG T+ +NFF+
Sbjct: 13 EFVVGAVKPEQYPDDGLPEVAFAGRSNVGKSSLLNKLLNRRQLARVSNTPGRTRELNFFR 72
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ VDLPGYG+A ++ W+ + Y ++R L+ V LL+D + G+ +D +
Sbjct: 73 INQAYYYVDLPGYGYAKVGRGQREVWDRGIGLYFNSRRDLRAVILLLDIRRGMTEQDQAM 132
Query: 125 ISLMERSQTKYQVVLTKTD--TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ + + VLTK+D P A +AM++ + K + V P+++ SS G GI
Sbjct: 133 LDFIFKMGLPVLPVLTKSDKLNANPRREAIKAMRLMVAEKVPLA-VAPLLVTSSSKGDGI 191
Query: 183 RSLRTVLSKI 192
LR L+ +
Sbjct: 192 LELRQTLATL 201
>gi|189423527|ref|YP_001950704.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter lovleyi SZ]
gi|238692100|sp|B3E2D1.1|ENGB_GEOLS RecName: Full=Probable GTP-binding protein EngB
gi|189419786|gb|ACD94184.1| small GTP-binding protein [Geobacter lovleyi SZ]
Length = 200
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+++ F +A + +P DLPEIAFAGRSNVGKSS++N + + +VRTS PG TQ I
Sbjct: 3 IHQTTFIKSAVKPADYPPVDLPEIAFAGRSNVGKSSLINVIVERKALVRTSSTPGRTQLI 62
Query: 61 NFFKLGT---KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
NFF++ L LVDLPGYG+A +VK W +++ Y+S R SL+ V L++D +
Sbjct: 63 NFFQVTGVPFSLNLVDLPGYGYAKVPLDVKRQWGPMMERYLSGRESLRGVVLILDIRRIP 122
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNS 166
D ++++ + + + +VLTK D V + AR+ I L+ + S
Sbjct: 123 SEEDLQMLNWLRSYKRRPIIVLTKCDKVTKNERARQTAAIAARLEMDKS 171
>gi|379723753|ref|YP_005315884.1| protein EngB [Paenibacillus mucilaginosus 3016]
gi|378572425|gb|AFC32735.1| EngB [Paenibacillus mucilaginosus 3016]
Length = 225
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N+ EF +A S +PA LPEIA AGRSNVGKSS++N + ++ + RTS KPG TQ +
Sbjct: 3 VNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++++ L VDLPGYG+A + ++ W + +++Y++ R LK V +ID +
Sbjct: 63 NYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + +V+TK D + + + E+L A+ P+++ SS+ G
Sbjct: 123 DQAMYAWLKHNGVPLCIVVTKADKIPRGKWQQHLKIVRETLGADKD--DPMILFSSELGI 180
Query: 181 GIRSLRTVL 189
G L +++
Sbjct: 181 GKDELWSLI 189
>gi|325847177|ref|ZP_08169976.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480957|gb|EGC84003.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 195
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 95/165 (57%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N + A +S FP + EIAFAGRSNVGKSS +N+ + + +TS KPG T+TI
Sbjct: 3 INTVNLDQVAGFASQFPKDNFDEIAFAGRSNVGKSSFINSFLGKKNLAKTSSKPGKTKTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ + LVDLPGYG+A ++ K+ W L+ EY+ R +LK V LL+D + +
Sbjct: 63 NFYKINDRFRLVDLPGYGYAKVSKKEKEKWNNLIHEYLYKRENLKEVFLLVDIRHAPTKQ 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN 165
D E+ + S V+ TK D + + + +I ++L ++
Sbjct: 123 DKEMYEWIVDSGFTGFVIATKYDKIPKTHLKKHIKEIMKTLNIDD 167
>gi|256544471|ref|ZP_05471844.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus
vaginalis ATCC 51170]
gi|256399796|gb|EEU13400.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus
vaginalis ATCC 51170]
Length = 195
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 91/156 (58%)
Query: 10 AKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
A +S FP D EIAFAGRSNVGKSS +N+ + + +TS KPG T+TINF+K+ K
Sbjct: 12 AGFASQFPNDDFEEIAFAGRSNVGKSSFINSFLDKKNLAKTSSKPGKTKTINFYKINDKF 71
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A + K+ W L+ +Y+ R +LK V LL+D + +D E+ +
Sbjct: 72 RLVDLPGYGYAKVSKTEKEKWNNLIHKYLYERENLKEVFLLVDIRHAPTKQDKEMYDWII 131
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN 165
S V+ TK D + + + +I ++L ++
Sbjct: 132 DSGFTGFVIATKYDKIPKTHLKKHIKEIMKTLNIDD 167
>gi|194334829|ref|YP_002016689.1| ribosome biogenesis GTP-binding protein YsxC [Prosthecochloris
aestuarii DSM 271]
gi|238693315|sp|B4S596.1|ENGB_PROA2 RecName: Full=Probable GTP-binding protein EngB
gi|194312647|gb|ACF47042.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 192
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F+ + P LPEI F GRSNVGKS++LN LT + + +TS PG TQ IN+F +
Sbjct: 8 FYKSCSELKGLPVSSLPEIVFVGRSNVGKSTLLNTLTGRKALAKTSSTPGKTQLINYFTI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+L VDLPGYG+A + + W L+ Y+S R + V LLID++ D ++I
Sbjct: 68 NDRLYFVDLPGYGYAKVAKGQRYEWGRLLGGYISEREEISLVVLLIDSRHPDMESDQQMI 127
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+E Q Y +VLTK D + + +R + ++LK+ + + ++ S+ SG G SL
Sbjct: 128 EFLEYYQRPYGIVLTKYDKLKQKEKSR----VRKALKSFSLKTKFIVNYSALSGEGKESL 183
>gi|118581676|ref|YP_902926.1| ribosome biogenesis GTP-binding protein YsxC [Pelobacter
propionicus DSM 2379]
gi|166225967|sp|A1AU48.1|ENGB_PELPD RecName: Full=Probable GTP-binding protein EngB
gi|118504386|gb|ABL00869.1| small GTP-binding protein [Pelobacter propionicus DSM 2379]
Length = 200
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF +A +P LPE+AF GRSNVGKSS++N L + +VRTS PG TQ INF
Sbjct: 5 KAEFIKSAVKPKDYPLETLPEVAFVGRSNVGKSSLINVLANRKSLVRTSSTPGRTQLINF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + L LVDLPGYG+A A +V+ W +++ Y++ R +L+ V L++D + D
Sbjct: 65 FDINGVLTLVDLPGYGYAKAPPDVRKQWGPMIETYLARRGNLRAVVLILDIRRIPSDGDL 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKAN-NSLVQ 169
+++ +E VLTK D + ++ A++ I ++K + N L+
Sbjct: 125 QMLGWLETYDIPPIFVLTKCDKLSKVERAKQTALIASAIKRDRNELLH 172
>gi|337750705|ref|YP_004644867.1| protein EngB [Paenibacillus mucilaginosus KNP414]
gi|336301894|gb|AEI44997.1| EngB [Paenibacillus mucilaginosus KNP414]
Length = 225
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N+ EF +A S +PA LPEIA AGRSNVGKSS++N + ++ + RTS KPG TQ +
Sbjct: 3 VNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++++ L VDLPGYG+A + ++ W + +++Y++ R LK V +ID +
Sbjct: 63 NYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + +V+TK D + + + E+L A+ P+++ SS+ G
Sbjct: 123 DQAMYAWLKHNGVPLCIVVTKADKIPRGKWQQHLKIVRETLGADKD--DPMILFSSELGI 180
Query: 181 GIRSLRTVL 189
G L +++
Sbjct: 181 GKDELWSLI 189
>gi|296134050|ref|YP_003641297.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens
JR]
gi|296032628|gb|ADG83396.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens
JR]
Length = 205
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P PEIAFAGRSNVGKSS++N LT + G+ +TS +PG TQ +NF+
Sbjct: 7 EFIISAPGPKQYPVEGYPEIAFAGRSNVGKSSLINTLTNRKGLAKTSSRPGKTQLLNFYL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VDLPGYGFA +E K W ++++ Y+ R L V LID + D +
Sbjct: 67 INKSLYFVDLPGYGFARVSKETKSYWGKMIENYLKNREELVAVVQLIDIRHAPSRDDITM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ + +VL K D + A+ A I +SL + PV++ S+++ G
Sbjct: 127 HQWLKHYRIPTVLVLNKADKITRGKWAQHAKIIRQSLMP--APETPVVVFSAETRQGREE 184
Query: 185 LRTVLSKIAR 194
L +L K+ +
Sbjct: 185 LLGILDKMVK 194
>gi|386726505|ref|YP_006192831.1| GTP-binding protein YsxC [Paenibacillus mucilaginosus K02]
gi|384093630|gb|AFH65066.1| GTP-binding protein YsxC [Paenibacillus mucilaginosus K02]
Length = 225
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N+ EF +A S +PA LPEIA AGRSNVGKSS++N + ++ + RTS KPG TQ +
Sbjct: 3 VNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++++ L VDLPGYG+A + ++ W + +++Y++ R LK V +ID +
Sbjct: 63 NYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + +V+TK D + + + E+L A+ P+++ SS+ G
Sbjct: 123 DQAMYAWLKHNGVPLCIVVTKADKIPRGKWQQHLKIVRETLGADKD--DPMILFSSELGI 180
Query: 181 GIRSLRTVL 189
G L +++
Sbjct: 181 GKDELWSLI 189
>gi|304440711|ref|ZP_07400595.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304370898|gb|EFM24520.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 200
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 93/152 (61%)
Query: 15 SFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDL 74
++P +L EIAFAGRSNVGKSS +N++ + + RTS PG T+TINF+ + KL LVDL
Sbjct: 17 TYPDENLMEIAFAGRSNVGKSSFINSMLGRKNLARTSSSPGKTRTINFYNIDEKLRLVDL 76
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG+A +E K +W +++ EY+ +R +LK V LL+D + +D E+ ++ +
Sbjct: 77 PGYGYAKVSKEEKSSWAKIINEYLESRENLKEVFLLVDIRHDPTKQDIEMFRFIKEAGFV 136
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNS 166
VV TK+D + + I + LK N+
Sbjct: 137 GIVVATKSDKISKSKAITQIKNIAKVLKTENT 168
>gi|39998104|ref|NP_954055.1| GTP-binding protein YsxC [Geobacter sulfurreducens PCA]
gi|81831965|sp|Q748I9.1|ENGB_GEOSL RecName: Full=Probable GTP-binding protein EngB
gi|39985049|gb|AAR36405.1| GTPase EngB [Geobacter sulfurreducens PCA]
Length = 206
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 88/157 (56%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + +P DL EIAF GRSNVGKSS++N L + +VRTS PG TQ INFF+
Sbjct: 8 EFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFR 67
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L LVDLPGYGFA EVK W +V+ Y++ R L V L++D + D +
Sbjct: 68 VNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEEDRLM 127
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ + VV+TK D V + A++A I +L
Sbjct: 128 LQWLRAYDIPVLVVITKCDKVSKNERAKQASLISRTL 164
>gi|110598119|ref|ZP_01386397.1| GTP-binding [Chlorobium ferrooxidans DSM 13031]
gi|110340251|gb|EAT58748.1| GTP-binding [Chlorobium ferrooxidans DSM 13031]
Length = 202
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F + S P PEI FAGRSNVGKS++LN+LT + +TS PG T+ IN+F +
Sbjct: 18 FHISVSALSGLPEESTPEIVFAGRSNVGKSTLLNSLTGLKALAKTSSTPGKTRLINYFLI 77
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ VDLPGYG+A +E K AW L+ Y+ R S+ V LL D++ D +I
Sbjct: 78 NQEFYFVDLPGYGYAAVGQEQKAAWGHLLSSYIEERQSISLVVLLFDSRHPAMESDRAMI 137
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+ +E + Y +VLTK D + ++A + +I ES A ++ SS SG G L
Sbjct: 138 NFLEFHERPYGIVLTKFDKLTQKEMA-KTRRIMESCAAKAKF---IVNYSSFSGKGKSEL 193
Query: 186 RTVLSKIAR 194
L R
Sbjct: 194 LAHLDHYIR 202
>gi|119358159|ref|YP_912803.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeobacteroides DSM 266]
gi|166225950|sp|A1BJ02.1|ENGB_CHLPD RecName: Full=Probable GTP-binding protein EngB
gi|119355508|gb|ABL66379.1| GTP-binding protein, HSR1-related protein [Chlorobium
phaeobacteroides DSM 266]
Length = 192
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 81/138 (58%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F+ +A S P +PEI FAGRSNVGKS++LN+L G+ +TS PG T+ INFF +
Sbjct: 8 FYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTRLINFFLV 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
VDLPGYGFA E +AW++L+ Y+ R ++ V LL+D++ D E+I
Sbjct: 68 NKAFFFVDLPGYGFAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAMQSDREMI 127
Query: 126 SLMERSQTKYQVVLTKTD 143
+ Y +VLTK D
Sbjct: 128 DYLTYLGKPYGIVLTKDD 145
>gi|225850861|ref|YP_002731095.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina
EX-H1]
gi|225646661|gb|ACO04847.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina
EX-H1]
Length = 203
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K++F +A +P P PE+A GRSNVGKSS++NA+ ++ + + S PG T+ I
Sbjct: 4 IKKVQFIKSAVNPKDYPQPKYPEVAVVGRSNVGKSSLINAIFKR-NIAKVSSSPGKTRLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF L ++ VDLPGYG+A + + W++++++Y TR +L V +L+D++
Sbjct: 63 NFFLLNDRISFVDLPGYGYAAVSKAERAKWKKMIEKYFQTRENLSLVIMLVDSRHPPTKL 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + +E Y VV TK D + + AR I E+L PV + S+K G
Sbjct: 123 DIMMKEWLEDLGIPYIVVATKADKLNQSEKARTKKVIRETLGLPKDF--PVFLTSAKEGT 180
Query: 181 GIRSL 185
GI+ L
Sbjct: 181 GIKEL 185
>gi|409913458|ref|YP_006891923.1| GTPase EngB [Geobacter sulfurreducens KN400]
gi|298507043|gb|ADI85766.1| GTPase EngB [Geobacter sulfurreducens KN400]
Length = 206
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 88/157 (56%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + +P DL EIAF GRSNVGKSS++N L + +VRTS PG TQ INFF+
Sbjct: 8 EFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFR 67
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L LVDLPGYGFA EVK W +V+ Y++ R L V L++D + D +
Sbjct: 68 VNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEEDRLM 127
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ + VV+TK D V + A++A I +L
Sbjct: 128 LQWLRAYDIPVLVVITKCDKVSKNERAKQASLISRTL 164
>gi|312143238|ref|YP_003994684.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
hydrogeniformans]
gi|311903889|gb|ADQ14330.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
hydrogeniformans]
Length = 200
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 2/193 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F+ + P PE+AF+GRSNVGKSS++N +T++ + RTS+ PG TQ++N+F
Sbjct: 7 KFYKSVYKYEECPRLQQPEVAFSGRSNVGKSSLINRITKRKKLARTSNTPGRTQSLNYFN 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K LVDLPGYGFA ++VKD W EL+ Y++ R +L + +ID++ D +
Sbjct: 67 IDDKFYLVDLPGYGFANVPKKVKDDWAELIDSYLNYRENLIGIVQIIDSRHKPTKDDKMM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ ++ S + + TK D + + A++ I + L + + S+++G G +
Sbjct: 127 VEWLKASGLSFLIAATKVDKISNNERAKQKKIILKELNLDKE--DNFIFFSAETGEGSKE 184
Query: 185 LRTVLSKIARFAK 197
+ L + + AK
Sbjct: 185 IYNYLESLLQLAK 197
>gi|304415126|ref|ZP_07395853.1| GTPase [Candidatus Regiella insecticola LSR1]
gi|304283022|gb|EFL91458.1| GTPase [Candidatus Regiella insecticola LSR1]
Length = 228
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 86/138 (62%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F ++A PA + EIAFAGRSN GKSS LNALT + G+ RTS PG TQ IN F++
Sbjct: 34 FISSAPDIHHLPAYEGIEIAFAGRSNAGKSSALNALTHKKGLARTSKTPGRTQLINLFEV 93
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
LVDLPGYG+A K+E+K+ W+ + +Y++ R LK + +L+D + +K D ++I
Sbjct: 94 ADGKRLVDLPGYGYAAVKKEIKNQWQHALNDYLNKRDCLKGLVVLMDIRHPLKESDQQMI 153
Query: 126 SLMERSQTKYQVVLTKTD 143
SL ++LTK D
Sbjct: 154 SLAVAVDIPIFLLLTKAD 171
>gi|237755489|ref|ZP_04584111.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692353|gb|EEP61339.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 197
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ ++F +A FP P+ PEIA GRSNVGKSS++NA+ ++ + + S PG T+ I
Sbjct: 4 LKSVKFVKSAVKPEDFPPPNKPEIAIVGRSNVGKSSLINAIFKR-SIAKVSATPGKTRLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF L + VDLPGYGFA + K W+ ++++Y+ R +L + +L+DT++
Sbjct: 63 NFFLLNDDIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPTNL 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + +E + Y VV TK D + + A+ I E+L + ++ PV +VS+K G
Sbjct: 123 DVLMKEWLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLDLSKNV--PVYLVSAKEGT 180
Query: 181 GIRSL 185
I L
Sbjct: 181 NIDKL 185
>gi|417837748|ref|ZP_12483986.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
johnsonii pf01]
gi|338761291|gb|EGP12560.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
johnsonii pf01]
Length = 194
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 94/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE A AGRSNVGKSS++N + + + RTS +PG TQT+NF+K
Sbjct: 7 EFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL LVD+PGYG+A ++ + A+ E++++Y+ TR LK + LL+D + D +
Sbjct: 67 VNNKLYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTADDINM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ VV TK D + ++ ++ +I +SL
Sbjct: 127 FNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL 163
>gi|260771615|ref|ZP_05880535.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14]
gi|260613392|gb|EEX38591.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14]
Length = 218
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA D EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPADDGIEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQQRSSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQI----EESLKANNSLVQPVMMVSSKSGA 180
+ QV+LTK D + R Q+ EESL + V + SS +G
Sbjct: 131 VLWAVECAIPVQVLLTKADK---LKSGARKAQLNKIREESLSFGGDV--SVDVYSSLNGL 185
Query: 181 GIRSLRTVL 189
G+ +LR+ L
Sbjct: 186 GVDTLRSKL 194
>gi|149278824|ref|ZP_01884959.1| GTPase EngB [Pedobacter sp. BAL39]
gi|149230443|gb|EDM35827.1| GTPase EngB [Pedobacter sp. BAL39]
Length = 209
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 96/176 (54%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F + S+ P ++PE AF GRSNVGKSS++N L Q G+ +TS +PG TQ IN F +
Sbjct: 8 FICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLINHFLI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K +VDLPGYG+A + ++ WE+ ++ Y++ R SL+ V +LID++ + D E
Sbjct: 68 NEKWYIVDLPGYGYAKVSKNSREKWEKFIRNYITKRESLQCVFVLIDSRLEPQKIDLEFC 127
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
M Q + ++ TK D + + +++L + P + S++ G
Sbjct: 128 CWMGEIQIPFALIFTKADKQSKVKTDQNVAAFKKALGGWFEEIPPYFVTSAEKALG 183
>gi|323140765|ref|ZP_08075684.1| ribosome biogenesis GTP-binding protein YsxC [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414783|gb|EFY05583.1| ribosome biogenesis GTP-binding protein YsxC [Phascolarctobacterium
succinatutens YIT 12067]
Length = 216
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 86/154 (55%), Gaps = 11/154 (7%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
+ ++ A+A + +P P L E AF GRSNVGKSS++N+L R+ G+ R S PG TQTINF
Sbjct: 10 RAKYVASAVRADQYPQPALIEAAFIGRSNVGKSSLINSLCRRNGLARVSSTPGKTQTINF 69
Query: 63 FKLGTK-----------LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLI 111
++L K LVDLPGYGFA KD W + +Y+S +L VC LI
Sbjct: 70 YELEAKRVVEGEDERASFYLVDLPGYGFAKTNHNNKDQWSGFISKYLSGSENLGVVCQLI 129
Query: 112 DTKWGVKPRDHELISLMERSQTKYQVVLTKTDTV 145
D + D E + + K QVVLTK+D +
Sbjct: 130 DIRHKPMDSDMECFNWLRSCGLKVQVVLTKSDKL 163
>gi|156085860|ref|XP_001610339.1| GTP-binding protein [Babesia bovis T2Bo]
gi|154797592|gb|EDO06771.1| GTP-binding protein, putative [Babesia bovis]
Length = 260
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVR-------------------TSDKPGLT 57
P +P++A GRSNVGKSS++N+L + + S+ PG T
Sbjct: 51 PKKKIPQVAIVGRSNVGKSSIINSLLYRQMIPHFARNMLSNGQLLKNPKFAPVSNNPGRT 110
Query: 58 QTINFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
+ + F LG +L LVDLPGYGFA + +++ W LV +Y+ SL+RV LID + G
Sbjct: 111 RHMFTFDLGAELSLVDLPGYGFAKVNDNIRNEWSVLVNKYLEESTSLQRVLSLIDARRGP 170
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSS 176
RD +L S++E + +QVVLTK + + PI++ ++ E + A+ V P + S+
Sbjct: 171 MERDLKLWSMLEELRVPFQVVLTKCEALKPIELHMVCQRVAEMVLAHGETVHPYIHSTSA 230
Query: 177 KSGAGIRSLRTVLSKIARFAK 197
GI LR ++ IA K
Sbjct: 231 LKQLGIHELRLSIAHIASTHK 251
>gi|139438420|ref|ZP_01771936.1| Hypothetical protein COLAER_00926 [Collinsella aerofaciens ATCC
25986]
gi|133775959|gb|EBA39779.1| ribosome biogenesis GTP-binding protein YsxC [Collinsella
aerofaciens ATCC 25986]
Length = 196
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 101/182 (55%), Gaps = 4/182 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F A+ S P PE++F GRSNVGKSS++N L + +V+ S PG T INFF+
Sbjct: 11 KFVASYGKVSQIPESTCPEVSFVGRSNVGKSSIMNKLFGRKNLVKVSSTPGKTSNINFFE 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ VDLPGYGFA + +D W EL+ ++ + S V L+D + DH++
Sbjct: 71 -ADDVHFVDLPGYGFARRSKAERDRWAELIGDFFDSERSFNLVVSLVDIRHDPSKLDHDM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I ++ ++ + V LTK D + AR+A I++ L N + V++ SS++G GI
Sbjct: 130 IDYLQGNEFNFIVCLTKADKLSRTQQARQAAAIKKQL---NVPAENVIITSSQTGTGIDE 186
Query: 185 LR 186
L+
Sbjct: 187 LK 188
>gi|399032400|ref|ZP_10731869.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flavobacterium
sp. CF136]
gi|398069252|gb|EJL60619.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flavobacterium
sp. CF136]
Length = 206
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + S P LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 3 INTAEFIISNSEVSKCPQDFLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A ++ K +++ + +Y TR L +LID + +
Sbjct: 63 NHFKINNNWFLVDLPGYGYAKVSKKTKSVFQQFITDYFETREQLVCAFVLIDIRHEAQNI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
D E +S M S+ + ++ TK D + V ++ + ANN P V+S
Sbjct: 123 DIEFMSYMGESEIPFCIIFTKADKISKTKVDSHIAAYKKQMFANNWEEMPHYFVTS 178
>gi|328952831|ref|YP_004370165.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109]
gi|328453155|gb|AEB08984.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A P LPE+AF GRSNVGKSS++NAL + +VRTS +PG TQ IN+F
Sbjct: 10 EFVVSAHQIEQLPGGVLPEVAFWGRSNVGKSSLINALLHRQNLVRTSSRPGCTQAINYFL 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ VDLPGYG+A A VK+ W L+ Y+ T+ L+ V L+D + P + +
Sbjct: 70 VNRVWHFVDLPGYGYAQAPLPVKEKWLRLISTYLETQKRLRAVVWLLDARRQPGPEELDW 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ + + + VVLTK D + RR +I L + Q + S+ + G R
Sbjct: 130 LDRLRSWRQEVVVVLTKADKIKRGQRDRRQSEIAAQLAPSGVKAQDFIWFSTLTQEGRRE 189
Query: 185 LRTVLSKIARF 195
L +I RF
Sbjct: 190 L---WGQIMRF 197
>gi|66827277|ref|XP_646993.1| hypothetical protein DDB_G0268824 [Dictyostelium discoideum AX4]
gi|60475065|gb|EAL73001.1| hypothetical protein DDB_G0268824 [Dictyostelium discoideum AX4]
Length = 432
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Query: 13 SSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLV 72
S FP P++AF G+SNVGKS++LN++ R+ + S G T+TINF+++ KL LV
Sbjct: 223 SVDFPKKHFPQVAFLGKSNVGKSTLLNSVLRR-DLAYVSKSAGCTKTINFYQIWEKLYLV 281
Query: 73 DLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQ 132
DLPGYGFA ++ W + E++ T +L +V LLID++ + D E +SL+++ +
Sbjct: 282 DLPGYGFAKVSKKKSTVWGNAISEFLLTSPNLFKVFLLIDSRNKIHKNDIEAMSLLDQHK 341
Query: 133 TKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
+Q+VLTK D P + ++E ++ + ++ SS GI +RT +
Sbjct: 342 VSFQIVLTKIDKTTPSMLRSLYGSLKEEIQKTTCCLPTIIQTSSVDSKGIDDIRTTI 398
>gi|163815262|ref|ZP_02206639.1| hypothetical protein COPEUT_01422 [Coprococcus eutactus ATCC 27759]
gi|158449457|gb|EDP26452.1| ribosome biogenesis GTP-binding protein YsxC [Coprococcus eutactus
ATCC 27759]
Length = 206
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 91/157 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E ++S P +LPEIAFAG+SNVGKSS++N L + + RTS +PG TQTINF+
Sbjct: 7 ELETVCGITSKLPDNELPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTINFYN 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L VDLPGYG+A E++ W ++++ Y+ T LK+V LLID + D +
Sbjct: 67 INKELYFVDLPGYGYAKVSVEIRAKWGKMIENYLHTSAQLKKVFLLIDIRHVPSENDCLM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ + + ++ TK D + V + QI+E L
Sbjct: 127 YDWIVNNGYEPVIICTKLDKIKRSQVQKNLKQIKEKL 163
>gi|281425242|ref|ZP_06256155.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris
F0302]
gi|299142639|ref|ZP_07035769.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735]
gi|281400708|gb|EFB31539.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris
F0302]
gi|298575854|gb|EFI47730.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735]
Length = 198
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 98/194 (50%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A S P D PE AF GRSNVGKSS++N L G+ +TS PG T I
Sbjct: 3 IKKSEFVISAPTVSKCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F + + LVDLPGYGFA + V+ E+++ Y+ R L V +LID + +
Sbjct: 63 NHFIINNEWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQLINVFVLIDIRHEQQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E I + S + +V TK D + P + A + E LK + P + SS+
Sbjct: 123 DREFIDWLGESNVPFTIVFTKADKLGPGKAKQNAQKWLEQLKDRWETLPPYYITSSEKKL 182
Query: 181 GIRSLRTVLSKIAR 194
G L + +I +
Sbjct: 183 GREELLAYIDEINK 196
>gi|148284762|ref|YP_001248852.1| ribosome biogenesis GTP-binding protein YsxC [Orientia
tsutsugamushi str. Boryong]
gi|146740201|emb|CAM80484.1| Hypothetical GTP-binding protein [Orientia tsutsugamushi str.
Boryong]
Length = 186
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 81/137 (59%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
A S FPA +LPE F G+SNVGKSS++N L + + R S PG T+ INFF + K
Sbjct: 3 GASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRTREINFFLIANK 62
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVDLPGYG++ WE+L+ Y+ R +L+ + +LID + G+K D +I+L+
Sbjct: 63 LILVDLPGYGYSKTAVVTCKNWEKLILSYLEDRKNLRLIYVLIDARRGIKDNDLAVINLV 122
Query: 129 ERSQTKYQVVLTKTDTV 145
++V TK D +
Sbjct: 123 HHFNYTMKIVFTKEDKI 139
>gi|257790850|ref|YP_003181456.1| HSR1-like GTP-binding protein [Eggerthella lenta DSM 2243]
gi|317488439|ref|ZP_07946992.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp.
1_3_56FAA]
gi|325831912|ref|ZP_08165009.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. HGA1]
gi|257474747|gb|ACV55067.1| GTP-binding protein HSR1-related [Eggerthella lenta DSM 2243]
gi|316912483|gb|EFV34039.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp.
1_3_56FAA]
gi|325486233|gb|EGC88685.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. HGA1]
Length = 193
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 105/194 (54%), Gaps = 3/194 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N + F + VSS +PEIAFAGRSNVGKSS+LN L + G+ + S PG T TI
Sbjct: 3 INNVVFERSFGVSSQLTPSTMPEIAFAGRSNVGKSSLLNKLFNRKGLAKVSQTPGKTATI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + VDLPGYG+A + K W EL++ Y + L V L+D +
Sbjct: 63 NFFSC-DGVRFVDLPGYGYAKVSKSDKSRWSELIEGYFNQDRDLALVVSLVDIRHEASDL 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D +I ++ ++ + VVLTK D + ++ +++ LK + P+++ SS+ G
Sbjct: 122 DVNMIGFLQEAELPFAVVLTKADKLSRQQQMKQKAALKKQLKLGADV--PLVVCSSEKGT 179
Query: 181 GIRSLRTVLSKIAR 194
GI LR+++ R
Sbjct: 180 GIDELRSLIKNSVR 193
>gi|387886921|ref|YP_006317220.1| GTPase EngB [Francisella noatunensis subsp. orientalis str. Toba
04]
gi|386871737|gb|AFJ43744.1| GTPase EngB [Francisella noatunensis subsp. orientalis str. Toba
04]
Length = 197
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 1/156 (0%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
+AAKVS P E+AFAGRSN GKSS LNALT Q G+ R S PG TQ IN F LG
Sbjct: 10 MSAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNALTDQKGLARVSKTPGRTQLINLFDLG 68
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVDLPGYG+A E +K W+ ++ Y+++R L+ + LL+D++ +K D +I
Sbjct: 69 DNKRLVDLPGYGYAKVSEAIKKQWQSEMENYLTSRKCLEGIVLLVDSRHELKEFDSLMIE 128
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++LTK D + + A+ IE LK
Sbjct: 129 MAISFDLNLHILLTKADKLNNKERAQANKMIESFLK 164
>gi|374340488|ref|YP_005097224.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Marinitoga
piezophila KA3]
gi|372102022|gb|AEX85926.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Marinitoga
piezophila KA3]
Length = 192
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 9/195 (4%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGV--VRTSDKPGLTQTI 60
K+E A +P EIAFAGRSNVGKSS+LN L +G+ + S PG T++I
Sbjct: 4 KIELVKTAYTKGDYPPILNAEIAFAGRSNVGKSSLLNKL---FGIKIAKISSNPGKTRSI 60
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + K LVDLPGYGFA + K W +L+++Y R SL+ V LLID + + +
Sbjct: 61 NFYNVDNKGYLVDLPGYGFANVSKSEKKKWADLMEDYFKNRYSLQMVFLLIDHRHEPQKK 120
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL-KANNSLVQPVMMVSSKSG 179
D E+I ++ + + +VLTK D + + ++ I+ L K + + P VSSK+G
Sbjct: 121 DIEMIQWLKELEIPFMIVLTKLDKLKKNERVKQLNLIKSHLSKYGDYIYFP---VSSKTG 177
Query: 180 AGIRSLRTVLSKIAR 194
GI L+ + K +
Sbjct: 178 EGIGQLKNEIIKFLK 192
>gi|417692307|ref|ZP_12341505.1| putative GTP-binding protein [Shigella boydii 5216-82]
gi|332084079|gb|EGI89284.1| putative GTP-binding protein [Shigella boydii 5216-82]
Length = 210
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ CLVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKCLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|288553615|ref|YP_003425550.1| GTP-binding protein YsxC [Bacillus pseudofirmus OF4]
gi|288544775|gb|ADC48658.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pseudofirmus
OF4]
Length = 195
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E F A +P LPEIA AGRSNVGKSS +N + + + RTS +PG TQT+
Sbjct: 3 VTKAELFTVAVKPEQYPNTPLPEIALAGRSNVGKSSFINKMINRKSLARTSQRPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + +L VD+PGYGFA ++ ++AW ++++ Y+ R L+ V LID +
Sbjct: 63 NFYAINEQLHFVDVPGYGFAKVSKKEREAWGKMIETYIQQREQLRAVVQLIDVRHKPTED 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + ++ V+ TK D + + I E L + P+++ SS+SG
Sbjct: 123 DKLMYEWLKHFDIPVIVIATKCDKIPKGKWQKHLRVISEELSKHEE--DPLLLFSSESGH 180
Query: 181 G 181
G
Sbjct: 181 G 181
>gi|150026105|ref|YP_001296931.1| ribosome biogenesis GTP-binding protein YsxC [Flavobacterium
psychrophilum JIP02/86]
gi|166225953|sp|A6H1A5.1|ENGB_FLAPJ RecName: Full=Probable GTP-binding protein EngB
gi|149772646|emb|CAL44129.1| Probable GTP-binding protein EngB [Flavobacterium psychrophilum
JIP02/86]
Length = 205
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + + S P LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 3 INTAEFIISNSIVSLCPQEHLPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A ++ K+ +++ + +Y R L +LID + +
Sbjct: 63 NHFKINNNWFLVDLPGYGYAKVSKKTKEVFQQFITDYFEKREQLVCAFVLIDIRHEAQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKS-G 179
D E I+ + + + +V TK D + VA+ +L NN P V+S +
Sbjct: 123 DLEFITYLGEIELPFCIVFTKADKISKGKVAQHVAAYRTALLKNNWEEMPHHFVTSATEH 182
Query: 180 AGIRSLRTVLSKIAR 194
G SL + + ++ +
Sbjct: 183 TGKESLLSYIDEVNQ 197
>gi|268319666|ref|YP_003293322.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785]
gi|262398041|emb|CAX67055.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785]
Length = 194
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE A AGRSNVGKSS++N + + + RTS +PG TQT+NF+K
Sbjct: 7 EFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L LVD+PGYG+A ++ + A+ E++++Y+ TR LK + LL+D + D +
Sbjct: 67 VNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTADDINM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ VV TK D + ++ ++ +I +SL
Sbjct: 127 FNYALYLDIPILVVATKMDKLKKMEASQIKQKISKSL 163
>gi|329897111|ref|ZP_08271856.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088]
gi|328921435|gb|EGG28824.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088]
Length = 211
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 92/158 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF A+A PA E+AFAGRSN GKSS +N+LT+ + RTS PG TQ +NFF
Sbjct: 19 EFLASAAKFHQCPADLGWEVAFAGRSNAGKSSAINSLTKNKKLARTSKTPGRTQLLNFFS 78
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L + LVDLPGYGFA +K AW E ++ Y+ R SLK + LL+D + ++P D +L
Sbjct: 79 LSEQQRLVDLPGYGFAKVPVAMKKAWTEQLETYLQERASLKGLILLMDIRHPLQPFDEQL 138
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
I+ + ++LTK D + +Q+E+ LK
Sbjct: 139 INWALSADMPCHILLTKADKLKRGPQQSTKLQVEKVLK 176
>gi|146329655|ref|YP_001209308.1| GTPase [Dichelobacter nodosus VCS1703A]
gi|146233125|gb|ABQ14103.1| GTPase [Dichelobacter nodosus VCS1703A]
Length = 199
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 12/192 (6%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F + + P + E+AFAGRSN GKSS LNALT Q + R S PG TQ IN+F L
Sbjct: 10 FSCSVHAAHQLPKDAVVEVAFAGRSNAGKSSALNALTNQATLARVSKTPGRTQLINYFAL 69
Query: 66 -GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LVDLPGYG+A + V+ WE L+ +Y+ TR +LK V L++D + +KP D +L
Sbjct: 70 PDAGKYLVDLPGYGYAQVPDAVRQHWEHLLGDYLLTRQALKGVVLIMDIRHPLKPLDQQL 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-----PVMMVSSKSG 179
+ + V+LTK D +++ A +++++ + N L Q V SS
Sbjct: 130 LDCCQARALPVHVLLTKADK-----LSKSAQKMQQN-QVANFLAQRMESSSVQTFSSLKK 183
Query: 180 AGIRSLRTVLSK 191
G+ +LR L +
Sbjct: 184 EGLDALRCQLDQ 195
>gi|381187404|ref|ZP_09894968.1| GTP-binding protein EngB [Flavobacterium frigoris PS1]
gi|379650532|gb|EIA09103.1| GTP-binding protein EngB [Flavobacterium frigoris PS1]
Length = 206
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 1/195 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + S P LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 3 INTAEFVISNSDVSKCPKDFLPEYAFIGRSNVGKSSLINMLTNHKKLAKTSGRPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F + LVDLPGYG+A ++ K +++ + +Y TR L +LID + +
Sbjct: 63 NHFIINNNWFLVDLPGYGYAKVSKKTKSVFQQFITDYFETREQLVCAFVLIDIRHEAQAI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E +S M S+ + +V TK D + + + ++++ ANN P V+S + +
Sbjct: 123 DIEFMSYMGESEIPFCIVFTKADKISKVKIDSHIAAYKKNMFANNWAEMPHYFVTSATES 182
Query: 181 -GIRSLRTVLSKIAR 194
G L T + ++ +
Sbjct: 183 LGKEELLTYIEEVNQ 197
>gi|381182038|ref|ZP_09890862.1| GTP-binding protein YsxC [Listeriaceae bacterium TTU M1-001]
gi|380318071|gb|EIA21366.1| GTP-binding protein YsxC [Listeriaceae bacterium TTU M1-001]
Length = 194
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N +E +A +PA LPE A AGRSNVGKSS +N + R+ + R S KPG TQT+
Sbjct: 3 VNNVELVISAVWQEQYPADSLPEFALAGRSNVGKSSFINKMIRRKSMARISQKPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ L VD+PGYGFA + ++ W E+++ Y+++R L+ V +ID +
Sbjct: 63 NFYKIEETLYFVDVPGYGFAKVSKREREKWGEMIETYITSREQLRAVIQIIDLRHKPTND 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + ++ Q +V TK D + + A + E+L + +M SS++G
Sbjct: 123 DVMMYEFLKYYQIPVIIVATKADKIPRSKWQKHAKIVRETLDFDKE--DDFVMFSSETGM 180
Query: 181 G 181
G
Sbjct: 181 G 181
>gi|78186100|ref|YP_374143.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium luteolum
DSM 273]
gi|119369228|sp|Q3B6D1.1|ENGB_PELLD RecName: Full=Probable GTP-binding protein EngB
gi|78166002|gb|ABB23100.1| GTP-binding protein [Chlorobium luteolum DSM 273]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
P +PEI FAGRSNVGKSS+LN+LT + G+ +TS PG T+ +N+F + L VD+P
Sbjct: 18 LPDERVPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRLLNYFLINDDLYFVDIP 77
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A KDAW L+ YV R ++ V LL+D++ D E++ + Y
Sbjct: 78 GYGYAAVSHTEKDAWGRLLAGYVGGRQAIALVVLLLDSRHPAMESDREMMEFLAYHDRPY 137
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+VLTK D + + A +A ++ S N + ++ SS SG G + L
Sbjct: 138 GIVLTKDDKLTQKERA-KAKRVTASCALN---AEFIVSYSSISGKGKKEL 183
>gi|383936538|ref|ZP_09989963.1| GTP-binding protein [Rheinheimera nanhaiensis E407-8]
gi|383702458|dbj|GAB60054.1| GTP-binding protein [Rheinheimera nanhaiensis E407-8]
Length = 209
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 1/184 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A ++ PA E+AFAGRSN GKSS LN LTRQ + RTS PG TQ IN F L
Sbjct: 13 FLTSAPDINALPADSGIEVAFAGRSNAGKSSALNTLTRQNSLARTSKTPGRTQLINTFSL 72
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ L+DLPGYGFA +K+ W++ + EY+ R SLK + +L+D + +K D +L+
Sbjct: 73 DNQRRLIDLPGYGFAKVPLAIKEKWQKSLAEYLMKRDSLKGLVVLMDIRHPLKDLDQDLV 132
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+S+ ++LTK D + P + +++ E+ A V V SS + G+ L
Sbjct: 133 HWAVQSELPVLILLTKADKLGPGARKKTLLEVREASLAFMGDVT-VHTFSSLNKQGLTEL 191
Query: 186 RTVL 189
VL
Sbjct: 192 EQVL 195
>gi|392411031|ref|YP_006447638.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfomonile
tiedjei DSM 6799]
gi|390624167|gb|AFM25374.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfomonile
tiedjei DSM 6799]
Length = 192
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EFF AA+ +P + E+AFAGRSNVGKSSM+N L + +VRTS PG T+ +NF+
Sbjct: 7 EFFRAAEEKKDYPPGEYSELAFAGRSNVGKSSMINTLLGRRNLVRTSKTPGHTRKLNFYL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L VDLPGYGFA EV++ W +V+ Y++ R L V +++D + D L
Sbjct: 67 INGRLYFVDLPGYGFAKVPLEVREKWRPMVETYLTGRRQLAGVVVIVDARRPPTESDMSL 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I ++ V TK D + +A + I +++ + P++ S+ +G G
Sbjct: 127 IEFLQAYDKPLIVAATKADKLTRNQMAEQKRTIRSAIQMD----VPIVFFSALNGLGKNE 182
Query: 185 LRTVLSKI 192
L + KI
Sbjct: 183 LWKEIKKI 190
>gi|218509358|ref|ZP_03507236.1| GTPase EngB [Rhizobium etli Brasil 5]
Length = 175
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 102/172 (59%), Gaps = 9/172 (5%)
Query: 34 KSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGTKL---CLVDLPGYGFAYAKE 84
KSS++NAL Q G+ RTS+ PG TQ +N+F G L +VD+PGYG+A A +
Sbjct: 1 KSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPK 60
Query: 85 EVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTDT 144
E D W +LV +Y+ R +LKRV +LID++ G+K D ++++L++++ YQ+VLTKTD
Sbjct: 61 EQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEDVLTLLDKAAVSYQLVLTKTDK 120
Query: 145 VFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARFA 196
+ V + + + ++ + V+ SS+ G G+ LR +++ A
Sbjct: 121 IKAPAVPKLLAETADKIRKRPAAYPAVLSTSSEKGDGLDDLRQAIAQTVGIA 172
>gi|297581847|ref|ZP_06943768.1| GTPase EngB [Vibrio cholerae RC385]
gi|297533941|gb|EFH72781.1| GTPase EngB [Vibrio cholerae RC385]
Length = 220
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I + QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECEIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|408421058|ref|YP_006762472.1| GTP-binding protein EngB [Desulfobacula toluolica Tol2]
gi|405108271|emb|CCK81768.1| EngB: GTP-binding protein [Desulfobacula toluolica Tol2]
Length = 197
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 107/178 (60%), Gaps = 3/178 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++F +A S +P D PEIAFAGRSNVGKSS++N L ++ +V+TS KPG TQ INFF
Sbjct: 6 VQFVKSAVKPSQYPEYDFPEIAFAGRSNVGKSSLINTLIQRKDMVKTSSKPGCTQLINFF 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ L VDLPGYG+A ++++ W+ +V+ Y+S R +L + LLID + + + +
Sbjct: 66 MINEILSFVDLPGYGYAKVSKKIRAQWQPMVELYLSHRQNLLGLILLIDIRRDPQKEEFD 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ +E Y V+LTK+D + + +R + I L + V++ S+K+ G
Sbjct: 126 MMDWLETHDIPYLVILTKSDKLSKTNQQKRLLSICTRLGREKN---GVILFSTKTKQG 180
>gi|42518938|ref|NP_964868.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
johnsonii NCC 533]
gi|385826074|ref|YP_005862416.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026]
gi|38606910|gb|AAR25449.1| GTP binding protein [Lactobacillus johnsonii]
gi|41583225|gb|AAS08834.1| probable GTP-binding protein EngB [Lactobacillus johnsonii NCC 533]
gi|329667518|gb|AEB93466.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026]
Length = 194
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE A AGRSNVGKSS++N + + + RTS +PG TQT+NF+K
Sbjct: 7 EFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L LVD+PGYG+A ++ + A+ E++++Y+ TR LK + LL+D + D +
Sbjct: 67 VNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTADDINM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ VV TK D + ++ ++ +I +SL
Sbjct: 127 FNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL 163
>gi|295092437|emb|CBK78544.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium cf.
saccharolyticum K10]
Length = 205
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 90/161 (55%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K++ V+S PA PE AFAG+SNVGKSS++NAL + RTS +PG TQTI
Sbjct: 3 IKKVDLETVCGVTSRLPANTQPEFAFAGKSNVGKSSLINALMNRKSYARTSAQPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + L VDLPGYG+A A EEVK W ++++ Y+ LK V LLID +
Sbjct: 63 NFYHINDALYYVDLPGYGYARANEEVKAKWGKMIENYLHKSPMLKCVFLLIDIRHEPSEN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
D + S ++ + ++ TK D + VA+ + L
Sbjct: 123 DRLMYSWIQNQGYRPVIIATKLDKLKRSQVAKHVKMVRTGL 163
>gi|167769426|ref|ZP_02441479.1| hypothetical protein ANACOL_00756 [Anaerotruncus colihominis DSM
17241]
gi|167668394|gb|EDS12524.1| ribosome biogenesis GTP-binding protein YsxC [Anaerotruncus
colihominis DSM 17241]
Length = 202
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ ++F + ++ P +LPEIAFAGRSNVGKSSM+N L + + R S PG T TIN
Sbjct: 4 HNVKFETSFGTAAQLPPSELPEIAFAGRSNVGKSSMINKLFNRKQLARVSAVPGKTATIN 63
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+ L DLPGYG+A + K W EL+ Y L+ V LID + D
Sbjct: 64 FFR-ADGLRFADLPGYGYAKVSKGEKRRWSELISGYFEQDRDLRLVFQLIDMRHAPTAGD 122
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+I+ M + + VVLTK D + A R +E L + +V + SS++G G
Sbjct: 123 LTMINYMIDREIPFVVVLTKADKLSKTQRAVRLAALETELPCADQIV--TIPFSSETGEG 180
Query: 182 IRSLRTVLSKIAR 194
+ ++R V+++I R
Sbjct: 181 VDAVRDVVAQIER 193
>gi|227889796|ref|ZP_04007601.1| GTPase [Lactobacillus johnsonii ATCC 33200]
gi|227849660|gb|EEJ59746.1| GTPase [Lactobacillus johnsonii ATCC 33200]
Length = 194
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE A AGRSNVGKSS++N + + + RTS +PG TQT+NF+K
Sbjct: 7 EFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L LVD+PGYG+A ++ + A+ E++++Y+ TR LK + LL+D + D +
Sbjct: 67 VNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTADDINM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ VV TK D + ++ ++ +I +SL
Sbjct: 127 FNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL 163
>gi|160893845|ref|ZP_02074628.1| hypothetical protein CLOL250_01399 [Clostridium sp. L2-50]
gi|156864497|gb|EDO57928.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
L2-50]
Length = 201
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 7/167 (4%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E ++S+ P ++PEIAFAG+SNVGKSS++N L + + RTS +PG TQTIN++
Sbjct: 7 ELETVCGITSTLPETEMPEIAFAGKSNVGKSSLINGLLNRKSLARTSSQPGKTQTINYYN 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VDLPGYG+A E++ W ++V+ Y+ T L+ V LLID + +P +++
Sbjct: 67 INHDLYFVDLPGYGYAQVSVEIRAKWGKMVERYLHTSKQLRLVFLLIDIRH--EPSENDC 124
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPV 171
I + Y+ V+ T +D +R+ QI+++LK +QPV
Sbjct: 125 IMYDWIVKNGYEPVIIATK----LDKIKRS-QIQKNLKIIRQKIQPV 166
>gi|167748794|ref|ZP_02420921.1| hypothetical protein ANACAC_03568 [Anaerostipes caccae DSM 14662]
gi|167651764|gb|EDR95893.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes caccae
DSM 14662]
Length = 204
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 2/170 (1%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P +LPE+AFAG+SNVGKSS++NAL + R S +PG TQTIN++ + +L
Sbjct: 14 ITSKLPDNELPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTINYYNINEELYY 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A E VK+ W +++ Y+ T LK V LLID + D + + +
Sbjct: 74 VDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKNDVMMYDWIVHN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ TK+D + + + +I + L+ N PV SS S G
Sbjct: 134 GYHPVIIATKSDKLKRSQLPKHVKEIRQELRLNKE--TPVFPFSSLSKQG 181
>gi|395803407|ref|ZP_10482654.1| GTP-binding protein YsxC [Flavobacterium sp. F52]
gi|395434453|gb|EJG00400.1| GTP-binding protein YsxC [Flavobacterium sp. F52]
Length = 206
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 93/176 (52%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + +S P LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 3 INTAEFIVSNSDASKCPKDFLPEYAFIGRSNVGKSSLINMLTNNKNLAKTSARPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A ++ K +++ + +Y R L +LID + +
Sbjct: 63 NHFKINNNWFLVDLPGYGYAKVSKKTKSVFQKFITDYFENREQLVCAFVLIDIRHEAQNI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
D E +S M S+ + ++ TK D + + ++ + ANN P V+S
Sbjct: 123 DIEFMSYMGESEIPFCIIFTKADKIGKTKIDSHIAAYKKQMFANNWAEMPQYFVTS 178
>gi|374334346|ref|YP_005091033.1| GTP-binding protein YsxC [Oceanimonas sp. GK1]
gi|372984033|gb|AEY00283.1| GTP-binding protein YsxC [Oceanimonas sp. GK1]
Length = 211
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 6/195 (3%)
Query: 2 NKLEFFAAAKVSSS-----FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGL 56
NK+ F AA ++S+ PA EIAFAGRSN GKSS LN +T+Q + RTS PG
Sbjct: 4 NKINFNAAHFITSAPNIRQMPADTGVEIAFAGRSNAGKSSALNTITQQKSLARTSKTPGR 63
Query: 57 TQTINFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
TQ IN F+L L+DLPGYG+A EE+K W+E + EY+ R SLK + +L+D +
Sbjct: 64 TQLINVFELSEGKRLIDLPGYGYAKVPEEMKLKWQEALSEYLQQRTSLKGLVVLMDIRHP 123
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+K D +L+ + +LTK D + +++ E++ ++ V SS
Sbjct: 124 LKDIDQQLLQWASDCELPVLALLTKCDKLKSGARKAEVLRVREAVAIFGGNIR-VEAFSS 182
Query: 177 KSGAGIRSLRTVLSK 191
G G+ + VL++
Sbjct: 183 LKGLGVDQAKEVLTE 197
>gi|409097338|ref|ZP_11217362.1| HSR1-like GTP-binding protein [Pedobacter agri PB92]
Length = 207
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S+ P P +PE AF GRSNVGKSS++N L Q G+ +TS +PG TQ IN F + K +VD
Sbjct: 16 SALPPPTMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLINHFLVNEKWYIVD 75
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
LPGYG+A + ++ WE+ ++ Y++ R SL+ V +LID++ + D E + Q
Sbjct: 76 LPGYGYAKVSKTSREKWEKFIRAYITKRESLQCVFVLIDSRLDPQQIDIEFCYWLGEKQI 135
Query: 134 KYQVVLTKTD 143
+ ++ TK D
Sbjct: 136 PFSLIFTKAD 145
>gi|336450404|ref|ZP_08620855.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Idiomarina sp.
A28L]
gi|336282799|gb|EGN76020.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Idiomarina sp.
A28L]
Length = 213
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
K F +A P + E+AFAGRSN GKSS LN LTRQ + RTS PG TQ IN
Sbjct: 9 QKAHFTISAPDIRHLPPDEGMEVAFAGRSNAGKSSALNVLTRQKSLARTSKTPGRTQQIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F L L+DLPGYGFA +K W+E + EY+ R L+ + +L+D + +K D
Sbjct: 69 VFALDDHRRLIDLPGYGFAQVPLAMKLKWQEALSEYLEKRKCLRGLVVLMDVRHPMKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
ELI S VVLTK D + MQI+E++ V V++ SS + +G
Sbjct: 129 QELIHWAVASDLPVLVVLTKIDKLRSGQRKEALMQIQEAIPGFGGDVS-VILFSSLNKSG 187
Query: 182 IRSLRTVL 189
+ L L
Sbjct: 188 LPELEQKL 195
>gi|239907036|ref|YP_002953777.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
magneticus RS-1]
gi|239796902|dbj|BAH75891.1| probable GTP-binding protein EngB [Desulfovibrio magneticus RS-1]
Length = 208
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 11/194 (5%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
L + A +S+ P D P+IA AGRSNVGKS+++N L + + +TS PG T+++NF+
Sbjct: 13 LTLLSTAYLSNQLPTLDAPQIALAGRSNVGKSTLINCLAGRKSLAKTSATPGKTRSLNFY 72
Query: 64 KLGTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
T+ CLVDLPGYG+A +E +D W +L++ Y++T +L+ V LID + + D
Sbjct: 73 MAETQGYCLVDLPGYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDM 132
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPV---MMVSSKSG 179
EL+S + + V LTK + V D R + E L QP ++ S K+G
Sbjct: 133 ELVSWLRSRRIPVLVALTKAEKVPQRDREARKKEWRE-------LAQPAFPPVVFSGKTG 185
Query: 180 AGIRSLRTVLSKIA 193
G +L V ++ A
Sbjct: 186 LGREALCRVFAEAA 199
>gi|313113614|ref|ZP_07799202.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624129|gb|EFQ07496.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 199
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 13/194 (6%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK +F A+ +SS P D PE++F+GRSNVGKSS++N L + + R S PG T TIN
Sbjct: 4 NKADFIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCSRKNLARVSSTPGKTATIN 63
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+ + VDLPGYG+A ++ W++L+ Y + L+D + D
Sbjct: 64 FYSV-DDCYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLVQLLDCRHAPSADD 122
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-----VMMVSS 176
+++ + Q Y V LTK D + + Q+ ++L+ +L +P V++ S
Sbjct: 123 EQMLRYLHYHQIPYVVALTKADKL-------KKSQLAKTLEDFENLCRPYGCQKVVLTSG 175
Query: 177 KSGAGIRSLRTVLS 190
++G GI L+ VL+
Sbjct: 176 ENGYGIPELQAVLN 189
>gi|300361499|ref|ZP_07057676.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
JV-V03]
gi|300354118|gb|EFJ69989.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
JV-V03]
Length = 194
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE A AGRSNVGKSS++N + + + RTS +PG TQT+NF+K
Sbjct: 7 EFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L LVD+PGYG+A ++ + A+ E++++Y+ TR LK + LL+D + D +
Sbjct: 67 VNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLVLLVDARHDPTADDINM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ VV TK D + ++ ++ +I +SL
Sbjct: 127 FNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL 163
>gi|167627772|ref|YP_001678272.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|189037179|sp|B0TZB8.1|ENGB_FRAP2 RecName: Full=Probable GTP-binding protein EngB
gi|167597773|gb|ABZ87771.1| ATP/GTP-binding protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 197
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
AAKVS P E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 10 MGAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLG 68
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVDLPGYG+A E +K W+ ++ Y++TR L + LL+D++ +K D +I
Sbjct: 69 DNKRLVDLPGYGYAKVSEAIKKQWQSEMENYLTTRKCLGGIVLLVDSRHELKEFDSLMIE 128
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++LTK D + + A+ IE LK
Sbjct: 129 MAISFDLNLHILLTKADKLNNKERAQANKMIESFLK 164
>gi|118586682|ref|ZP_01544120.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
gi|118432867|gb|EAV39595.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
Length = 198
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
+PA +L EIAF GRSNVGKSS++N L + G+ TS +PG TQT+NF+ L KL VD+P
Sbjct: 18 YPAGNLSEIAFVGRSNVGKSSLINTLIERNGLAHTSGQPGKTQTLNFYNLDEKLFFVDVP 77
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A + ++ + +V+EY+S+R LK V LID + D + + +E Q
Sbjct: 78 GYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDARHEPTEDDKLMYNWLEYYQVPI 137
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNS 166
+V TK D V QI+++LK N++
Sbjct: 138 LIVATKADKVASGKFNAVESQIKKTLKFNST 168
>gi|116629800|ref|YP_814972.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
ATCC 33323]
gi|238853431|ref|ZP_04643810.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
202-4]
gi|282851696|ref|ZP_06261061.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
224-1]
gi|311110559|ref|ZP_07711956.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
MV-22]
gi|420148371|ref|ZP_14655639.1| Putative GTP-binding protein EngB [Lactobacillus gasseri CECT 5714]
gi|122273262|sp|Q042T8.1|ENGB_LACGA RecName: Full=Probable GTP-binding protein EngB
gi|116095382|gb|ABJ60534.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
gi|238834003|gb|EEQ26261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
202-4]
gi|282557664|gb|EFB63261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
224-1]
gi|311065713|gb|EFQ46053.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
MV-22]
gi|398399923|gb|EJN53519.1| Putative GTP-binding protein EngB [Lactobacillus gasseri CECT 5714]
Length = 194
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P DLPE A AGRSNVGKSS++N + + + RTS +PG TQT+NF+K
Sbjct: 7 EFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L LVD+PGYG+A ++ + A+ E++++Y+ TR LK + LL+D + D +
Sbjct: 67 VNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHDPTADDINM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ VV TK D + ++ ++ +I +SL
Sbjct: 127 FNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL 163
>gi|262172870|ref|ZP_06040548.1| GTP-binding protein EngB [Vibrio mimicus MB-451]
gi|261893946|gb|EEY39932.1| GTP-binding protein EngB [Vibrio mimicus MB-451]
Length = 219
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VAEGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K VQ V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKNFGGDVQ-VDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDQ 196
>gi|146299560|ref|YP_001194151.1| ribosome biogenesis GTP-binding protein YsxC [Flavobacterium
johnsoniae UW101]
gi|189037178|sp|A5FIZ1.1|ENGB_FLAJ1 RecName: Full=Probable GTP-binding protein EngB
gi|146153978|gb|ABQ04832.1| GTP-binding protein, HSR1-related [Flavobacterium johnsoniae UW101]
Length = 210
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + ++ P LPE AF GRSNVGKSS++N +T + +TS KPG TQ I
Sbjct: 3 INTAEFIVSNSDAAKCPKDFLPEYAFIGRSNVGKSSLINMITNHKNLAKTSGKPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A ++ K +++ + +Y R L +LID + +
Sbjct: 63 NHFKINNNWFLVDLPGYGYAKVSKKTKSIFQQFITDYFENREQLVCAFVLIDIRHEAQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV-SSKSG 179
D E +S M S+ + ++ TK D + + + + ANN P V SS
Sbjct: 123 DIEFMSYMGESEIPFCIIFTKADKISKGKIDSHIAAYRKQMYANNWAEMPQYFVTSSTES 182
Query: 180 AGIRSLRTVLSKIAR 194
G L T + ++ +
Sbjct: 183 IGKDELLTYIDEVNQ 197
>gi|357040205|ref|ZP_09101994.1| GTP-binding protein engB [Desulfotomaculum gibsoniae DSM 7213]
gi|355356869|gb|EHG04650.1| GTP-binding protein engB [Desulfotomaculum gibsoniae DSM 7213]
Length = 202
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F +A PA PE+A AGRSNVGKSS+ N L + + RTS+ PG TQ INFF
Sbjct: 7 DFVTSATNLDKCPAGSHPEVALAGRSNVGKSSLFNVLVNRKRLARTSNTPGRTQLINFFI 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL LVDLPGYGFA VK W ++++ Y++ R L+ V LL+D + D ++
Sbjct: 67 INDKLHLVDLPGYGFAKVPVRVKAQWGKMIEGYLAGREQLRGVILLVDVRHKPTQDDQQM 126
Query: 125 ISLMERSQTKYQVVLTKTD------TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKS 178
+ ++ + VV TK D + + V R+ +Q+ ++ P+++ S+ +
Sbjct: 127 YNWLKAYRIPTAVVATKADKLSRGRAIQNLAVVRKNLQLADA--------DPLVLFSAVT 178
Query: 179 GAGIRSLRTVL 189
G G + T++
Sbjct: 179 GQGKEDILTII 189
>gi|340385210|ref|XP_003391103.1| PREDICTED: probable GTP-binding protein EngB-like [Amphimedon
queenslandica]
Length = 215
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A FPA + E+AFAGRSN GKSS++NAL R+ + RTS PG T+ INFF +
Sbjct: 9 FLVSASRVRDFPADEGLEVAFAGRSNAGKSSLINALCRRKALARTSRTPGRTRLINFFSV 68
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
L LVDLPGYG+A A + +AW LV+EY+ R SL + LL+D + + D ++
Sbjct: 69 ADSLRLVDLPGYGYAKAPRSMSEAWGRLVEEYLQGRRSLAGLVLLMDIRHPLTALDRIML 128
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEE 159
+ VVL+K D + RR M I+E
Sbjct: 129 NGCRLGGIPLLVVLSKADK---LASKRRIMAIKE 159
>gi|116490352|ref|YP_809896.1| GTPase [Oenococcus oeni PSU-1]
gi|290889749|ref|ZP_06552837.1| hypothetical protein AWRIB429_0227 [Oenococcus oeni AWRIB429]
gi|419757765|ref|ZP_14284092.1| GTPase [Oenococcus oeni AWRIB304]
gi|419856885|ref|ZP_14379603.1| GTPase [Oenococcus oeni AWRIB202]
gi|421185155|ref|ZP_15642567.1| GTPase [Oenococcus oeni AWRIB318]
gi|421187799|ref|ZP_15645142.1| GTPase [Oenococcus oeni AWRIB419]
gi|421190224|ref|ZP_15647528.1| GTPase [Oenococcus oeni AWRIB422]
gi|421192205|ref|ZP_15649474.1| GTPase [Oenococcus oeni AWRIB548]
gi|421195923|ref|ZP_15653124.1| GTPase [Oenococcus oeni AWRIB568]
gi|421196175|ref|ZP_15653365.1| GTPase [Oenococcus oeni AWRIB576]
gi|122277459|sp|Q04H41.1|ENGB_OENOB RecName: Full=Probable GTP-binding protein EngB
gi|116091077|gb|ABJ56231.1| Predicted GTPase [Oenococcus oeni PSU-1]
gi|290480573|gb|EFD89209.1| hypothetical protein AWRIB429_0227 [Oenococcus oeni AWRIB429]
gi|399905479|gb|EJN92920.1| GTPase [Oenococcus oeni AWRIB304]
gi|399964909|gb|EJN99541.1| GTPase [Oenococcus oeni AWRIB318]
gi|399966776|gb|EJO01282.1| GTPase [Oenococcus oeni AWRIB419]
gi|399970152|gb|EJO04458.1| GTPase [Oenococcus oeni AWRIB548]
gi|399971024|gb|EJO05314.1| GTPase [Oenococcus oeni AWRIB422]
gi|399974702|gb|EJO08786.1| GTPase [Oenococcus oeni AWRIB568]
gi|399977785|gb|EJO11757.1| GTPase [Oenococcus oeni AWRIB576]
gi|410498958|gb|EKP90399.1| GTPase [Oenococcus oeni AWRIB202]
Length = 198
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
+PA +L EIAF GRSNVGKSS++N L + G+ TS +PG TQT+NF+ L KL VD+P
Sbjct: 18 YPAGNLSEIAFVGRSNVGKSSLINTLIERNGLAHTSGQPGKTQTLNFYNLDEKLFFVDVP 77
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A + ++ + +V+EY+S+R LK V LID + D + + +E Q
Sbjct: 78 GYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDARHEPTEDDKLMYNWLEYYQVPI 137
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNS 166
+V TK D V QI+++LK N++
Sbjct: 138 LIVATKADKVASGKFNAVESQIKKTLKFNST 168
>gi|339444619|ref|YP_004710623.1| putative GTPase [Eggerthella sp. YY7918]
gi|338904371|dbj|BAK44222.1| predicted GTPase [Eggerthella sp. YY7918]
Length = 193
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 21/191 (10%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL-GTKLC 70
+SS P +PEIAFAGRSNVGKSS+LN L + G+ + S PG T TINFF + G +
Sbjct: 14 ISSQLPPSTVPEIAFAGRSNVGKSSLLNKLFNRKGLAKVSQTPGKTATINFFAVDGAR-- 71
Query: 71 LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMER 130
LVDLPGYG+A + K W EL++ Y + + V L+D + D +I ++
Sbjct: 72 LVDLPGYGYAQVAKSEKHRWSELIEGYFNQDRNFALVVSLVDIRHAASDLDENMIGFLQE 131
Query: 131 SQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ--------PVMMVSSKSGAGI 182
+ + V LTK D + ++ +K +LV+ P+++ SS +G GI
Sbjct: 132 AGLPFAVALTKADK----------LSRQQQMKQKAALVKQLDLDADTPLVVCSSANGTGI 181
Query: 183 RSLRTVLSKIA 193
LR ++ A
Sbjct: 182 DELRALIKSAA 192
>gi|313884146|ref|ZP_07817912.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620593|gb|EFR32016.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola
ACS-139-V-Col8]
Length = 198
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P LPE+A AGRSNVGKSS +N+L + + RTS +PG TQT+NF+
Sbjct: 7 ELVISAVNPSQYPQDQLPEVALAGRSNVGKSSFINSLIARKNLARTSSQPGKTQTLNFYA 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ VD+PGYG+A ++ + AW +++++Y+S R +++ + LL+D + D E+
Sbjct: 67 INQAFRFVDVPGYGYARVSKDFRLAWSKMIEKYLSQRENMELLFLLMDMRHEPTRLDREM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
E Y +VLTK D + P + +++L+ + V + S+ G G
Sbjct: 127 KDFAENLDLPYAIVLTKADKIKPASWNKHLSMYKKALELPS--VDALFPYSATKGYGKEE 184
Query: 185 LRTVLSKI 192
+ V+S +
Sbjct: 185 IWDVISSV 192
>gi|410027630|ref|ZP_11277466.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Marinilabilia
sp. AK2]
Length = 202
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
PAP +PE AF GRSNVGKSS++N LT + +TS KPG TQ IN F + LVDLPG
Sbjct: 18 PAPVMPEFAFIGRSNVGKSSLVNMLTNNKNLAKTSGKPGKTQLINHFLINDNWYLVDLPG 77
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YGFA + ++ WE+++ +Y+ R +L VC+LID++ + D E I+ + +
Sbjct: 78 YGFAKVSKSIQSTWEKMISDYLIHRENLVAVCVLIDSRLDPQKIDLEFITWCGEQEIPFV 137
Query: 137 VVLTKTD 143
++ TK+D
Sbjct: 138 LIFTKSD 144
>gi|89256263|ref|YP_513625.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. holarctica LVS]
gi|115314717|ref|YP_763440.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. holarctica OSU18]
gi|118497636|ref|YP_898686.1| ribosome biogenesis GTP-binding protein YsxC [Francisella novicida
U112]
gi|134302057|ref|YP_001122026.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. tularensis WY96-3418]
gi|169656584|ref|YP_001428389.2| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|187931483|ref|YP_001891467.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. mediasiatica FSC147]
gi|195536337|ref|ZP_03079344.1| ATP/GTP-binding protein [Francisella novicida FTE]
gi|208779438|ref|ZP_03246784.1| ATP/GTP-binding protein [Francisella novicida FTG]
gi|254367601|ref|ZP_04983622.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica
257]
gi|254369249|ref|ZP_04985261.1| hypothetical protein FTAG_00203 [Francisella tularensis subsp.
holarctica FSC022]
gi|290953603|ref|ZP_06558224.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. holarctica URFT1]
gi|385793019|ref|YP_005825995.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|421751871|ref|ZP_16188908.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
AS_713]
gi|421753726|ref|ZP_16190715.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
831]
gi|421757452|ref|ZP_16194332.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
80700103]
gi|421759309|ref|ZP_16196142.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
70102010]
gi|422938679|ref|YP_007011826.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. holarctica FSC200]
gi|423050611|ref|YP_007009045.1| GTP-binding protein YsxC [Francisella tularensis subsp. holarctica
F92]
gi|424674627|ref|ZP_18111543.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
70001275]
gi|119369197|sp|Q2A3S7.1|ENGB_FRATH RecName: Full=Probable GTP-binding protein EngB
gi|119369198|sp|Q0BM81.1|ENGB_FRATO RecName: Full=Probable GTP-binding protein EngB
gi|166225954|sp|A0Q6R7.1|ENGB_FRATN RecName: Full=Probable GTP-binding protein EngB
gi|166225955|sp|A4IYA4.1|ENGB_FRATW RecName: Full=Probable GTP-binding protein EngB
gi|172044104|sp|A7NBT0.2|ENGB_FRATF RecName: Full=Probable GTP-binding protein EngB
gi|238691555|sp|B2SG30.1|ENGB_FRATM RecName: Full=Probable GTP-binding protein EngB
gi|89144094|emb|CAJ79345.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica
LVS]
gi|115129616|gb|ABI82803.1| GTPase [Francisella tularensis subsp. holarctica OSU18]
gi|118423542|gb|ABK89932.1| ATP/GTP-binding protein [Francisella novicida U112]
gi|134049834|gb|ABO46905.1| GTP binding protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134253412|gb|EBA52506.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica
257]
gi|157122199|gb|EDO66339.1| hypothetical protein FTAG_00203 [Francisella tularensis subsp.
holarctica FSC022]
gi|164551652|gb|ABU61433.2| GTP-binding protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187712392|gb|ACD30689.1| ATP/GTP-binding protein [Francisella tularensis subsp. mediasiatica
FSC147]
gi|194372814|gb|EDX27525.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida
FTE]
gi|208745238|gb|EDZ91536.1| ATP/GTP-binding protein [Francisella novicida FTG]
gi|332678344|gb|AEE87473.1| GTP-binding protein EngB [Francisella cf. novicida Fx1]
gi|407293830|gb|AFT92736.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. holarctica FSC200]
gi|409086408|gb|EKM86527.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
831]
gi|409086598|gb|EKM86714.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
AS_713]
gi|409091035|gb|EKM91040.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
70102010]
gi|409092540|gb|EKM92511.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
80700103]
gi|417434671|gb|EKT89613.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
70001275]
gi|421951333|gb|AFX70582.1| GTP-binding protein YsxC [Francisella tularensis subsp. holarctica
F92]
Length = 197
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 8 AAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT 67
AAKVS P E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 11 GAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGN 69
Query: 68 KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISL 127
LVDLPGYG+A E +K W+ ++ Y+++R L + LL+D++ +K D +I +
Sbjct: 70 NNRLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDSRHELKEFDSLMIEM 129
Query: 128 MERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++LTK D + + A+ IE LK
Sbjct: 130 AISFDLNLHILLTKADKLNNKERAQANRMIESFLK 164
>gi|347530952|ref|YP_004837715.1| GTPase EngB [Roseburia hominis A2-183]
gi|345501100|gb|AEN95783.1| GTPase EngB [Roseburia hominis A2-183]
Length = 198
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P E+AFAG+SNVGKSS++NAL + + RTS +PG TQTINF+ + + L
Sbjct: 14 ITSKIPDTAYNEVAFAGKSNVGKSSLINALMNRKALARTSAQPGKTQTINFYNINDAMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A A EEVK W ++++ Y+ T LK V LLID + D + M
Sbjct: 74 VDLPGYGYAKASEEVKAKWGKMIENYLHTSKRLKAVFLLIDIRHDPSANDRMMYEWMVYQ 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV 174
++ TK D + + + I E L VQP M+
Sbjct: 134 GFAPIIIATKLDKIKRSQIQKNVKAIREGLG-----VQPGTMI 171
>gi|254876868|ref|ZP_05249578.1| ATP/GTP-binding protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842889|gb|EET21303.1| ATP/GTP-binding protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 197
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
AAKVS P E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 10 MGAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLG 68
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVDLPGYG+A E +K W+ ++ Y++TR L + LL+D++ +K D +I
Sbjct: 69 DNKRLVDLPGYGYAKVSEAIKKQWQSEMENYLTTRKCLGGIVLLVDSRHELKEFDSLMIE 128
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++LTK D + + A+ IE LK
Sbjct: 129 MAISFDLDLHILLTKADKLNNKERAQANKMIESFLK 164
>gi|307546852|ref|YP_003899331.1| GTPase EngB [Halomonas elongata DSM 2581]
gi|307218876|emb|CBV44146.1| GTPase EngB [Halomonas elongata DSM 2581]
Length = 206
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A + PA E+AFAGRSN GKSS +N LTRQ + RTS PG TQ INFF L
Sbjct: 11 FLTSAPTLAQCPADTGAEVAFAGRSNAGKSSAINVLTRQKALARTSKTPGRTQLINFFTL 70
Query: 66 G--TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
G T+L LVDLPGYG+A + VK W+ + +Y+ R SL+ + LL+D + + D
Sbjct: 71 GDDTELRLVDLPGYGYAKVPDSVKLEWQRHLADYLQRRTSLRGLVLLMDVRHPLTEFDQT 130
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
++ + ++LTK D + Q+ L+ LV + + S+ GI
Sbjct: 131 MLGWADEQDMPVHILLTKADKLKSGAAKNALQQVRSQLREWEDLVS-IQLFSALKKQGIE 189
Query: 184 SLRTVL 189
+ L
Sbjct: 190 EVHARL 195
>gi|393780146|ref|ZP_10368370.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 412 str. F0487]
gi|392608962|gb|EIW91789.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 412 str. F0487]
Length = 199
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + S P +LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ + LVDLPGYG+A +E K +++ + +Y R L +L+D + +
Sbjct: 62 NHFKIDSSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + +V TK D + P+ + R ++ L P + S+++
Sbjct: 122 DVEFMQWLGEHSIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYFITSAENKT 181
Query: 181 GIRSLRTVLSKIAR 194
G L + +I +
Sbjct: 182 GKEELTHYIEQINK 195
>gi|375129560|ref|YP_004991657.1| GTPase EngB [Vibrio furnissii NCTC 11218]
gi|315178731|gb|ADT85645.1| GTPase EngB [Vibrio furnissii NCTC 11218]
Length = 224
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPTDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VTEGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ QV+LTK D + + ++I E+ A VQ V SS +G G+
Sbjct: 131 VVWAVECGIPVQVLLTKADKLKSGARKAQVLKIREAALAFGGDVQ-VDAFSSHNGIGVDV 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRNKLD 195
>gi|160933533|ref|ZP_02080921.1| hypothetical protein CLOLEP_02379 [Clostridium leptum DSM 753]
gi|156867410|gb|EDO60782.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium leptum
DSM 753]
Length = 199
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 100/188 (53%), Gaps = 3/188 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F AA S PA DLPEI F+G+SNVGKSS++N L + + R S PG T TINF++L
Sbjct: 8 FELAAGRSGQLPAGDLPEIVFSGKSNVGKSSLINKLLNRKNLARVSATPGKTATINFYRL 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ LVDLPGYG+A K W ELV+ Y +L V L+D + D +I
Sbjct: 68 -DQARLVDLPGYGYAKVSLAEKKRWAELVEGYFQQERNLALVVQLVDMRHPPTKDDLHMI 126
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
+ + V LTK+D + + +R +EE+ L ++ SS +G G+ L
Sbjct: 127 EFLCDGGFPFLVALTKSDKLNQTERRQRLAALEEAFSDYEGLR--LIPFSSVTGEGVEEL 184
Query: 186 RTVLSKIA 193
R +LS +A
Sbjct: 185 REILSSVA 192
>gi|149917815|ref|ZP_01906310.1| GTP-binding protein [Plesiocystis pacifica SIR-1]
gi|149821335|gb|EDM80737.1| GTP-binding protein [Plesiocystis pacifica SIR-1]
Length = 264
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 112/204 (54%), Gaps = 18/204 (8%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL- 65
+A K++ PA DLPEIA AGRSNVGKSS+LNA T Q G+ R S PG T+ +NFF +
Sbjct: 30 LSAPKLADCPPA-DLPEIAVAGRSNVGKSSLLNAFTEQRGLARVSRTPGRTRLLNFFHMQ 88
Query: 66 --GTK-----LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVK 118
G + L VDLPGYGFA A+ EV+D++ +++ Y+ R +L + +LID + G K
Sbjct: 89 LAGPREAQVSLRWVDLPGYGFAKARREVRDSFGPMIESYLRQRDALGGLLVLIDARHGPK 148
Query: 119 PRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKS 178
D EL+ + TK D + A R + + +A + V++ S+ S
Sbjct: 149 DSDFELLEFCREISLPSLLCATKCDK---LGAAERGLLPKRFAEAMGIDPRDVLLTSASS 205
Query: 179 GAGIR------SLRTVLSKIARFA 196
G G+ +L L+++AR A
Sbjct: 206 GQGLTVADRRGTLGDELARLARRA 229
>gi|152972673|ref|YP_001337819.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238892278|ref|YP_002917012.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|262041647|ref|ZP_06014840.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|365144393|ref|ZP_09348656.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp.
4_1_44FAA]
gi|378976181|ref|YP_005224322.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386037303|ref|YP_005957216.1| GTP-binding protein YsxC [Klebsiella pneumoniae KCTC 2242]
gi|402783201|ref|YP_006638747.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419975302|ref|ZP_14490714.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981064|ref|ZP_14496343.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986391|ref|ZP_14501524.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419991990|ref|ZP_14506950.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998391|ref|ZP_14513179.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004280|ref|ZP_14518919.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010025|ref|ZP_14524503.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016078|ref|ZP_14530373.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021546|ref|ZP_14535725.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027069|ref|ZP_14541066.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032989|ref|ZP_14546799.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038463|ref|ZP_14552109.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044575|ref|ZP_14558054.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050422|ref|ZP_14563721.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420055810|ref|ZP_14568973.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420060643|ref|ZP_14573640.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067351|ref|ZP_14580144.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073940|ref|ZP_14586559.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420078533|ref|ZP_14590989.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084172|ref|ZP_14596438.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421912335|ref|ZP_16342059.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421917950|ref|ZP_16347490.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424833132|ref|ZP_18257860.1| putative GTP-binding protein EngB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424931030|ref|ZP_18349402.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425079110|ref|ZP_18482212.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425083934|ref|ZP_18487031.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|425084757|ref|ZP_18487850.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425094968|ref|ZP_18498048.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428152545|ref|ZP_19000204.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428932827|ref|ZP_19006396.1| GTP-binding protein YsxC [Klebsiella pneumoniae JHCK1]
gi|428940114|ref|ZP_19013207.1| GTP-binding protein YsxC [Klebsiella pneumoniae VA360]
gi|449059710|ref|ZP_21737396.1| GTP-binding protein YsxC [Klebsiella pneumoniae hvKP1]
gi|166225962|sp|A6TG68.1|ENGB_KLEP7 RecName: Full=Probable GTP-binding protein EngB
gi|150957522|gb|ABR79552.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238544594|dbj|BAH60945.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041000|gb|EEW42078.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|339764431|gb|AEK00652.1| GTP-binding protein YsxC [Klebsiella pneumoniae KCTC 2242]
gi|363648184|gb|EHL87367.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp.
4_1_44FAA]
gi|364515592|gb|AEW58720.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397343545|gb|EJJ36690.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397344024|gb|EJJ37162.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397348375|gb|EJJ41476.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397360566|gb|EJJ53242.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397361963|gb|EJJ54618.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397366459|gb|EJJ59076.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397375401|gb|EJJ67692.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397379945|gb|EJJ72135.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386731|gb|EJJ78800.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397394186|gb|EJJ85922.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397396263|gb|EJJ87957.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404167|gb|EJJ95687.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397411096|gb|EJK02360.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397411689|gb|EJK02939.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397421230|gb|EJK12255.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397428164|gb|EJK18910.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397432888|gb|EJK23543.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397437147|gb|EJK27718.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444659|gb|EJK34926.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450497|gb|EJK40601.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|402544036|gb|AFQ68185.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|405589109|gb|EKB62697.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405597854|gb|EKB71102.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|405608760|gb|EKB81699.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405609172|gb|EKB82052.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407805217|gb|EKF76468.1| GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410113703|emb|CCM84684.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410119652|emb|CCM90115.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|414710581|emb|CCN32285.1| putative GTP-binding protein EngB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426302814|gb|EKV65003.1| GTP-binding protein YsxC [Klebsiella pneumoniae VA360]
gi|426306737|gb|EKV68834.1| GTP-binding protein YsxC [Klebsiella pneumoniae JHCK1]
gi|427537410|emb|CCM96342.1| GTP-binding protein EngB [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448874595|gb|EMB09636.1| GTP-binding protein YsxC [Klebsiella pneumoniae hvKP1]
Length = 210
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS +G+
Sbjct: 130 IEWAVESDIQVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKSGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|229918355|ref|YP_002887001.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium sp.
AT1b]
gi|259645896|sp|C4L4J3.1|ENGB_EXISA RecName: Full=Probable GTP-binding protein EngB
gi|229469784|gb|ACQ71556.1| small GTP-binding protein [Exiguobacterium sp. AT1b]
Length = 197
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 90/145 (62%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+NK EF +A +P +LPE+A AGRSNVGKSS +N + ++ + RTS KPG TQT+
Sbjct: 3 INKAEFVTSAVAPDHYPVHELPEVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + ++ VD+PGYG+A + ++ W ++++Y++++ +L+ V LL+D +
Sbjct: 63 NFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTGD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D + + ++ + VV TK D +
Sbjct: 123 DVTMYNFLKHYEIPVIVVATKLDKI 147
>gi|291536691|emb|CBL09803.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia
intestinalis M50/1]
gi|291537975|emb|CBL11086.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia
intestinalis XB6B4]
Length = 199
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
V+S P E+AFAG+SNVGKSS++NAL + + RTS +PG TQTINF+ + + L
Sbjct: 14 VTSKVPDTAYAEVAFAGKSNVGKSSLINALMNRKALARTSAQPGKTQTINFYNINDAMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A A EEVK W ++++ Y+ T LK V LLID + D + M
Sbjct: 74 VDLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMMYEWMVYQ 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP 170
++ TK D + + + I E L VQP
Sbjct: 134 GFAPIIIATKLDKIKRSQIQKNVKAIREGLN-----VQP 167
>gi|325295391|ref|YP_004281905.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065839|gb|ADY73846.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 194
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K++ + P E+AF GRSNVGKSS+LN L + + + S +PG T+++
Sbjct: 3 IKKVKLYKTVYAPEELPQTPYKEVAFVGRSNVGKSSLLNTLVNNYKIAKVSSEPGKTRSV 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + K +VDLPGYGFA + + W +L+++Y+ R +LK V LL+D+K G +
Sbjct: 63 NFYLINDKFFMVDLPGYGFAKVPFKEQKRWRDLIEKYLKERDTLKGVFLLVDSKVGPTEK 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D ++ ++ Y VV TK D + + + ++EE LK N + P SSK+
Sbjct: 123 DKQMKDWLDFFGIPYVVVATKVDKLKSSEKQKLKRKVEEGLKDKNLEIIP---FSSKTRE 179
Query: 181 G 181
G
Sbjct: 180 G 180
>gi|240146202|ref|ZP_04744803.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia
intestinalis L1-82]
gi|257201678|gb|EEU99962.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia
intestinalis L1-82]
Length = 208
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
V+S P E+AFAG+SNVGKSS++NAL + + RTS +PG TQTINF+ + + L
Sbjct: 14 VTSKVPDTAYAEVAFAGKSNVGKSSLINALMNRKVLARTSAQPGKTQTINFYNINDAMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A A EEVK W ++++ Y+ T LK V LLID + D + M
Sbjct: 74 VDLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMMYEWMVYQ 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV 174
++ TK D + + + I E L VQP M+
Sbjct: 134 GFAPIIIATKLDKIKRSQIQKNVKAIREGLN-----VQPGTMI 171
>gi|374296851|ref|YP_005047042.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium
clariflavum DSM 19732]
gi|359826345|gb|AEV69118.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium
clariflavum DSM 19732]
Length = 193
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N F A +P D+PEI F GRSNVGKSS++NAL + + + + KPG T+ I
Sbjct: 3 INNARFEKGAVKPEQYPDNDIPEITFVGRSNVGKSSLINALLNRKNLAKVASKPGRTREI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + + VDLPGYG+A +EVK AW E ++ Y++T LK + +++D +
Sbjct: 63 NFYNVDDTVYFVDLPGYGYAKVSKEVKYAWSESIETYLNTSKKLKMIVMVVDIRHTPTDD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + S Y VV TK D + + R + I +LK +++ P++ S+++
Sbjct: 123 DKMMNKWLVNSSLPYLVVATKMDKIPRSKLKERLLDISGTLKLDSN--TPLVPFSAETKE 180
Query: 181 GIRSL 185
G +L
Sbjct: 181 GRETL 185
>gi|295109359|emb|CBL23312.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus
obeum A2-162]
Length = 201
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 90/151 (59%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P LPE+AFAG+SNVGKSS++N L + + RTS +PG TQTINF+K+ +L L
Sbjct: 14 ITSKIPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKINDELDL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A K+ W ++++ Y+ T +LK V LLID + D ++ + +
Sbjct: 74 VDLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQMYEWILHN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++ TK D + V + I E L+
Sbjct: 134 GYEPIIIATKLDKLKRSQVQKNLKAIREGLQ 164
>gi|160947714|ref|ZP_02094881.1| hypothetical protein PEPMIC_01649 [Parvimonas micra ATCC 33270]
gi|158446848|gb|EDP23843.1| ribosome biogenesis GTP-binding protein YsxC [Parvimonas micra ATCC
33270]
Length = 196
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E A + S +P DL E+AFAGRSNVGKSS +NA + + RTS KPG T+T+NF+K
Sbjct: 7 ELEQIAAIISQYPDSDLKEVAFAGRSNVGKSSFINAFINRKNLARTSSKPGKTRTVNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A + K+ W +++ Y+S R +L V L++D + D +
Sbjct: 67 INNSFRLVDLPGYGYAQVSKSEKEKWGVIIETYLSNRENLCEVILIVDIRHAPSKEDVMM 126
Query: 125 IS-LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN-SLVQPVMMVSSKSGAGI 182
+ L+E + Y V+ TK D + + + E+L N+ +LV P SS S A +
Sbjct: 127 YNWLLEYGFSGY-VIATKADKISKGQWNKHLKVVRETLGINDMNLVIP---FSSDSKANL 182
Query: 183 RSLRTVLSKI 192
++ + +I
Sbjct: 183 EAVHNKIEEI 192
>gi|261210181|ref|ZP_05924478.1| GTP-binding protein EngB [Vibrio sp. RC341]
gi|260840721|gb|EEX67270.1| GTP-binding protein EngB [Vibrio sp. RC341]
Length = 220
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VAEGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|322421712|ref|YP_004200935.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18]
gi|320128099|gb|ADW15659.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18]
Length = 211
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 93/157 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F +A + +P +LPEIAFAGRSNVGKSS++N L + +VRTS PG TQ INFF+
Sbjct: 7 QFIKSATRPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKSLVRTSSTPGRTQLINFFQ 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A VK W +++ Y++ R +L+ V L++D + D ++
Sbjct: 67 VNDDFMLVDLPGYGYAKVPLAVKKDWRPMMETYLAKRANLRGVVLILDIRRVPNEDDLQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++ + +V+TK D + + AR+ I +L
Sbjct: 127 LAWLRAYSVPPIIVVTKCDKLSKNERARQTAVITATL 163
>gi|406669484|ref|ZP_11076754.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia ignava CCUG
37419]
gi|405583180|gb|EKB57148.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia ignava CCUG
37419]
Length = 194
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 87/144 (60%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+ +E +A + +PAP+LPEIA AGRSNVGKSS +NA+ + GV RTS +PG TQT+N
Sbjct: 4 HTIEMLTSAVSPAQYPAPNLPEIALAGRSNVGKSSFINAMVGRQGVARTSSQPGKTQTLN 63
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+++ + VDLPGYG+A + ++ + + + +Y+ R +L + LL+D + D
Sbjct: 64 FYEIDHQFRFVDLPGYGYARVSKRERERFNQFISDYLHQRENLVALLLLMDFRHPPTVLD 123
Query: 122 HELISLMERSQTKYQVVLTKTDTV 145
+ + + Y +V TK D +
Sbjct: 124 LGMKEFADELEIPYAIVTTKIDKI 147
>gi|134300397|ref|YP_001113893.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
reducens MI-1]
gi|172044336|sp|A4J7L5.1|ENGB_DESRM RecName: Full=Probable GTP-binding protein EngB
gi|134053097|gb|ABO51068.1| small GTP-binding protein [Desulfotomaculum reducens MI-1]
Length = 205
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P +LPE+AF GRSNVGKSS++N + + G+ +TS PG TQ INFF
Sbjct: 7 EFVTSAVNPGGYPPGNLPEVAFVGRSNVGKSSLINKVVNRKGLAKTSSTPGRTQLINFFN 66
Query: 65 LGT-KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ + +VDLPGYG+A +V+ W ++++ Y+ R LK V LLID++ +D +
Sbjct: 67 INNDQFLMVDLPGYGYAKVPTDVRIKWGKMIEGYLKERECLKGVVLLIDSRHTPTAQDKQ 126
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR 183
+ ++ VV TK D + A++ I++SL + ++ S+++G G
Sbjct: 127 MYEWLQYYHVPTVVVATKVDKLSNNQWAKQQAVIKKSLPLSKE--HQLISFSAETGRGKE 184
Query: 184 SLRTVLSK 191
L VL +
Sbjct: 185 KLLKVLDE 192
>gi|153813471|ref|ZP_01966139.1| hypothetical protein RUMOBE_03891 [Ruminococcus obeum ATCC 29174]
gi|149830415|gb|EDM85507.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus obeum
ATCC 29174]
Length = 201
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 90/151 (59%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P LPE+AFAG+SNVGKSS++N L + + RTS +PG TQTINF+K+ +L L
Sbjct: 14 ITSKIPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKINDELDL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A K+ W ++++ Y+ T +LK V LLID + D ++ + +
Sbjct: 74 VDLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQMYEWILHN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++ TK D + V + I E L+
Sbjct: 134 GYEPIIIATKLDKLKRSQVQKNLKAIREGLQ 164
>gi|149192614|ref|ZP_01870766.1| GTPase EngB [Vibrio shilonii AK1]
gi|148833550|gb|EDL50635.1| GTPase EngB [Vibrio shilonii AK1]
Length = 244
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 40 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQRALAKTSKTPGRTQLINLFK 99
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D +L
Sbjct: 100 VDEGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRKCLKGLVVLMDIRHPMKDLDQQL 159
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + ++I E+ A VQ V SS G G+
Sbjct: 160 IQWAVESHIPVQVLLTKADKLKSGARKAQVLKIREAALAFGGDVQ-VDAFSSLKGIGVDQ 218
Query: 185 LRTVLS 190
L + L
Sbjct: 219 LPSKLD 224
>gi|270292404|ref|ZP_06198615.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M143]
gi|270278383|gb|EFA24229.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M143]
Length = 197
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 11 EILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 71 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 131 YEFLKYYEIPVIIVATKADKI 151
>gi|414158850|ref|ZP_11415142.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0441]
gi|410868833|gb|EKS16797.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0441]
Length = 195
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|306824843|ref|ZP_07458187.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 071 str. 73H25AP]
gi|417793767|ref|ZP_12441038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK255]
gi|304433054|gb|EFM36026.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 071 str. 73H25AP]
gi|334272195|gb|EGL90565.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK255]
Length = 195
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|225175196|ref|ZP_03729192.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
gi|225169372|gb|EEG78170.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
Length = 197
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 2/190 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A + FP LPE+AF GRSNVGKS++LN+L + + TS PG T+ INFF
Sbjct: 7 EFIISAAGAEQFPTDMLPEVAFVGRSNVGKSTLLNSLVNRKKLALTSGNPGKTRLINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ DLPGYGFA E+K W L++ Y+ TR +L+ V L+D + D +
Sbjct: 67 INEAFYFADLPGYGFARVSHEMKKQWGLLIENYLQTRETLQVVAQLVDLRHPPTADDLAM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ +V TK D + + + Q+ E L + PV+M S+K+G G
Sbjct: 127 YQWLIHFNIPTIIVATKADKISRGNRQKHVKQVREGLGLGSQ--GPVIMFSAKTGEGKDD 184
Query: 185 LRTVLSKIAR 194
+ V+ + +
Sbjct: 185 IWKVIQQFVQ 194
>gi|227355156|ref|ZP_03839567.1| GTP-binding protein [Proteus mirabilis ATCC 29906]
gi|227164943|gb|EEI49790.1| GTP-binding protein [Proteus mirabilis ATCC 29906]
Length = 200
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 90/160 (56%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
K F +A P EIAFAGRSN GKSS LNALT+Q G+ RTS PG TQ IN
Sbjct: 21 QKAHFIISAPDIRHLPPDTGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGRTQLIN 80
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ LVDLPGYG+A EE+K W+ + EY+ R LK V +L+D + +K D
Sbjct: 81 LFQIEEGRRLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKRECLKGVVILMDIRHPLKDLD 140
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++I S+ V+LTK D + ++ M ++ +L
Sbjct: 141 MQMIDWAVDSELPTLVLLTKADKLASGARKKQLMAVQNAL 180
>gi|84386307|ref|ZP_00989335.1| Predicted GTPase [Vibrio splendidus 12B01]
gi|84378731|gb|EAP95586.1| Predicted GTPase [Vibrio splendidus 12B01]
Length = 219
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN +T Q G+ +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKGLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D ++
Sbjct: 71 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRA--MQIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ QV+LTK D + AR+A ++I K+ V V + SS G G+
Sbjct: 131 IYWAIDSRIPVQVLLTKADKLKS--GARKAQLLKIRNDAKSFGGDV-AVDVFSSMKGIGV 187
Query: 183 RSLRTVLSK 191
LR + +
Sbjct: 188 DQLRAKMDE 196
>gi|336430075|ref|ZP_08610031.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336001246|gb|EGN31391.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 214
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P LPEIAFAG+SNVGKSS++NA+ + + RTS +PG TQTIN++ + L
Sbjct: 14 ITSKLPDNLLPEIAFAGKSNVGKSSLINAVMNRKSLARTSSQPGKTQTINYYNVNDAFYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A A E +K W ++V+ Y+ + LK V LLID + D ++ +
Sbjct: 74 VDLPGYGYAKANEAIKAQWGKMVERYLRSSKQLKTVFLLIDIRHEPSANDRQMYQWICHQ 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
++ TK D + V + + E L+A+ V +K G
Sbjct: 134 GYHPVIIATKMDKLNRSQVPKALKTVREGLEADKGTVIIPFSAQTKQG 181
>gi|429887033|ref|ZP_19368563.1| GTP-binding protein EngB [Vibrio cholerae PS15]
gi|429225980|gb|EKY32159.1| GTP-binding protein EngB [Vibrio cholerae PS15]
Length = 220
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKTQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|291280219|ref|YP_003497054.1| GTP-binding protein [Deferribacter desulfuricans SSM1]
gi|290754921|dbj|BAI81298.1| GTP-binding protein [Deferribacter desulfuricans SSM1]
Length = 191
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 82/141 (58%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K E+ +A +P DLPEIAF GRSNVGKSSM+N L + +V+ S KPG T+TINF
Sbjct: 2 KAEYIKSAVYEKDYPDTDLPEIAFVGRSNVGKSSMINTLVNRKKLVKVSQKPGKTRTINF 61
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + +L VDLPGYG+A ++ ++ W+ +++ Y++ R LK V L+ID + G D
Sbjct: 62 FNINDELIFVDLPGYGYAKVSKKDRELWKVMIETYLTKRSQLKAVVLIIDIRVGPTNDDK 121
Query: 123 ELISLMERSQTKYQVVLTKTD 143
+ V TK D
Sbjct: 122 LMYEWFMAYNVPTIVAFTKCD 142
>gi|410462243|ref|ZP_11315835.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984641|gb|EKO40938.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 208
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 108/194 (55%), Gaps = 11/194 (5%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
L + A +++ P D P+IA AGRSNVGKS+++N L + + +TS PG T+++NF+
Sbjct: 13 LTLLSTAYLANQLPTLDAPQIALAGRSNVGKSTLINCLAGRKALAKTSATPGKTRSLNFY 72
Query: 64 KLGTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
T+ CLVDLPGYG+A +E +D W +L++ Y++T +L+ V LID + + D
Sbjct: 73 MAETQGYCLVDLPGYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDM 132
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPV---MMVSSKSG 179
EL+S + + V LTK + V D R + E L QP ++ S K+G
Sbjct: 133 ELVSWLRSRRIPVLVALTKAEKVPQRDREARKKEWRE-------LAQPAFPPVVFSGKTG 185
Query: 180 AGIRSLRTVLSKIA 193
G +L V ++ A
Sbjct: 186 LGREALCRVFAEAA 199
>gi|397162777|ref|ZP_10486244.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter
radicincitans DSM 16656]
gi|396095542|gb|EJI93085.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter
radicincitans DSM 16656]
Length = 208
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K F +A PA E+AFAGRSN GKSS LN LT+Q + RTS PG TQ IN
Sbjct: 8 KTHFVTSAPDIRHLPADTGVEVAFAGRSNAGKSSALNTLTQQKNLARTSKTPGRTQLINL 67
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F++ LVDLPGYG+A EE+K W+ + EY+ R L+ + +L+D + +K D
Sbjct: 68 FEVAEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLEKRQCLQGLVVLMDIRHPLKDLDQ 127
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++IS S + V+LTK D + + + E++ A N VQ V SS G+
Sbjct: 128 QMISWAVESNLQVLVLLTKADKLASGARKTQLNMVREAVLAFNGEVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLREKLD 194
>gi|227540053|ref|ZP_03970102.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227240069|gb|EEI90084.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 207
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF + P P LPE AF GRSNVGKSS++NA+T + G+ +TS KPG TQ IN
Sbjct: 5 KAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLINH 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + + LVDLPGYGFA + + W++ ++ Y++ R +L+ V +LID++ + D
Sbjct: 65 FIINDEWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKIDL 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ + + +V TK D + + +SL V P + S+++ G
Sbjct: 125 DFCCWLGECGLPFMLVFTKADKQSAVKSDVNIAKFRKSLLQWFEEVPPHFLTSAEAKTGC 184
Query: 183 RSLRTVLSKI-ARF 195
+ +++ I RF
Sbjct: 185 EPILEMINDINTRF 198
>gi|291087566|ref|ZP_06346804.2| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
M62/1]
gi|291074656|gb|EFE12020.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
M62/1]
Length = 218
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 84/143 (58%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K++ V+S PA PE AFAG+SNVGKSS++NAL + RTS +PG TQTI
Sbjct: 16 IKKVDLETVCGVTSRLPANTQPEFAFAGKSNVGKSSLINALMNRKSYARTSAQPGKTQTI 75
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + L VDLPGYG+A A EEVK W ++++ Y+ LK V LLID +
Sbjct: 76 NFYHINDALYYVDLPGYGYARANEEVKAKWGKMIENYLHKSPMLKCVFLLIDIRHEPSEN 135
Query: 121 DHELISLMERSQTKYQVVLTKTD 143
D + S ++ + ++ TK D
Sbjct: 136 DRLMYSWIQNQGYRPVIIATKLD 158
>gi|407794114|ref|ZP_11141143.1| ribosome biogenesis GTP-binding protein YsxC [Idiomarina
xiamenensis 10-D-4]
gi|407213538|gb|EKE83394.1| ribosome biogenesis GTP-binding protein YsxC [Idiomarina
xiamenensis 10-D-4]
Length = 214
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 82/141 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F +A PA + EIAFAGRSN GKSS LN LTRQ + RTS PG TQ IN F+
Sbjct: 12 KFITSAPNIRQLPADEGIEIAFAGRSNAGKSSALNTLTRQRSLARTSKTPGRTQLINVFE 71
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L L+DLPGYGFA VK+ W++ + EY+ R SLK + +L+D + + D EL
Sbjct: 72 LTPGKRLIDLPGYGFAKVPMAVKEKWQQSLSEYLQERRSLKGLVVLMDIRHPYREADQEL 131
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
I SQ +LTK D +
Sbjct: 132 IYWAVASQIPVLALLTKADKL 152
>gi|126325745|ref|XP_001366885.1| PREDICTED: GTP-binding protein 8-like [Monodelphis domestica]
Length = 288
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 8/200 (4%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVV--RTSDKPGLTQT 59
+++++ ++A P+ PEI F GRSNVGKSS++ AL V R S KPG T+
Sbjct: 88 HRIDYLSSAVRLDHAPSSSSPEICFIGRSNVGKSSLIKALFSLVPEVEVRVSKKPGHTKK 147
Query: 60 INFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
+NFFK+G LVD+PGYGF K+ V E+V+ Y+ R +L R LL+D+ G++
Sbjct: 148 MNFFKVGKYFTLVDMPGYGFKAPKDFV-----EMVEAYLKERTNLTRTFLLVDSVVGIQK 202
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMM-VSSKS 178
D I + E Y +VLTK D +A++ +QI+E + P + VSS +
Sbjct: 203 ADRIAIEMCEEYALPYVMVLTKIDKASKGHIAKQVLQIQEFVDTQTQGCFPQLFPVSSVT 262
Query: 179 GAGIRSLRTVLSKIARFAKV 198
+GI LR ++ + K+
Sbjct: 263 YSGIHLLRCFMTYVTGNCKI 282
>gi|227500205|ref|ZP_03930274.1| GTPase [Anaerococcus tetradius ATCC 35098]
gi|227217727|gb|EEI83031.1| GTPase [Anaerococcus tetradius ATCC 35098]
Length = 195
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 92/160 (57%), Gaps = 7/160 (4%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+E A +P DLPEIA GRSNVGKSS +N+ + + +TS KPG T+TINF+
Sbjct: 6 IELEQVAGFKKQWPGEDLPEIALVGRSNVGKSSFINSFLGRKKLAKTSSKPGKTRTINFY 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
++ K LVDLPGYG+A + KD W++L+ EY+ R SL+ V L++D + D +
Sbjct: 66 RINDKFRLVDLPGYGYAKVSKAEKDKWDKLINEYLHQRESLREVFLIVDIRHEPTTLDCQ 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA 163
+ + S V+ TK D + + QI++++KA
Sbjct: 126 MYKWIRESGFTGFVIATKFDKI-------KKSQIQKNIKA 158
>gi|13124224|sp|Q9PDE9.2|ENGB_XYLFA RecName: Full=Probable GTP-binding protein EngB
Length = 203
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ +A + PA D E+AFAGRSN GKSS+LN LTRQ + R S PG TQ + +F
Sbjct: 9 KYLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFT 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A +E++ W+ + Y R +L+ + +++D + +K D ++
Sbjct: 69 VTPQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ + Q +LTK D + A+ ++ L + + + SSKS G+
Sbjct: 129 LAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQ 188
Query: 185 LRTVLSK---IARFA 196
L TV+ +AR A
Sbjct: 189 LHTVIETWLGLARLA 203
>gi|306829877|ref|ZP_07463064.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
ATCC 6249]
gi|401684726|ref|ZP_10816601.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
BS35b]
gi|419780500|ref|ZP_14306348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK100]
gi|304427888|gb|EFM30981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
ATCC 6249]
gi|383185234|gb|EIC77732.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK100]
gi|400184542|gb|EJO18781.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
BS35b]
Length = 195
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|147674030|ref|YP_001218307.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O395]
gi|227116437|ref|YP_002818333.1| putative GTP-binding protein engB [Vibrio cholerae O395]
gi|262167044|ref|ZP_06034761.1| GTP-binding protein EngB [Vibrio cholerae RC27]
gi|172047517|sp|A5F4I0.1|ENGB_VIBC3 RecName: Full=Probable GTP-binding protein EngB
gi|146315913|gb|ABQ20452.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227011887|gb|ACP08097.1| putative GTP-binding protein engB [Vibrio cholerae O395]
gi|262024562|gb|EEY43246.1| GTP-binding protein EngB [Vibrio cholerae RC27]
Length = 220
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNTGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|402496739|ref|YP_006555999.1| GTPase EngB [Wolbachia endosymbiont of Onchocerca ochengi]
gi|398650012|emb|CCF78182.1| GTPase EngB [Wolbachia endosymbiont of Onchocerca ochengi]
Length = 193
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL- 65
F A+ + S P +PEIAFAGRSNVGKSS++N L R S KPG T+ +NF+ +
Sbjct: 9 FGASDIKS-LPGESVPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQVNFYSMY 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K LVDLPGYG++ A +E + L + Y++ R SLKRV +L+D+K G+K D + I
Sbjct: 68 NDKFRLVDLPGYGYSCASKEETIQYLNLSEYYLAQRRSLKRVFVLVDSKVGLKEIDKDFI 127
Query: 126 SLMERSQTKYQVVLTKTDTV 145
+ + + +VLTK D V
Sbjct: 128 YWLIYNNINFDIVLTKVDKV 147
>gi|229515855|ref|ZP_04405313.1| GTP-binding protein EngB [Vibrio cholerae TMA 21]
gi|229347118|gb|EEO12079.1| GTP-binding protein EngB [Vibrio cholerae TMA 21]
Length = 220
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|254373002|ref|ZP_04988491.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374451|ref|ZP_04989933.1| hypothetical protein FTDG_00620 [Francisella novicida GA99-3548]
gi|151570729|gb|EDN36383.1| ATP/GTP-binding protein [Francisella novicida GA99-3549]
gi|151572171|gb|EDN37825.1| hypothetical protein FTDG_00620 [Francisella novicida GA99-3548]
Length = 197
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 8 AAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT 67
AAKVS P E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 11 GAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGD 69
Query: 68 KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISL 127
LVDLPGYG+A E +K W+ ++ Y+++R L + LL+D++ +K D +I +
Sbjct: 70 NNRLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDSRHELKEFDSLMIEM 129
Query: 128 MERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++LTK D + + A+ IE LK
Sbjct: 130 AISFDLNLHILLTKADKLNNKERAQANRMIESFLK 164
>gi|423211849|ref|ZP_17198382.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER397]
gi|404612650|gb|EKB09708.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER397]
Length = 218
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK+ F +A P EIAFAGRSN GKSS LN LT+ + RTS PG TQ IN
Sbjct: 9 NKVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+L LVDLPGYG+A E+K W++ + EY+ R SLK + +L+D + +K D
Sbjct: 69 LFELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ Q ++LTK D + P + +++ +++ S +Q V SS + G
Sbjct: 129 MNMLEWSSHRQLPVMLLLTKADKLSPGPRNNQVIKVRQAVANLGSQIQ-VEAFSSLTNIG 187
Query: 182 IRSLRTVLSK 191
+ L L++
Sbjct: 188 VEKLAQTLTE 197
>gi|336247957|ref|YP_004591667.1| GTP-binding protein YsxC [Enterobacter aerogenes KCTC 2190]
gi|334734013|gb|AEG96388.1| GTP-binding protein YsxC [Enterobacter aerogenes KCTC 2190]
Length = 210
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W++ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQKALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E+++A N +Q V SS G+
Sbjct: 130 IEWAVESDIQVLVLLTKADKL--ASGARKAQVNMVREAVQAFNGDIQ-VEPFSSLKKTGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|315613539|ref|ZP_07888446.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 49296]
gi|315314230|gb|EFU62275.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 49296]
Length = 195
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|417915483|ref|ZP_12559092.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. SK95]
gi|342833322|gb|EGU67603.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. SK95]
Length = 195
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|153803406|ref|ZP_01957992.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124121063|gb|EAY39806.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 220
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|15640143|ref|NP_229770.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121587744|ref|ZP_01677505.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121728280|ref|ZP_01681311.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153214830|ref|ZP_01949638.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153822336|ref|ZP_01975003.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153826298|ref|ZP_01978965.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|227080347|ref|YP_002808898.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
M66-2]
gi|229508389|ref|ZP_04397893.1| GTP-binding protein EngB [Vibrio cholerae BX 330286]
gi|229508930|ref|ZP_04398420.1| GTP-binding protein EngB [Vibrio cholerae B33]
gi|229517044|ref|ZP_04406490.1| GTP-binding protein EngB [Vibrio cholerae RC9]
gi|229520097|ref|ZP_04409525.1| GTP-binding protein EngB [Vibrio cholerae TM 11079-80]
gi|229606662|ref|YP_002877310.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
MJ-1236]
gi|254226590|ref|ZP_04920171.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254291920|ref|ZP_04962701.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254851495|ref|ZP_05240845.1| GTPase EngB [Vibrio cholerae MO10]
gi|255743935|ref|ZP_05417890.1| GTP-binding protein EngB [Vibrio cholera CIRS 101]
gi|262151174|ref|ZP_06028313.1| GTP-binding protein EngB [Vibrio cholerae INDRE 91/1]
gi|298501120|ref|ZP_07010920.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MAK
757]
gi|360036667|ref|YP_004938430.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O1
str. 2010EL-1786]
gi|379740007|ref|YP_005331976.1| GTP-binding protein YsxC [Vibrio cholerae IEC224]
gi|417811191|ref|ZP_12457858.1| putative GTP-binding protein EngB [Vibrio cholerae HC-49A2]
gi|417814945|ref|ZP_12461587.1| putative GTP-binding protein EngB [Vibrio cholerae HCUF01]
gi|418330821|ref|ZP_12941783.1| putative GTP-binding protein EngB [Vibrio cholerae HC-06A1]
gi|418335787|ref|ZP_12944691.1| putative GTP-binding protein EngB [Vibrio cholerae HC-23A1]
gi|418342355|ref|ZP_12949171.1| putative GTP-binding protein EngB [Vibrio cholerae HC-28A1]
gi|418347530|ref|ZP_12952271.1| putative GTP-binding protein EngB [Vibrio cholerae HC-43A1]
gi|418353039|ref|ZP_12955767.1| putative GTP-binding protein EngB [Vibrio cholerae HC-61A1]
gi|419824580|ref|ZP_14348092.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
CP1033(6)]
gi|419835048|ref|ZP_14358497.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-46B1]
gi|421315331|ref|ZP_15765906.1| putative GTP-binding protein EngB [Vibrio cholerae CP1032(5)]
gi|421318908|ref|ZP_15769471.1| putative GTP-binding protein EngB [Vibrio cholerae CP1038(11)]
gi|421322962|ref|ZP_15773496.1| putative GTP-binding protein EngB [Vibrio cholerae CP1041(14)]
gi|421326413|ref|ZP_15776933.1| putative GTP-binding protein EngB [Vibrio cholerae CP1042(15)]
gi|421330339|ref|ZP_15780826.1| putative GTP-binding protein EngB [Vibrio cholerae CP1046(19)]
gi|421337490|ref|ZP_15787949.1| putative GTP-binding protein EngB [Vibrio cholerae CP1048(21)]
gi|421337846|ref|ZP_15788289.1| putative GTP-binding protein EngB [Vibrio cholerae HC-20A2]
gi|421341705|ref|ZP_15792115.1| putative GTP-binding protein EngB [Vibrio cholerae HC-43B1]
gi|421348781|ref|ZP_15799156.1| putative GTP-binding protein EngB [Vibrio cholerae HC-46A1]
gi|421352877|ref|ZP_15803216.1| putative GTP-binding protein EngB [Vibrio cholerae HE-45]
gi|422890141|ref|ZP_16932589.1| putative GTP-binding protein EngB [Vibrio cholerae HC-40A1]
gi|422900926|ref|ZP_16936339.1| putative GTP-binding protein EngB [Vibrio cholerae HC-48A1]
gi|422905110|ref|ZP_16939987.1| putative GTP-binding protein EngB [Vibrio cholerae HC-70A1]
gi|422908653|ref|ZP_16943332.1| putative GTP-binding protein EngB [Vibrio cholerae HE-09]
gi|422911858|ref|ZP_16946398.1| putative GTP-binding protein EngB [Vibrio cholerae HFU-02]
gi|422921363|ref|ZP_16954602.1| putative GTP-binding protein EngB [Vibrio cholerae BJG-01]
gi|422924323|ref|ZP_16957384.1| putative GTP-binding protein EngB [Vibrio cholerae HC-38A1]
gi|423143385|ref|ZP_17131014.1| putative GTP-binding protein EngB [Vibrio cholerae HC-19A1]
gi|423148367|ref|ZP_17135739.1| putative GTP-binding protein EngB [Vibrio cholerae HC-21A1]
gi|423152153|ref|ZP_17139378.1| putative GTP-binding protein EngB [Vibrio cholerae HC-22A1]
gi|423154947|ref|ZP_17142093.1| putative GTP-binding protein EngB [Vibrio cholerae HC-32A1]
gi|423158811|ref|ZP_17145792.1| putative GTP-binding protein EngB [Vibrio cholerae HC-33A2]
gi|423163472|ref|ZP_17150283.1| putative GTP-binding protein EngB [Vibrio cholerae HC-48B2]
gi|423729484|ref|ZP_17702822.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-17A1]
gi|423733394|ref|ZP_17706628.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-41B1]
gi|423745264|ref|ZP_17711000.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-50A2]
gi|423889539|ref|ZP_17725039.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-62A1]
gi|423922952|ref|ZP_17729651.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-77A1]
gi|424000658|ref|ZP_17743762.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-17A2]
gi|424004820|ref|ZP_17747819.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-37A1]
gi|424007691|ref|ZP_17750650.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-44C1]
gi|424022617|ref|ZP_17762294.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-62B1]
gi|424025636|ref|ZP_17765267.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-69A1]
gi|424585008|ref|ZP_18024616.1| putative GTP-binding protein EngB [Vibrio cholerae CP1030(3)]
gi|424589381|ref|ZP_18028840.1| putative GTP-binding protein EngB [Vibrio cholerae CP1037(10)]
gi|424593635|ref|ZP_18032990.1| putative GTP-binding protein EngB [Vibrio cholerae CP1040(13)]
gi|424597565|ref|ZP_18036778.1| putative GTP-binding protein EngB [Vibrio Cholerae CP1044(17)]
gi|424600339|ref|ZP_18039509.1| putative GTP-binding protein EngB [Vibrio cholerae CP1047(20)]
gi|424605241|ref|ZP_18044221.1| putative GTP-binding protein EngB [Vibrio cholerae CP1050(23)]
gi|424608964|ref|ZP_18047837.1| putative GTP-binding protein EngB [Vibrio cholerae HC-39A1]
gi|424611876|ref|ZP_18050698.1| putative GTP-binding protein EngB [Vibrio cholerae HC-41A1]
gi|424615762|ref|ZP_18054468.1| putative GTP-binding protein EngB [Vibrio cholerae HC-42A1]
gi|424620515|ref|ZP_18059055.1| putative GTP-binding protein EngB [Vibrio cholerae HC-47A1]
gi|424643332|ref|ZP_18081102.1| putative GTP-binding protein EngB [Vibrio cholerae HC-56A2]
gi|424651262|ref|ZP_18088799.1| putative GTP-binding protein EngB [Vibrio cholerae HC-57A2]
gi|424655215|ref|ZP_18092528.1| putative GTP-binding protein EngB [Vibrio cholerae HC-81A2]
gi|424658016|ref|ZP_18095285.1| putative GTP-binding protein EngB [Vibrio cholerae HE-16]
gi|440711970|ref|ZP_20892597.1| GTP-binding protein EngB [Vibrio cholerae 4260B]
gi|443502167|ref|ZP_21069171.1| putative GTP-binding protein EngB [Vibrio cholerae HC-64A1]
gi|443506066|ref|ZP_21072877.1| putative GTP-binding protein EngB [Vibrio cholerae HC-65A1]
gi|443509902|ref|ZP_21076588.1| putative GTP-binding protein EngB [Vibrio cholerae HC-67A1]
gi|443513745|ref|ZP_21080302.1| putative GTP-binding protein EngB [Vibrio cholerae HC-68A1]
gi|443517549|ref|ZP_21083988.1| putative GTP-binding protein EngB [Vibrio cholerae HC-71A1]
gi|443522138|ref|ZP_21088400.1| putative GTP-binding protein EngB [Vibrio cholerae HC-72A2]
gi|443529071|ref|ZP_21095093.1| putative GTP-binding protein EngB [Vibrio cholerae HC-7A1]
gi|443533808|ref|ZP_21099744.1| putative GTP-binding protein EngB [Vibrio cholerae HC-80A1]
gi|443536630|ref|ZP_21102490.1| putative GTP-binding protein EngB [Vibrio cholerae HC-81A1]
gi|449054780|ref|ZP_21733448.1| GTP-binding protein EngB [Vibrio cholerae O1 str. Inaba G4222]
gi|12644600|sp|Q9KVN0.1|ENGB_VIBCH RecName: Full=Probable GTP-binding protein EngB
gi|254783219|sp|C3LPV3.1|ENGB_VIBCM RecName: Full=Probable GTP-binding protein EngB
gi|9654510|gb|AAF93289.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548043|gb|EAX58121.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121629410|gb|EAX61839.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124115073|gb|EAY33893.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|125620862|gb|EAZ49215.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126520162|gb|EAZ77385.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|149739966|gb|EDM54145.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150422130|gb|EDN14096.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227008235|gb|ACP04447.1| putative GTP-binding protein engB [Vibrio cholerae M66-2]
gi|229342885|gb|EEO07875.1| GTP-binding protein EngB [Vibrio cholerae TM 11079-80]
gi|229346107|gb|EEO11079.1| GTP-binding protein EngB [Vibrio cholerae RC9]
gi|229354047|gb|EEO18980.1| GTP-binding protein EngB [Vibrio cholerae B33]
gi|229354662|gb|EEO19584.1| GTP-binding protein EngB [Vibrio cholerae BX 330286]
gi|229369317|gb|ACQ59740.1| GTP-binding protein EngB [Vibrio cholerae MJ-1236]
gi|254847200|gb|EET25614.1| GTPase EngB [Vibrio cholerae MO10]
gi|255738418|gb|EET93808.1| GTP-binding protein EngB [Vibrio cholera CIRS 101]
gi|262031068|gb|EEY49693.1| GTP-binding protein EngB [Vibrio cholerae INDRE 91/1]
gi|297540154|gb|EFH76215.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MAK
757]
gi|340045790|gb|EGR06729.1| putative GTP-binding protein EngB [Vibrio cholerae HCUF01]
gi|340046116|gb|EGR07050.1| putative GTP-binding protein EngB [Vibrio cholerae HC-49A2]
gi|341626834|gb|EGS52190.1| putative GTP-binding protein EngB [Vibrio cholerae HC-70A1]
gi|341628369|gb|EGS53627.1| putative GTP-binding protein EngB [Vibrio cholerae HC-48A1]
gi|341628627|gb|EGS53850.1| putative GTP-binding protein EngB [Vibrio cholerae HC-40A1]
gi|341639316|gb|EGS63936.1| putative GTP-binding protein EngB [Vibrio cholerae HE-09]
gi|341641978|gb|EGS66489.1| putative GTP-binding protein EngB [Vibrio cholerae HFU-02]
gi|341649169|gb|EGS73164.1| putative GTP-binding protein EngB [Vibrio cholerae BJG-01]
gi|341649246|gb|EGS73240.1| putative GTP-binding protein EngB [Vibrio cholerae HC-38A1]
gi|356422920|gb|EHH76383.1| putative GTP-binding protein EngB [Vibrio cholerae HC-06A1]
gi|356423646|gb|EHH77087.1| putative GTP-binding protein EngB [Vibrio cholerae HC-21A1]
gi|356427794|gb|EHH81034.1| putative GTP-binding protein EngB [Vibrio cholerae HC-19A1]
gi|356434607|gb|EHH87784.1| putative GTP-binding protein EngB [Vibrio cholerae HC-23A1]
gi|356435981|gb|EHH89116.1| putative GTP-binding protein EngB [Vibrio cholerae HC-22A1]
gi|356438867|gb|EHH91869.1| putative GTP-binding protein EngB [Vibrio cholerae HC-28A1]
gi|356445562|gb|EHH98365.1| putative GTP-binding protein EngB [Vibrio cholerae HC-32A1]
gi|356448615|gb|EHI01378.1| putative GTP-binding protein EngB [Vibrio cholerae HC-43A1]
gi|356451271|gb|EHI03966.1| putative GTP-binding protein EngB [Vibrio cholerae HC-33A2]
gi|356455552|gb|EHI08193.1| putative GTP-binding protein EngB [Vibrio cholerae HC-61A1]
gi|356456845|gb|EHI09426.1| putative GTP-binding protein EngB [Vibrio cholerae HC-48B2]
gi|356647821|gb|AET27876.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O1
str. 2010EL-1786]
gi|378793517|gb|AFC56988.1| GTP-binding protein YsxC [Vibrio cholerae IEC224]
gi|395924076|gb|EJH34885.1| putative GTP-binding protein EngB [Vibrio cholerae CP1032(5)]
gi|395925311|gb|EJH36111.1| putative GTP-binding protein EngB [Vibrio cholerae CP1041(14)]
gi|395926450|gb|EJH37233.1| putative GTP-binding protein EngB [Vibrio cholerae CP1038(11)]
gi|395929113|gb|EJH39864.1| putative GTP-binding protein EngB [Vibrio cholerae CP1048(21)]
gi|395935947|gb|EJH46681.1| putative GTP-binding protein EngB [Vibrio cholerae CP1042(15)]
gi|395936337|gb|EJH47062.1| putative GTP-binding protein EngB [Vibrio cholerae CP1046(19)]
gi|395939192|gb|EJH49875.1| putative GTP-binding protein EngB [Vibrio cholerae HC-46A1]
gi|395947289|gb|EJH57945.1| putative GTP-binding protein EngB [Vibrio cholerae HC-43B1]
gi|395948111|gb|EJH58765.1| putative GTP-binding protein EngB [Vibrio cholerae HC-20A2]
gi|395956673|gb|EJH67266.1| putative GTP-binding protein EngB [Vibrio cholerae HE-45]
gi|395964994|gb|EJH75181.1| putative GTP-binding protein EngB [Vibrio cholerae HC-56A2]
gi|395965193|gb|EJH75372.1| putative GTP-binding protein EngB [Vibrio cholerae HC-57A2]
gi|395967824|gb|EJH77864.1| putative GTP-binding protein EngB [Vibrio cholerae HC-42A1]
gi|395977011|gb|EJH86441.1| putative GTP-binding protein EngB [Vibrio cholerae HC-47A1]
gi|395979655|gb|EJH88993.1| putative GTP-binding protein EngB [Vibrio cholerae CP1030(3)]
gi|395980119|gb|EJH89419.1| putative GTP-binding protein EngB [Vibrio cholerae CP1047(20)]
gi|408011334|gb|EKG49155.1| putative GTP-binding protein EngB [Vibrio cholerae HC-39A1]
gi|408018278|gb|EKG55733.1| putative GTP-binding protein EngB [Vibrio cholerae HC-41A1]
gi|408037806|gb|EKG74180.1| putative GTP-binding protein EngB [Vibrio cholerae CP1037(10)]
gi|408038705|gb|EKG75033.1| putative GTP-binding protein EngB [Vibrio cholerae CP1040(13)]
gi|408045828|gb|EKG81596.1| putative GTP-binding protein EngB [Vibrio Cholerae CP1044(17)]
gi|408047698|gb|EKG83264.1| putative GTP-binding protein EngB [Vibrio cholerae CP1050(23)]
gi|408057006|gb|EKG91875.1| putative GTP-binding protein EngB [Vibrio cholerae HE-16]
gi|408058248|gb|EKG93062.1| putative GTP-binding protein EngB [Vibrio cholerae HC-81A2]
gi|408612555|gb|EKK85890.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
CP1033(6)]
gi|408628550|gb|EKL01286.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-17A1]
gi|408632499|gb|EKL04950.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-41B1]
gi|408645048|gb|EKL16715.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-50A2]
gi|408660376|gb|EKL31394.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-77A1]
gi|408661198|gb|EKL32190.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-62A1]
gi|408850169|gb|EKL90145.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-37A1]
gi|408850501|gb|EKL90456.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-17A2]
gi|408859490|gb|EKL99148.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-46B1]
gi|408868118|gb|EKM07463.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-44C1]
gi|408876379|gb|EKM15507.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-62B1]
gi|408882370|gb|EKM21203.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-69A1]
gi|439972393|gb|ELP48679.1| GTP-binding protein EngB [Vibrio cholerae 4260B]
gi|443433470|gb|ELS75976.1| putative GTP-binding protein EngB [Vibrio cholerae HC-64A1]
gi|443437308|gb|ELS83404.1| putative GTP-binding protein EngB [Vibrio cholerae HC-65A1]
gi|443441141|gb|ELS90808.1| putative GTP-binding protein EngB [Vibrio cholerae HC-67A1]
gi|443444954|gb|ELS98210.1| putative GTP-binding protein EngB [Vibrio cholerae HC-68A1]
gi|443448815|gb|ELT05428.1| putative GTP-binding protein EngB [Vibrio cholerae HC-71A1]
gi|443451852|gb|ELT12094.1| putative GTP-binding protein EngB [Vibrio cholerae HC-72A2]
gi|443460157|gb|ELT27546.1| putative GTP-binding protein EngB [Vibrio cholerae HC-7A1]
gi|443463030|gb|ELT34045.1| putative GTP-binding protein EngB [Vibrio cholerae HC-80A1]
gi|443467877|gb|ELT42531.1| putative GTP-binding protein EngB [Vibrio cholerae HC-81A1]
gi|448265926|gb|EMB03159.1| GTP-binding protein EngB [Vibrio cholerae O1 str. Inaba G4222]
Length = 220
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|417822275|ref|ZP_12468876.1| putative GTP-binding protein EngB [Vibrio cholerae HE48]
gi|421348987|ref|ZP_15799357.1| putative GTP-binding protein EngB [Vibrio cholerae HE-25]
gi|422305525|ref|ZP_16392726.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
CP1035(8)]
gi|340049711|gb|EGR10624.1| putative GTP-binding protein EngB [Vibrio cholerae HE48]
gi|395956836|gb|EJH67426.1| putative GTP-binding protein EngB [Vibrio cholerae HE-25]
gi|408628623|gb|EKL01354.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
CP1035(8)]
Length = 220
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|153830625|ref|ZP_01983292.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148873897|gb|EDL72032.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 220
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|229525007|ref|ZP_04414412.1| GTP-binding protein EngB [Vibrio cholerae bv. albensis VL426]
gi|229338588|gb|EEO03605.1| GTP-binding protein EngB [Vibrio cholerae bv. albensis VL426]
Length = 220
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|229527147|ref|ZP_04416541.1| GTP-binding protein EngB [Vibrio cholerae 12129(1)]
gi|229335378|gb|EEO00861.1| GTP-binding protein EngB [Vibrio cholerae 12129(1)]
Length = 220
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|15239069|ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|7573405|emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|16648724|gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana]
gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana]
gi|332004301|gb|AED91684.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 76/124 (61%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
PA LPE A GRSNVGKSS+LN+L R+ + TS KPG TQ IN F++ K LVDLPG
Sbjct: 131 PADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLVDLPG 190
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YG+A A E+K W + K+Y R +L V LL+D VKP D E S + ++Q
Sbjct: 191 YGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYASWLGQNQVPMT 250
Query: 137 VVLT 140
++ T
Sbjct: 251 LIFT 254
>gi|406675270|ref|ZP_11082459.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC35]
gi|423203186|ref|ZP_17189764.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER39]
gi|404613415|gb|EKB10437.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER39]
gi|404627602|gb|EKB24402.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC35]
Length = 218
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK+ F +A P EIAFAGRSN GKSS LN LT+ + RTS PG TQ IN
Sbjct: 9 NKVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+L LVDLPGYG+A E+K W++ + EY+ R SLK + +L+D + +K D
Sbjct: 69 LFELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ Q ++LTK D + P + +++ +++ S +Q V SS + G
Sbjct: 129 MNMLEWSSHRQLPVMLLLTKADKLSPGPRNNQVIKVRQAVANLGSQIQ-VEAFSSLTNIG 187
Query: 182 IRSLRTVLSK 191
+ L L++
Sbjct: 188 VEKLAQTLTE 197
>gi|419827811|ref|ZP_14351304.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-1A2]
gi|419831472|ref|ZP_14354942.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-61A2]
gi|422915843|ref|ZP_16950200.1| putative GTP-binding protein EngB [Vibrio cholerae HC-02A1]
gi|423810750|ref|ZP_17714792.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-55C2]
gi|423845610|ref|ZP_17718566.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-59A1]
gi|423877822|ref|ZP_17722195.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-60A1]
gi|423996014|ref|ZP_17739534.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-02C1]
gi|424014927|ref|ZP_17754818.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-55B2]
gi|424018070|ref|ZP_17757883.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-59B1]
gi|424623449|ref|ZP_18061937.1| putative GTP-binding protein EngB [Vibrio cholerae HC-50A1]
gi|424628020|ref|ZP_18066343.1| putative GTP-binding protein EngB [Vibrio cholerae HC-51A1]
gi|424631969|ref|ZP_18070101.1| putative GTP-binding protein EngB [Vibrio cholerae HC-52A1]
gi|424635055|ref|ZP_18073089.1| putative GTP-binding protein EngB [Vibrio cholerae HC-55A1]
gi|424638881|ref|ZP_18076789.1| putative GTP-binding protein EngB [Vibrio cholerae HC-56A1]
gi|424647133|ref|ZP_18084824.1| putative GTP-binding protein EngB [Vibrio cholerae HC-57A1]
gi|443526007|ref|ZP_21092110.1| putative GTP-binding protein EngB [Vibrio cholerae HC-78A1]
gi|341641863|gb|EGS66380.1| putative GTP-binding protein EngB [Vibrio cholerae HC-02A1]
gi|408017449|gb|EKG54952.1| putative GTP-binding protein EngB [Vibrio cholerae HC-50A1]
gi|408023039|gb|EKG60220.1| putative GTP-binding protein EngB [Vibrio cholerae HC-52A1]
gi|408028242|gb|EKG65147.1| putative GTP-binding protein EngB [Vibrio cholerae HC-56A1]
gi|408028626|gb|EKG65501.1| putative GTP-binding protein EngB [Vibrio cholerae HC-55A1]
gi|408038545|gb|EKG74882.1| putative GTP-binding protein EngB [Vibrio cholerae HC-57A1]
gi|408059976|gb|EKG94703.1| putative GTP-binding protein EngB [Vibrio cholerae HC-51A1]
gi|408624562|gb|EKK97506.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-1A2]
gi|408637383|gb|EKL09445.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-55C2]
gi|408645132|gb|EKL16798.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-60A1]
gi|408646318|gb|EKL17932.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-59A1]
gi|408652621|gb|EKL23831.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-61A2]
gi|408855520|gb|EKL95221.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-02C1]
gi|408862798|gb|EKM02299.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-55B2]
gi|408871454|gb|EKM10694.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HC-59B1]
gi|443455642|gb|ELT19406.1| putative GTP-binding protein EngB [Vibrio cholerae HC-78A1]
Length = 220
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKGLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|21592799|gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 76/124 (61%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
PA LPE A GRSNVGKSS+LN+L R+ + TS KPG TQ IN F++ K LVDLPG
Sbjct: 131 PADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLVDLPG 190
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YG+A A E+K W + K+Y R +L V LL+D VKP D E S + ++Q
Sbjct: 191 YGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYASWLGQNQVPMT 250
Query: 137 VVLT 140
++ T
Sbjct: 251 LIFT 254
>gi|255082732|ref|XP_002504352.1| predicted protein [Micromonas sp. RCC299]
gi|226519620|gb|ACO65610.1| predicted protein [Micromonas sp. RCC299]
Length = 195
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 88/165 (53%), Gaps = 9/165 (5%)
Query: 1 MNKLEFFAAAKVSSSFPAPD-LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQT 59
M K+EF +A + + P PD LPE+A GRSNVGKSS+LN LT+ S KPG TQ
Sbjct: 1 MQKVEFVSATEDADDCPPPDGLPEVAVIGRSNVGKSSLLNLLTKGKSGALVSSKPGTTQH 60
Query: 60 INFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
IN + + K +VDLPGYGFA A +E + W+ KEY +TR +L V LLID
Sbjct: 61 INHYLVAKKWWIVDLPGYGFAKASKESTEMWDRFTKEYFTTRSNLAGVLLLIDASIPPME 120
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFP--------IDVARRAMQ 156
+D E + + +V TK D P ID RR +
Sbjct: 121 KDLEYADWLITHNVPFTIVHTKCDRNKPGMPAVDTNIDELRRILD 165
>gi|373488061|ref|ZP_09578727.1| ribosome biogenesis GTP-binding protein YsxC [Holophaga foetida DSM
6591]
gi|372007835|gb|EHP08464.1| ribosome biogenesis GTP-binding protein YsxC [Holophaga foetida DSM
6591]
Length = 196
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 7/166 (4%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYA 82
E+AF GRSNVGKSS+LNAL + + R S PG T+ IN F G +VDLPGYGFA
Sbjct: 26 EVAFVGRSNVGKSSLLNALAQHTQLARVSKTPGRTRLINVFVTGPDRWIVDLPGYGFATG 85
Query: 83 KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKT 142
K W+E+++ Y++ R +L+ V +L+D + G DH++I + ++ ++V TK
Sbjct: 86 PVAEKAKWQEMIEGYLTGRKTLRMVYVLVDAEVGATKLDHQMIDWLRHTEIPCRIVATKC 145
Query: 143 DTVFPIDVARRAMQIEESLKANNSLVQP--VMMVSSKSGAGIRSLR 186
D V P +R+ Q + A + ++QP + VSS G G+ LR
Sbjct: 146 DKVKP---SRQLAQRRDV--AASLMLQPTDIAWVSSSKGTGMTDLR 186
>gi|375258172|ref|YP_005017342.1| GTP-binding protein YsxC [Klebsiella oxytoca KCTC 1686]
gi|397655104|ref|YP_006495806.1| GTP-binding protein EngB [Klebsiella oxytoca E718]
gi|402844147|ref|ZP_10892520.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. OBRC7]
gi|423105653|ref|ZP_17093355.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5242]
gi|365907650|gb|AEX03103.1| GTP-binding protein YsxC [Klebsiella oxytoca KCTC 1686]
gi|376379897|gb|EHS92646.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5242]
gi|394343857|gb|AFN29978.1| GTP-binding protein EngB [Klebsiella oxytoca E718]
gi|402275554|gb|EJU24702.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. OBRC7]
Length = 210
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IQWAVESDIPVLVLLTKADKL--ASGARKAQIAMVREAVTAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|337755589|ref|YP_004648100.1| GTP-binding protein EngB [Francisella sp. TX077308]
gi|336447194|gb|AEI36500.1| GTP-binding protein EngB [Francisella sp. TX077308]
Length = 188
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
AAKVS P + E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 1 MGAAKVSQ-LPEDNGIEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLG 59
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
LVDLPGYG+A E +K W+ ++ Y++ R L + LL+D++ +K D +I
Sbjct: 60 DNKRLVDLPGYGYAKVSEAIKRLWQSEMESYLTLRKCLGGIVLLVDSRHNLKEFDSLMIE 119
Query: 127 LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++LTK D + + A+ IE LK
Sbjct: 120 MAISFDLNLHILLTKADKLNNKERAQANRMIESFLK 155
>gi|206575834|ref|YP_002241256.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae
342]
gi|288937895|ref|YP_003441954.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella variicola
At-22]
gi|290513118|ref|ZP_06552481.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp.
1_1_55]
gi|238058986|sp|B5XZJ3.1|ENGB_KLEP3 RecName: Full=Probable GTP-binding protein EngB
gi|206564892|gb|ACI06668.1| putative GTP-binding protein EngB [Klebsiella pneumoniae 342]
gi|288892604|gb|ADC60922.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella variicola
At-22]
gi|289774500|gb|EFD82505.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp.
1_1_55]
Length = 210
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N +Q V SS +G+
Sbjct: 130 IEWAVESDIQVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDIQ-VEPFSSLKKSGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|317470367|ref|ZP_07929758.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp.
3_2_56FAA]
gi|316902171|gb|EFV24094.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp.
3_2_56FAA]
Length = 204
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 2/170 (1%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P + PE+AFAG+SNVGKSS++NAL + R S +PG TQTIN++ + +L
Sbjct: 14 ITSKLPDNEFPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTINYYNINEELYY 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A E VK+ W +++ Y+ T LK V LLID + D + + +
Sbjct: 74 VDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKNDVMMYDWIVHN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ TK+D + + + +I + L+ N PV SS S G
Sbjct: 134 GYHPVIIATKSDKLKRSQLPKHVKEIRQELRLNKE--TPVFPFSSLSKQG 181
>gi|260767539|ref|ZP_05876475.1| GTP-binding protein EngB [Vibrio furnissii CIP 102972]
gi|260617439|gb|EEX42622.1| GTP-binding protein EngB [Vibrio furnissii CIP 102972]
Length = 224
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPTDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VTEGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ QV+LTK D + + +++ E+ A VQ V SS +G G+
Sbjct: 131 VVWAVECGIPVQVLLTKADKLKSGARKAQVLKVREAALAFGGDVQ-VDAFSSHNGIGVDV 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRNKLD 195
>gi|289168391|ref|YP_003446660.1| hypothetical protein smi_1558 [Streptococcus mitis B6]
gi|288907958|emb|CBJ22798.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 197
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 11 EILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 71 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 131 YEFLKYYEIPVIIVATKADKI 151
>gi|440289772|ref|YP_007342537.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Enterobacteriaceae bacterium strain FGI 57]
gi|440049294|gb|AGB80352.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Enterobacteriaceae bacterium strain FGI 57]
Length = 211
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKIKWQRALGEYLEKRLCLKGIVILMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IQWAVDSEIEVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|366089338|ref|ZP_09455811.1| GTP-binding protein [Lactobacillus acidipiscis KCTC 13900]
Length = 194
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 83/132 (62%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
+ +P PEIAFAGRSNVGKSS++NAL + RTS +PG TQT+NF+ + ++L VD
Sbjct: 16 NQYPTEGYPEIAFAGRSNVGKSSLINALINRKSFARTSSQPGKTQTLNFYDVESQLFFVD 75
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A ++ +D W +++ Y+S+R L+ V L+D + D ++++L+
Sbjct: 76 VPGYGYAKVSQKERDKWGAMIETYLSSRDQLQGVVSLVDARHAPTKLDQQMVNLLHYYDL 135
Query: 134 KYQVVLTKTDTV 145
VV TK D V
Sbjct: 136 PILVVGTKIDKV 147
>gi|423204420|ref|ZP_17190976.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC34]
gi|404627285|gb|EKB24090.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC34]
Length = 218
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK+ F +A P EIAFAGRSN GKSS LN LT+ + RTS PG TQ IN
Sbjct: 9 NKVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+L LVDLPGYG+A E+K W++ + EY+ R SLK + +L+D + +K D
Sbjct: 69 LFELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ Q ++LTK D + P + +++ +++ S +Q V SS + G
Sbjct: 129 MNMLEWSSHRQLPVMLLLTKADKLSPGPRNNQVIKVRQAVANLGSQIQ-VEAFSSLTHIG 187
Query: 182 IRSLRTVLSK 191
+ L L++
Sbjct: 188 VEKLAQTLTE 197
>gi|334136423|ref|ZP_08509889.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF7]
gi|333606033|gb|EGL17381.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF7]
Length = 213
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N+ EF +A +P LPEIA AGRSNVGKSS++N + + + RTS +PG TQT+
Sbjct: 3 VNQAEFIISAVGPGQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSSQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++++ L VDLPGYG+A + + W + ++ Y+ R LK V L+D +
Sbjct: 63 NYYRINDDLYFVDLPGYGYAKVSKTKRAEWGKFIENYLLKREPLKAVMQLVDLRHPPSKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ VV TK D V + A I++ L+ + S P ++ SS++G
Sbjct: 123 DQAMYTWLKHMDVPVIVVATKADKVPKGKWQKHAKIIKDDLEFDRS--GPFIIFSSETGM 180
Query: 181 GIRSLRTVL 189
G L +L
Sbjct: 181 GKDELWEIL 189
>gi|56707761|ref|YP_169657.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670232|ref|YP_666789.1| ribosome biogenesis GTP-binding protein YsxC [Francisella
tularensis subsp. tularensis FSC198]
gi|254370264|ref|ZP_04986269.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874574|ref|ZP_05247284.1| GTP-binding protein engB [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379717011|ref|YP_005305347.1| GTP-binding protein EngB [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725615|ref|YP_005317801.1| GTP-binding protein EngB [Francisella tularensis subsp. tularensis
TI0902]
gi|385794397|ref|YP_005830803.1| GTPase EngB [Francisella tularensis subsp. tularensis NE061598]
gi|421755266|ref|ZP_16192216.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
80700075]
gi|81597736|sp|Q5NH35.1|ENGB_FRATT RecName: Full=Probable GTP-binding protein EngB
gi|119369196|sp|Q14II7.1|ENGB_FRAT1 RecName: Full=Probable GTP-binding protein EngB
gi|56604253|emb|CAG45269.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320565|emb|CAL08652.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis
FSC198]
gi|151568507|gb|EDN34161.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254840573|gb|EET19009.1| GTP-binding protein engB [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158932|gb|ADA78323.1| GTPase EngB [Francisella tularensis subsp. tularensis NE061598]
gi|377827064|gb|AFB80312.1| GTP-binding protein EngB [Francisella tularensis subsp. tularensis
TI0902]
gi|377828688|gb|AFB78767.1| GTP-binding protein EngB [Francisella tularensis subsp. tularensis
TIGB03]
gi|409088601|gb|EKM88665.1| GTP-binding protein YsxC [Francisella tularensis subsp. tularensis
80700075]
Length = 197
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Query: 8 AAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT 67
AAKVS P E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 11 GAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGN 69
Query: 68 KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISL 127
LVDLPGYG+A E +K W+ ++ Y+++R L + LL+D + +K D +I +
Sbjct: 70 NNRLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDLRHELKEFDSLMIEM 129
Query: 128 MERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++LTK D + + A+ IE LK
Sbjct: 130 AISFDLNLHILLTKADKLNNKERAQANRMIESFLK 164
>gi|373106648|ref|ZP_09520948.1| ribosome biogenesis GTP-binding protein YsxC [Stomatobaculum
longum]
gi|371651587|gb|EHO17013.1| ribosome biogenesis GTP-binding protein YsxC [Stomatobaculum
longum]
Length = 223
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 2/187 (1%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
V+S+ P LPE AFAG+SNVGKSS+LNAL + + RTS +PG TQTINF+++ +
Sbjct: 36 VTSALPESVLPEFAFAGKSNVGKSSLLNALVNRKALARTSAQPGKTQTINFYRVNGAVYF 95
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A A E VK +W ++++ Y+ L+ V LL+D + D + + +
Sbjct: 96 VDLPGYGYASASEAVKASWGKMIERYLHEDKQLRAVFLLLDLRHAPSENDVLMYNWIIDQ 155
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+V TK D + + ++ + E+L A P+++ SS + G L ++++
Sbjct: 156 GLPAVLVGTKADKLKRSQLEKQKKLLRETLGAPKE--TPLILFSSVTKQGREELLRLVAE 213
Query: 192 IARFAKV 198
+A+ A V
Sbjct: 214 MAKQASV 220
>gi|418974480|ref|ZP_13522390.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK1074]
gi|383348907|gb|EID26859.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK1074]
Length = 195
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++ + +V TK D + + I++ L N L ++ SS S AG+
Sbjct: 129 YEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKL--NFDLSDDFILFSSVSKAGM 184
>gi|300771784|ref|ZP_07081655.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761170|gb|EFK57995.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium
spiritivorum ATCC 33861]
Length = 207
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF + P P LPE AF GRSNVGKSS++NA+T + G+ +TS KPG TQ IN
Sbjct: 5 KAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLINH 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + + LVDLPGYGFA + + W++ ++ Y++ R +L+ V +LID++ + D
Sbjct: 65 FIINDEWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKIDL 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ + + ++ TK D + + +SL V P + S+++ G
Sbjct: 125 DFCCWLGECGLPFMLIFTKADKQSAVKSDVNIAKFRKSLLQWFEEVPPHFLTSAETKTGC 184
Query: 183 RSLRTVLSKI-ARF 195
+ +++ I RF
Sbjct: 185 EPILEMINDINTRF 198
>gi|15838031|ref|NP_298719.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
9a5c]
gi|9106445|gb|AAF84239.1|AE003973_7 GTP-binding protein [Xylella fastidiosa 9a5c]
Length = 229
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 15/201 (7%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ +A + PA D E+AFAGRSN GKSS+LN LTRQ + R S PG TQ + +F
Sbjct: 35 KYLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFT 94
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A +E++ W+ + Y R +L+ + +++D + +K D ++
Sbjct: 95 VTPQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQM 154
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP------VMMVSSKS 178
++ + Q +LTK D + R Q + K N L + + SSKS
Sbjct: 155 LAYARQRGLPAQALLTKADKL------GRGQQAQTLQKVRNELTKHFADHINIQTFSSKS 208
Query: 179 GAGIRSLRTVLSK---IARFA 196
G+ L TV+ +AR A
Sbjct: 209 RQGVEQLHTVIETWLGLARLA 229
>gi|268611238|ref|ZP_06144965.1| hypothetical protein RflaF_17292 [Ruminococcus flavefaciens FD-1]
Length = 202
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK EF AA S PAP+ EIAFAG SNVGKS+++N L + + R S PG T TIN
Sbjct: 6 NKAEFSAAYGKFSQIPAPERIEIAFAGHSNVGKSTLINKLFNRKNLARVSSVPGKTATIN 65
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+ L L VDLPGYG+A + K+ W L++ Y+S+ ++ V +L+D + D
Sbjct: 66 FYGL-ENLYFVDLPGYGYAKVSKSEKERWAGLIEGYLSSDRDIRLVFMLVDMRHAPTKDD 124
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV--SSKSG 179
+I+ + ++ + +VLTK D + + A+R E+ K + + + SS++
Sbjct: 125 IHMINYLIDTEMPFVLVLTKADKLNKTERAKRI----EAFKDEIPCFEDIHSIPFSSQTF 180
Query: 180 AGIRSLRTVLSKIA 193
G+ LR ++ IA
Sbjct: 181 EGVEELRAIVEDIA 194
>gi|255658242|ref|ZP_05403651.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida
DSM 20544]
gi|260849552|gb|EEX69559.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida
DSM 20544]
Length = 234
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 94/175 (53%), Gaps = 20/175 (11%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ A+A +P +LPE+ F GRSNVGKSS++N+LTR G+ R S +PG TQTINFF+
Sbjct: 34 KYIASAVKKDQYPERELPEVVFIGRSNVGKSSLINSLTRIRGLARVSSQPGKTQTINFFE 93
Query: 65 LGTKL--------------CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLL 110
L KL LVDLPGYG+A +E + W++ + EY+ T L+ VC L
Sbjct: 94 LTAKLRDPESGEEQGRKDFYLVDLPGYGYAKTGKERRKIWKKFIDEYLLTSPQLQFVCQL 153
Query: 111 IDTKWGVKPRDHELISLMERSQTKYQVVLTKTDTVFP------IDVARRAMQIEE 159
ID + D E+ + ++ TK D + I RRA+ ++E
Sbjct: 154 IDIRHEPMASDVEMFQWLVEHHVPVLIIATKADKIGKNARQKNIAAIRRALGVKE 208
>gi|392546880|ref|ZP_10294017.1| GTP-binding protein YsxC [Pseudoalteromonas rubra ATCC 29570]
Length = 209
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
N+ +F +A S PA E+AFAGRSN GKSS LNALT Q + RTS PG TQ IN
Sbjct: 4 NRAQFVTSAPDISRLPADTGIEVAFAGRSNAGKSSALNALTDQ-KLARTSKTPGRTQLIN 62
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F L L+DLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D
Sbjct: 63 TFSLDEDKRLIDLPGYGFAKVPLEMKKKWQKSLGEYLQKRQSLKGIVVLMDIRHPLKDLD 122
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+LI+ S +LTK D + +Q+ ++L N+ + V SS G G
Sbjct: 123 MDLINWAAGSDIPVLALLTKADKLKQGKRKAEVLQVRKALAELNADIT-VHAFSSLKGLG 181
Query: 182 IRSL 185
++ L
Sbjct: 182 LKEL 185
>gi|392959647|ref|ZP_10325129.1| GTP-binding protein engB [Pelosinus fermentans DSM 17108]
gi|421052487|ref|ZP_15515476.1| ribosome biogenesis GTP-binding protein YsxC [Pelosinus fermentans
B4]
gi|421058672|ref|ZP_15521339.1| GTP-binding protein engB [Pelosinus fermentans B3]
gi|421066379|ref|ZP_15527993.1| GTP-binding protein engB [Pelosinus fermentans A12]
gi|421070557|ref|ZP_15531689.1| GTP-binding protein engB [Pelosinus fermentans A11]
gi|392443218|gb|EIW20769.1| ribosome biogenesis GTP-binding protein YsxC [Pelosinus fermentans
B4]
gi|392448183|gb|EIW25386.1| GTP-binding protein engB [Pelosinus fermentans A11]
gi|392456200|gb|EIW32954.1| GTP-binding protein engB [Pelosinus fermentans DSM 17108]
gi|392456271|gb|EIW33022.1| GTP-binding protein engB [Pelosinus fermentans A12]
gi|392460327|gb|EIW36642.1| GTP-binding protein engB [Pelosinus fermentans B3]
Length = 211
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ A+A +P +L EIAF GRSNVGKSS++N+L+R+ G+ RTS PG TQT+NF+K
Sbjct: 16 QYIASAVKIDQYPEGELHEIAFMGRSNVGKSSLINSLSRRNGLARTSGSPGKTQTLNFYK 75
Query: 65 LGTKLC--------LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
L KL LVDLPGYG+A + + W + ++EY+ L+ VC LID +
Sbjct: 76 LMAKLSDTDKRDFFLVDLPGYGYARTGKSNRQQWAKFIEEYLLKSPRLQLVCQLIDIRHD 135
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
D + + QV+ TK D + + V + I + L ++ SS
Sbjct: 136 PMQSDISAYKWLIENDVPVQVIATKADKLNRMAVKKNVEAIRKGLGMKGD---HIIAYSS 192
Query: 177 KSGAGIRSLRTVLSKI 192
+ G G L V+ +I
Sbjct: 193 EKGLGRPELLDVIGQI 208
>gi|383754370|ref|YP_005433273.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366422|dbj|BAL83250.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 207
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ A+A +P DLPEI F GRSNVGKSS++N+LTR + R S +PG TQTINFF+
Sbjct: 11 QYVASAVKKDQYPEGDLPEIVFIGRSNVGKSSLINSLTRVNNLARVSSQPGKTQTINFFE 70
Query: 65 LGTKL---------CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKW 115
+G K+ LVDLPGYG+A +E + W + ++EY+ L VC LID++
Sbjct: 71 VGVKIEEAEERKAFYLVDLPGYGYAKTGKEKRKIWSKFIEEYLLNSPRLSFVCQLIDSRH 130
Query: 116 GVKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
D E+ + + + ++ TK D + + A+ I+ L
Sbjct: 131 EPMASDVEMFNWLVDNGLPVLIIATKVDKIGKNERAKNIAAIKRKL 176
>gi|256819259|ref|YP_003140538.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea DSM 7271]
gi|256580842|gb|ACU91977.1| GTP-binding protein HSR1-related [Capnocytophaga ochracea DSM 7271]
Length = 200
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 98/194 (50%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + S P +LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKDNLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A +E K +++ + +Y R L +L+D + +
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + +V TK D + P+ + R ++ L P + S+++
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYFITSAENKT 181
Query: 181 GIRSLRTVLSKIAR 194
G L + +I +
Sbjct: 182 GKEELTHYIEQINK 195
>gi|58697268|ref|ZP_00372648.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans]
gi|225630063|ref|YP_002726854.1| GTP-binding protein [Wolbachia sp. wRi]
gi|254783220|sp|C0R5M1.1|ENGB_WOLWR RecName: Full=Probable GTP-binding protein EngB
gi|58536385|gb|EAL59835.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans]
gi|225592044|gb|ACN95063.1| GTP-binding protein [Wolbachia sp. wRi]
Length = 197
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL- 65
F A+ + S P PEIAFAGRSNVGKSS++N L R S KPG T+ INF+ +
Sbjct: 13 FGASDIKS-LPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMY 71
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K LVDLPGYG+++A +E + L++ Y+ R +L+RV +LID+K G+K D + I
Sbjct: 72 NDKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLIDSKVGLKEIDKDFI 131
Query: 126 SLMERSQTKYQVVLTKTDTV 145
+ + + VVLTK D V
Sbjct: 132 YWLICNNINFNVVLTKIDKV 151
>gi|300727729|ref|ZP_07061115.1| GTP-binding protein [Prevotella bryantii B14]
gi|299775017|gb|EFI71623.1| GTP-binding protein [Prevotella bryantii B14]
Length = 200
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 95/181 (52%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A S P + PE AF GRSNVGKSS++N L G+ +TS PG T I
Sbjct: 3 IKKSEFTISAPTVSKCPKDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F + + LVDLPGYGFA + V+ E+++ Y+ R L V +LID + +
Sbjct: 63 NHFIINNEWYLVDLPGYGFAKRSKSVQQKLEQMISSYILQRQQLYNVFVLIDVRHEQQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + +SQ + +V TK D + P+ + A + L+ + P + SS+
Sbjct: 123 DREFVDWLGKSQIPFAIVFTKADKLGPVKAKKNAEAWMKQLQDTWEDLPPYFITSSEKKL 182
Query: 181 G 181
G
Sbjct: 183 G 183
>gi|406660680|ref|ZP_11068810.1| putative GTP-binding protein EngB [Cecembia lonarensis LW9]
gi|405555599|gb|EKB50615.1| putative GTP-binding protein EngB [Cecembia lonarensis LW9]
Length = 226
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 79/127 (62%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
PAP +PE AF GRSNVGKSS++N LT + +TS KPG TQ IN F + LVDLPG
Sbjct: 42 PAPVMPEFAFIGRSNVGKSSLVNMLTNNKNLAKTSGKPGKTQLINHFLINDNWYLVDLPG 101
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YGFA + ++ WE+++ +Y+ R +L VC+LID++ + D E I+ +
Sbjct: 102 YGFAKVSKSIQSTWEKMISDYLIHRENLVAVCVLIDSRLDPQKIDIEFITWCGEQGIPFV 161
Query: 137 VVLTKTD 143
++ TK+D
Sbjct: 162 LIFTKSD 168
>gi|421074046|ref|ZP_15535088.1| GTP-binding protein engB [Pelosinus fermentans JBW45]
gi|392527843|gb|EIW50927.1| GTP-binding protein engB [Pelosinus fermentans JBW45]
Length = 211
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ A+A +P +L EIAF GRSNVGKSS++N+L+R+ G+ RTS PG TQT+NF+K
Sbjct: 16 QYIASAVKIDQYPEGELHEIAFMGRSNVGKSSLINSLSRRNGLARTSGSPGKTQTLNFYK 75
Query: 65 LGTKLC--------LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWG 116
L KL LVDLPGYG+A + + W + ++EY+ L+ VC LID +
Sbjct: 76 LMAKLSDTDKRDFFLVDLPGYGYARTGKSNRQQWAKFIEEYLLKSPRLQLVCQLIDIRHD 135
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
D + + QV+ TK D + + V + I + L ++ SS
Sbjct: 136 PMDSDISAYKWLIENDVPVQVIATKADKLNRMAVKKNVEAIRKGLGMKGD---HIIAYSS 192
Query: 177 KSGAGIRSLRTVLSKI 192
+ G G L V+ +I
Sbjct: 193 EKGLGRPELLDVIGQI 208
>gi|311281672|ref|YP_003943903.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cloacae
SCF1]
gi|308750867|gb|ADO50619.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cloacae
SCF1]
Length = 208
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E+ A N VQ V SS G+
Sbjct: 130 IEWAVDSGIQVLVLLTKADKL--ASGARKAQLNMVREAATAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLREKLD 194
>gi|420149698|ref|ZP_14656869.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 335 str. F0486]
gi|394753289|gb|EJF36857.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 335 str. F0486]
Length = 199
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + S P +LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A +E K +++ + +Y R L +L+D + +
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + +V TK D + P+ + R + ++ L P + S+++
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLVIERNIVAYQQVLLETWEDFPPYFITSAENKT 181
Query: 181 GIRSLRTVLSKIAR 194
G L + +I +
Sbjct: 182 GKEELTHYIEQINK 195
>gi|387016272|gb|AFJ50255.1| GTP-binding protein 8-like [Crotalus adamanteus]
Length = 292
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 18 APDL--PEIAFAGRSNVGKSSMLNALTRQWG--VVRTSDKPGLTQTINFFKLGTKLCLVD 73
AP + PE+ F GRSNVGKSS++ AL VR S PG T+ +NFFK+G LVD
Sbjct: 109 APQMSEPEVCFLGRSNVGKSSLIKALFSLAPDVEVRISKHPGHTKKMNFFKVGKLFTLVD 168
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYGF K+ + E+V+ Y++ R +LKR LL+D K G++ D+ + ++E
Sbjct: 169 MPGYGFNAPKD-----FAEMVEPYLTQRTNLKRTFLLVDAKEGIQEMDNIALEMLEEFGI 223
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMM-VSSKSGAGIRSLRTVLSKI 192
Y +VLTK D +A+ +QI++ ++ N P + +SS + GI LR ++ +
Sbjct: 224 PYVLVLTKIDKASKSAMAKTVIQIQDFVQKNAHTCFPQLFPISSLNYTGIHVLRCFIAHV 283
>gi|254508264|ref|ZP_05120387.1| GTP-binding protein [Vibrio parahaemolyticus 16]
gi|219548781|gb|EED25783.1| GTP-binding protein [Vibrio parahaemolyticus 16]
Length = 225
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A + PA + E+AFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRALPADEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D +L
Sbjct: 75 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + ++I++ V V SS G G+ +
Sbjct: 135 IFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGFGGDVS-VAAFSSLKGIGVDT 193
Query: 185 LRTVLSK 191
LR L +
Sbjct: 194 LRNKLDE 200
>gi|387824416|ref|YP_005823887.1| GTP-binding protein EngB [Francisella cf. novicida 3523]
gi|328676015|gb|AEB28690.1| GTP-binding protein EngB [Francisella cf. novicida 3523]
Length = 197
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 8 AAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT 67
AAKVS P E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 11 GAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGD 69
Query: 68 KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISL 127
LVDLPGYG+A E +K W+ ++ Y+++R L + LL+D++ +K D +I +
Sbjct: 70 NKRLVDLPGYGYAKVSETIKRQWQSEMENYLTSRKCLNGIVLLVDSRHELKEFDSLMIEM 129
Query: 128 MERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++LTK D + + A+ IE LK
Sbjct: 130 AISFGLNLHILLTKADKLNNKERAQANRMIESFLK 164
>gi|303291125|ref|XP_003064849.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453875|gb|EEH51183.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPD-LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQT 59
M K++F +A + + PAPD LPE+A GRSNVGKSS+LN LT S KPG TQ
Sbjct: 2 MRKVQFVSATEDADDCPAPDGLPEVALIGRSNVGKSSLLNLLTEGASGALVSSKPGTTQR 61
Query: 60 INFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
IN + + K +VDLPGYG+A A E+ WE K+Y TR +L V LLID +
Sbjct: 62 INHYLVNHKWWIVDLPGYGYAEATEDETAKWEAFTKDYFVTRSNLAGVLLLIDASVPPQA 121
Query: 120 RDHELISLMERSQTKYQVVLTKTD 143
+D E + + + +V TK D
Sbjct: 122 KDAEYADWLIENNVPFTIVFTKCD 145
>gi|315224700|ref|ZP_07866523.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea F0287]
gi|420160119|ref|ZP_14666908.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea str. Holt 25]
gi|314945328|gb|EFS97354.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea F0287]
gi|394761107|gb|EJF43544.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea str. Holt 25]
Length = 201
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 97/192 (50%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + S P +LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A +E K +++ + +Y R L +L+D + +
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + +V TK D + P+ + R ++ L P + S+++
Sbjct: 122 DVEFMQWLGEHSIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYFVTSAENKT 181
Query: 181 GIRSLRTVLSKI 192
G L + +I
Sbjct: 182 GKEELTHYIEQI 193
>gi|42520140|ref|NP_966055.1| ribosome biogenesis GTP-binding protein YsxC [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|81652806|sp|Q73IC3.1|ENGB_WOLPM RecName: Full=Probable GTP-binding protein EngB
gi|42409877|gb|AAS13989.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 197
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL- 65
F A+ + S P PEIAFAGRSNVGKSS++N L R S KPG T+ INF+ +
Sbjct: 13 FGASDIKS-LPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMY 71
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K LVDLPGYG+++A +E + L++ Y+ R +L+RV +LID+K G+K D + I
Sbjct: 72 DDKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRENLRRVFVLIDSKVGLKEIDKDFI 131
Query: 126 SLMERSQTKYQVVLTKTDTV 145
+ + + +VLTK D V
Sbjct: 132 YWLIYNNINFNIVLTKIDKV 151
>gi|297583716|ref|YP_003699496.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
selenitireducens MLS10]
gi|297142173|gb|ADH98930.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
selenitireducens MLS10]
Length = 212
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N+ E +A FP +PE+A +GRSNVGKSS +N L + G+ RTS +PG TQT+
Sbjct: 3 VNQAELVISAAKQDQFPGTMIPEVALSGRSNVGKSSFINTLINRKGLARTSQRPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + + VD+PGYG+A + + AW + ++ Y S+R L V LID++ KP
Sbjct: 63 NFYIINDRFHFVDVPGYGYAKVSKAERAAWGKTLELYFSSREQLNGVVQLIDSR--HKPS 120
Query: 121 DHELISLMERSQTKYQVVL--TKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKS 178
+ +++ ++VVL TK D + A+ QI L N P++M SS++
Sbjct: 121 EDDILMYDWLKHHGHKVVLIATKCDKIPRGKWAKSKKQISGDL--NRDPSDPLIMFSSET 178
Query: 179 GAG 181
G G
Sbjct: 179 GQG 181
>gi|429755348|ref|ZP_19288008.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 324 str. F0483]
gi|429174876|gb|EKY16341.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 324 str. F0483]
Length = 201
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 97/192 (50%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + S P +LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A +E K +++ + +Y R L +L+D + +
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + +V TK D + P+ + R ++ L P + S+++
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYFITSAENKT 181
Query: 181 GIRSLRTVLSKI 192
G L + +I
Sbjct: 182 GKEELTHYIEQI 193
>gi|359411829|ref|ZP_09204294.1| GTP-binding protein engB [Clostridium sp. DL-VIII]
gi|357170713|gb|EHI98887.1| GTP-binding protein engB [Clostridium sp. DL-VIII]
Length = 198
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF +A + +P + E+AF GRSNVGKSS++N+LT + + + S PG T+ +NF
Sbjct: 5 KSEFITSAVKKNQYPVDNRVEVAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRLVNF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + LVDLPGYG+A ++ KD+W + V+ Y+S R LKRV LL+D++ KP +
Sbjct: 65 FLINDDFYLVDLPGYGYAKVSKQEKDSWGKTVEMYLSGREQLKRVVLLVDSRH--KPTND 122
Query: 123 ELISLMERSQTKYQVVL--TKTDTVFPIDVARRAMQIEESLKANNS 166
++I Y V++ TK+D + ++ + I E+LK N+
Sbjct: 123 DIIMHEWIKHFGYDVIVVATKSDKLTRNNLKKSEKVIMETLKLGNN 168
>gi|119369192|sp|Q0TAJ6.2|ENGB_ECOL5 RecName: Full=Probable GTP-binding protein EngB
Length = 210
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTKTD + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKTDKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|94270231|ref|ZP_01291683.1| GTP-binding [delta proteobacterium MLMS-1]
gi|93450888|gb|EAT01901.1| GTP-binding [delta proteobacterium MLMS-1]
Length = 199
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+++ F + + PA +LPEIAFAGRSNVGKSS++N L + +V+ S KPG T+++N
Sbjct: 8 HRVHFVDSVFDLAKLPAGELPEIAFAGRSNVGKSSLINCLLGRKNLVKVSAKPGKTRSLN 67
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+ + +L LVDLPGYG+A + +++ W +LV Y+ R +L+ V ++ID + +K D
Sbjct: 68 FYLVDERLHLVDLPGYGYAKVDKRMQEQWRQLVGGYLEKRDNLRCVVVIIDLRHELKELD 127
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
L + + +V TK D + R+A ++ L + + ++ S+KSG G
Sbjct: 128 RLLAQWLRDIGVAFLLVYTKMDKLSRNQQQRQARLLDGGLGISP---EQRLLFSAKSGEG 184
Query: 182 IRSLRTVLSKIARF 195
L L+K+A F
Sbjct: 185 RPEL---LAKLAAF 195
>gi|54113475|gb|AAV29371.1| NT02FT0759 [synthetic construct]
Length = 197
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Query: 8 AAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT 67
AAKVS P E+AFAGRSN GKSS LN LT Q G+ R S PG TQ IN F LG
Sbjct: 11 GAAKVSQ-LPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGN 69
Query: 68 KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISL 127
LVDLPGYG+A E +K W+ ++ Y+++R L + LL+D + +K D +I +
Sbjct: 70 NNRLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDLRHELKEFDSLMIEM 129
Query: 128 MERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++LTK D + + A+ IE LK
Sbjct: 130 AISFDLNLHILLTKADKLNNKERAQANRMIESFLK 164
>gi|27364347|ref|NP_759875.1| GTP-binding protein YsxC [Vibrio vulnificus CMCP6]
gi|27360466|gb|AAO09402.1| GTP-binding protein EngB [Vibrio vulnificus CMCP6]
Length = 220
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 75 VTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRA--MQIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ QV+LTK D + AR+A +++ + + VQ V + SS G G+
Sbjct: 135 IFWAIESRIPVQVLLTKADKL--KSGARKAELLKVRKLAETFGGDVQ-VDVYSSLKGLGV 191
Query: 183 RSLRTVLS 190
LR L
Sbjct: 192 DQLRAKLD 199
>gi|373462504|ref|ZP_09554223.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella maculosa
OT 289]
gi|371948068|gb|EHO65958.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella maculosa
OT 289]
Length = 198
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 97/192 (50%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF ++ PA + PE AF GRSNVGKSS++N L G+ +TS PG T I
Sbjct: 3 IKKSEFVISSPTVGKCPADNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F + + LVDLPGYGFA + V+ E+++ Y+ R L V +LID + +
Sbjct: 63 NHFIINNEWYLVDLPGYGFAKRSKTVQKKLEQMISSYILQRKQLVNVFVLIDVRHEQQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + S + +V TK D + P + A Q + LK + P + SS+
Sbjct: 123 DREFVDWLGESNVPFTIVFTKADKLTPGKAKQNAAQWLDRLKDRWETLPPYYITSSEKKQ 182
Query: 181 GIRSLRTVLSKI 192
G L + +I
Sbjct: 183 GREELLNYIEEI 194
>gi|119370483|sp|Q7MQ23.2|ENGB_VIBVY RecName: Full=Probable GTP-binding protein EngB
Length = 216
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRA--MQIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ QV+LTK D + AR+A +++ + + VQ V + SS G G+
Sbjct: 131 IFWAIESRIPVQVLLTKADKL--KSGARKAELLKVRKLAETFGGDVQ-VDVYSSLKGLGV 187
Query: 183 RSLRTVLS 190
LR L
Sbjct: 188 DQLRAKLD 195
>gi|384097564|ref|ZP_09998685.1| GTP-binding protein YsxC [Imtechella halotolerans K1]
gi|383837532|gb|EID76932.1| GTP-binding protein YsxC [Imtechella halotolerans K1]
Length = 201
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 89/163 (54%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
P +PE AF GRSNVGKSS++N LT++ G+ +TS +PG TQ IN FK+ LVDLPG
Sbjct: 19 PKEPIPEYAFIGRSNVGKSSLINMLTQRKGLAKTSGRPGKTQLINHFKINNNWFLVDLPG 78
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YG+A + +K+ +++ + +Y R L +LID + + D E + M Q +
Sbjct: 79 YGYARVSKSMKNTFQKFITQYFEKRQQLVSAFVLIDIRHEPQKIDLEFMQWMGEHQIPFS 138
Query: 137 VVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSG 179
++ TK D + P + R + E L + P ++S S
Sbjct: 139 IIFTKADKLKPGAIQRHVKEYESKLLEDAWEEMPNYFITSSSN 181
>gi|260589154|ref|ZP_05855067.1| ribosome biogenesis GTP-binding protein YsxC [Blautia hansenii DSM
20583]
gi|331082570|ref|ZP_08331695.1| GTP-binding protein engB [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540574|gb|EEX21143.1| ribosome biogenesis GTP-binding protein YsxC [Blautia hansenii DSM
20583]
gi|330400548|gb|EGG80178.1| GTP-binding protein engB [Lachnospiraceae bacterium 6_1_63FAA]
Length = 201
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P ++PEIAFAG+SNVGKSS++NAL + + RTS PG TQTINF+ + ++ L
Sbjct: 14 ITSILPENEVPEIAFAGKSNVGKSSLINALMNRKSLARTSASPGKTQTINFYNVNHEMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A + VK+ W +L++ Y+ LK V LLID + D + + +
Sbjct: 74 VDLPGYGYAKVSQSVKEQWGKLIERYLHKSKQLKAVFLLIDIRHKPSENDKTMYDWIVYN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++ TK+D + + ++ I+E L+
Sbjct: 134 GYQPIIIATKSDKLKRSQIQKQLKIIKEGLE 164
>gi|37678371|ref|NP_932980.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio vulnificus
YJ016]
gi|37197110|dbj|BAC92951.1| predicted GTPase [Vibrio vulnificus YJ016]
Length = 220
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 75 VTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRA--MQIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ QV+LTK D + AR+A +++ + + VQ V + SS G G+
Sbjct: 135 IFWAIESRIPVQVLLTKADKL--KSGARKAELLKVRKLAETFGGDVQ-VDVYSSLKGLGV 191
Query: 183 RSLRTVLS 190
LR L
Sbjct: 192 DQLRAKLD 199
>gi|320157740|ref|YP_004190119.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O]
gi|119370482|sp|Q8DDQ8.2|ENGB_VIBVU RecName: Full=Probable GTP-binding protein EngB
gi|319933052|gb|ADV87916.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O]
Length = 216
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRA--MQIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ QV+LTK D + AR+A +++ + + VQ V + SS G G+
Sbjct: 131 IFWAIESRIPVQVLLTKADKL--KSGARKAELLKVRKLAETFGGDVQ-VDVYSSLKGLGV 187
Query: 183 RSLRTVLS 190
LR L
Sbjct: 188 DQLRAKLD 195
>gi|429748081|ref|ZP_19281298.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 380 str. F0488]
gi|429161414|gb|EKY03819.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 380 str. F0488]
Length = 199
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 98/194 (50%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + S P +LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A +E K +++ + +Y R L +L+D + +
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + VV TK D + P+ + R ++ L P + S+++
Sbjct: 122 DVEFMQWLGEHGIPFAVVFTKADKLKPLVIERNIAAYQQVLLETWEEFPPYFVTSAENKT 181
Query: 181 GIRSLRTVLSKIAR 194
G L + +I +
Sbjct: 182 GKEELTHYIEQINK 195
>gi|392427520|ref|YP_006468514.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus acidiphilus SJ4]
gi|391357483|gb|AFM43182.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus acidiphilus SJ4]
Length = 196
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 2/193 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E+ A+A +P DLPEIA AGRSNVGKSS++N + + RT + PG TQT+
Sbjct: 4 IRKAEYVASAVKYEQYPVGDLPEIAMAGRSNVGKSSLINRFLSRKNLARTGNTPGKTQTL 63
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+++ LVDLPGYG+A + V W +++ Y R SL+ V ++D +
Sbjct: 64 NFYRVNDAWFLVDLPGYGYAKVAKSVNAQWGGMMETYFKKRESLRAVIQIVDIRHAPSRE 123
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E+ + Q VV TK D + + I ++L+ ++ V ++ S+++G
Sbjct: 124 DVEMQQWLRMRQIPTMVVATKADKISRGQWLKHLTIIAKALEIDD--VSMILPFSAQTGI 181
Query: 181 GIRSLRTVLSKIA 193
G+ L L ++
Sbjct: 182 GVEELNESLEEMG 194
>gi|147677143|ref|YP_001211358.1| ribosome biogenesis GTP-binding protein YsxC [Pelotomaculum
thermopropionicum SI]
gi|189037182|sp|A5D451.1|ENGB_PELTS RecName: Full=Probable GTP-binding protein EngB
gi|146273240|dbj|BAF58989.1| predicted GTPase [Pelotomaculum thermopropionicum SI]
Length = 198
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A ++ +PA ++PE+A AGRSNVGKSS+LN L + + R S PG T+ INFF
Sbjct: 7 EFITSAAKTADYPAGNIPEVALAGRSNVGKSSLLNRLVNRKSLARISSTPGRTRLINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A + W +V+EY+ TR +LK V LL+D++ D ++
Sbjct: 67 VNGLFRLVDLPGYGYAKVSARERQGWRRMVEEYLKTRENLKGVVLLVDSRHPPTVLDVQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ V TK D + A+ I E L N + +P++ S+++ G
Sbjct: 127 YEWLKYQGIPAAVAATKADKISRSKRAQSLKVIREVL--NLTAKEPLVFFSAETSEGREE 184
Query: 185 LRTVLSK 191
+ V+ +
Sbjct: 185 MLEVIGR 191
>gi|257439111|ref|ZP_05614866.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium
prausnitzii A2-165]
gi|257198489|gb|EEU96773.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium
prausnitzii A2-165]
Length = 203
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK +F A+ +SS P D PE++F+GRSNVGKSS++N L + + R S PG T TIN
Sbjct: 4 NKADFIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTATIN 63
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+++ VDLPGYG+A ++ W++L+ Y + LID + D
Sbjct: 64 FYEVDN-CYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLVQLIDCRHAPSADD 122
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ + Q + V LTK D + +A+ E+ Q V++ S ++G G
Sbjct: 123 LQMLKYLHYHQIPFVVALTKADKLKKSQLAKTQEDFEKVCLPYG--CQKVVLTSGENGYG 180
Query: 182 IRSLRTVLSK 191
I L+ VL++
Sbjct: 181 IPELQAVLNE 190
>gi|168183544|ref|ZP_02618208.1| GTP-binding protein [Clostridium botulinum Bf]
gi|237796683|ref|YP_002864235.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
Ba4 str. 657]
gi|182673313|gb|EDT85274.1| GTP-binding protein [Clostridium botulinum Bf]
gi|229260786|gb|ACQ51819.1| GTP-binding protein [Clostridium botulinum Ba4 str. 657]
Length = 194
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 102/181 (56%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A +P PEIAF GRSNVGKS+++N LT + +V+ S PG T+ I
Sbjct: 5 IKKAEFVISAVKRGQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLI 64
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + + VDLPGYG+A ++ K+ W ++++Y+ R LK++ LL+D++
Sbjct: 65 NFFLINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERNQLKKIVLLVDSRHKPTSD 124
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + VV TK D + D+ + I ++LK + ++++SS S
Sbjct: 125 DINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKMDKD--DKILLISSLSKE 182
Query: 181 G 181
G
Sbjct: 183 G 183
>gi|423111125|ref|ZP_17098820.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5243]
gi|423117137|ref|ZP_17104828.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5245]
gi|376376438|gb|EHS89216.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5245]
gi|376377142|gb|EHS89914.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5243]
Length = 210
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IQWAVESDIPVLVLLTKADKL--ASGARKAQINMVREAVIAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|284009009|emb|CBA75939.1| probable GTP-binding protein [Arsenophonus nasoniae]
Length = 208
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++ +F +A P EIAFAGRSN GKSS LNALT+Q + RTS PG TQ IN
Sbjct: 10 HQTKFVTSAPDIHHLPNDHGIEIAFAGRSNAGKSSALNALTQQKNLARTSKTPGRTQLIN 69
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E VK W++ + EY+ R LK + +L+D + +K D
Sbjct: 70 LFEVAEGIRLVDLPGYGYAEVPESVKRQWQQALSEYLQKRKCLKGLIILMDIRHPLKDMD 129
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++I ++LTK D + P + + + LK +Q V SS G
Sbjct: 130 IQMIEWSVAMNIPILILLTKADKLVPNKRKTQLIAVHNKLKTVAGNIQ-VETFSSLKKMG 188
Query: 182 IRSLRTVLSK 191
I L+ L +
Sbjct: 189 IDKLQLKLDE 198
>gi|421724507|ref|ZP_16163725.1| GTP-binding protein YsxC [Klebsiella oxytoca M5al]
gi|423126575|ref|ZP_17114254.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5250]
gi|376396831|gb|EHT09468.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5250]
gi|410374732|gb|EKP29395.1| GTP-binding protein YsxC [Klebsiella oxytoca M5al]
Length = 210
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IQWAVESDIPVLVLLTKADKL--ASGARKAQIAMVREAVTAFNGDVQ-VEGFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|347537382|ref|YP_004844807.1| GTP-binding protein EngB [Flavobacterium branchiophilum FL-15]
gi|345530540|emb|CCB70570.1| Probable GTP-binding protein EngB [Flavobacterium branchiophilum
FL-15]
Length = 204
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + S PA LPE AF GRSNVGKSS++N LT + +TS KPG TQ IN FK
Sbjct: 7 EFIISNSDVSKCPAEFLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGKPGKTQLINHFK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A ++ K +++ + +Y R L +LID + + D E
Sbjct: 67 INNNWFLVDLPGYGYARVSKKTKSVFQQFITDYFEKRQQLVCAFVLIDIRLEAQNIDIEF 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+S M S+ + ++ TK D + + ++++ NN P ++S A +
Sbjct: 127 MSYMGESEIPFCIIFTKADKLSKTKIDSNIAAYKKAMIKNNWTEMPQHFITSSLDATGK- 185
Query: 185 LRTVLSKI 192
TVL+ I
Sbjct: 186 -ETVLNYI 192
>gi|18310371|ref|NP_562305.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens str. 13]
gi|110800363|ref|YP_696084.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens ATCC 13124]
gi|168207810|ref|ZP_02633815.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|168215329|ref|ZP_02640954.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
gi|168217820|ref|ZP_02643445.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|169342290|ref|ZP_02863368.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
gi|422346055|ref|ZP_16426969.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens WAL-14572]
gi|422874313|ref|ZP_16920798.1| GTP-binding protein YsxC [Clostridium perfringens F262]
gi|24418379|sp|Q8XKK5.1|ENGB_CLOPE RecName: Full=Probable GTP-binding protein EngB
gi|119369185|sp|Q0TQK6.1|ENGB_CLOP1 RecName: Full=Probable GTP-binding protein EngB
gi|18145051|dbj|BAB81095.1| probable GTP binding protein [Clostridium perfringens str. 13]
gi|110675010|gb|ABG83997.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens ATCC 13124]
gi|169299617|gb|EDS81676.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
gi|170660856|gb|EDT13539.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|170713286|gb|EDT25468.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
gi|182380168|gb|EDT77647.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|373226677|gb|EHP48999.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens WAL-14572]
gi|380304790|gb|EIA17076.1| GTP-binding protein YsxC [Clostridium perfringens F262]
Length = 197
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 91/157 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P +LPEIAF GRSNVGKSS++N+LT + G+ + S PG T+ INFF
Sbjct: 7 EFIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVDLPGYG+A ++ K +W ++ Y+ R LK+V LL+D + D ++
Sbjct: 67 LNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTADDVQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++ + V+ TK+D + + + I+E+L
Sbjct: 127 YEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETL 163
>gi|182627119|ref|ZP_02954837.1| hypothetical protein CJD_0168 [Clostridium perfringens D str.
JGS1721]
gi|177907508|gb|EDT70166.1| hypothetical protein CJD_0168 [Clostridium perfringens D str.
JGS1721]
Length = 197
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 91/157 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P +LPEIAF GRSNVGKSS++N+LT + G+ + S PG T+ INFF
Sbjct: 7 EFIISAVKREQYPDNNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVDLPGYG+A ++ K +W ++ Y+ R LK+V LL+D + D ++
Sbjct: 67 LNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTADDVQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++ + V+ TK+D + + + I+E+L
Sbjct: 127 YEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETL 163
>gi|421846758|ref|ZP_16279903.1| GTP-binding protein YsxC [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411771850|gb|EKS55505.1| GTP-binding protein YsxC [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 210
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 ILWAVESNVQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKLGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|387819497|ref|YP_005679844.1| GTP-binding protein EngB [Clostridium botulinum H04402 065]
gi|322807541|emb|CBZ05116.1| GTP-binding protein EngB [Clostridium botulinum H04402 065]
Length = 199
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A + +P PE+AF GRSNVGKS+++N LT + +V+ S PG T+ I
Sbjct: 10 IKKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLI 69
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + + VDLPGYG+A ++ K+ W ++++Y+ R LK++ LL+D++
Sbjct: 70 NFFVINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSD 129
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + VV TK D + D+ + I ++LK + ++++SS S
Sbjct: 130 DINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKMDKD--DKILLISSLSKE 187
Query: 181 G 181
G
Sbjct: 188 G 188
>gi|168335351|ref|ZP_02693446.1| GTPase EngB [Epulopiscium sp. 'N.t. morphotype B']
Length = 196
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E A FP + EIAFAG+SNVGKSS++N L + + RTS PG TQTI
Sbjct: 3 ITKSELIITAGNKKQFPDNNQIEIAFAGKSNVGKSSLINVLINRKALARTSSTPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + K VDLPGYG+A + ++++W + +++Y+ R SLK+V LLID +
Sbjct: 63 NFYNIQDKFNFVDLPGYGYAKVSKTLRESWGKFIEDYLGKRSSLKQVVLLIDIRHAPSEN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
D + + + VV TK D + +A+ I+ L+
Sbjct: 123 DKLMYNWISFFHDNVLVVATKVDKIKRSQIAKHISIIKSVLQ 164
>gi|148381176|ref|YP_001255717.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. ATCC 3502]
gi|153931772|ref|YP_001385551.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. ATCC 19397]
gi|153935229|ref|YP_001388957.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. Hall]
gi|153938105|ref|YP_001392578.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
F str. Langeland]
gi|168179123|ref|ZP_02613787.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|170757263|ref|YP_001782866.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
B1 str. Okra]
gi|226950655|ref|YP_002805746.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A2 str. Kyoto]
gi|384463546|ref|YP_005676141.1| GTP-binding protein [Clostridium botulinum F str. 230613]
gi|421839007|ref|ZP_16272694.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001627]
gi|148290660|emb|CAL84789.1| probable GTP-binding protein Engb [Clostridium botulinum A str.
ATCC 3502]
gi|152927816|gb|ABS33316.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152931143|gb|ABS36642.1| GTP-binding protein [Clostridium botulinum A str. Hall]
gi|152934001|gb|ABS39499.1| GTP-binding protein [Clostridium botulinum F str. Langeland]
gi|169122475|gb|ACA46311.1| GTP-binding protein [Clostridium botulinum B1 str. Okra]
gi|182669944|gb|EDT81920.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|226842026|gb|ACO84692.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A2 str. Kyoto]
gi|295320563|gb|ADG00941.1| GTP-binding protein [Clostridium botulinum F str. 230613]
gi|409736332|gb|EKN37764.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001627]
Length = 194
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A + +P PE+AF GRSNVGKS+++N LT + +V+ S PG T+ I
Sbjct: 5 IKKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLI 64
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + + VDLPGYG+A ++ K+ W ++++Y+ R LK++ LL+D++
Sbjct: 65 NFFVINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSD 124
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + VV TK D + D+ + I ++LK + ++++SS S
Sbjct: 125 DINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKMDKD--DKILLISSLSKE 182
Query: 181 G 181
G
Sbjct: 183 G 183
>gi|455641164|gb|EMF20361.1| GTP-binding protein YsxC [Citrobacter freundii GTC 09479]
Length = 210
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 ILWAVESNVQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKLGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|237727973|ref|ZP_04558454.1| GTPase EngB [Citrobacter sp. 30_2]
gi|226910230|gb|EEH96148.1| GTPase EngB [Citrobacter sp. 30_2]
Length = 210
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 ILWAVESNVQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKLGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|78189773|ref|YP_380111.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
chlorochromatii CaD3]
gi|119368800|sp|Q3APK7.1|ENGB_CHLCH RecName: Full=Probable GTP-binding protein EngB
gi|78171972|gb|ABB29068.1| GTP-binding protein [Chlorobium chlorochromatii CaD3]
Length = 194
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 82/138 (59%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A+ + P LPEI FAGRSNVGKSS+LN+LT G+ +TS KPG T+ IN+F +
Sbjct: 8 FVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTRQINYFLI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
VDLPGYG+A + K AW +L+ Y+ R ++ V +L+D++ D ++
Sbjct: 68 NELFYFVDLPGYGYAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHPFMENDVAML 127
Query: 126 SLMERSQTKYQVVLTKTD 143
+E Y +V+TK+D
Sbjct: 128 EFLEFHGRPYGIVMTKSD 145
>gi|298705654|emb|CBJ28902.1| YihA3, YihA/EngB-like GTPase [Ectocarpus siliculosus]
Length = 420
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 21 LPEIAFAGRSNVGKSSMLNALTR---QWGVVRTSDKPGLTQTINFFKLGTK---LCLVDL 74
LPE+A AG +N GKS+++NAL+ + G TSD+ G T + F+++G K L +VDL
Sbjct: 198 LPEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLVGFYQVGKKPPVLTMVDL 257
Query: 75 PGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
PGYG A A W ++KEY++TR L R C+L+D G D L+ L+ +
Sbjct: 258 PGYGHAVATRHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRALLQLLAKRNIP 317
Query: 135 YQVVLTKTDTVFP----IDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLS 190
YQ+VLTK D + P V + + P V SGAG+ +L L+
Sbjct: 318 YQIVLTKADLLTPELLSACVLLLRRDLSDLCGQEAGSTAPFSAVCGTSGAGVTTLWKDLA 377
Query: 191 KIA 193
K A
Sbjct: 378 KQA 380
>gi|312882609|ref|ZP_07742348.1| putative GTP-binding protein EngB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369694|gb|EFP97207.1| putative GTP-binding protein EngB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 219
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + E+AFAGRSN GKSS LN LT Q G+ +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRGLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VIDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + ++I++ + V V SS G G+ +
Sbjct: 131 IFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAEGFGGDVS-VAAFSSLKGIGVDT 189
Query: 185 LRTVLS 190
LR+ L
Sbjct: 190 LRSKLD 195
>gi|162455894|ref|YP_001618261.1| GTP-binding protein [Sorangium cellulosum So ce56]
gi|161166476|emb|CAN97781.1| predicted GTP-binding protein [Sorangium cellulosum So ce56]
Length = 324
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 86/150 (57%), Gaps = 10/150 (6%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A A +S P P E+AFAGRSNVGKSS++N L + G+VRTS PG T+ IN ++
Sbjct: 101 FVAGAGSLASLPPPVSAEVAFAGRSNVGKSSLINTLVERKGLVRTSSNPGSTRQINLYEA 160
Query: 66 ----GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
G LVDLPGYGF + + AW L++ Y+ RV+L V LL+D + G++ D
Sbjct: 161 RARDGAVFQLVDLPGYGFTRRSKSEQAAWASLIEGYLRGRVTLAAVLLLVDARRGLEEDD 220
Query: 122 HELISLME------RSQTKYQVVLTKTDTV 145
ELI +E R + +V TK D V
Sbjct: 221 LELIRFIEASRDVARRPVELLLVATKVDKV 250
>gi|395230168|ref|ZP_10408474.1| GTPase EngB [Citrobacter sp. A1]
gi|424730868|ref|ZP_18159460.1| ribosome biogenesis gtp-binding protein [Citrobacter sp. L17]
gi|394716098|gb|EJF21867.1| GTPase EngB [Citrobacter sp. A1]
gi|422894581|gb|EKU34390.1| ribosome biogenesis gtp-binding protein [Citrobacter sp. L17]
Length = 210
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDAGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 ILWAVESNVQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKLGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|347753004|ref|YP_004860569.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus coagulans
36D1]
gi|347585522|gb|AEP01789.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus coagulans
36D1]
Length = 194
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A +P LPEIA AGRSNVGKSS +N + + + RTS KPG TQT+NF+K
Sbjct: 7 ELVISAVRQEQYPEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYGFA ++ ++ W +++ Y+++R LK V L++D + D +
Sbjct: 67 IENKLYFVDVPGYGFAKVSKKEREKWGRMIETYMTSRKQLKTVVLIVDVRHPPTNDDCLM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ ++ + VV TK D + A +E+L N +++ SS++G G
Sbjct: 127 YNFLKYYKIPCIVVATKADKIPKGKWASHLKTAKETL--NLEKEDEIILFSSETGEG 181
>gi|110802133|ref|YP_698700.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens SM101]
gi|119369186|sp|Q0ST57.1|ENGB_CLOPS RecName: Full=Probable GTP-binding protein EngB
gi|110682634|gb|ABG86004.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens SM101]
Length = 197
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 91/157 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P +LPEIAF GRSNVGKSS++N+LT + G+ + S PG T+ INFF
Sbjct: 7 EFIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
L LVDLPGYG+A ++ K +W ++ Y+ R LK+V LL+D + D ++
Sbjct: 67 LNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTADDVQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++ + V+ TK+D + + + I+E+L
Sbjct: 127 YEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETL 163
>gi|397905709|ref|ZP_10506551.1| GTP-binding protein EngB [Caloramator australicus RC3]
gi|397161228|emb|CCJ33886.1| GTP-binding protein EngB [Caloramator australicus RC3]
Length = 193
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E A +P PEIA AGRSNVGKSS++N L + RTS PG T+TI
Sbjct: 3 IKKAELEKVAVFPYQYPNTGRPEIALAGRSNVGKSSLINTLVNIKSLARTSSSPGKTRTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + LVDLPGYG+A +E K W +++++Y++ R LK + LL+D++
Sbjct: 63 NFFNINDSFYLVDLPGYGYAKVSKEEKKKWGKMIEDYLNGREELKLIALLVDSRHAPTED 122
Query: 121 DHELISLMERSQTKYQVVLTKTDT------VFPIDVARRAMQI 157
D +++ + S K V+ TK D + I++ +R +Q+
Sbjct: 123 DKLMLNFIRHSGKKLVVIATKIDKLSRSELIKNINMLKRELQL 165
>gi|56964398|ref|YP_176129.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus clausii
KSM-K16]
gi|81822069|sp|Q5WEP2.1|ENGB_BACSK RecName: Full=Probable GTP-binding protein EngB
gi|56910641|dbj|BAD65168.1| GTP-binding protein [Bacillus clausii KSM-K16]
Length = 197
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 3/193 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E A + +P LPE+A AGRSNVGKSS +N + + G+ RTS +PG TQT+
Sbjct: 3 VTKAELAHVAVKAEQYPKNQLPELALAGRSNVGKSSFINKMLNRKGLARTSGQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+++ +L VD+PGYG+A + + AW ++++ Y+S R LK V L+D +
Sbjct: 63 NFYEINERLYFVDVPGYGYAKVSKTERAAWGKMIETYLSEREELKAVLQLVDIRHRPSED 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + M+ +V TK D + ++ I ++L S P++ SS +G
Sbjct: 123 DQLMYNWMKHYGIPVILVATKADKIPKGKWQKQLTAIAKTLDKEAS--DPLLFFSSATGL 180
Query: 181 G-IRSLRTVLSKI 192
G + RT+L+ +
Sbjct: 181 GKDEAWRTILNHL 193
>gi|374621147|ref|ZP_09693681.1| cell division checkpoint GTPase YihA [gamma proteobacterium HIMB55]
gi|374304374|gb|EHQ58558.1| cell division checkpoint GTPase YihA [gamma proteobacterium HIMB55]
Length = 201
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYA 82
E+AFAGRSN GKSS +NALT + RTS PG TQ INFF + ++ LVDLPGYGFA
Sbjct: 11 EVAFAGRSNAGKSSAINALTGNSKLARTSRTPGRTQLINFFSVADQIRLVDLPGYGFAKV 70
Query: 83 KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKT 142
+VK+ W + ++ Y+ R SLK + LL+D + +K D ++I S+ V+LTK+
Sbjct: 71 PLKVKEEWNKQLERYLQYRESLKGLILLMDIRHPLKDYDRQMIEWATISEMPVHVLLTKS 130
Query: 143 DTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLS 190
D + + +++ LK + + V + SS + G+ L+ L+
Sbjct: 131 DKLKRGPAKNALLAVKKELKEHERWIS-VQLFSSHNHDGMDELQRTLN 177
>gi|444353935|ref|YP_007390079.1| GTP-binding protein EngB [Enterobacter aerogenes EA1509E]
gi|443904765|emb|CCG32539.1| GTP-binding protein EngB [Enterobacter aerogenes EA1509E]
Length = 210
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W++ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQKALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N +Q V SS +G+
Sbjct: 130 IEWAVESDIQVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDIQ-VEPFSSLKKSGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|342216045|ref|ZP_08708692.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 375 str. F0436]
gi|341586935|gb|EGS30335.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 375 str. F0436]
Length = 199
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
+P DL EIAFAGRSNVGKSS +NALT++ + TS KPG T+TINF+++ LVDLP
Sbjct: 18 YPKTDLKEIAFAGRSNVGKSSFINALTQRKKLAYTSSKPGKTRTINFYRIDNCFRLVDLP 77
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A + ++D W ++++ Y++ R ++ + LL+D++ +D E+ + +
Sbjct: 78 GYGYAKVSKAMRDDWAQMIEGYLANRSNIIEIILLVDSRIEPTSQDREMYQWIVDNGFSG 137
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARF 195
V+ TK D + + R+ +I SL Q ++ S++ I+ +L + F
Sbjct: 138 IVIATKADKLSKNQLNRQLKKIHTSLGCPEE--QEILPFSTEDQDLIQETGEILEDLLAF 195
Query: 196 AKV 198
V
Sbjct: 196 YGV 198
>gi|365101196|ref|ZP_09331903.1| ribosome biogenesis GTP-binding protein YsxC [Citrobacter freundii
4_7_47CFAA]
gi|363647643|gb|EHL86857.1| ribosome biogenesis GTP-binding protein YsxC [Citrobacter freundii
4_7_47CFAA]
Length = 210
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 ILWAVESNVQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VDAFSSLKKLGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|336114567|ref|YP_004569334.1| small GTP-binding protein [Bacillus coagulans 2-6]
gi|335367997|gb|AEH53948.1| small GTP-binding protein [Bacillus coagulans 2-6]
Length = 194
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A +P LPEIA AGRSNVGKSS +N + + + RTS KPG TQT+NF+K
Sbjct: 7 ELVISAVRQEQYPEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQTLNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYGFA ++ ++ W ++++ Y+++R LK V L++D + D +
Sbjct: 67 IENKMYFVDVPGYGFAKVSKKEREKWGQMIEAYMTSRKQLKTVVLIVDVRHPPTNDDCLM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ ++ + VV TK D + A +E+L N +++ SS++G G
Sbjct: 127 YNFLKYYKIPCIVVATKADKIPKGKWASHLKTAKETL--NLEKEDEIILFSSETGEG 181
>gi|422876520|ref|ZP_16922990.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1056]
gi|332361328|gb|EGJ39132.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1056]
Length = 195
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +LK V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVILVATKADKI 149
>gi|387770409|ref|ZP_10126589.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella bettyae
CCUG 2042]
gi|386904220|gb|EIJ69016.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella bettyae
CCUG 2042]
Length = 205
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 1/189 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A + P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFMTSAAKINQLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++ + EY+ R L+ V +L+D + +K D
Sbjct: 69 LFEVEPQCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLQGVVILMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++I S ++LTK+D + + +++ + E++ VQ V S+++ G
Sbjct: 129 QQMIEWSVSSNLPILLLLTKSDKLSQSERSKQVKMVREAILPFQGDVQ-VEAFSAQNKLG 187
Query: 182 IRSLRTVLS 190
I L + L+
Sbjct: 188 IDKLSSKLN 196
>gi|292493379|ref|YP_003528818.1| GTP-binding protein HSR1-like protein [Nitrosococcus halophilus
Nc4]
gi|291581974|gb|ADE16431.1| GTP-binding protein HSR1-related protein [Nitrosococcus halophilus
Nc4]
Length = 205
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K + +A S P E+AFAGRSNVGKSS +NA+T G+ RTS PG TQ IN
Sbjct: 8 HKAHYQGSAYTLSQLPPDRGMEVAFAGRSNVGKSSAINAITNIKGLARTSKTPGRTQMIN 67
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L + CLVDLPGYG+A E VK W + + Y+ R SL + L++D + +P D
Sbjct: 68 FFQLDARRCLVDLPGYGYAKVPEAVKRQWRQTLSNYLEWRQSLCGIVLVMDIRRLFQPFD 127
Query: 122 HELISLMERSQTKYQVVLTKTDTV 145
+++ ++LTK+D +
Sbjct: 128 LQMLEWCRARGLPVCILLTKSDKL 151
>gi|119475280|ref|ZP_01615633.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143]
gi|119451483|gb|EAW32716.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143]
Length = 202
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A + P+ D E+AFAGRSN GKSS +N LT + RTS PG TQ +NFF
Sbjct: 12 EFRTSAAKLADCPSDDGCEVAFAGRSNAGKSSAINTLTDNKRMARTSKTPGRTQLLNFFD 71
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+G + LVDLPGYGFA VK+ W+ + EY+ R SL + LL+D + ++ D +
Sbjct: 72 VGERQRLVDLPGYGFAKVPLAVKEKWQRHLGEYLRERESLAGLVLLMDCRHPLQEFDRMM 131
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ E + ++LTK D + +++ E LK LV + + S+ G+
Sbjct: 132 LAWAEGCEMPVHILLTKADKLKKGPANSVLLKVREELK-QQELVS-IQLFSALKRTGLDQ 189
Query: 185 LRTVLSKIARF 195
LR L RF
Sbjct: 190 LREKLQIWLRF 200
>gi|15606865|ref|NP_214245.1| hypothetical protein aq_1815 [Aquifex aeolicus VF5]
gi|6226469|sp|O67679.1|ENGB_AQUAE RecName: Full=Probable GTP-binding protein EngB
gi|2984110|gb|AAC07648.1| hypothetical protein aq_1815 [Aquifex aeolicus VF5]
Length = 183
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
FP PD PE+ F GRSNVGKSS+LN + V + S PG T+ +N+F L KL LVD+P
Sbjct: 13 FPPPDYPEVVFVGRSNVGKSSLLNMVVGS-KVAKVSKTPGRTRAVNYFLLDKKLYLVDVP 71
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRV-SLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
GYG+A E + W ++++ Y R ++K LLID GV+P D ++I E
Sbjct: 72 GYGYAKVGREEMEKWRKMMERYFKERKDNIKMAFLLIDAVAGVQPLDEQMIEWFEYYGIP 131
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
+ VV+TK D ++A+ Q++ + + ++V + S+K G G + L LS+I
Sbjct: 132 FTVVITKIDKASQSEIAKTLKQVKRYV-GDGAIV----LSSAKEGKGKKEL---LSRI 181
>gi|258626623|ref|ZP_05721453.1| GTP-binding protein [Vibrio mimicus VM603]
gi|258581127|gb|EEW06046.1| GTP-binding protein [Vibrio mimicus VM603]
Length = 219
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VAEGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKQFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDQ 196
>gi|170289148|ref|YP_001739386.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga sp. RQ2]
gi|403253600|ref|ZP_10919901.1| GTP-binding protein YsxC [Thermotoga sp. EMP]
gi|238688853|sp|B1LBK5.1|ENGB_THESQ RecName: Full=Probable GTP-binding protein EngB
gi|170176651|gb|ACB09703.1| small GTP-binding protein [Thermotoga sp. RQ2]
gi|402811134|gb|EJX25622.1| GTP-binding protein YsxC [Thermotoga sp. EMP]
Length = 195
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 5/192 (2%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+E A+ +P P E+AF GRSNVGKSS+LNAL + V S PG T++INF+
Sbjct: 6 VELVKIARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNR-KVAFVSKTPGKTRSINFY 64
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ +K VDLPGYG+A ++ + W+ LV++Y R SL+ V LL+D + + D
Sbjct: 65 LVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDFM 124
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-PVMMVSSKSGAGI 182
+I M+ + +VLTK D V ++ RA ++EE K + + ++ SS +G GI
Sbjct: 125 MIEWMKSLNIPFTIVLTKMDKV---KMSERAKKLEEHRKVFSRYGEYTIIPTSSVTGEGI 181
Query: 183 RSLRTVLSKIAR 194
L ++S + +
Sbjct: 182 SELLDLISTLLK 193
>gi|116751466|ref|YP_848153.1| HSR1-related GTP-binding protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700530|gb|ABK19718.1| GTP-binding protein, HSR1-related [Syntrophobacter fumaroxidans
MPOB]
Length = 198
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 83/141 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF AA S +P LPE+AFAGRSNVGKSS++N L ++ +VRTS PG TQTINFF
Sbjct: 11 EFKTAAVRSGQYPDDHLPEVAFAGRSNVGKSSLINCLLQRRKLVRTSRTPGQTQTINFFL 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ VDLPGYGFA V+ W +V+ Y+ R +L+ V ++D + P D +L
Sbjct: 71 INGLFYCVDLPGYGFARVPMAVRAQWGPMVESYLGGRPNLRGVVQILDARHPPSPDDLKL 130
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
+ + + VLTK D V
Sbjct: 131 WNWLIDRKIPAVPVLTKADKV 151
>gi|419858065|ref|ZP_14380745.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421193043|ref|ZP_15650294.1| GTPase [Oenococcus oeni AWRIB553]
gi|399973025|gb|EJO07211.1| GTPase [Oenococcus oeni AWRIB553]
gi|410499321|gb|EKP90755.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 198
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 90/151 (59%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
+PA +L EIAF GRSNVGKSS++N L + G+ S +PG TQT+NF+ L KL VD+P
Sbjct: 18 YPAGNLSEIAFVGRSNVGKSSLINTLIERNGLAHISGQPGKTQTLNFYNLDEKLFFVDVP 77
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A + ++ + +V+EY+S+R LK V LID + D + + +E Q
Sbjct: 78 GYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDARHEPTEDDKLMYNWLEYYQVPI 137
Query: 136 QVVLTKTDTVFPIDVARRAMQIEESLKANNS 166
+V TK D V QI+++LK N++
Sbjct: 138 LIVATKADKVASGKFNAVESQIKKTLKFNST 168
>gi|192361932|ref|YP_001983930.1| putative GTPase [Cellvibrio japonicus Ueda107]
gi|190688097|gb|ACE85775.1| putative GTPase, involved in coordination of cell cycle (EngB)
[Cellvibrio japonicus Ueda107]
Length = 219
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 9/193 (4%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K F +A P E+AFAGRSN GKSS +NALT + RTS PG TQ INF
Sbjct: 9 KARFLTSAPSIRQCPPETGREVAFAGRSNAGKSSAINALTNNHRLARTSKTPGRTQLINF 68
Query: 63 FKLGTKLC-LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F LG + LVDLPGYG+A E+K+ W+ + EY+ R +L+ + LL+D + ++ D
Sbjct: 69 FTLGDEAYRLVDLPGYGYAKVSRELKEQWQRDLSEYLERRKTLQGLVLLMDIRHPLQEFD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK----ANNSL-VQPVMMVSS 176
++ + Q ++LTK D + V ++ + LK +N L +QP S+
Sbjct: 129 SAILHWAMQGQMPVHILLTKADKLSRSQVNNTLFKVHKELKNLGLHDNKLSLQP---FSA 185
Query: 177 KSGAGIRSLRTVL 189
S +G+ L++VL
Sbjct: 186 LSNSGVDELKSVL 198
>gi|365959845|ref|YP_004941412.1| GTP-binding protein YsxC [Flavobacterium columnare ATCC 49512]
gi|365736526|gb|AEW85619.1| GTP-binding protein YsxC [Flavobacterium columnare ATCC 49512]
Length = 208
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + + S P LPE AF GRSNVGKSS++N LT + +TS KPG TQ I
Sbjct: 3 INTAEFIISNSIVSKCPQERLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSSKPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A ++ K+ +++ + +Y R L +LID + +
Sbjct: 63 NHFKINNNWFLVDLPGYGYAKVSKKTKEIFQKFITDYFEKREQLVCAFVLIDIRHEAQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
D E I+ + + ++ TK D + + ++L ANN P ++S
Sbjct: 123 DLEFITYLGEIGIPFCIIFTKADKISKGKTEQNVAAYRKALLANNWEEMPQHFITS 178
>gi|219110105|ref|XP_002176804.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411339|gb|EEC51267.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 390
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 117/236 (49%), Gaps = 66/236 (27%)
Query: 10 AKVSSSFPA--PDLPEIAFAGRSNVGKSSMLNAL----TRQWGVVR-------------- 49
A + +PA ++PEI AGRSNVGKS++LNAL VVR
Sbjct: 108 ATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQP 167
Query: 50 ------TSDKPGLTQTINFFKLGTKL------------CLVDLPGYGFAYAKEEVKDAWE 91
TSDKPG T+ I F++L +L LVDLPGYGFAYAKEE +
Sbjct: 168 KGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYR 227
Query: 92 ELVKEYVSTRVS--LKRVCLLIDTKWGVKPRDHE-LISLMERSQT--------------- 133
L+ +Y+ R + LKRV LLID + G+K D + L+ L E S+
Sbjct: 228 ALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNA 287
Query: 134 ---KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-----PVMMVSSKSGAG 181
Q+VLTK D V D+ARR Q+ L ++ ++ PVM+VS+++G G
Sbjct: 288 QLPPIQLVLTKCDLVTRADLARRVAQVRSQL--SDCFIREPSQLPVMLVSARAGVG 341
>gi|326802551|ref|YP_004320370.1| GTP-binding protein engB [Sphingobacterium sp. 21]
gi|326553315|gb|ADZ81700.1| GTP-binding protein engB [Sphingobacterium sp. 21]
Length = 206
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 101/190 (53%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + P P +PE AF GRSNVGKSS++NALT+ G+ +TS PG TQ IN F
Sbjct: 13 EFVCSNTRIDKLPPPTIPEYAFIGRSNVGKSSLINALTQHKGLAKTSQTPGKTQLINHFL 72
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A + + WE+ +K+Y+ R +L+ V +LID++ + D +
Sbjct: 73 VNKEWFLVDLPGYGYAKTSKTNRSEWEKFIKKYLFNRENLQCVFVLIDSRLTPQKNDLDF 132
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
L+ + ++ TK D I ++L V P ++ SS++ G
Sbjct: 133 CCLLGEKGIPFILIFTKADKQSKIKSEHNIELFRKALLTWFEEVPPHILTSSETRNGCDE 192
Query: 185 LRTVLSKIAR 194
+ ++ ++ +
Sbjct: 193 VLGLIDEVNQ 202
>gi|449145764|ref|ZP_21776563.1| GTP-binding protein YsxC [Vibrio mimicus CAIM 602]
gi|449078549|gb|EMB49484.1| GTP-binding protein YsxC [Vibrio mimicus CAIM 602]
Length = 219
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VAEGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKQFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDQ 196
>gi|410629494|ref|ZP_11340194.1| GTP-binding protein [Glaciecola arctica BSs20135]
gi|410150979|dbj|GAC17061.1| GTP-binding protein [Glaciecola arctica BSs20135]
Length = 202
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 4 LEFFAAAKVSSSFP-----APDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLT 57
+ ++ AK S S P PD EIAFAGRSN GKSS LN LTRQ G+ RTS PG T
Sbjct: 1 MSHYSQAKFSISAPDITHLGPDEGIEIAFAGRSNAGKSSALNKLTRQKGLARTSKTPGRT 60
Query: 58 QTINFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGV 117
Q IN F+L L+DLPGYG+A +K W+ + EY+ R S+K + +L+D +
Sbjct: 61 QLINVFQLDENRRLIDLPGYGYAKVPIAIKKKWQRSLGEYLQKRESIKGLVVLMDIRHPF 120
Query: 118 KPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSK 177
K D ELI + +LTK D + + + M + E+ A V V + SS
Sbjct: 121 KDLDQELIHWAVAADLPVLALLTKADKLKSSNRKNQLMMVREAALAFCGDV-TVDVFSSL 179
Query: 178 SGAGIRSLRTVL 189
SG G+ +L L
Sbjct: 180 SGIGLENLEQKL 191
>gi|237807113|ref|YP_002891553.1| ribosome biogenesis GTP-binding protein YsxC [Tolumonas auensis DSM
9187]
gi|259645909|sp|C4L968.1|ENGB_TOLAT RecName: Full=Probable GTP-binding protein EngB
gi|237499374|gb|ACQ91967.1| GTP-binding protein HSR1-related [Tolumonas auensis DSM 9187]
Length = 212
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K+ F +A P EIAFAGRSN GKSS LNALT+Q + RTS PG TQ IN
Sbjct: 10 KVHFVTSAPDIRHLPNDGGIEIAFAGRSNAGKSSALNALTQQRQLARTSKTPGRTQLINL 69
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F+L LVDLPGYG+A E+K W+ + EY+ R SLK + LL+D + +K D
Sbjct: 70 FELEPGKRLVDLPGYGYAQVPIEMKLKWQAALSEYLQKRESLKALVLLMDIRHPLKDLDL 129
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+++ S V+LTK D + P Q+ ++ V+ V SS G G+
Sbjct: 130 QMLEWASNSDLNILVLLTKADKLNPGPRKTVVQQVRKATMVFGDSVR-VEAFSSLKGTGV 188
Query: 183 RSLRTVLS 190
+ +LS
Sbjct: 189 DEVTRILS 196
>gi|170769691|ref|ZP_02904144.1| putative GTP-binding protein EngB [Escherichia albertii TW07627]
gi|170121499|gb|EDS90430.1| putative GTP-binding protein EngB [Escherichia albertii TW07627]
Length = 210
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 5/190 (2%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
++ F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN
Sbjct: 8 QMHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F++ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGA 180
++I S V+LTK D + AR+A + E++ A N VQ V SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQ 184
Query: 181 GIRSLRTVLS 190
G+ LR L
Sbjct: 185 GVDKLRQKLD 194
>gi|424826853|ref|ZP_18251704.1| GTP-binding protein YsxC [Clostridium sporogenes PA 3679]
gi|365980554|gb|EHN16580.1| GTP-binding protein YsxC [Clostridium sporogenes PA 3679]
Length = 194
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A + +P PEIAF GRSNVGKS+++N LT + +V+ S PG T+ I
Sbjct: 5 IKKAEFVISAVKKAQYPGDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLI 64
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + + VDLPGYG+A ++ K+ W ++++Y+ R LK++ LL+D++
Sbjct: 65 NFFLINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTGD 124
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + VV TK D + D+ + I ++LK + ++++SS +
Sbjct: 125 DINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKMDKD--DKILLISSLNKE 182
Query: 181 G 181
G
Sbjct: 183 G 183
>gi|389578832|ref|ZP_10168859.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfobacter
postgatei 2ac9]
gi|389400467|gb|EIM62689.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfobacter
postgatei 2ac9]
Length = 199
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 105/178 (58%), Gaps = 3/178 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF +A + +P D PEIAFAGRSNVGKSS++N L + +V+TS +PG TQ INFF
Sbjct: 6 VEFIKSAVKPAQYPEYDFPEIAFAGRSNVGKSSLINTLINRKDMVKTSSRPGCTQLINFF 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ L LVDLPGYG+A ++++ W+ +V+ Y+ TR +L + LLID + + E
Sbjct: 66 LINDGLSLVDLPGYGYAKVSKKIRAQWQPMVETYMGTRKNLLGLILLIDIRRDPGKEELE 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ +E Q +VLTK D + ++ Q + + A N +++ S+K+ G
Sbjct: 126 MVRWLETKQIPCLLVLTKADK---LSKTKQLKQFDAACTAFNRDRNGIVLFSAKTRQG 180
>gi|160902807|ref|YP_001568388.1| ribosome biogenesis GTP-binding protein YsxC [Petrotoga mobilis
SJ95]
gi|189037183|sp|A9BHV0.1|ENGB_PETMO RecName: Full=Probable GTP-binding protein EngB
gi|160360451|gb|ABX32065.1| small GTP-binding protein [Petrotoga mobilis SJ95]
Length = 196
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 3/176 (1%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
P PD EIAFAGRSNVGKSS LNA+ + + S PG T++IN++ + K VDLPG
Sbjct: 19 PPPDKKEIAFAGRSNVGKSSFLNAIL-GIKIAKVSSTPGKTRSINYYLVNDKYYFVDLPG 77
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YGFA ++ K+ W L+ EY TR SL V LLID + + D+ ++ ++ T +
Sbjct: 78 YGFASVSKQEKERWNVLMNEYFKTRFSLSAVSLLIDHRHMPQKLDYAMVEWLKDLGTPFL 137
Query: 137 VVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
+LTK+D + + A+ I+ S + M SSK+ G++ + + +I
Sbjct: 138 FILTKSDKLTKSEKAKLFEDIKRSFSTYGEYI--YMPFSSKTKEGLKEVLKTIGEI 191
>gi|258623133|ref|ZP_05718145.1| GTP-binding protein [Vibrio mimicus VM573]
gi|424810746|ref|ZP_18236087.1| hypothetical protein SX4_1321 [Vibrio mimicus SX-4]
gi|258584616|gb|EEW09353.1| GTP-binding protein [Vibrio mimicus VM573]
gi|342322118|gb|EGU17912.1| hypothetical protein SX4_1321 [Vibrio mimicus SX-4]
Length = 220
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VAEGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|148270457|ref|YP_001244917.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga petrophila
RKU-1]
gi|166232160|sp|A5IMB8.1|ENGB_THEP1 RecName: Full=Probable GTP-binding protein EngB
gi|147736001|gb|ABQ47341.1| small GTP-binding protein [Thermotoga petrophila RKU-1]
Length = 195
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 5/195 (2%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ +E A+ +P P E+AF GRSNVGKSS+LNAL + + S PG T++I
Sbjct: 3 IQDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNK-KIAFVSKTPGKTRSI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + +K VDLPGYG+A ++ + W+ LV++Y R SL+ V LL+D + +
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-PVMMVSSKSG 179
D +I M+ + +VLTK D V ++ RA ++EE K + + ++ SS +G
Sbjct: 122 DFMMIEWMKSLNIPFTIVLTKMDKV---KMSERAKKLEEHQKEFSRYGEYTIIPTSSVTG 178
Query: 180 AGIRSLRTVLSKIAR 194
GI L ++S + +
Sbjct: 179 EGISELLDLISTLLK 193
>gi|302874449|ref|YP_003843082.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
gi|307690944|ref|ZP_07633390.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
gi|302577306|gb|ADL51318.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
Length = 201
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 93/158 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +S +P D+PE+AF GRSNVGKSS++N LT + +V+ S PG T+ +NFF
Sbjct: 7 EFVTSAVKTSQYPQDDIPEVAFVGRSNVGKSSLINTLTNRKKLVKVSQTPGKTRLVNFFI 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + VDLPGYG+A + +D+W + ++ Y+ R LK+V LL+D++ D +
Sbjct: 67 INNVMHFVDLPGYGYAKVSKNERDSWGKTIETYLHNRPQLKKVILLLDSRRVPNEDDILM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ + +VLTK D + ++ + I E++K
Sbjct: 127 YDWILHYGYEAVIVLTKVDKLTKNELNKNQKIIAEAIK 164
>gi|307705962|ref|ZP_07642787.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307620472|gb|EFN99583.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 195
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +
Sbjct: 5 IHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLL 64
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D +
Sbjct: 65 NFFNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSAD 124
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D ++ ++ + +V TK D +
Sbjct: 125 DVQMYEFLKYYEIPVIIVATKADKI 149
>gi|295100722|emb|CBK98267.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Faecalibacterium
prausnitzii L2-6]
Length = 204
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK +F A+ +SS P D PE++F+GRSNVGKSS++N L + + R S PG T TIN
Sbjct: 4 NKADFIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTATIN 63
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+ + VDLPGYG+A ++ W++L+ Y + + LID + D
Sbjct: 64 FYAV-DDCYFVDLPGYGYAKVSNADRERWDDLINSYFEAQRHHTLLVQLIDCRHAPSADD 122
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+++ + + V LTK D + +A+ + E Q V++ S +SG G
Sbjct: 123 IQMLHYLHYHNIPFVVALTKADKLKKSQLAQTREEFETLCLPYG--CQKVVLTSGESGCG 180
Query: 182 IRSLRTVLS 190
I L+ VL+
Sbjct: 181 IPELQAVLN 189
>gi|187776854|ref|ZP_02993327.1| hypothetical protein CLOSPO_00393 [Clostridium sporogenes ATCC
15579]
gi|187775513|gb|EDU39315.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
sporogenes ATCC 15579]
Length = 199
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF +A + +P PEIAF GRSNVGKS+++N LT + +V+ S PG T+ INF
Sbjct: 12 KAEFVISAVKKAQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINF 71
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + + VDLPGYG+A ++ K+ W ++++Y+ R LK++ LL+D++ D
Sbjct: 72 FLINENMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSDDI 131
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ + ++ + VV TK D + D+ + I ++LK + ++++SS + G
Sbjct: 132 NMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKMDKD--DKILLISSLNKEG 188
>gi|28198564|ref|NP_778878.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
Temecula1]
gi|386084745|ref|YP_006001027.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|32129522|sp|Q87DM6.1|ENGB_XYLFT RecName: Full=Probable GTP-binding protein EngB
gi|28056648|gb|AAO28527.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|307579692|gb|ADN63661.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 203
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ +A P+ D E+AFAGRSN GKSS+LN LTRQ + R S PG TQ + +F
Sbjct: 9 KYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFT 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A +E++ W+ + Y R SL+ + +++D + +K D ++
Sbjct: 69 VTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ + Q +LTK D + A+ ++ L + + + SSKS G+
Sbjct: 129 LAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQ 188
Query: 185 LRTVL 189
L TV+
Sbjct: 189 LHTVI 193
>gi|431794976|ref|YP_007221881.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785202|gb|AGA70485.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 210
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 2/192 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A + +P PEIA AGRSNVGKSS++N + + RT + PG TQ I
Sbjct: 4 IRKAEFITSAVSVNGYPEGPEPEIALAGRSNVGKSSLINKFINRKNLARTGNTPGKTQMI 63
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+++ + VDLPGYG+A +E+K W ++++EY S R +L+ V ++D +
Sbjct: 64 NFYRINDEWGFVDLPGYGYAKVSKELKANWGKMMEEYFSRRGNLRAVIQVVDIRHIPSLE 123
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E+ + VV TK D + + QI ++L + + ++ S+++G
Sbjct: 124 DEEMHGFLRNRGLPVLVVATKADKISKGQWGKHLSQIAKALNIPDWRM--IIPYSAETGL 181
Query: 181 GIRSLRTVLSKI 192
G+ L L +I
Sbjct: 182 GVPELHQALEEI 193
>gi|429085851|ref|ZP_19148809.1| GTP-binding protein EngB [Cronobacter condimenti 1330]
gi|426544923|emb|CCJ74850.1| GTP-binding protein EngB [Cronobacter condimenti 1330]
Length = 211
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VTDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK+D + AR+A + E+ A N VQ V SS +G+
Sbjct: 130 IEWAVDSAIPVLVLLTKSDKL--ASGARKAQLNMVREAAIAFNGDVQ-VEAFSSLKKSGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRAKLD 194
>gi|213963255|ref|ZP_03391512.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
sputigena Capno]
gi|213954117|gb|EEB65442.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
sputigena Capno]
Length = 201
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 97/192 (50%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + S P +LPE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ LVDLPGYG+A +E K +++ + +Y R L +L+D + +
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + +V TK D + P+ + R ++ L P + S+++
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLVIERNIAAYQQVLLETWEEFPPYFVTSAENKT 181
Query: 181 GIRSLRTVLSKI 192
G L + +I
Sbjct: 182 GKEELTHYIEQI 193
>gi|170758960|ref|YP_001788547.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A3 str. Loch Maree]
gi|169405949|gb|ACA54360.1| GTP-binding protein [Clostridium botulinum A3 str. Loch Maree]
Length = 194
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A +P PE+AF GRSNVGKS+++N LT + +V+ S PG T+ I
Sbjct: 5 IKKAEFIISAVKKGQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLI 64
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + + VDLPGYG+A + K+ W ++++Y+ R LK++ LL+D++
Sbjct: 65 NFFVINDNMYFVDLPGYGYAKVSKREKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSD 124
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + ++ + VV TK D + D+ + I ++LK + ++++SS S
Sbjct: 125 DINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKMDKD--DKILLISSLSKE 182
Query: 181 G 181
G
Sbjct: 183 G 183
>gi|161486407|ref|NP_839017.2| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 2a
str. 2457T]
gi|384545466|ref|YP_005729530.1| putative GTP-binding protein engB [Shigella flexneri 2002017]
gi|415859080|ref|ZP_11533405.1| hypothetical protein SF2457T_4463 [Shigella flexneri 2a str. 2457T]
gi|417704312|ref|ZP_12353411.1| hypothetical protein SFK218_4644 [Shigella flexneri K-218]
gi|417709607|ref|ZP_12358625.1| hypothetical protein SFVA6_4456 [Shigella flexneri VA-6]
gi|417725186|ref|ZP_12373975.1| hypothetical protein SFK304_4498 [Shigella flexneri K-304]
gi|417730556|ref|ZP_12379241.1| hypothetical protein SFK671_4264 [Shigella flexneri K-671]
gi|417735520|ref|ZP_12384161.1| hypothetical protein SF274771_4128 [Shigella flexneri 2747-71]
gi|418259219|ref|ZP_12882221.1| cell division protein putative checkpoint GTPase [Shigella flexneri
6603-63]
gi|420333499|ref|ZP_14835137.1| putative GTP-binding protein EngB [Shigella flexneri K-1770]
gi|420343954|ref|ZP_14845417.1| putative GTP-binding protein EngB [Shigella flexneri K-404]
gi|420376421|ref|ZP_14876169.1| putative GTP-binding protein EngB [Shigella flexneri 1235-66]
gi|119369258|sp|Q83PF4.5|ENGB_SHIFL RecName: Full=Probable GTP-binding protein EngB
gi|281603253|gb|ADA76237.1| putative GTP-binding protein engB [Shigella flexneri 2002017]
gi|313647097|gb|EFS11552.1| hypothetical protein SF2457T_4463 [Shigella flexneri 2a str. 2457T]
gi|332751497|gb|EGJ81898.1| hypothetical protein SFK671_4264 [Shigella flexneri K-671]
gi|332753187|gb|EGJ83570.1| hypothetical protein SF274771_4128 [Shigella flexneri 2747-71]
gi|332997588|gb|EGK17203.1| hypothetical protein SFVA6_4456 [Shigella flexneri VA-6]
gi|332998615|gb|EGK18212.1| hypothetical protein SFK218_4644 [Shigella flexneri K-218]
gi|333013840|gb|EGK33202.1| hypothetical protein SFK304_4498 [Shigella flexneri K-304]
gi|391245467|gb|EIQ04735.1| putative GTP-binding protein EngB [Shigella flexneri K-1770]
gi|391263275|gb|EIQ22285.1| putative GTP-binding protein EngB [Shigella flexneri K-404]
gi|391303792|gb|EIQ61622.1| putative GTP-binding protein EngB [Shigella flexneri 1235-66]
gi|397894871|gb|EJL11311.1| cell division protein putative checkpoint GTPase [Shigella flexneri
6603-63]
Length = 210
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A+ + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKALLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|423122886|ref|ZP_17110570.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5246]
gi|376391820|gb|EHT04488.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella oxytoca
10-5246]
Length = 210
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVESDIQVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKTGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|218658399|ref|ZP_03514329.1| GTPase EngB [Rhizobium etli IE4771]
Length = 173
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 13 SSSFPAPDLP-EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KL 65
S +F P+ P E+AFAGRSNVGKSS++NAL Q G+ RTS+ PG TQ +N+F
Sbjct: 21 SLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGE 80
Query: 66 GTKL---CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
G L +VD+PGYG+A A +E D W +LV +Y+ R +LKRV +LID++ G+K D
Sbjct: 81 GGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDE 140
Query: 123 ELISLMERSQ 132
++++L+++++
Sbjct: 141 DVLTLLDKAR 150
>gi|399925393|ref|ZP_10782751.1| GTP-binding protein YsxC, partial [Myroides injenensis M09-0166]
Length = 204
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 1/182 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + +S P +PE AF GRSNVGKSS++N LT + +TS +PG TQ I
Sbjct: 3 INTAEFVVSNSEASKCPNEPIPEYAFIGRSNVGKSSLINMLTNSKYLAKTSSRPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ + LVDLPGYG+A ++ K +++ + +Y R L +LID + +
Sbjct: 63 NHFKINSNWYLVDLPGYGYAKVSKKTKSVFQKFITDYFEKRQQLVSAFVLIDIRHEAQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN-SLVQPVMMVSSKSG 179
D E + + S+ + ++ TK D V V ++++ ANN + + P + SS+
Sbjct: 123 DLEFMQYLGESEIPFSIIFTKADKVGKQKVHSLVAAYKKAMLANNWAEMPPYFVTSSEHK 182
Query: 180 AG 181
G
Sbjct: 183 TG 184
>gi|194335477|ref|YP_002017271.1| ribosome biogenesis GTP-binding protein YsxC [Pelodictyon
phaeoclathratiforme BU-1]
gi|238693375|sp|B4SC74.1|ENGB_PELPB RecName: Full=Probable GTP-binding protein EngB
gi|194307954|gb|ACF42654.1| GTP-binding protein HSR1-related [Pelodictyon phaeoclathratiforme
BU-1]
Length = 193
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 77/138 (55%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F + S P PEI FAGRSNVGKS++LN+LT G+ +TS PG T+ IN+F +
Sbjct: 8 FHISVSALSGLPEDSFPEIVFAGRSNVGKSTLLNSLTGVKGLAKTSATPGKTRLINYFLI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ VDLPGYG+A K W L+ Y+ R S+ V LL+D++ D +I
Sbjct: 68 NRDVYFVDLPGYGYAAVGHAEKALWGNLLSSYIIQRRSISLVVLLLDSRHPAMQSDRAMI 127
Query: 126 SLMERSQTKYQVVLTKTD 143
S +E Y +VLTK D
Sbjct: 128 SFLESHDRPYGIVLTKYD 145
>gi|386826754|ref|ZP_10113861.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Beggiatoa alba
B18LD]
gi|386427638|gb|EIJ41466.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Beggiatoa alba
B18LD]
Length = 207
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
++ ++ +A S P+ E+AFAGRSN GKSS +NA+T+Q + RTS PG TQ I
Sbjct: 5 HQAQYTLSAHNLSQLPSDTGREVAFAGRSNAGKSSAINAITQQKALARTSKTPGRTQQIM 64
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+L K LVDLPGYG+A +K W+ ++ Y+ TR SL + LL+D + + D
Sbjct: 65 FFQLDEKRRLVDLPGYGYAKVSITIKQHWQNTLERYLQTRGSLNGLILLMDIRHPLTDFD 124
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA--NNSLVQPVMMVSSKSG 179
++ + S ++LTK D + +Q++ L A +S V + S+
Sbjct: 125 KNMLLWCQHSAMPVHILLTKADKLSFGAAKSSLLQVKNQLSAFKTDSTDISVQLFSAHKA 184
Query: 180 AGIRSLRTVL 189
G+ R VL
Sbjct: 185 TGVDEARAVL 194
>gi|385262741|ref|ZP_10040843.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK643]
gi|385189920|gb|EIF37374.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK643]
Length = 195
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|89895940|ref|YP_519427.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense Y51]
gi|219670373|ref|YP_002460808.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DCB-2]
gi|423076881|ref|ZP_17065589.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DP7]
gi|119369191|sp|Q24SK9.1|ENGB_DESHY RecName: Full=Probable GTP-binding protein EngB
gi|254783194|sp|B8FVH0.1|ENGB_DESHD RecName: Full=Probable GTP-binding protein EngB
gi|89335388|dbj|BAE84983.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540633|gb|ACL22372.1| small GTP-binding protein domain protein [Desulfitobacterium
hafniense DCB-2]
gi|361851833|gb|EHL04121.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DP7]
Length = 201
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 2/192 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A +P PEIA AGRSNVGKSS++N + + RT + PG TQ +
Sbjct: 4 IRKAEFVTSAVNIKGYPELTGPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQML 63
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+++ + VDLPGYG+A +E+K W ++++EY S R +L+ V ++D +
Sbjct: 64 NFYRINDQWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQVVDIRHVPSVE 123
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E+ + + VV TK D + + QI ++L + + ++ S+++G
Sbjct: 124 DQEMHAFLRNRGIPVLVVATKADKISKGQWGKHLSQIAKALHIPDWHI--IITYSAETGL 181
Query: 181 GIRSLRTVLSKI 192
G+ L + +I
Sbjct: 182 GVPELHEAVEEI 193
>gi|339442439|ref|YP_004708444.1| putative GTPase [Clostridium sp. SY8519]
gi|338901840|dbj|BAK47342.1| predicted GTPase [Clostridium sp. SY8519]
Length = 250
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 88/161 (54%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E +S P D PEIAFAG+SNVGKSS++N L + + RTS PG TQTI
Sbjct: 3 IRKAELETVCGYTSRIPDHDRPEIAFAGKSNVGKSSLINCLLERKSLARTSSSPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + ++ L DLPGYG+A K+ W E+++ Y+ T L V LL+D + +
Sbjct: 63 NFYNVNDQMYLTDLPGYGYAKITLAEKEKWGEMIEHYLHTSQQLCAVFLLLDIRHAPQEN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
D + ME ++ TK D + +V R+ I E+L
Sbjct: 123 DVRMYEWMEYQGYAPIIIATKKDKIKKTEVDRQLNLIRETL 163
>gi|422807553|ref|ZP_16855983.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii B253]
gi|324111948|gb|EGC05928.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii B253]
Length = 210
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPG 55
MN L + V S+ LP E+AFAGRSN GKSS LN LT Q + RTS PG
Sbjct: 1 MNNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPG 60
Query: 56 LTQTINFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKW 115
TQ IN F++ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D +
Sbjct: 61 RTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRH 120
Query: 116 GVKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMM 173
+K D ++I S V+LTK D + AR+A + E++ A N VQ V
Sbjct: 121 PLKDLDQQMIEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VET 177
Query: 174 VSSKSGAGIRSLRTVLS 190
SS G+ LR L
Sbjct: 178 FSSLKKQGVDKLRQKLD 194
>gi|254443449|ref|ZP_05056925.1| GTPase, putative [Verrucomicrobiae bacterium DG1235]
gi|198257757|gb|EDY82065.1| GTPase, putative [Verrucomicrobiae bacterium DG1235]
Length = 216
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +AK P LPE+AF GRSNVGKSS++N LT+Q + + S KPG T+ +NFF
Sbjct: 7 EFLTSAKDLEDCPRSSLPEVAFIGRSNVGKSSLVNMLTKQKSLAKVSKKPGATKLLNFFT 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYGFA + + + E V Y+ R LK +C L+D + D
Sbjct: 67 MNKWWNLVDLPGYGFAQVSKGKQVDFNEAVSGYLMGRTQLKLICALVDARNEPMELDLGF 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQI-EESLKANNSLVQPVMMVSSKSGAG 181
++ +E + +V TKTD D+ RR M I +E+L+A V ++ SS AG
Sbjct: 127 LNWLEDCPVPHVIVFTKTDEEQE-DIWRRNMDIYQETLEALELRVPEMIPCSSVDRAG 183
>gi|269120910|ref|YP_003309087.1| GTP-binding protein HSR1-like protein [Sebaldella termitidis ATCC
33386]
gi|268614788|gb|ACZ09156.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis
ATCC 33386]
Length = 204
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K +F +A V + +P E AF GRSNVGKSS++N+LT + + RTS PG TQ I
Sbjct: 3 IKKTDFIKSAVVINDYPETTEIEFAFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + VDLPGYGFA E VK W +++ +Y+++ K V LL+D +
Sbjct: 63 NFFDVNEDFYFVDLPGYGFAKVPEAVKKNWGKIIADYLNSDRE-KIVFLLLDIRRVPSAE 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E++ +E Y ++ TKTD + ++ +I++ L+ +N + V S+
Sbjct: 122 DIEMLKWLEHYSINYYIIFTKTDKLSNNQKFKQLKEIKKKLEFDN---KDVFFYSALKNT 178
Query: 181 GIRSLRTVL 189
G L +
Sbjct: 179 GREELEEFI 187
>gi|322375631|ref|ZP_08050143.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C300]
gi|321279339|gb|EFX56380.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C300]
Length = 197
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 11 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 71 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI-R 183
++ + +V TK D + + I++ L + S ++ SS + AG+ +
Sbjct: 131 YEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVTKAGMDQ 188
Query: 184 SLRTVLSKI 192
+ T+L K+
Sbjct: 189 AWDTILEKL 197
>gi|293365854|ref|ZP_06612559.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
ATCC 35037]
gi|307703277|ref|ZP_07640222.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|358464448|ref|ZP_09174412.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 058 str. F0407]
gi|406576874|ref|ZP_11052498.1| GTP-binding protein YsxC [Streptococcus sp. GMD6S]
gi|406586803|ref|ZP_11061726.1| GTP-binding protein YsxC [Streptococcus sp. GMD1S]
gi|417934262|ref|ZP_12577582.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. F0392]
gi|419778662|ref|ZP_14304549.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK10]
gi|419783473|ref|ZP_14309259.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK610]
gi|419813951|ref|ZP_14338758.1| GTP-binding protein YsxC [Streptococcus sp. GMD2S]
gi|291315678|gb|EFE56126.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
ATCC 35037]
gi|307623143|gb|EFO02135.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|340770832|gb|EGR93347.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. F0392]
gi|357066848|gb|EHI76981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 058 str. F0407]
gi|383182144|gb|EIC74704.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK610]
gi|383187084|gb|EIC79543.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK10]
gi|404460677|gb|EKA06925.1| GTP-binding protein YsxC [Streptococcus sp. GMD6S]
gi|404472396|gb|EKA16822.1| GTP-binding protein YsxC [Streptococcus sp. GMD2S]
gi|404473742|gb|EKA18070.1| GTP-binding protein YsxC [Streptococcus sp. GMD1S]
Length = 195
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|262404848|ref|ZP_06081402.1| GTP-binding protein EngB [Vibrio sp. RC586]
gi|262348932|gb|EEY98071.1| GTP-binding protein EngB [Vibrio sp. RC586]
Length = 220
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VAEGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQRRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKQFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|182684523|ref|YP_001836270.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae CGSP14]
gi|322377850|ref|ZP_08052339.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M334]
gi|226741185|sp|B2IR86.1|ENGB_STRPS RecName: Full=Probable GTP-binding protein EngB
gi|182629857|gb|ACB90805.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|321281273|gb|EFX58284.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M334]
Length = 197
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 11 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 71 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 131 YEFLKYYEIPVIIVATKADKI 151
>gi|331265986|ref|YP_004325616.1| GTP-binding protein [Streptococcus oralis Uo5]
gi|326682658|emb|CBZ00275.1| GTP-binding protein, putative [Streptococcus oralis Uo5]
Length = 195
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|342164187|ref|YP_004768826.1| GTP-binding protein YsxC [Streptococcus pseudopneumoniae IS7493]
gi|341934069|gb|AEL10966.1| GTP-binding protein YsxC [Streptococcus pseudopneumoniae IS7493]
Length = 195
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|417745485|ref|ZP_12394004.1| cell division protein putative checkpoint GTPase [Shigella flexneri
2930-71]
gi|332764612|gb|EGJ94844.1| cell division protein putative checkpoint GTPase [Shigella flexneri
2930-71]
Length = 207
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 7 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 67 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A+ + E++ A N VQ V SS G+
Sbjct: 127 IEWAVDSNIAVLVLLTKADKL--ASGARKALLNMVREAVLAFNGDVQ-VETFSSLKKQGV 183
Query: 183 RSLRTVLS 190
LR L
Sbjct: 184 DKLRQKLD 191
>gi|303289114|ref|XP_003063845.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla
CCMP1545]
gi|226454913|gb|EEH52218.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla
CCMP1545]
Length = 526
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 15/193 (7%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT---KLCLVD 73
P P+ PEIA GRSNVGKSS++N LT + V +TS PG TQTIN F++ T K LVD
Sbjct: 330 PPPNFPEIAVIGRSNVGKSSLVNLLTGRKDVAKTSKNPGKTQTINHFEMITGDGKWYLVD 389
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR--DHELISLMERS 131
LPGYGFA A E ++ W +EY+ R +L V LLID+ V+P+ D E + + +
Sbjct: 390 LPGYGFANAPERLRKKWALFTREYLLERENLLAVMLLIDST--VEPQRLDLECLEFLGEN 447
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-------PVMMVSSKSGAGIRS 184
+V TK D + +RA + EE+++A V P++ SSK+G G +
Sbjct: 448 DIPVSIVFTKVDKKRKVKSGKRA-KPEENVEAFCREVSEYWEEMPPMIFTSSKTGDGKAA 506
Query: 185 LRTVLSKIARFAK 197
L ++ + +F K
Sbjct: 507 LLNHVATLRQFFK 519
>gi|189347671|ref|YP_001944200.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium limicola
DSM 245]
gi|238692196|sp|B3EGV8.1|ENGB_CHLL2 RecName: Full=Probable GTP-binding protein EngB
gi|189341818|gb|ACD91221.1| GTP-binding protein HSR1-related [Chlorobium limicola DSM 245]
Length = 192
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F+ + + P PEI F GRSNVGKSS+LN+LT G+ +TS PG T+ IN+F++
Sbjct: 8 FYKSVSALTGLPEETFPEIVFVGRSNVGKSSLLNSLTGVKGLAKTSSTPGKTRLINYFQI 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ VDLPGYG+A K W L+ Y+ R ++ V +L+D++ D E++
Sbjct: 68 NGNIYFVDLPGYGYAAVGHAEKAHWGNLLVSYIEKRRAIALVLVLVDSRHPAMASDREMM 127
Query: 126 SLMERSQTKYQVVLTKTDTVFPID--VARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ +E Y +++TK D + + ARR M ES A ++ SS SG G
Sbjct: 128 AFLEYLDRPYGIIMTKDDKLTQKERAAARREM---ESFSAKAKF---IVNYSSFSGKG 179
>gi|340001440|ref|YP_004732324.1| ATP/GTP-binding protein [Salmonella bongori NCTC 12419]
gi|339514802|emb|CCC32572.1| ATP/GTP-binding protein [Salmonella bongori NCTC 12419]
Length = 210
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A ++ E++ A N VQ V SS G+
Sbjct: 130 IQWAVESNIQVLVLLTKADKL--ASGARKAQLNRVREAVLAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVL 189
LR L
Sbjct: 187 DKLRQKL 193
>gi|295425158|ref|ZP_06817863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylolyticus DSM 11664]
gi|295065217|gb|EFG56120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylolyticus DSM 11664]
Length = 196
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 85/143 (59%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N E+ +A +P DLPEIA AGRSNVGKSS++N L + + RTS +PG TQT+
Sbjct: 3 INSSEYAVSAVREDQYPKDDLPEIALAGRSNVGKSSLINTLVNRKNLARTSSQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + LVD+PGYG+A ++ + + E++++Y+ TR +LK + +L+D++
Sbjct: 63 NFYLVNKSFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRANLKGLIILVDSRHVPSKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTD 143
D + + VV TK D
Sbjct: 123 DQSMYEYAQYLNLPILVVCTKID 145
>gi|417923037|ref|ZP_12566511.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK569]
gi|418968520|ref|ZP_13520109.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|419766852|ref|ZP_14293027.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK579]
gi|342837311|gb|EGU71505.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK569]
gi|383352590|gb|EID30276.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383353623|gb|EID31228.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK579]
Length = 195
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|307706171|ref|ZP_07642989.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307618431|gb|EFN97580.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 195
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|182681243|ref|YP_001829403.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
M23]
gi|417558326|ref|ZP_12209308.1| GTPase [Xylella fastidiosa EB92.1]
gi|182631353|gb|ACB92129.1| GTP-binding protein HSR1-related [Xylella fastidiosa M23]
gi|338179130|gb|EGO82094.1| GTPase [Xylella fastidiosa EB92.1]
Length = 219
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ +A P+ D E+AFAGRSN GKSS+LN LTRQ + R S PG TQ + +F
Sbjct: 25 KYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFT 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A +E++ W+ + Y R SL+ + +++D + +K D ++
Sbjct: 85 VTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQM 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP------VMMVSSKS 178
++ + Q +LTK D + R Q + K N L + + SSKS
Sbjct: 145 LAYARQRGLPAQALLTKADKL------GRGQQAQTLQKVRNELTKHFADHINIQTFSSKS 198
Query: 179 GAGIRSLRTVL 189
G+ L TV+
Sbjct: 199 RQGVEQLHTVI 209
>gi|385260655|ref|ZP_10038798.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK140]
gi|385190898|gb|EIF38326.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK140]
Length = 195
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|418976387|ref|ZP_13524260.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK575]
gi|383351474|gb|EID29268.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK575]
Length = 195
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKVDKI 149
>gi|172058153|ref|YP_001814613.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium
sibiricum 255-15]
gi|407477828|ref|YP_006791705.1| GTP-binding protein EngB [Exiguobacterium antarcticum B7]
gi|229807534|sp|B1YJV8.1|ENGB_EXIS2 RecName: Full=Probable GTP-binding protein EngB
gi|171990674|gb|ACB61596.1| small GTP-binding protein [Exiguobacterium sibiricum 255-15]
gi|407061907|gb|AFS71097.1| GTP-binding protein EngB [Exiguobacterium antarcticum B7]
Length = 193
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K +F + +P P LPE+A AGRSNVGKSS +N L ++ + RTS KPG TQT+NF
Sbjct: 5 KADFITSGVNPEHYPEPLLPEVALAGRSNVGKSSFINKLVQRKALARTSSKPGKTQTLNF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + ++ VD+PGYG+A + ++AW +++++Y +TR LK V LL+D + D
Sbjct: 65 FNINDEVMFVDVPGYGYAKVSKTEREAWGKMMEKYFTTREILKGVVLLVDIRHEPSADDV 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ ++ VV TK D + ++ I+ L+ + + SS++G G+
Sbjct: 125 IMYDFLKYYDLSVIVVATKLDKIKRGQRDKQIAAIKRKLQFDGQ--DTFIPFSSETGEGV 182
>gi|399907896|ref|ZP_10776448.1| GTP-binding protein YsxC [Halomonas sp. KM-1]
Length = 214
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A + P D E+AFAGRSN GKSS +N LTRQ + RTS PG TQ INFF L
Sbjct: 11 FLISAPTLAKCPVDDGAEVAFAGRSNAGKSSAINTLTRQKALARTSRTPGRTQLINFFSL 70
Query: 66 GTKLC--LVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
G + LVDLPGYG+A E VK W+ + EY+ R SL+ + L++D + + D
Sbjct: 71 GDDISRRLVDLPGYGYAKVPEAVKLEWQRHLAEYLEGRHSLRGLVLVMDVRHPLTEFDQT 130
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
L+ + ++LTK D + Q+ L+ LV V + SS G+
Sbjct: 131 LLGWADDQDKPVHILLTKADKLKSGAAKNALQQVRSRLREWEDLV-TVQLFSSLKREGV 188
>gi|345301540|ref|YP_004830898.1| GTP-binding protein engB [Enterobacter asburiae LF7a]
gi|345095477|gb|AEN67113.1| GTP-binding protein engB [Enterobacter asburiae LF7a]
Length = 209
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LNALT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNALTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R LK + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRQCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IDWAVASEIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|169832607|ref|YP_001694973.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae Hungary19A-6]
gi|238688373|sp|B1ICY8.1|ENGB_STRPI RecName: Full=Probable GTP-binding protein EngB
gi|168995109|gb|ACA35721.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
Length = 195
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|160878538|ref|YP_001557506.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg]
gi|189037174|sp|A9KHA0.1|ENGB_CLOPH RecName: Full=Probable GTP-binding protein EngB
gi|160427204|gb|ABX40767.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg]
Length = 201
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 85/145 (58%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N+++ V+S P PE AFAG+SNVGKSS++N L + RTS +PG TQTI
Sbjct: 3 VNQVDLETVCGVTSVLPENTQPEFAFAGKSNVGKSSLINGLMNRKSFARTSSQPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ L KL VDLPGYG+A E+K W +++++Y+ T LK + LLID +
Sbjct: 63 NFYHLNEKLYFVDLPGYGYAKVSSELKAKWGKMIEKYLRTSTQLKVIFLLIDIRHEPSAN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D ++ + + + ++ TK D +
Sbjct: 123 DKDMYEWIVHNGFEPVIIATKLDKI 147
>gi|221232329|ref|YP_002511482.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|225861401|ref|YP_002742910.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae Taiwan19F-14]
gi|307704382|ref|ZP_07641297.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307708345|ref|ZP_07644812.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|383938704|ref|ZP_09991908.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae SK674]
gi|387788625|ref|YP_006253693.1| GTP-binding protein [Streptococcus pneumoniae ST556]
gi|415700031|ref|ZP_11457762.1| hypothetical protein CGSSp4595_1568 [Streptococcus pneumoniae
459-5]
gi|415749976|ref|ZP_11477920.1| hypothetical protein CGSSpSV35_1673 [Streptococcus pneumoniae SV35]
gi|415752792|ref|ZP_11479774.1| hypothetical protein CGSSpSV36_1391 [Streptococcus pneumoniae SV36]
gi|417850059|ref|ZP_12495974.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1080]
gi|418123906|ref|ZP_12760837.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44378]
gi|418128451|ref|ZP_12765344.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP170]
gi|418137641|ref|ZP_12774479.1| hypothetical protein SPAR24_1540 [Streptococcus pneumoniae GA11663]
gi|418178629|ref|ZP_12815212.1| hypothetical protein SPAR73_1562 [Streptococcus pneumoniae GA41565]
gi|418221598|ref|ZP_12848251.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47751]
gi|418968445|ref|ZP_13520058.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK616]
gi|419440763|ref|ZP_13980808.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40410]
gi|419473637|ref|ZP_14013486.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13430]
gi|254783212|sp|B8ZLT0.1|ENGB_STRPJ RecName: Full=Probable GTP-binding protein EngB
gi|254783216|sp|C1CSI8.1|ENGB_STRZT RecName: Full=Probable GTP-binding protein EngB
gi|220674790|emb|CAR69363.1| putative GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|225726988|gb|ACO22839.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|307615791|gb|EFN94997.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307622067|gb|EFO01089.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|339455392|gb|EGP67999.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1080]
gi|353795726|gb|EHD76072.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44378]
gi|353798950|gb|EHD79273.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP170]
gi|353842688|gb|EHE22734.1| hypothetical protein SPAR73_1562 [Streptococcus pneumoniae GA41565]
gi|353874908|gb|EHE54762.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47751]
gi|353900596|gb|EHE76147.1| hypothetical protein SPAR24_1540 [Streptococcus pneumoniae GA11663]
gi|379138367|gb|AFC95158.1| GTP-binding protein [Streptococcus pneumoniae ST556]
gi|379550801|gb|EHZ15897.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13430]
gi|379577833|gb|EHZ42750.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40410]
gi|381308439|gb|EIC49282.1| hypothetical protein CGSSpSV36_1391 [Streptococcus pneumoniae SV36]
gi|381315022|gb|EIC55786.1| hypothetical protein CGSSp4595_1568 [Streptococcus pneumoniae
459-5]
gi|381318270|gb|EIC58995.1| hypothetical protein CGSSpSV35_1673 [Streptococcus pneumoniae SV35]
gi|383340306|gb|EID18614.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK616]
gi|383714434|gb|EID70436.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae SK674]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|416053384|ref|ZP_11578849.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SC1083]
gi|347991159|gb|EGY32658.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SC1083]
Length = 204
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 93/160 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F ++ S P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++++ EY+ R L + +L+D + +K D
Sbjct: 69 LFEVEPQCKLVDLPGYGYAAVPEQMKLQWQQVLGEYLQKRECLAGIVILMDIRHPLKDVD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++I SQ ++LTK D + + +++ + E++
Sbjct: 129 QQMIEWAVASQLPVLLLLTKADKLSQSERSKQVKMVREAI 168
>gi|297811265|ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297319353|gb|EFH49775.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
PA LPE A GRSNVGKSS+LN+L R+ + TS KPG TQ IN F++ K LVDLPG
Sbjct: 131 PADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLVDLPG 190
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YG+A A E+K W + K+Y R +L V LL+D VK D E S + ++Q
Sbjct: 191 YGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKQIDLEYASWLGQNQVPMT 250
Query: 137 VVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-------PVMMVSSKSGAG 181
++ TK D + EE++K L+Q P +M SS + G
Sbjct: 251 LIFTKCDKR--KKKKNGGKKPEENIKEFQDLIQGFFETTPPWIMTSSVTNQG 300
>gi|429094100|ref|ZP_19156654.1| GTP-binding protein EngB [Cronobacter dublinensis 1210]
gi|426740899|emb|CCJ82767.1| GTP-binding protein EngB [Cronobacter dublinensis 1210]
Length = 211
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E+ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIPVLVLLTKADKL--ASGARKAQLNMVREAAIAFNGDVQ-VEAFSSLKKMGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRGKLD 194
>gi|449509139|ref|XP_004163505.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At2g22870-like
[Cucumis sativus]
Length = 315
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 85/143 (59%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+++ +F ++ + P+ LPE A GRSNVGKSS+LN+L R+ + TS KPG TQ I
Sbjct: 113 VSQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCI 172
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N F++ LVDLPGYG+A A +E++ W + ++Y R +L V LLID KP
Sbjct: 173 NHFRINDSWYLVDLPGYGYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPI 232
Query: 121 DHELISLMERSQTKYQVVLTKTD 143
D + S + ++Q ++ TK D
Sbjct: 233 DLDYASWLGQNQIPMTIIFTKCD 255
>gi|322387324|ref|ZP_08060934.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|419842677|ref|ZP_14366014.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|321141853|gb|EFX37348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|385703622|gb|EIG40735.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|383192258|ref|YP_005202386.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371590516|gb|AEX54246.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 216
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT+Q + RTS PG TQ IN F+
Sbjct: 12 HFVMSAPDIRHLPSDAGIEVAFAGRSNAGKSSALNTLTQQKSLARTSKTPGRTQLINLFE 71
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A EE+K W+ + EY+ R SLK + +L+D + +K DH++
Sbjct: 72 VKPGIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNSLKGLVVLMDIRHPLKDLDHQM 131
Query: 125 ISLMERSQTKYQVVLTKTD 143
I T ++LTK D
Sbjct: 132 IQWAVDVGTPVMLLLTKAD 150
>gi|377578489|ref|ZP_09807466.1| putative GTP-binding protein EngB [Escherichia hermannii NBRC
105704]
gi|377540075|dbj|GAB52631.1| putative GTP-binding protein EngB [Escherichia hermannii NBRC
105704]
Length = 211
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQ 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R L+ + +L+D + +K D ++
Sbjct: 70 VAEGRRLVDLPGYGYAEVPEEMKLKWQRALAEYLHARQCLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I SQ V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IHWAVESQIPVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKIGV 186
Query: 183 RSLRTVL 189
LR L
Sbjct: 187 DKLRQKL 193
>gi|422862678|ref|ZP_16909310.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK408]
gi|327474151|gb|EGF19561.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK408]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYNIPVILVATKADKI 149
>gi|422821312|ref|ZP_16869505.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK353]
gi|422870989|ref|ZP_16917482.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1087]
gi|324991226|gb|EGC23160.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK353]
gi|328946143|gb|EGG40288.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1087]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYNIPVILVATKADKI 149
>gi|309799590|ref|ZP_07693816.1| GTP-binding protein [Streptococcus infantis SK1302]
gi|308116778|gb|EFO54228.1| GTP-binding protein [Streptococcus infantis SK1302]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A + ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKNEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|343084511|ref|YP_004773806.1| GTP-binding protein engB [Cyclobacterium marinum DSM 745]
gi|342353045|gb|AEL25575.1| GTP-binding protein engB [Cyclobacterium marinum DSM 745]
Length = 201
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 82/127 (64%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
PAP PE AF GRSNVGKSS++N LT + +TS KPG TQ IN F++ ++ +VDLPG
Sbjct: 18 PAPTKPEFAFIGRSNVGKSSLINMLTNHKHLAKTSGKPGKTQLINHFEIDSRWYMVDLPG 77
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YGFA A +++K W ++++ Y++ R +L V +LID++ + D E I+ + +
Sbjct: 78 YGFAKANKKLKAEWNKMIRNYLTERENLVSVFVLIDSRLNPQAIDIEFITWCGQLELPVT 137
Query: 137 VVLTKTD 143
++ TK D
Sbjct: 138 LIFTKAD 144
>gi|330004746|ref|ZP_08305015.1| ribosome biogenesis GTP-binding protein YsxC, partial [Klebsiella
sp. MS 92-3]
gi|328536532|gb|EGF62869.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. MS
92-3]
Length = 175
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQ 169
I S + V+LTK D + AR+A + E++ A N VQ
Sbjct: 130 IEWAVESDIQVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ 174
>gi|422846588|ref|ZP_16893271.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK72]
gi|325687396|gb|EGD29417.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK72]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVVLVATKADKI 149
>gi|258405422|ref|YP_003198164.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium
retbaense DSM 5692]
gi|257797649|gb|ACV68586.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium
retbaense DSM 5692]
Length = 205
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 5/191 (2%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
LE A + FP+ D+P++A AGRSNVGKSS++NAL + + + S PG T+++NF+
Sbjct: 4 LELETTAYTAEQFPSLDVPQVALAGRSNVGKSSLINALAGRKKLAKISSTPGKTRSLNFY 63
Query: 64 K-LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+ G LVDLPGYG+A + + W L+ Y L+ V +L+D++ + D
Sbjct: 64 RAAGDGFYLVDLPGYGYAKRSKTERGQWAALMDVYFQKSTGLQAVVVLLDSRLPPQKLDL 123
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
ELIS ++R LTK D D +R Q +E L S P+++ S+K+G G
Sbjct: 124 ELISFLQRESIPLIAALTKADKCKNKDRSRVQRQWKELL----SPSAPLILFSAKTGMGK 179
Query: 183 RSLRTVLSKIA 193
++L + + A
Sbjct: 180 QTLWAAIREAA 190
>gi|432367333|ref|ZP_19610444.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE10]
gi|430890568|gb|ELC13197.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE10]
Length = 210
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VANGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|15644215|ref|NP_229266.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
gi|418045523|ref|ZP_12683618.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
gi|13124246|sp|Q9X1H7.1|ENGB_THEMA RecName: Full=Probable GTP-binding protein EngB
gi|335892384|pdb|3PQC|A Chain A, Crystal Structure Of Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb (YsxcYIHA) IN
COMPLEX WITH GDP
gi|335892385|pdb|3PQC|B Chain B, Crystal Structure Of Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb (YsxcYIHA) IN
COMPLEX WITH GDP
gi|335892386|pdb|3PR1|A Chain A, Crystal Structure Of Apo Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb
gi|4982031|gb|AAD36534.1|AE001797_14 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351676408|gb|EHA59561.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 111/194 (57%), Gaps = 9/194 (4%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+E A+ +P P E+AF GRSNVGKSS+LNAL + + S PG T++INF+
Sbjct: 6 VELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNR-KIAFVSKTPGKTRSINFY 64
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ +K VDLPGYG+A ++ + W+ LV++Y R SL+ V LL+D + + P+D +
Sbjct: 65 LVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGR--IPPQDSD 122
Query: 124 L--ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-PVMMVSSKSGA 180
L + M+ + +VLTK D V ++ RA ++EE K + + ++ SS +G
Sbjct: 123 LMMVEWMKSLNIPFTIVLTKMDKV---KMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGE 179
Query: 181 GIRSLRTVLSKIAR 194
GI L ++S + +
Sbjct: 180 GISELLDLISTLLK 193
>gi|417847325|ref|ZP_12493293.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1073]
gi|339456973|gb|EGP69554.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1073]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDNKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVGTKADKI 149
>gi|422848751|ref|ZP_16895427.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK115]
gi|422851692|ref|ZP_16898362.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK150]
gi|422854192|ref|ZP_16900856.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK160]
gi|325689772|gb|EGD31776.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK115]
gi|325694580|gb|EGD36489.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK150]
gi|325696428|gb|EGD38318.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK160]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVILVATKADKI 149
>gi|335029647|ref|ZP_08523154.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK1076]
gi|334268944|gb|EGL87376.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK1076]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|417001842|ref|ZP_11941347.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479728|gb|EGC82818.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
++E A S +P+ DL E+AF GRSNVGKSS +N+ + + +TS KPG T+TINF
Sbjct: 5 EIELEQVAGFKSQWPSEDLVELAFVGRSNVGKSSFINSFLGRKNLAKTSSKPGKTRTINF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+++ LVDLPGYG+A ++ K W++L+ EY+ R +L+ V LL+D + +D
Sbjct: 65 YRINNNFRLVDLPGYGYAKVSKKEKAKWDKLINEYLYERDNLREVFLLVDIRHEPTAQDK 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++ + S V+ TK D + + + QI++ L
Sbjct: 125 QMYDWIIESGFTGFVIATKFDKIKKGQIQKHINQIKKKL 163
>gi|444920162|ref|ZP_21240005.1| Putative GTP-binding protein EngB [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508481|gb|ELV08650.1| Putative GTP-binding protein EngB [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 203
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 88/157 (56%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A + P D E+AFAGRSN GKSS LNALT Q + RTS PG TQ IN+F++
Sbjct: 13 FLTSANQLNQLPDNDGREVAFAGRSNAGKSSALNALTSQNTLARTSKTPGRTQLINYFEV 72
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K LVDLPGYG+A E ++ W +++ Y TR +L + +L+D + + P D +++
Sbjct: 73 DEKSYLVDLPGYGYAKVPERIRLHWRSVLQGYFETRKNLVGLVMLMDVRHPLTPLDLQML 132
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
E ++LTK D + Q++ +LK
Sbjct: 133 EWCEAQNLPTHILLTKADKLKRGPAKTALFQVQAALK 169
>gi|422823655|ref|ZP_16871843.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK405]
gi|422826273|ref|ZP_16874452.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK678]
gi|422855589|ref|ZP_16902247.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1]
gi|422865564|ref|ZP_16912189.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1058]
gi|324992982|gb|EGC24902.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK405]
gi|324995709|gb|EGC27621.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK678]
gi|327462278|gb|EGF08605.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1]
gi|327489631|gb|EGF21423.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1058]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVILVATKADKI 149
>gi|190570517|ref|YP_001974875.1| ribosome biogenesis GTP-binding protein YsxC [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213019273|ref|ZP_03335080.1| GTP-binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|353327644|ref|ZP_08969971.1| GTP-binding protein YsxC [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
gi|238058990|sp|B3CL86.1|ENGB_WOLPP RecName: Full=Probable GTP-binding protein EngB
gi|190356789|emb|CAQ54151.1| GTP-binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995382|gb|EEB56023.1| GTP-binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 197
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A S P PEIAFAGRSNVGKSS++N L R S KPG T+ INF+ +
Sbjct: 11 FIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSM 70
Query: 66 -GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
K +VDLPGYG++ A +E + L++ Y+ R +LKRV +LID+K G+K D +
Sbjct: 71 YNDKFRIVDLPGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSKVGLKEIDKDF 130
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
+ + + + +VLTK D V
Sbjct: 131 VYWLICNNINFNIVLTKIDKV 151
>gi|408790465|ref|ZP_11202084.1| GTP-binding protein EngB [Lactobacillus florum 2F]
gi|408520189|gb|EKK20277.1| GTP-binding protein EngB [Lactobacillus florum 2F]
Length = 200
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
++ +A + +P PEI F GRSNVGKSS+ N L + TS +PG TQT+NF+
Sbjct: 6 VQLVMSAVSPAQYPTTGYPEIGFLGRSNVGKSSLTNVLIERKDYAHTSGQPGKTQTLNFY 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+L KL VD+PGYG+A ++ ++ W E+++ Y++ R +L V LID++ + D +
Sbjct: 66 ELNHKLYFVDVPGYGYAKVSKQAREKWAEMIETYLTQRSTLAGVVNLIDSRHALSDYDRQ 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK--ANNSLVQPVMMVSSKSGAG 181
+ + Q V TK D + V +A +++ L A+ SLV M S+K+ G
Sbjct: 126 MHDWLAYYQIPTLYVATKMDKLAKSKVKAQAKDLQQQLHLTADQSLV----MFSAKTKQG 181
>gi|421488730|ref|ZP_15936118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK304]
gi|400367947|gb|EJP20962.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK304]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|331003806|ref|ZP_08327298.1| GTP-binding protein engB [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411998|gb|EGG91395.1| GTP-binding protein engB [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 197
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 90/161 (55%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E ++S FP PEI FAG+SNVGKSS++NAL + + RTS KPG TQTI
Sbjct: 3 IKKAELETVCGITSKFPDNKEPEIVFAGKSNVGKSSLINALMNRKSLARTSGKPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++K+ L VDLPGYG+A A K+ W ++++ Y+ T +K + LLID +
Sbjct: 63 NYYKVNDDLYFVDLPGYGYANANLATKEKWGKMIERYLHTSKQIKCIFLLIDIRHEPGKN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
D ++ + + ++ TK D + +A+ + E L
Sbjct: 123 DKQMYDWIVYNGYSPVIIATKLDKLKRSQIAKCVKAVREGL 163
>gi|145300976|ref|YP_001143817.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418362655|ref|ZP_12963281.1| GTP-binding protein YsxC [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|166225938|sp|A4ST47.1|ENGB_AERS4 RecName: Full=Probable GTP-binding protein EngB
gi|142853748|gb|ABO92069.1| GTP binding protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|356686104|gb|EHI50715.1| GTP-binding protein YsxC [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 217
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK+ F +A P EIAFAGRSN GKSS LN LT+ + RTS PG TQ IN
Sbjct: 9 NKVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+L LVDLPGYG+A E+K W++ + EY+ R SLK + +L+D + +K D
Sbjct: 69 LFELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ + ++LTK D + P + +++ +++ +Q V SS + G
Sbjct: 129 MNMLEWSSHRELPVMLLLTKADKLSPGPRNNQVIKVRQAIADLGPQIQ-VEAFSSLNNIG 187
Query: 182 IRSLRTVLS 190
+ L LS
Sbjct: 188 VEKLAQTLS 196
>gi|417818710|ref|ZP_12465331.1| putative GTP-binding protein EngB [Vibrio cholerae HE39]
gi|423943390|ref|ZP_17733051.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HE-40]
gi|423973244|ref|ZP_17736596.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HE-46]
gi|340044059|gb|EGR05014.1| putative GTP-binding protein EngB [Vibrio cholerae HE39]
gi|408662580|gb|EKL33512.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HE-40]
gi|408666548|gb|EKL37332.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HE-46]
Length = 220
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W+ + EY+ R SLK + +L+D + + D +L
Sbjct: 71 VADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMTDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I QV+LTK D + + +++ E K V V SS SG G+ +
Sbjct: 131 IIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDV-AVDAFSSLSGIGVDT 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRAKLDE 196
>gi|260599982|ref|YP_003212553.1| GTP-binding protein YsxC [Cronobacter turicensis z3032]
gi|260219159|emb|CBA34514.1| Probable GTP-binding protein engB [Cronobacter turicensis z3032]
Length = 220
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 19 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 78
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 79 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 138
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E+ A N VQ V SS +G+
Sbjct: 139 IEWAVDSDIPVLVLLTKADKL--ASGARKAQLNMVREAALAFNGDVQ-VEAFSSLKKSGV 195
Query: 183 RSLRTVLS 190
LR L
Sbjct: 196 DKLRIKLD 203
>gi|432855928|ref|ZP_20083552.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE144]
gi|431396613|gb|ELG80090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE144]
Length = 210
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASSARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|125717924|ref|YP_001035057.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK36]
gi|422858546|ref|ZP_16905196.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1057]
gi|422860217|ref|ZP_16906861.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK330]
gi|166226980|sp|A3CMV2.1|ENGB_STRSV RecName: Full=Probable GTP-binding protein EngB
gi|125497841|gb|ABN44507.1| GTP-binding protein, putative [Streptococcus sanguinis SK36]
gi|327460432|gb|EGF06769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1057]
gi|327470115|gb|EGF15579.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK330]
Length = 195
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVILVATKADKI 149
>gi|429102475|ref|ZP_19164449.1| GTP-binding protein EngB [Cronobacter turicensis 564]
gi|426289124|emb|CCJ90562.1| GTP-binding protein EngB [Cronobacter turicensis 564]
Length = 211
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E+ A N VQ V SS +G+
Sbjct: 130 IEWAVDSDIPVLVLLTKADKL--ASGARKAQLNMVREAALAFNGDVQ-VEAFSSLKKSGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRIKLD 194
>gi|401683083|ref|ZP_10814972.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
AS14]
gi|400183765|gb|EJO18016.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
AS14]
Length = 195
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVILVATKADKI 149
>gi|52426052|ref|YP_089189.1| ribosome biogenesis GTP-binding protein YsxC [Mannheimia
succiniciproducens MBEL55E]
gi|81609396|sp|Q65R06.1|ENGB_MANSM RecName: Full=Probable GTP-binding protein EngB
gi|52308104|gb|AAU38604.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 205
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A P + EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFMTSAANIHQLPKDEGMEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++ + EY+ R LK V +L+D + +K D
Sbjct: 69 LFEVEPQYKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLKGVVILMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++I S ++LTK D + +++ + E++ VQ V S+++ G
Sbjct: 129 QQMIEWAVSSDLPVLLLLTKADKLSQSARSKQVKTVREAILPFQGDVQ-VEAFSAQNKIG 187
Query: 182 IRSL 185
I L
Sbjct: 188 IDKL 191
>gi|347731039|ref|ZP_08864146.1| small GTP-binding domain protein [Desulfovibrio sp. A2]
gi|347520240|gb|EGY27378.1| small GTP-binding domain protein [Desulfovibrio sp. A2]
Length = 239
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 6/196 (3%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
LE A A D P+IAFAGRSNVGKSS++N+L R+ G+ + S PG T++IN++
Sbjct: 5 LELEATVYTLEQMRAFDAPQIAFAGRSNVGKSSLVNSLARRKGLAKISATPGKTRSINYY 64
Query: 64 KLGTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
++ +VDLPGYG+A +E + W L++ Y++T +LK + +L+D++ + D
Sbjct: 65 RVKPDGFYVVDLPGYGYAKCSKEERQKWATLIERYLTTCPTLKALAVLLDSRLDPQRLDL 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+L S +S VLTK D + A R Q + L LV VS+K+G G+
Sbjct: 125 DLTSFARKSGITLLPVLTKADKCTQRERAERQRQWRDILGGIAPLV-----VSAKTGLGV 179
Query: 183 RSLRTVLSKIARFAKV 198
+L L K+ +V
Sbjct: 180 DNLWAALRKVVTVGEV 195
>gi|253579812|ref|ZP_04857080.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848811|gb|EES76773.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 201
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 89/151 (58%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P + PE+AFAG+SNVGKSS++N L + + RTS +PG TQTINF+ + + L
Sbjct: 14 ITSKLPDTNRPEVAFAGKSNVGKSSLINGLMNRKSLARTSAQPGKTQTINFYNINEAMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A + K+ W ++++ Y+ T +LK V LLID + D + + +
Sbjct: 74 VDLPGYGYAKVSQSEKEKWGKMIERYLHTSKNLKAVFLLIDIRHDPSANDKMMYDWILNN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
+ ++ TK D + V + I+E LK
Sbjct: 134 GYEPIIIATKLDKLKRSQVQKNIKAIKEGLK 164
>gi|417941351|ref|ZP_12584638.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK313]
gi|343388644|gb|EGV01230.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK313]
Length = 195
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|322391569|ref|ZP_08065038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris
ATCC 700780]
gi|321145652|gb|EFX41044.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris
ATCC 700780]
Length = 195
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|116494828|ref|YP_806562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei
ATCC 334]
gi|191638335|ref|YP_001987501.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei
BL23]
gi|239631580|ref|ZP_04674611.1| GTPase EngB [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066389|ref|YP_003788412.1| GTPase [Lactobacillus casei str. Zhang]
gi|385820036|ref|YP_005856423.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei
LC2W]
gi|385823236|ref|YP_005859578.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei
BD-II]
gi|409997200|ref|YP_006751601.1| GTP-binding protein EngB [Lactobacillus casei W56]
gi|417980628|ref|ZP_12621308.1| GTP-binding protein [Lactobacillus casei 12A]
gi|417986706|ref|ZP_12627272.1| GTP-binding protein [Lactobacillus casei 32G]
gi|417989590|ref|ZP_12630093.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|417999035|ref|ZP_12639248.1| GTP-binding protein [Lactobacillus casei T71499]
gi|418005044|ref|ZP_12645044.1| GTP-binding protein [Lactobacillus casei UW1]
gi|418007936|ref|ZP_12647807.1| GTP-binding protein [Lactobacillus casei UW4]
gi|418010794|ref|ZP_12650565.1| GTP-binding protein [Lactobacillus casei Lc-10]
gi|122263754|sp|Q039K2.1|ENGB_LACC3 RecName: Full=Probable GTP-binding protein EngB
gi|238693035|sp|B3WE42.1|ENGB_LACCB RecName: Full=Probable GTP-binding protein EngB
gi|116104978|gb|ABJ70120.1| Predicted GTPase [Lactobacillus casei ATCC 334]
gi|190712637|emb|CAQ66643.1| Probable GTP-binding protein engB [Lactobacillus casei BL23]
gi|239526045|gb|EEQ65046.1| GTPase EngB [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438796|gb|ADK18562.1| Predicted GTPase [Lactobacillus casei str. Zhang]
gi|327382363|gb|AEA53839.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei
LC2W]
gi|327385563|gb|AEA57037.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei
BD-II]
gi|406358212|emb|CCK22482.1| Probable GTP-binding protein EngB [Lactobacillus casei W56]
gi|410524951|gb|EKP99858.1| GTP-binding protein [Lactobacillus casei 12A]
gi|410525167|gb|EKQ00073.1| GTP-binding protein [Lactobacillus casei 32G]
gi|410537810|gb|EKQ12377.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|410539975|gb|EKQ14497.1| GTP-binding protein [Lactobacillus casei T71499]
gi|410547695|gb|EKQ21921.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410548041|gb|EKQ22261.1| GTP-binding protein [Lactobacillus casei UW1]
gi|410553373|gb|EKQ27376.1| GTP-binding protein [Lactobacillus casei Lc-10]
Length = 198
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A ++ +P PEIAF GRSNVGKSS++N L ++ + RTS PG TQT+NF+ L ++
Sbjct: 11 SAVAAAQYPEDGHPEIAFLGRSNVGKSSLINKLIQRKAMARTSGVPGKTQTLNFYDLDSR 70
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + + +++ Y++TR L+ V LL+D++ D + +
Sbjct: 71 LFFVDVPGYGYAKVSKTARAKFAAMIETYLTTRQPLRGVVLLVDSRHEPTADDISMYQYL 130
Query: 129 ERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTV 188
+ Q + VV TK D A QI++ L N + V++ S+ +G G ++ +
Sbjct: 131 KYYQLRTLVVATKIDKTPKSKRLHVAKQIKQRLDLNQT--DDVILFSATTGEGYEAVWSW 188
Query: 189 LSKIA 193
L + A
Sbjct: 189 LEQTA 193
>gi|261342937|ref|ZP_05970795.1| hypothetical protein ENTCAN_09535 [Enterobacter cancerogenus ATCC
35316]
gi|288314685|gb|EFC53623.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter
cancerogenus ATCC 35316]
Length = 209
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I+ S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IAWAVESDIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|326803637|ref|YP_004321455.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650781|gb|AEA00964.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae
ACS-120-V-Col10a]
Length = 200
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+EF +A +P D PEIA AGRSNVGKSS +N +T + R S KPG TQ +N++
Sbjct: 7 IEFMLSAASPKQYPVSDRPEIALAGRSNVGKSSFINTMTNHKKIARISSKPGKTQQLNYY 66
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
L L LVD+PGYG+A + + W++ + +Y R +L+ V LL+D + D
Sbjct: 67 NLDNSLYLVDVPGYGYAKVSKTERSRWQKQLADYFIQRENLEAVFLLVDFRHRPSKDDIN 126
Query: 124 LISLMERSQTKYQVVLTKTDTV 145
+ +++ Q Y ++ TK D V
Sbjct: 127 MKDFLDQCQVPYFIIATKADKV 148
>gi|299471340|emb|CBN79295.1| YihA2, YihA/EngB-like GTPase [Ectocarpus siliculosus]
Length = 247
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 10/198 (5%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E+ + A ++ P D PE+AF GRSN GKS+++ L + +VR S PG T+T+N+F
Sbjct: 49 EYVSPASLNHELPTADTPEVAFIGRSNQGKSTLVGKLLKNPKLVRASKSPGCTKTVNYFA 108
Query: 65 L------GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVS--LKRVCLLIDTKWG 116
L + LVDLPGYGFA + W + V Y+ R S L+R +L+D + G
Sbjct: 109 LREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHG 168
Query: 117 VKPRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMM-VS 175
++P D +++S + + VVLTK D P + ++++ L ++ P++ +S
Sbjct: 169 LQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLV-QSLEGAFQLAVHHPATLPIVHCIS 227
Query: 176 SKSGAGIRSLRTVLSKIA 193
+ G G+ + L ++
Sbjct: 228 AHKGQGMGEFQNTLYGVS 245
>gi|422878929|ref|ZP_16925395.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1059]
gi|422928775|ref|ZP_16961717.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 29667]
gi|422931749|ref|ZP_16964680.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK340]
gi|332366631|gb|EGJ44374.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1059]
gi|339616043|gb|EGQ20701.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 29667]
gi|339619481|gb|EGQ24060.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK340]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVILVATKADKI 149
>gi|160944173|ref|ZP_02091403.1| hypothetical protein FAEPRAM212_01680 [Faecalibacterium prausnitzii
M21/2]
gi|158444849|gb|EDP21853.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium
prausnitzii M21/2]
gi|295105079|emb|CBL02623.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Faecalibacterium
prausnitzii SL3/3]
Length = 200
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
NK +F A+ +SS P D PE++F+GRSNVGKSS++N L + + R S PG T TI
Sbjct: 3 FNKADFIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCSRKNLARVSSTPGKTATI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + VDLPGYG+A ++ W++L+ Y + L+D +
Sbjct: 63 NFYSV-DDCYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLVQLLDCRHAPSAD 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D +++ + + Y V LTK D + +A+ E + Q V++ S ++G
Sbjct: 122 DLQMLRYLHYHRIPYVVALTKADKLKKSQLAKTQEDFENICRPYG--CQKVVLTSGENGY 179
Query: 181 GIRSLRTVL 189
GI L+ VL
Sbjct: 180 GIPELQAVL 188
>gi|331649708|ref|ZP_08350788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M605]
gi|331041341|gb|EGI13491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M605]
Length = 215
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 15 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 75 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 135 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 191
Query: 183 RSLRTVLS 190
LR L
Sbjct: 192 DKLRQKLD 199
>gi|323351644|ref|ZP_08087298.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis VMC66]
gi|322122130|gb|EFX93856.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis VMC66]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
+ +V TK D +
Sbjct: 129 YEFLRYYNIPVILVATKADKI 149
>gi|417664509|ref|ZP_12314088.1| GTP-binding protein EngB [Escherichia coli AA86]
gi|330908183|gb|EGH36702.1| GTP-binding protein EngB [Escherichia coli AA86]
Length = 210
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|421213504|ref|ZP_15670459.1| hypothetical protein AMCSP12_001390 [Streptococcus pneumoniae
2070108]
gi|421218201|ref|ZP_15675095.1| hypothetical protein AMCSP13_001850 [Streptococcus pneumoniae
2070335]
gi|395579258|gb|EJG39762.1| hypothetical protein AMCSP12_001390 [Streptococcus pneumoniae
2070108]
gi|395582970|gb|EJG43419.1| hypothetical protein AMCSP13_001850 [Streptococcus pneumoniae
2070335]
Length = 157
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|392957358|ref|ZP_10322882.1| GTP-binding protein YsxC [Bacillus macauensis ZFHKF-1]
gi|391876765|gb|EIT85361.1| GTP-binding protein YsxC [Bacillus macauensis ZFHKF-1]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K + +A +P LPEI AGRSNVGKSS +N + + + RTS +PG TQT+
Sbjct: 3 VTKADIVISAVKPEQYPVDQLPEIGLAGRSNVGKSSFINKMIARKNLARTSSRPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + +L VD+PGYGFA + ++AW ++++ Y+ R LK V LL+D +
Sbjct: 63 NFYIINDQLYFVDVPGYGFAKVSKSEREAWGKMIERYIMERPQLKAVVLLVDLRHAPSVD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + ++ + +V TK D + + ++E+LK P+++ SS++G
Sbjct: 123 DVLMYEWLKHYEIPVIIVATKCDKIPKGKWQKHLKVVKETLKKKPE--DPLLLFSSETGY 180
Query: 181 G 181
G
Sbjct: 181 G 181
>gi|335047139|ref|ZP_08540160.1| ribosome biogenesis GTP-binding protein YsxC [Parvimonas sp. oral
taxon 110 str. F0139]
gi|333760947|gb|EGL38502.1| ribosome biogenesis GTP-binding protein YsxC [Parvimonas sp. oral
taxon 110 str. F0139]
Length = 196
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 6/190 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E A + S +P DL E+AFAGRSNVGKSS +NA + + RTS KPG T+T+NF+K
Sbjct: 7 ELEQIAAIISQYPDSDLKEVAFAGRSNVGKSSFINAFINRKNLARTSSKPGKTRTVNFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A + K+ W +++ Y+S R +L V L++D + D +
Sbjct: 67 INNSFRLVDLPGYGYAQVSKSEKEKWGVIIETYLSNRENLCEVILIVDIRHAPSKEDVMM 126
Query: 125 IS-LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN-SLVQPVMMVSSKSGAGI 182
+ L+E + Y V+ TK D + + + E+L + +LV P SS S A +
Sbjct: 127 YNWLLEYGFSGY-VIATKADKISKGQWNKHLKVVRETLGIKDMNLVIP---FSSDSKANL 182
Query: 183 RSLRTVLSKI 192
++ + +I
Sbjct: 183 EAVHNKIEEI 192
>gi|296105443|ref|YP_003615589.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059902|gb|ADF64640.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 209
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IDWAVASDIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|281412764|ref|YP_003346843.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
naphthophila RKU-10]
gi|281373867|gb|ADA67429.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
naphthophila RKU-10]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ +E A+ +P P E+AF GRSNVGKSS+LNAL + + S PG T++I
Sbjct: 3 IQDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNK-KIAFVSKTPGKTRSI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + +K VDLPGYG+A ++ + W+ LV++Y R SL+ V LL+D + + P+
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGR--IPPQ 119
Query: 121 DHEL--ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-PVMMVSSK 177
D +L + M+ + +VLTK D V ++ RA ++EE K + + ++ SS
Sbjct: 120 DSDLMMVEWMKSLNIPFTIVLTKMDKV---KMSERAKKLEEHQKEFSRYGEYTIIPTSSV 176
Query: 178 SGAGIRSLRTVLSKIAR 194
+G GI L ++S + +
Sbjct: 177 TGEGISELLDLISTLLK 193
>gi|325981834|ref|YP_004294236.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp.
AL212]
gi|325531353|gb|ADZ26074.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp.
AL212]
Length = 198
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 82/138 (59%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F+ +A P EIAF+GRSN GKSS +NALT + + S PG TQ INFF+L
Sbjct: 9 FYTSAHERRDLPKHSGIEIAFSGRSNAGKSSAINALTNRNRLAFVSKTPGRTQLINFFQL 68
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ LVDLPGYG+A E V+ W+ L+ Y+ TR SL+ + L++D + +KP+D +++
Sbjct: 69 ASNQFLVDLPGYGYAKVPEHVRLHWKNLLSNYLQTRNSLRGLILVMDIRHPLKPQDIQML 128
Query: 126 SLMERSQTKYQVVLTKTD 143
+ ++LTK D
Sbjct: 129 DWFSSTGKVIHILLTKAD 146
>gi|417938689|ref|ZP_12581984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK970]
gi|343390933|gb|EGV03511.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK970]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYKIPVIIVATKADKI 149
>gi|334121890|ref|ZP_08495934.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter
hormaechei ATCC 49162]
gi|333392671|gb|EGK63772.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter
hormaechei ATCC 49162]
Length = 227
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 28 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 87
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 88 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHPLKDLDQQM 147
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A ++ E++ A N VQ V SS G+
Sbjct: 148 IDWAVASDIAVLVLLTKADKL--ASGARKAQVNKVREAVLAFNGDVQ-VEPFSSLKKQGV 204
Query: 183 RSLRTVLS 190
LR L
Sbjct: 205 DKLRQKLD 212
>gi|156936144|ref|YP_001440060.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii
ATCC BAA-894]
gi|389839022|ref|YP_006341106.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii
ES15]
gi|429118495|ref|ZP_19179258.1| GTP-binding protein EngB [Cronobacter sakazakii 680]
gi|156534398|gb|ABU79224.1| hypothetical protein ESA_04042 [Cronobacter sakazakii ATCC BAA-894]
gi|387849498|gb|AFJ97595.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii
ES15]
gi|426327041|emb|CCK09995.1| GTP-binding protein EngB [Cronobacter sakazakii 680]
Length = 222
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 21 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 80
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 81 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 140
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 141 IEWAVDSGIPVLVLLTKADKL--ASGARKAQLNMVREAVIAFNGDVQ-VEAFSSLKKTGV 197
Query: 183 RSLRTVLS 190
LR L
Sbjct: 198 DKLRIKLD 205
>gi|419959558|ref|ZP_14475610.1| GTP-binding protein YsxC [Enterobacter cloacae subsp. cloacae GS1]
gi|388605456|gb|EIM34674.1| GTP-binding protein YsxC [Enterobacter cloacae subsp. cloacae GS1]
Length = 209
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A ++ E++ A N VQ V SS G+
Sbjct: 130 IDWAVASDIAVLVLLTKADKL--ASGARKAQVNKVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|387789793|ref|YP_006254858.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Solitalea
canadensis DSM 3403]
gi|379652626|gb|AFD05682.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Solitalea
canadensis DSM 3403]
Length = 213
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + S P P LPE AF GRSNVGKSS++N LT + G+ +TS PG TQ IN F+
Sbjct: 7 EFVCSNTQVSKLPPPSLPEYAFIGRSNVGKSSLINMLTGKKGLAKTSQTPGKTQLINHFQ 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYGFA + + W + +++Y+S R +L+ V +L+D++ + D +
Sbjct: 67 INNNWFLVDLPGYGFARVSKTSAEKWGKFIRQYLSKRENLQCVMVLVDSRLEPQKIDLQF 126
Query: 125 ISLMERSQTKYQVVLTKTD 143
I + + +V TK+D
Sbjct: 127 IDSLGELGLPFVIVFTKSD 145
>gi|373450052|ref|ZP_09542127.1| putative GTP-binding protein (engB-like) [Wolbachia pipientis
wAlbB]
gi|371932745|emb|CCE77115.1| putative GTP-binding protein (engB-like) [Wolbachia pipientis
wAlbB]
Length = 197
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A S P PEIAFAGRSNVGKSS++N L R S KPG T+ INF+ +
Sbjct: 11 FIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSM 70
Query: 66 -GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
K +VDLPGYG++ A +E + L++ Y+ R +LKRV +LID+K G+K D +
Sbjct: 71 YNDKFRIVDLPGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSKVGLKEIDKDF 130
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
+ + + + +VLTK D V
Sbjct: 131 VYWLICNNINFNIVLTKIDKV 151
>gi|374997637|ref|YP_004973136.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus orientis DSM 765]
gi|357216003|gb|AET70621.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus orientis DSM 765]
Length = 199
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 4/191 (2%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K E+ A+A +P LPEIA AGRSNVGKSS++N+ + + RT + PG TQT+NF
Sbjct: 6 KAEYTASAVKYEQYPTDGLPEIAMAGRSNVGKSSLINSFLGRRNLARTGNTPGKTQTLNF 65
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+++ LVDLPGYG+A + V W +++ Y+ R L+ V ++D + D
Sbjct: 66 YRVNDAWFLVDLPGYGYAKVAKTVNAQWGPMMENYLKKREQLRAVIQIVDIRHAPSVEDR 125
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN-SLVQPVMMVSSKSGAG 181
E+ + Q VV TK D + + I + L+ + SL+ P SS+SG G
Sbjct: 126 EMHEWLRVKQVPTMVVATKADKIARGQWLKHLKVIAKDLEIPDVSLILP---FSSQSGVG 182
Query: 182 IRSLRTVLSKI 192
+ L + +I
Sbjct: 183 KKELNEAIEEI 193
>gi|449886596|ref|ZP_21786300.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SA41]
gi|449254048|gb|EMC51975.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SA41]
Length = 197
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
F +A S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ++NF+ +
Sbjct: 13 FLSAVNKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQSLNFYNID 72
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
KL VD+PGYG+A ++ + W ++++EY+++R +L+ V L+D + D ++
Sbjct: 73 DKLRFVDVPGYGYAKVSKKERAKWGKMIEEYLTSRENLRAVVSLVDFRHDPSSDDVQMYD 132
Query: 127 LMERSQTKYQVVLTKTDTV 145
++ + +V TK D V
Sbjct: 133 FLKYYEIPVILVATKADKV 151
>gi|422021522|ref|ZP_16368034.1| GTP-binding protein YsxC [Providencia sneebia DSM 19967]
gi|414099380|gb|EKT61023.1| GTP-binding protein YsxC [Providencia sneebia DSM 19967]
Length = 203
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F +A P E+AFAGRSN GKSS LNALT+Q G+ RTS PG TQ IN F+
Sbjct: 12 KFVISAPDIRHLPKDSGIEVAFAGRSNAGKSSALNALTQQKGLARTSKTPGRTQLINLFE 71
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A E++K W++ + EY+ R +K + +L+D + +K D ++
Sbjct: 72 VEDGIRLVDLPGYGYAEVPEDMKRKWQQALGEYLQKRECIKGLVILMDIRHPLKDLDMQM 131
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I + V+LTK D + ++ M++ ++L+ ++ V S+ GI
Sbjct: 132 IEWSVAMEVPVLVLLTKADKLASGARKKQLMEVRQTLEPLGGDIE-VEYFSALKKIGIDK 190
Query: 185 LRTVLS 190
LR L
Sbjct: 191 LRIKLD 196
>gi|407069593|ref|ZP_11100431.1| GTP-binding protein EngB [Vibrio cyclitrophicus ZF14]
Length = 219
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN +T Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D ++
Sbjct: 71 VTDGCHIVDLPGYGFAQVPLELKKKWQKSLGEYLQRRESLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRA--MQIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ QV+LTK D + AR+A ++I K+ V V + SS G G+
Sbjct: 131 IYWAIDSRIPVQVLLTKADKLKS--GARKAQLLKIRNDAKSFGGDV-AVDVFSSMKGIGV 187
Query: 183 RSLRTVLSK 191
LR + +
Sbjct: 188 DQLRAKMDE 196
>gi|420322607|ref|ZP_14824427.1| putative GTP-binding protein EngB [Shigella flexneri 2850-71]
gi|391245344|gb|EIQ04617.1| putative GTP-binding protein EngB [Shigella flexneri 2850-71]
Length = 210
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|336322813|ref|YP_004602780.1| GTP-binding protein engB [Flexistipes sinusarabici DSM 4947]
gi|336106394|gb|AEI14212.1| GTP-binding protein engB [Flexistipes sinusarabici DSM 4947]
Length = 197
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF +A + FP LPEIAF GRSNVGKSSM+NAL + +V+ + PG T+ INF
Sbjct: 2 KAEFITSAADTGGFPETSLPEIAFIGRSNVGKSSMINALLGRKKLVKVGNTPGKTKLINF 61
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + K VDLPGYG+A + + W L++ Y+ R LK L+ID + D
Sbjct: 62 FNIEDKYIFVDLPGYGYAKTSKAERKKWGRLIENYLKARKQLKACVLIIDIRRIPSGDDF 121
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP 170
+I + ++ + TK D V ++ + +I E+L V P
Sbjct: 122 LMIEWLSENEIPIILTATKKDKVSRNELDKHISKIAEALSVTADAVLP 169
>gi|322385236|ref|ZP_08058883.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
gi|417921721|ref|ZP_12565211.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
gi|321270860|gb|EFX53773.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
gi|342833606|gb|EGU67886.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRDNLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + VV TK D +
Sbjct: 129 YEFLKYYEIPVIVVATKADKI 149
>gi|86146594|ref|ZP_01064916.1| GTP-binding protein [Vibrio sp. MED222]
gi|85835651|gb|EAQ53787.1| GTP-binding protein [Vibrio sp. MED222]
Length = 219
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN +T Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D ++
Sbjct: 71 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRA--MQIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ QV+LTK D + AR+A ++I K+ V V + SS G G+
Sbjct: 131 IYWAIDSRIPVQVLLTKADKLKS--GARKAQLLKIRNDAKSFGGDV-AVDVFSSMKGIGV 187
Query: 183 RSLRTVLSK 191
LR + +
Sbjct: 188 DQLRAKMDE 196
>gi|225870477|ref|YP_002746424.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equi
subsp. equi 4047]
gi|254783210|sp|C0MA50.1|ENGB_STRE4 RecName: Full=Probable GTP-binding protein EngB
gi|225699881|emb|CAW93776.1| putative GTP-binding protein [Streptococcus equi subsp. equi 4047]
Length = 199
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 84/137 (61%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVD+PGYG+A + + W ++++EY++TR +L+ V L+D + D ++ +
Sbjct: 77 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHESSQDDIQMYEFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + +V TK D V
Sbjct: 137 KYYEIPVIIVATKADKV 153
>gi|417791949|ref|ZP_12439362.1| GTP-binding protein YsxC [Cronobacter sakazakii E899]
gi|449310240|ref|YP_007442596.1| GTP-binding protein YsxC [Cronobacter sakazakii SP291]
gi|333953934|gb|EGL71823.1| GTP-binding protein YsxC [Cronobacter sakazakii E899]
gi|449100273|gb|AGE88307.1| GTP-binding protein YsxC [Cronobacter sakazakii SP291]
Length = 211
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSGIPVLVLLTKADKL--ASGARKAQLNMVREAVIAFNGDVQ-VEAFSSLKKTGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRIKLD 194
>gi|309804144|ref|ZP_07698222.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 11V1-d]
gi|309807084|ref|ZP_07701063.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 03V1-b]
gi|309807950|ref|ZP_07701878.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 01V1-a]
gi|309809256|ref|ZP_07703125.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 2503V10-D]
gi|312873935|ref|ZP_07733971.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2052A-d]
gi|325911981|ref|ZP_08174383.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 143-D]
gi|349611375|ref|ZP_08890611.1| GTP-binding protein engB [Lactobacillus sp. 7_1_47FAA]
gi|308163727|gb|EFO65996.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 11V1-d]
gi|308166514|gb|EFO68714.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 03V1-b]
gi|308168801|gb|EFO70891.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 01V1-a]
gi|308170369|gb|EFO72393.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 2503V10-D]
gi|311090484|gb|EFQ48892.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2052A-d]
gi|325476166|gb|EGC79330.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 143-D]
gi|348608697|gb|EGY58667.1| GTP-binding protein engB [Lactobacillus sp. 7_1_47FAA]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 77/114 (67%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N +F +A +P DLPEIA +GRSNVGKSS++NA+ + + RTS +PG TQT+
Sbjct: 3 VNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTK 114
NF+ + T L VD+PGYG+A +E + + E++++Y+ TR LK + LL+D +
Sbjct: 63 NFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDAR 116
>gi|304311551|ref|YP_003811149.1| GTP-binding protein [gamma proteobacterium HdN1]
gi|301797284|emb|CBL45504.1| GTP-binding protein [gamma proteobacterium HdN1]
Length = 236
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+F +A S P + E+AFAGRSN GKSS +N +T+Q + RTS PG TQ +NFF
Sbjct: 42 QFLTSAAKLSQCPPDEGREVAFAGRSNAGKSSAINRITQQSKLARTSKTPGRTQLLNFFS 101
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A E +K W+ + EY+ RVSL V L++D + +KP D +
Sbjct: 102 VDDHKRLVDLPGYGYAEVPEALKVEWQRHLTEYLENRVSLVGVILIMDVRHPLKPFDQMM 161
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
+ Q ++LTK D + + +++ ++K+ + + V + S+ G+
Sbjct: 162 LDWARAYQFPLHILLTKADKLSRNAGQKSLAEVKRAIKSYSDV--SVQLFSTPESTGLVE 219
Query: 185 LRTVLSK 191
+ VL++
Sbjct: 220 AQGVLAR 226
>gi|56808898|ref|ZP_00366607.1| COG0218: Predicted GTPase [Streptococcus pyogenes M49 591]
gi|94988379|ref|YP_596480.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS9429]
gi|94992261|ref|YP_600360.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS2096]
gi|209559239|ref|YP_002285711.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes NZ131]
gi|417857101|ref|ZP_12502160.1| GTP-binding protein YsxC [Streptococcus pyogenes HKU QMH11M0907901]
gi|119369269|sp|Q1JC92.1|ENGB_STRPB RecName: Full=Probable GTP-binding protein EngB
gi|119369270|sp|Q1JM76.1|ENGB_STRPC RecName: Full=Probable GTP-binding protein EngB
gi|119369271|sp|Q1JHC1.1|ENGB_STRPD RecName: Full=Probable GTP-binding protein EngB
gi|238058988|sp|B5XL04.1|ENGB_STRPZ RecName: Full=Probable GTP-binding protein EngB
gi|94541887|gb|ABF31936.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS9429]
gi|94543767|gb|ABF33815.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10270]
gi|94545769|gb|ABF35816.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS2096]
gi|209540440|gb|ACI61016.1| GTP-binding protein EngB [Streptococcus pyogenes NZ131]
gi|387934056|gb|EIK42169.1| GTP-binding protein YsxC [Streptococcus pyogenes HKU QMH11M0907901]
Length = 199
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 82/137 (59%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY++TR +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 137 KYYDIPVIVVATKADKI 153
>gi|366158351|ref|ZP_09458213.1| GTP-binding protein YsxC [Escherichia sp. TW09308]
gi|432374189|ref|ZP_19617220.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE11]
gi|430893611|gb|ELC15935.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE11]
Length = 210
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVL 189
LR L
Sbjct: 187 DKLRQKL 193
>gi|117626138|ref|YP_859461.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli APEC
O1]
gi|227885401|ref|ZP_04003206.1| GTP-binding protein [Escherichia coli 83972]
gi|300976574|ref|ZP_07173524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
45-1]
gi|300985860|ref|ZP_07177624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
200-1]
gi|301046668|ref|ZP_07193797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
185-1]
gi|386631828|ref|YP_006151548.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i2']
gi|386636748|ref|YP_006156467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i14']
gi|386641515|ref|YP_006108313.1| GTP-binding protein [Escherichia coli ABU 83972]
gi|422356619|ref|ZP_16437299.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
110-3]
gi|422364494|ref|ZP_16445010.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
153-1]
gi|422367993|ref|ZP_16448413.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
16-3]
gi|422376113|ref|ZP_16456366.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
60-1]
gi|422381927|ref|ZP_16462090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
57-2]
gi|259645893|sp|A1AI47.1|ENGB_ECOK1 RecName: Full=Probable GTP-binding protein EngB
gi|115515262|gb|ABJ03337.1| putative GTP-binding protein [Escherichia coli APEC O1]
gi|227837659|gb|EEJ48125.1| GTP-binding protein [Escherichia coli 83972]
gi|300301380|gb|EFJ57765.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
185-1]
gi|300306499|gb|EFJ61019.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
200-1]
gi|300410032|gb|EFJ93570.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
45-1]
gi|307556007|gb|ADN48782.1| probable GTP-binding protein [Escherichia coli ABU 83972]
gi|315289565|gb|EFU48958.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
110-3]
gi|315292789|gb|EFU52141.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
153-1]
gi|315300260|gb|EFU59496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
16-3]
gi|324006859|gb|EGB76078.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
57-2]
gi|324012583|gb|EGB81802.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
60-1]
gi|355422727|gb|AER86924.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i2']
gi|355427647|gb|AER91843.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i14']
Length = 215
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 15 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 75 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 135 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 191
Query: 183 RSLRTVLS 190
LR L
Sbjct: 192 DKLRQKLD 199
>gi|145698334|ref|NP_418301.3| GTP-binding protein required for normal cell division [Escherichia
coli str. K-12 substr. MG1655]
gi|157156230|ref|YP_001465345.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E24377A]
gi|157163335|ref|YP_001460653.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli HS]
gi|161486045|ref|NP_756667.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CFT073]
gi|161950010|ref|YP_405310.2| ribosome biogenesis GTP-binding protein YsxC [Shigella dysenteriae
Sd197]
gi|161986408|ref|YP_312789.2| ribosome biogenesis GTP-binding protein YsxC [Shigella sonnei
Ss046]
gi|162138322|ref|YP_543397.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
UTI89]
gi|170022121|ref|YP_001727075.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC
8739]
gi|170683684|ref|YP_001746193.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
SMS-3-5]
gi|187732245|ref|YP_001882562.1| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii CDC
3083-94]
gi|188492392|ref|ZP_02999662.1| GTPase family protein [Escherichia coli 53638]
gi|191169445|ref|ZP_03031182.1| putative GTP-binding protein EngB [Escherichia coli B7A]
gi|191173902|ref|ZP_03035422.1| putative GTP-binding protein EngB [Escherichia coli F11]
gi|193063965|ref|ZP_03045051.1| putative GTP-binding protein EngB [Escherichia coli E22]
gi|193068077|ref|ZP_03049042.1| putative GTP-binding protein EngB [Escherichia coli E110019]
gi|215489198|ref|YP_002331629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O127:H6 str. E2348/69]
gi|222158572|ref|YP_002558711.1| GTP-binding protein engB [Escherichia coli LF82]
gi|237702894|ref|ZP_04533375.1| GTPase EngB [Escherichia sp. 3_2_53FAA]
gi|238902932|ref|YP_002928728.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
BW2952]
gi|253775500|ref|YP_003038331.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|260846367|ref|YP_003224145.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009]
gi|260857737|ref|YP_003231628.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O26:H11 str. 11368]
gi|260870581|ref|YP_003236983.1| GTP-binding protein [Escherichia coli O111:H- str. 11128]
gi|293407484|ref|ZP_06651403.1| GTP-binding protein engB [Escherichia coli FVEC1412]
gi|293413299|ref|ZP_06655960.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B354]
gi|293417325|ref|ZP_06659949.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B185]
gi|297517721|ref|ZP_06936107.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
OP50]
gi|298383227|ref|ZP_06992820.1| GTP-binding protein engB [Escherichia coli FVEC1302]
gi|301027904|ref|ZP_07191196.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
196-1]
gi|306813870|ref|ZP_07448046.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NC101]
gi|307314015|ref|ZP_07593629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W]
gi|309783772|ref|ZP_07678418.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|312969392|ref|ZP_07783594.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|331660414|ref|ZP_08361348.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA206]
gi|332282740|ref|ZP_08395153.1| GTPase EngB [Shigella sp. D9]
gi|378715225|ref|YP_005280118.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KO11FL]
gi|383181121|ref|YP_005459126.1| GTP-binding protein YsxC [Shigella sonnei 53G]
gi|386282475|ref|ZP_10060126.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
4_1_40B]
gi|386597611|ref|YP_006094011.1| GTP-binding protein HSR1-like protein [Escherichia coli DH1]
gi|386601907|ref|YP_006103413.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
IHE3034]
gi|386606457|ref|YP_006112757.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
UM146]
gi|386611233|ref|YP_006126719.1| GTP-binding protein [Escherichia coli W]
gi|386616685|ref|YP_006136351.1| hypothetical protein UMNK88_4695 [Escherichia coli UMNK88]
gi|386621501|ref|YP_006141081.1| GTP-binding protein EngB [Escherichia coli NA114]
gi|386626767|ref|YP_006146495.1| GTP-binding protein required for normal cell division [Escherichia
coli O7:K1 str. CE10]
gi|386711767|ref|YP_006175488.1| cell division protein; predicted checkpoint GTPase [Escherichia
coli W]
gi|387609666|ref|YP_006098522.1| GTP-binding protein [Escherichia coli 042]
gi|387619173|ref|YP_006122195.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O83:H1 str. NRG 857C]
gi|387623509|ref|YP_006131137.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli DH1]
gi|407466865|ref|YP_006786693.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484409|ref|YP_006781559.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484955|ref|YP_006772501.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414578746|ref|ZP_11435907.1| putative GTP-binding protein EngB [Shigella sonnei 3233-85]
gi|415786133|ref|ZP_11493379.1| hypothetical protein ECEPECA14_2976 [Escherichia coli EPECa14]
gi|415838360|ref|ZP_11520338.1| hypothetical protein ECRN5871_2081 [Escherichia coli RN587/1]
gi|416269220|ref|ZP_11642392.1| GTP-binding protein EngB [Shigella dysenteriae CDC 74-1112]
gi|416279849|ref|ZP_11644994.1| GTP-binding protein EngB [Shigella boydii ATCC 9905]
gi|416334846|ref|ZP_11671588.1| GTP-binding protein EngB [Escherichia coli WV_060327]
gi|416345288|ref|ZP_11678881.1| GTP-binding protein EngB [Escherichia coli EC4100B]
gi|416900468|ref|ZP_11929713.1| hypothetical protein ECSTEC7V_4574 [Escherichia coli STEC_7v]
gi|417087884|ref|ZP_11954703.1| hypothetical protein i01_05525 [Escherichia coli cloneA_i1]
gi|417117073|ref|ZP_11967934.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
1.2741]
gi|417121893|ref|ZP_11971266.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0246]
gi|417131675|ref|ZP_11976460.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0588]
gi|417157335|ref|ZP_11994959.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0497]
gi|417161138|ref|ZP_11997471.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0741]
gi|417175648|ref|ZP_12005444.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2608]
gi|417185543|ref|ZP_12010944.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0624]
gi|417201965|ref|ZP_12018215.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0522]
gi|417208241|ref|ZP_12020260.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
JB1-95]
gi|417221751|ref|ZP_12025191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.154]
gi|417227733|ref|ZP_12029491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0959]
gi|417241829|ref|ZP_12037586.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
9.0111]
gi|417250104|ref|ZP_12041888.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0967]
gi|417265189|ref|ZP_12052568.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.3916]
gi|417269399|ref|ZP_12056759.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.3884]
gi|417273185|ref|ZP_12060532.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.4168]
gi|417279337|ref|ZP_12066647.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2303]
gi|417281241|ref|ZP_12068541.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3003]
gi|417288015|ref|ZP_12075301.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07793]
gi|417293452|ref|ZP_12080731.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B41]
gi|417295702|ref|ZP_12082949.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
900105 (10e)]
gi|417583484|ref|ZP_12234281.1| hypothetical protein ECSTECB2F1_4211 [Escherichia coli STEC_B2F1]
gi|417589004|ref|ZP_12239764.1| hypothetical protein ECSTECC16502_4700 [Escherichia coli
STEC_C165-02]
gi|417594331|ref|ZP_12245017.1| hypothetical protein EC253486_4973 [Escherichia coli 2534-86]
gi|417604766|ref|ZP_12255327.1| hypothetical protein ECSTEC94C_4618 [Escherichia coli STEC_94C]
gi|417610621|ref|ZP_12261110.1| hypothetical protein ECSTECDG1313_5060 [Escherichia coli
STEC_DG131-3]
gi|417615525|ref|ZP_12265972.1| hypothetical protein ECSTECEH250_4634 [Escherichia coli STEC_EH250]
gi|417636819|ref|ZP_12287023.1| hypothetical protein ECSTECS1191_4797 [Escherichia coli STEC_S1191]
gi|417641883|ref|ZP_12292005.1| hypothetical protein ECTX1999_4616 [Escherichia coli TX1999]
gi|417669453|ref|ZP_12318988.1| hypothetical protein ECSTECO31_4316 [Escherichia coli STEC_O31]
gi|417674861|ref|ZP_12324291.1| hypothetical protein SD15574_4569 [Shigella dysenteriae 155-74]
gi|417714585|ref|ZP_12363538.1| hypothetical protein SFK272_4369 [Shigella flexneri K-272]
gi|417719504|ref|ZP_12368386.1| hypothetical protein SFK227_4300 [Shigella flexneri K-227]
gi|417758308|ref|ZP_12406367.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2B]
gi|417807550|ref|ZP_12454477.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. LB226692]
gi|417835289|ref|ZP_12481728.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 01-09591]
gi|417867767|ref|ZP_12512801.1| hypothetical protein C22711_4692 [Escherichia coli O104:H4 str.
C227-11]
gi|417944986|ref|ZP_12588224.1| GTP-binding protein YsxC [Escherichia coli XH140A]
gi|417976884|ref|ZP_12617674.1| GTP-binding protein YsxC [Escherichia coli XH001]
gi|418269934|ref|ZP_12888111.1| cell division protein putative checkpoint GTPase [Shigella sonnei
str. Moseley]
gi|418305491|ref|ZP_12917285.1| hypothetical protein UMNF18_4802 [Escherichia coli UMNF18]
gi|418943607|ref|ZP_13496779.1| GTP-binding protein YsxC [Escherichia coli O157:H43 str. T22]
gi|418999422|ref|ZP_13546996.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1A]
gi|419004686|ref|ZP_13552192.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1B]
gi|419010367|ref|ZP_13557773.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1C]
gi|419016071|ref|ZP_13563403.1| putative GTP-binding protein EngB [Escherichia coli DEC1D]
gi|419020996|ref|ZP_13568291.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1E]
gi|419026449|ref|ZP_13573659.1| putative GTP-binding protein EngB [Escherichia coli DEC2A]
gi|419031600|ref|ZP_13578737.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2C]
gi|419037249|ref|ZP_13584318.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2D]
gi|419042295|ref|ZP_13589308.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2E]
gi|419144970|ref|ZP_13689695.1| putative GTP-binding protein EngB [Escherichia coli DEC6A]
gi|419150872|ref|ZP_13695516.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6B]
gi|419156377|ref|ZP_13700929.1| putative GTP-binding protein EngB [Escherichia coli DEC6C]
gi|419161734|ref|ZP_13706222.1| putative GTP-binding protein EngB [Escherichia coli DEC6D]
gi|419166826|ref|ZP_13711272.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6E]
gi|419172820|ref|ZP_13716690.1| putative GTP-binding protein EngB [Escherichia coli DEC7A]
gi|419177613|ref|ZP_13721418.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7B]
gi|419183382|ref|ZP_13726986.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7C]
gi|419188996|ref|ZP_13732497.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7D]
gi|419193932|ref|ZP_13737369.1| putative GTP-binding protein EngB [Escherichia coli DEC7E]
gi|419199650|ref|ZP_13742936.1| putative GTP-binding protein EngB [Escherichia coli DEC8A]
gi|419206040|ref|ZP_13749192.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8B]
gi|419212386|ref|ZP_13755447.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8C]
gi|419218361|ref|ZP_13761346.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8D]
gi|419223965|ref|ZP_13766873.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8E]
gi|419229260|ref|ZP_13772096.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9A]
gi|419235138|ref|ZP_13777900.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9B]
gi|419240112|ref|ZP_13782816.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9C]
gi|419245963|ref|ZP_13788591.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9D]
gi|419251538|ref|ZP_13794103.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9E]
gi|419257345|ref|ZP_13799843.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10A]
gi|419263447|ref|ZP_13805853.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10B]
gi|419269446|ref|ZP_13811788.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10C]
gi|419274944|ref|ZP_13817230.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10D]
gi|419280387|ref|ZP_13822627.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10E]
gi|419286563|ref|ZP_13828723.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10F]
gi|419292078|ref|ZP_13834159.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11A]
gi|419297357|ref|ZP_13839390.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11B]
gi|419302949|ref|ZP_13844938.1| putative GTP-binding protein EngB [Escherichia coli DEC11C]
gi|419308894|ref|ZP_13850781.1| putative GTP-binding protein EngB [Escherichia coli DEC11D]
gi|419313859|ref|ZP_13855713.1| putative GTP-binding protein EngB [Escherichia coli DEC11E]
gi|419319358|ref|ZP_13861151.1| putative GTP-binding protein EngB [Escherichia coli DEC12A]
gi|419325303|ref|ZP_13866988.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12B]
gi|419331578|ref|ZP_13873168.1| putative GTP-binding protein EngB [Escherichia coli DEC12C]
gi|419336744|ref|ZP_13878257.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12D]
gi|419342446|ref|ZP_13883897.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12E]
gi|419347641|ref|ZP_13889006.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13A]
gi|419357578|ref|ZP_13898822.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13C]
gi|419362548|ref|ZP_13903752.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13D]
gi|419372411|ref|ZP_13913518.1| putative GTP-binding protein EngB [Escherichia coli DEC14A]
gi|419377991|ref|ZP_13919004.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14B]
gi|419383384|ref|ZP_13924322.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14C]
gi|419388620|ref|ZP_13929483.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14D]
gi|419393811|ref|ZP_13934610.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15A]
gi|419399257|ref|ZP_13940015.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15B]
gi|419409668|ref|ZP_13950348.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15D]
gi|419415226|ref|ZP_13955855.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15E]
gi|419702722|ref|ZP_14230309.1| GTP-binding protein YsxC [Escherichia coli SCI-07]
gi|419812010|ref|ZP_14336881.1| GTP-binding protein YsxC [Escherichia coli O32:H37 str. P4]
gi|419866527|ref|ZP_14388886.1| GTP-binding protein YsxC [Escherichia coli O103:H25 str. CVM9340]
gi|419871484|ref|ZP_14393540.1| GTP-binding protein YsxC [Escherichia coli O103:H2 str. CVM9450]
gi|419876841|ref|ZP_14398511.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9534]
gi|419879978|ref|ZP_14401395.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9545]
gi|419895922|ref|ZP_14415695.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9574]
gi|419904105|ref|ZP_14423112.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9942]
gi|419909426|ref|ZP_14428005.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O26:H11 str. CVM10026]
gi|419911929|ref|ZP_14430390.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD1]
gi|419921132|ref|ZP_14439227.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD2]
gi|419926188|ref|ZP_14443989.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-15]
gi|419927718|ref|ZP_14445451.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-1]
gi|419938066|ref|ZP_14454909.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 75]
gi|419944323|ref|ZP_14460827.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
HM605]
gi|419947805|ref|ZP_14464120.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CUMT8]
gi|420088855|ref|ZP_14600714.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9602]
gi|420097574|ref|ZP_14608870.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9634]
gi|420104969|ref|ZP_14615561.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9455]
gi|420111694|ref|ZP_14621517.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9553]
gi|420116412|ref|ZP_14625822.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10021]
gi|420122743|ref|ZP_14631653.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10030]
gi|420128757|ref|ZP_14637306.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10224]
gi|420134726|ref|ZP_14642828.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9952]
gi|420349800|ref|ZP_14851168.1| putative GTP-binding protein EngB [Shigella boydii 965-58]
gi|420361305|ref|ZP_14862245.1| putative GTP-binding protein EngB [Shigella sonnei 3226-85]
gi|420382723|ref|ZP_14882154.1| putative GTP-binding protein EngB [Shigella dysenteriae 225-75]
gi|421684780|ref|ZP_16124562.1| cell division protein putative checkpoint GTPase [Shigella flexneri
1485-80]
gi|421777455|ref|ZP_16214051.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AD30]
gi|422334908|ref|ZP_16415912.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4_1_47FAA]
gi|422751913|ref|ZP_16805819.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H252]
gi|422757342|ref|ZP_16811162.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H263]
gi|422764509|ref|ZP_16818258.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1167]
gi|422768943|ref|ZP_16822666.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1520]
gi|422773744|ref|ZP_16827426.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E482]
gi|422778621|ref|ZP_16832268.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H120]
gi|422784555|ref|ZP_16837334.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10509]
gi|422789070|ref|ZP_16841803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H489]
gi|422793705|ref|ZP_16846399.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA007]
gi|422803143|ref|ZP_16851633.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M863]
gi|422819010|ref|ZP_16867222.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M919]
gi|422832066|ref|ZP_16880191.1| GTP-binding protein engB [Escherichia coli B093]
gi|422841915|ref|ZP_16889883.1| GTP-binding protein engB [Escherichia coli H397]
gi|422963565|ref|ZP_16973179.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H494]
gi|422990125|ref|ZP_16980897.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C227-11]
gi|422997022|ref|ZP_16987784.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C236-11]
gi|423002118|ref|ZP_16992869.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 09-7901]
gi|423005773|ref|ZP_16996518.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 04-8351]
gi|423012334|ref|ZP_17003066.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-3677]
gi|423021565|ref|ZP_17012270.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4404]
gi|423026722|ref|ZP_17017416.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4522]
gi|423032550|ref|ZP_17023236.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4623]
gi|423035425|ref|ZP_17026101.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423040546|ref|ZP_17031214.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423047231|ref|ZP_17037889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423055769|ref|ZP_17044575.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423057773|ref|ZP_17046571.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423703381|ref|ZP_17677813.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H730]
gi|423708168|ref|ZP_17682548.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B799]
gi|424753468|ref|ZP_18181423.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424759276|ref|ZP_18186944.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424768924|ref|ZP_18196162.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425122207|ref|ZP_18523875.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0569]
gi|425285729|ref|ZP_18676740.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW00353]
gi|425307670|ref|ZP_18697332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli N1]
gi|425382206|ref|ZP_18766184.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1865]
gi|429721606|ref|ZP_19256519.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429773682|ref|ZP_19305694.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02030]
gi|429778866|ref|ZP_19310830.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429782701|ref|ZP_19314624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02092]
gi|429788094|ref|ZP_19319979.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02093]
gi|429794533|ref|ZP_19326372.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02281]
gi|429800493|ref|ZP_19332280.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02318]
gi|429804105|ref|ZP_19335860.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02913]
gi|429808753|ref|ZP_19340467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03439]
gi|429814695|ref|ZP_19346363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-04080]
gi|429819655|ref|ZP_19351283.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03943]
gi|429905974|ref|ZP_19371948.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429910108|ref|ZP_19376068.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429916007|ref|ZP_19381951.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429921056|ref|ZP_19386981.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429926862|ref|ZP_19392772.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429930793|ref|ZP_19396692.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429937335|ref|ZP_19403220.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429943014|ref|ZP_19408885.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429945694|ref|ZP_19411553.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429953258|ref|ZP_19419101.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429956602|ref|ZP_19422432.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432355895|ref|ZP_19599154.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE2]
gi|432360335|ref|ZP_19603545.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE4]
gi|432365135|ref|ZP_19608287.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE5]
gi|432379094|ref|ZP_19622074.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE12]
gi|432383778|ref|ZP_19626701.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE15]
gi|432384793|ref|ZP_19627700.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE16]
gi|432394530|ref|ZP_19637345.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE21]
gi|432395268|ref|ZP_19638065.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE25]
gi|432404260|ref|ZP_19647001.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE26]
gi|432408950|ref|ZP_19651650.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE28]
gi|432414175|ref|ZP_19656825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE39]
gi|432419383|ref|ZP_19661971.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE44]
gi|432424283|ref|ZP_19666818.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE178]
gi|432428527|ref|ZP_19671005.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE181]
gi|432434137|ref|ZP_19676556.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE187]
gi|432438838|ref|ZP_19681213.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE188]
gi|432443412|ref|ZP_19685742.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE189]
gi|432448555|ref|ZP_19690849.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE191]
gi|432459023|ref|ZP_19701195.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE201]
gi|432463228|ref|ZP_19705357.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE204]
gi|432468219|ref|ZP_19710294.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE205]
gi|432473233|ref|ZP_19715267.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE206]
gi|432478223|ref|ZP_19720206.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE208]
gi|432483273|ref|ZP_19725219.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE210]
gi|432487614|ref|ZP_19729520.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE212]
gi|432491695|ref|ZP_19733552.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE213]
gi|432493132|ref|ZP_19734960.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE214]
gi|432506773|ref|ZP_19748489.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE220]
gi|432516270|ref|ZP_19753483.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE224]
gi|432520076|ref|ZP_19757253.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE228]
gi|432526354|ref|ZP_19763464.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE230]
gi|432528716|ref|ZP_19765786.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE233]
gi|432531650|ref|ZP_19768671.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE234]
gi|432540244|ref|ZP_19777133.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE235]
gi|432545698|ref|ZP_19782519.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE236]
gi|432551176|ref|ZP_19787923.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE237]
gi|432556113|ref|ZP_19792826.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE47]
gi|432561149|ref|ZP_19797799.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE49]
gi|432566242|ref|ZP_19802796.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE51]
gi|432571155|ref|ZP_19807658.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE53]
gi|432576126|ref|ZP_19812592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE55]
gi|432578132|ref|ZP_19814576.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE56]
gi|432585408|ref|ZP_19821797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE57]
gi|432590335|ref|ZP_19826684.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE58]
gi|432595134|ref|ZP_19831442.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE60]
gi|432598704|ref|ZP_19834978.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE62]
gi|432604691|ref|ZP_19840916.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE66]
gi|432605318|ref|ZP_19841526.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE67]
gi|432613884|ref|ZP_19850039.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE72]
gi|432619181|ref|ZP_19855277.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE75]
gi|432624232|ref|ZP_19860243.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE76]
gi|432629481|ref|ZP_19865444.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE77]
gi|432633808|ref|ZP_19869723.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE80]
gi|432634763|ref|ZP_19870659.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE81]
gi|432643460|ref|ZP_19879279.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE83]
gi|432648552|ref|ZP_19884335.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE86]
gi|432653534|ref|ZP_19889270.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE87]
gi|432658117|ref|ZP_19893812.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE93]
gi|432663106|ref|ZP_19898733.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE111]
gi|432663582|ref|ZP_19899190.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE116]
gi|432672951|ref|ZP_19908467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE119]
gi|432677038|ref|ZP_19912477.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE142]
gi|432682656|ref|ZP_19918006.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE143]
gi|432687689|ref|ZP_19922975.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE156]
gi|432689187|ref|ZP_19924451.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE161]
gi|432701396|ref|ZP_19936538.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE169]
gi|432706591|ref|ZP_19941683.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE171]
gi|432708273|ref|ZP_19943347.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE6]
gi|432715738|ref|ZP_19950761.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE8]
gi|432716491|ref|ZP_19951503.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE9]
gi|432725346|ref|ZP_19960258.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE17]
gi|432729954|ref|ZP_19964825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE18]
gi|432734633|ref|ZP_19969453.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE45]
gi|432734905|ref|ZP_19969718.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE42]
gi|432743643|ref|ZP_19978355.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE23]
gi|432747855|ref|ZP_19982515.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE43]
gi|432752314|ref|ZP_19986890.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE29]
gi|432756838|ref|ZP_19991380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE22]
gi|432761718|ref|ZP_19996204.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE46]
gi|432762721|ref|ZP_19997181.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE48]
gi|432768237|ref|ZP_20002626.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE50]
gi|432772637|ref|ZP_20006946.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE54]
gi|432781043|ref|ZP_20015257.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE59]
gi|432781202|ref|ZP_20015411.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE63]
gi|432789907|ref|ZP_20024032.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE65]
gi|432795122|ref|ZP_20029192.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE78]
gi|432796633|ref|ZP_20030665.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE79]
gi|432799772|ref|ZP_20033772.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE84]
gi|432808105|ref|ZP_20042016.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE91]
gi|432811607|ref|ZP_20045461.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE101]
gi|432817651|ref|ZP_20051400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE115]
gi|432818671|ref|ZP_20052391.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE118]
gi|432824803|ref|ZP_20058465.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE123]
gi|432829477|ref|ZP_20063090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE135]
gi|432836871|ref|ZP_20070380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE136]
gi|432841720|ref|ZP_20075173.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE140]
gi|432847118|ref|ZP_20079612.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE141]
gi|432866922|ref|ZP_20089073.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE146]
gi|432878271|ref|ZP_20095681.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE154]
gi|432882610|ref|ZP_20098332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE158]
gi|432891501|ref|ZP_20104192.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE165]
gi|432901530|ref|ZP_20111549.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE192]
gi|432907726|ref|ZP_20116086.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE194]
gi|432915528|ref|ZP_20120783.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE190]
gi|432931656|ref|ZP_20131635.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE184]
gi|432940726|ref|ZP_20138600.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE183]
gi|432943552|ref|ZP_20140387.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE196]
gi|432951138|ref|ZP_20144858.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE197]
gi|432964713|ref|ZP_20153738.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE202]
gi|432965622|ref|ZP_20154543.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE203]
gi|432969456|ref|ZP_20158363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE207]
gi|432976104|ref|ZP_20164935.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE209]
gi|432987727|ref|ZP_20176436.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE215]
gi|432988375|ref|ZP_20177052.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE217]
gi|432993084|ref|ZP_20181714.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE218]
gi|433002281|ref|ZP_20190796.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE223]
gi|433002783|ref|ZP_20191290.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE227]
gi|433010083|ref|ZP_20198492.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE229]
gi|433016202|ref|ZP_20204524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE104]
gi|433021117|ref|ZP_20209191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE105]
gi|433025791|ref|ZP_20213754.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE106]
gi|433030823|ref|ZP_20218665.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE109]
gi|433040898|ref|ZP_20228481.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE113]
gi|433045394|ref|ZP_20232865.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE117]
gi|433050333|ref|ZP_20237649.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE120]
gi|433055491|ref|ZP_20242641.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE122]
gi|433060406|ref|ZP_20247434.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE124]
gi|433065333|ref|ZP_20252232.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE125]
gi|433070227|ref|ZP_20256986.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE128]
gi|433075167|ref|ZP_20261798.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE129]
gi|433080092|ref|ZP_20266605.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE131]
gi|433084809|ref|ZP_20271251.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE133]
gi|433089611|ref|ZP_20275965.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE137]
gi|433094255|ref|ZP_20280501.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE138]
gi|433103480|ref|ZP_20289546.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE145]
gi|433113156|ref|ZP_20299001.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE150]
gi|433117814|ref|ZP_20303590.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE153]
gi|433122498|ref|ZP_20308150.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE157]
gi|433127516|ref|ZP_20313053.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE160]
gi|433132439|ref|ZP_20317857.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE163]
gi|433137111|ref|ZP_20322432.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE166]
gi|433141589|ref|ZP_20326823.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE167]
gi|433146519|ref|ZP_20331646.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE168]
gi|433151541|ref|ZP_20336534.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE174]
gi|433156074|ref|ZP_20340995.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE176]
gi|433161017|ref|ZP_20345829.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE177]
gi|433165901|ref|ZP_20350622.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE179]
gi|433170896|ref|ZP_20355508.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE180]
gi|433175751|ref|ZP_20360252.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE232]
gi|433180736|ref|ZP_20365105.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE82]
gi|433185624|ref|ZP_20369854.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE85]
gi|433190688|ref|ZP_20374771.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE88]
gi|433195917|ref|ZP_20379881.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE90]
gi|433200645|ref|ZP_20384524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE94]
gi|433205617|ref|ZP_20389356.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE95]
gi|433210034|ref|ZP_20393693.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE97]
gi|433214913|ref|ZP_20398483.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE99]
gi|442595827|ref|ZP_21013663.1| GTP-binding protein EngB [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442598567|ref|ZP_21016327.1| GTP-binding protein EngB [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442607183|ref|ZP_21021972.1| GTP-binding protein EngB [Escherichia coli Nissle 1917]
gi|443615340|ref|YP_007379196.1| GTP-binding protein YsxC [Escherichia coli APEC O78]
gi|450227602|ref|ZP_21897575.1| GTP-binding protein YsxC [Escherichia coli O08]
gi|450253060|ref|ZP_21902333.1| GTP-binding protein YsxC [Escherichia coli S17]
gi|67462332|sp|P0A6P7.1|ENGB_ECOLI RecName: Full=Probable GTP-binding protein EngB
gi|67462333|sp|P0A6P8.1|ENGB_ECOL6 RecName: Full=Probable GTP-binding protein EngB
gi|119369193|sp|Q1R448.2|ENGB_ECOUT RecName: Full=Probable GTP-binding protein EngB
gi|119369257|sp|Q32A36.2|ENGB_SHIDS RecName: Full=Probable GTP-binding protein EngB
gi|119369259|sp|Q3YVA8.2|ENGB_SHISS RecName: Full=Probable GTP-binding protein EngB
gi|166920110|sp|A7ZU66.1|ENGB_ECO24 RecName: Full=Probable GTP-binding protein EngB
gi|166920111|sp|A8A6W6.1|ENGB_ECOHS RecName: Full=Probable GTP-binding protein EngB
gi|189037177|sp|B1IW48.1|ENGB_ECOLC RecName: Full=Probable GTP-binding protein EngB
gi|226741188|sp|B1LMP7.1|ENGB_ECOSM RecName: Full=Probable GTP-binding protein EngB
gi|238691700|sp|B2TVL1.1|ENGB_SHIB3 RecName: Full=Probable GTP-binding protein EngB
gi|254783196|sp|B7UNI7.1|ENGB_ECO27 RecName: Full=Probable GTP-binding protein EngB
gi|259645892|sp|C5A033.1|ENGB_ECOBW RecName: Full=Probable GTP-binding protein EngB
gi|33358154|pdb|1PUI|A Chain A, Structure Of Engb Gtpase
gi|33358155|pdb|1PUI|B Chain B, Structure Of Engb Gtpase
gi|145693205|gb|AAC76862.3| GTP-binding protein required for normal cell division [Escherichia
coli str. K-12 substr. MG1655]
gi|157069015|gb|ABV08270.1| putative GTP-binding protein EngB [Escherichia coli HS]
gi|157078260|gb|ABV17968.1| putative GTP-binding protein EngB [Escherichia coli E24377A]
gi|169757049|gb|ACA79748.1| GTP-binding protein HSR1-related [Escherichia coli ATCC 8739]
gi|170521402|gb|ACB19580.1| putative GTP-binding protein EngB [Escherichia coli SMS-3-5]
gi|187429237|gb|ACD08511.1| putative GTP-binding protein EngB [Shigella boydii CDC 3083-94]
gi|188487591|gb|EDU62694.1| GTPase family protein [Escherichia coli 53638]
gi|190900513|gb|EDV60325.1| putative GTP-binding protein EngB [Escherichia coli B7A]
gi|190905860|gb|EDV65479.1| putative GTP-binding protein EngB [Escherichia coli F11]
gi|192929430|gb|EDV83038.1| putative GTP-binding protein EngB [Escherichia coli E22]
gi|192958697|gb|EDV89135.1| putative GTP-binding protein EngB [Escherichia coli E110019]
gi|215267270|emb|CAS11719.1| GTP-binding protein [Escherichia coli O127:H6 str. E2348/69]
gi|222035577|emb|CAP78322.1| GTP-binding protein engB [Escherichia coli LF82]
gi|226902831|gb|EEH89090.1| GTPase EngB [Escherichia sp. 3_2_53FAA]
gi|238861392|gb|ACR63390.1| GTP-binding protein [Escherichia coli BW2952]
gi|253326544|gb|ACT31146.1| GTP-binding protein HSR1-related [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|257756386|dbj|BAI27888.1| GTP-binding protein [Escherichia coli O26:H11 str. 11368]
gi|257761514|dbj|BAI33011.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009]
gi|257766937|dbj|BAI38432.1| GTP-binding protein [Escherichia coli O111:H- str. 11128]
gi|260451300|gb|ACX41722.1| GTP-binding protein HSR1-related protein [Escherichia coli DH1]
gi|284923966|emb|CBG37065.1| probable GTP-binding protein [Escherichia coli 042]
gi|291425401|gb|EFE98440.1| GTP-binding protein engB [Escherichia coli FVEC1412]
gi|291430845|gb|EFF03841.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B185]
gi|291468047|gb|EFF10545.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B354]
gi|294490765|gb|ADE89521.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
IHE3034]
gi|298276261|gb|EFI17781.1| GTP-binding protein engB [Escherichia coli FVEC1302]
gi|299878997|gb|EFI87208.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
196-1]
gi|305852868|gb|EFM53315.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NC101]
gi|306906332|gb|EFN36848.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W]
gi|307628941|gb|ADN73245.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
UM146]
gi|308928355|gb|EFP73816.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|312285939|gb|EFR13857.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312948434|gb|ADR29261.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O83:H1 str. NRG 857C]
gi|315063150|gb|ADT77477.1| GTP-binding protein [Escherichia coli W]
gi|315138433|dbj|BAJ45592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli DH1]
gi|320174863|gb|EFW49984.1| GTP-binding protein EngB [Shigella dysenteriae CDC 74-1112]
gi|320182136|gb|EFW57039.1| GTP-binding protein EngB [Shigella boydii ATCC 9905]
gi|320196912|gb|EFW71534.1| GTP-binding protein EngB [Escherichia coli WV_060327]
gi|320198936|gb|EFW73534.1| GTP-binding protein EngB [Escherichia coli EC4100B]
gi|323155159|gb|EFZ41346.1| hypothetical protein ECEPECA14_2976 [Escherichia coli EPECa14]
gi|323189711|gb|EFZ74990.1| hypothetical protein ECRN5871_2081 [Escherichia coli RN587/1]
gi|323380786|gb|ADX53054.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KO11FL]
gi|323934351|gb|EGB30764.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1520]
gi|323939085|gb|EGB35301.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E482]
gi|323943760|gb|EGB39857.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H120]
gi|323949359|gb|EGB45248.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H252]
gi|323954360|gb|EGB50145.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H263]
gi|323959368|gb|EGB55029.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H489]
gi|323964212|gb|EGB59695.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M863]
gi|323969731|gb|EGB65014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA007]
gi|323974267|gb|EGB69396.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10509]
gi|324115641|gb|EGC09579.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1167]
gi|327250492|gb|EGE62200.1| hypothetical protein ECSTEC7V_4574 [Escherichia coli STEC_7v]
gi|331052363|gb|EGI24400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA206]
gi|332085127|gb|EGI90305.1| hypothetical protein SD15574_4569 [Shigella dysenteriae 155-74]
gi|332105092|gb|EGJ08438.1| GTPase EngB [Shigella sp. D9]
gi|332345854|gb|AEE59188.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332998505|gb|EGK18103.1| hypothetical protein SFK272_4369 [Shigella flexneri K-272]
gi|333014000|gb|EGK33361.1| hypothetical protein SFK227_4300 [Shigella flexneri K-227]
gi|333972002|gb|AEG38807.1| GTP-binding protein EngB [Escherichia coli NA114]
gi|339417589|gb|AEJ59261.1| hypothetical protein UMNF18_4802 [Escherichia coli UMNF18]
gi|340731869|gb|EGR61008.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 01-09591]
gi|340737808|gb|EGR72062.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. LB226692]
gi|341921056|gb|EGT70659.1| hypothetical protein C22711_4692 [Escherichia coli O104:H4 str.
C227-11]
gi|342363369|gb|EGU27478.1| GTP-binding protein YsxC [Escherichia coli XH140A]
gi|344193568|gb|EGV47648.1| GTP-binding protein YsxC [Escherichia coli XH001]
gi|345330626|gb|EGW63091.1| hypothetical protein ECSTECC16502_4700 [Escherichia coli
STEC_C165-02]
gi|345331438|gb|EGW63898.1| hypothetical protein EC253486_4973 [Escherichia coli 2534-86]
gi|345333510|gb|EGW65960.1| hypothetical protein ECSTECB2F1_4211 [Escherichia coli STEC_B2F1]
gi|345346871|gb|EGW79188.1| hypothetical protein ECSTEC94C_4618 [Escherichia coli STEC_94C]
gi|345352993|gb|EGW85230.1| hypothetical protein ECSTECDG1313_5060 [Escherichia coli
STEC_DG131-3]
gi|345357421|gb|EGW89616.1| hypothetical protein ECSTECEH250_4634 [Escherichia coli STEC_EH250]
gi|345384640|gb|EGX14501.1| hypothetical protein ECSTECS1191_4797 [Escherichia coli STEC_S1191]
gi|345389400|gb|EGX19205.1| hypothetical protein ECTX1999_4616 [Escherichia coli TX1999]
gi|349740503|gb|AEQ15209.1| GTP-binding protein required for normal cell division [Escherichia
coli O7:K1 str. CE10]
gi|354856875|gb|EHF17332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C236-11]
gi|354861192|gb|EHF21632.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C227-11]
gi|354861484|gb|EHF21923.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 04-8351]
gi|354869898|gb|EHF30304.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 09-7901]
gi|354875827|gb|EHF36190.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-3677]
gi|354885106|gb|EHF45414.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4404]
gi|354888415|gb|EHF48672.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4522]
gi|354891933|gb|EHF52149.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4623]
gi|354903966|gb|EHF64062.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354907493|gb|EHF67553.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354909500|gb|EHF69531.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354911777|gb|EHF71780.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|354919966|gb|EHF79903.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|355349372|gb|EHF98578.1| hypothetical protein i01_05525 [Escherichia coli cloneA_i1]
gi|371591669|gb|EHN80612.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H494]
gi|371603612|gb|EHN92263.1| GTP-binding protein engB [Escherichia coli H397]
gi|371615785|gb|EHO04171.1| GTP-binding protein engB [Escherichia coli B093]
gi|373244190|gb|EHP63680.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4_1_47FAA]
gi|375321087|gb|EHS66960.1| GTP-binding protein YsxC [Escherichia coli O157:H43 str. T22]
gi|377838665|gb|EHU03775.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1C]
gi|377838794|gb|EHU03903.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1A]
gi|377841513|gb|EHU06578.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1B]
gi|377852589|gb|EHU17505.1| putative GTP-binding protein EngB [Escherichia coli DEC1D]
gi|377855680|gb|EHU20545.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1E]
gi|377857528|gb|EHU22377.1| putative GTP-binding protein EngB [Escherichia coli DEC2A]
gi|377870017|gb|EHU34711.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2B]
gi|377871997|gb|EHU36651.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2C]
gi|377873577|gb|EHU38210.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2D]
gi|377885556|gb|EHU50050.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2E]
gi|377988162|gb|EHV51341.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6B]
gi|377988820|gb|EHV51991.1| putative GTP-binding protein EngB [Escherichia coli DEC6A]
gi|377991820|gb|EHV54969.1| putative GTP-binding protein EngB [Escherichia coli DEC6C]
gi|378003447|gb|EHV66489.1| putative GTP-binding protein EngB [Escherichia coli DEC6D]
gi|378005957|gb|EHV68948.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6E]
gi|378009937|gb|EHV72885.1| putative GTP-binding protein EngB [Escherichia coli DEC7A]
gi|378020778|gb|EHV83510.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7C]
gi|378023770|gb|EHV86439.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7D]
gi|378028309|gb|EHV90928.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7B]
gi|378034353|gb|EHV96918.1| putative GTP-binding protein EngB [Escherichia coli DEC7E]
gi|378042603|gb|EHW05050.1| putative GTP-binding protein EngB [Escherichia coli DEC8A]
gi|378043097|gb|EHW05535.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8B]
gi|378047858|gb|EHW10215.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8C]
gi|378057008|gb|EHW19244.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8D]
gi|378060498|gb|EHW22688.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8E]
gi|378068591|gb|EHW30689.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9A]
gi|378073042|gb|EHW35096.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9B]
gi|378079924|gb|EHW41892.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9C]
gi|378086301|gb|EHW48179.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9D]
gi|378089640|gb|EHW51482.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9E]
gi|378097210|gb|EHW58969.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10A]
gi|378102609|gb|EHW64285.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10B]
gi|378107217|gb|EHW68839.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10C]
gi|378113226|gb|EHW74797.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10D]
gi|378124346|gb|EHW85755.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10E]
gi|378124370|gb|EHW85778.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11A]
gi|378125459|gb|EHW86859.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10F]
gi|378137845|gb|EHW99107.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11B]
gi|378143860|gb|EHX05041.1| putative GTP-binding protein EngB [Escherichia coli DEC11D]
gi|378145659|gb|EHX06816.1| putative GTP-binding protein EngB [Escherichia coli DEC11C]
gi|378154414|gb|EHX15488.1| putative GTP-binding protein EngB [Escherichia coli DEC11E]
gi|378161848|gb|EHX22822.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12B]
gi|378164382|gb|EHX25327.1| putative GTP-binding protein EngB [Escherichia coli DEC12A]
gi|378165177|gb|EHX26114.1| putative GTP-binding protein EngB [Escherichia coli DEC12C]
gi|378179476|gb|EHX40202.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12D]
gi|378182040|gb|EHX42695.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13A]
gi|378182121|gb|EHX42775.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12E]
gi|378195298|gb|EHX55797.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13C]
gi|378197870|gb|EHX58345.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13D]
gi|378212871|gb|EHX73191.1| putative GTP-binding protein EngB [Escherichia coli DEC14A]
gi|378214581|gb|EHX74887.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14B]
gi|378223866|gb|EHX84076.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14C]
gi|378227516|gb|EHX87687.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14D]
gi|378234202|gb|EHX94281.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15A]
gi|378239750|gb|EHX99729.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15B]
gi|378250298|gb|EHY10203.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15D]
gi|378254983|gb|EHY14842.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15E]
gi|380346092|gb|EIA34393.1| GTP-binding protein YsxC [Escherichia coli SCI-07]
gi|383407459|gb|AFH13702.1| cell division protein; predicted checkpoint GTPase [Escherichia
coli W]
gi|385155229|gb|EIF17234.1| GTP-binding protein YsxC [Escherichia coli O32:H37 str. P4]
gi|385537438|gb|EIF84310.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M919]
gi|385708229|gb|EIG45243.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H730]
gi|385709081|gb|EIG46083.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B799]
gi|386120524|gb|EIG69150.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
4_1_40B]
gi|386139617|gb|EIG80772.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
1.2741]
gi|386147968|gb|EIG94407.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0246]
gi|386149529|gb|EIH00818.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0588]
gi|386166085|gb|EIH32605.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0497]
gi|386174277|gb|EIH46277.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0741]
gi|386178340|gb|EIH55819.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2608]
gi|386182843|gb|EIH65599.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0624]
gi|386186852|gb|EIH75675.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0522]
gi|386196781|gb|EIH90994.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
JB1-95]
gi|386201553|gb|EII00544.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.154]
gi|386207068|gb|EII11573.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0959]
gi|386211946|gb|EII22397.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
9.0111]
gi|386220425|gb|EII36889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0967]
gi|386221371|gb|EII43815.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.3916]
gi|386228204|gb|EII55560.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.3884]
gi|386234362|gb|EII66340.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.4168]
gi|386238114|gb|EII75054.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2303]
gi|386245570|gb|EII87300.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3003]
gi|386248800|gb|EII94972.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07793]
gi|386251640|gb|EIJ01332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B41]
gi|386259146|gb|EIJ14620.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
900105 (10e)]
gi|388334862|gb|EIL01443.1| GTP-binding protein YsxC [Escherichia coli O103:H25 str. CVM9340]
gi|388337026|gb|EIL03542.1| GTP-binding protein YsxC [Escherichia coli O103:H2 str. CVM9450]
gi|388342245|gb|EIL08292.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9534]
gi|388359646|gb|EIL23933.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9574]
gi|388368260|gb|EIL31902.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9942]
gi|388370215|gb|EIL33755.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9545]
gi|388373168|gb|EIL36502.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O26:H11 str. CVM10026]
gi|388383195|gb|EIL44982.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD2]
gi|388383728|gb|EIL45477.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-15]
gi|388392440|gb|EIL53858.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD1]
gi|388406871|gb|EIL67253.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-1]
gi|388410989|gb|EIL71182.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 75]
gi|388419204|gb|EIL78952.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
HM605]
gi|388422497|gb|EIL82075.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CUMT8]
gi|391264994|gb|EIQ23972.1| putative GTP-binding protein EngB [Shigella boydii 965-58]
gi|391277165|gb|EIQ35916.1| putative GTP-binding protein EngB [Shigella sonnei 3226-85]
gi|391280362|gb|EIQ39034.1| putative GTP-binding protein EngB [Shigella sonnei 3233-85]
gi|391298110|gb|EIQ56131.1| putative GTP-binding protein EngB [Shigella dysenteriae 225-75]
gi|394383853|gb|EJE61436.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9634]
gi|394384725|gb|EJE62280.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10224]
gi|394389342|gb|EJE66488.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9602]
gi|394397972|gb|EJE74194.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9553]
gi|394400821|gb|EJE76713.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9455]
gi|394403735|gb|EJE79274.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10021]
gi|394418395|gb|EJE92071.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10030]
gi|394421115|gb|EJE94604.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9952]
gi|397782930|gb|EJK93793.1| hypothetical protein ECSTECO31_4316 [Escherichia coli STEC_O31]
gi|397894966|gb|EJL11402.1| cell division protein putative checkpoint GTPase [Shigella sonnei
str. Moseley]
gi|404335842|gb|EJZ62310.1| cell division protein putative checkpoint GTPase [Shigella flexneri
1485-80]
gi|406780117|gb|AFS59541.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056706|gb|AFS76757.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 2011C-3493]
gi|407062900|gb|AFS83947.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197635|gb|EKI22889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW00353]
gi|408224837|gb|EKI48539.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli N1]
gi|408293000|gb|EKJ11470.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1865]
gi|408457553|gb|EKJ81348.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AD30]
gi|408563868|gb|EKK39989.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0569]
gi|421935240|gb|EKT92933.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421944848|gb|EKU02088.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421947454|gb|EKU04528.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str.
CFSAN001630]
gi|429354860|gb|EKY91555.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02030]
gi|429355602|gb|EKY92289.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429356433|gb|EKY93109.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02092]
gi|429370602|gb|EKZ07166.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02093]
gi|429371062|gb|EKZ07622.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02281]
gi|429375285|gb|EKZ11822.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02318]
gi|429386723|gb|EKZ23169.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02913]
gi|429389100|gb|EKZ25522.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03439]
gi|429390209|gb|EKZ26624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03943]
gi|429399769|gb|EKZ36088.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-04080]
gi|429401696|gb|EKZ37993.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429404299|gb|EKZ40576.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429412556|gb|EKZ48749.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429415276|gb|EKZ51442.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429422792|gb|EKZ58903.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429427373|gb|EKZ63457.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429431633|gb|EKZ67679.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429437904|gb|EKZ73899.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429442253|gb|EKZ78211.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429447424|gb|EKZ83343.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429454112|gb|EKZ89977.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429458403|gb|EKZ94228.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430871725|gb|ELB95352.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE2]
gi|430872617|gb|ELB96215.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE4]
gi|430882793|gb|ELC05863.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE5]
gi|430895603|gb|ELC17865.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE12]
gi|430902780|gb|ELC24584.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE15]
gi|430911745|gb|ELC33014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE16]
gi|430913384|gb|ELC34506.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE21]
gi|430920119|gb|ELC41029.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE25]
gi|430922334|gb|ELC43090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE26]
gi|430925758|gb|ELC46360.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE28]
gi|430932135|gb|ELC52568.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE39]
gi|430935616|gb|ELC55916.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE44]
gi|430941336|gb|ELC61489.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE178]
gi|430949674|gb|ELC69101.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE187]
gi|430950050|gb|ELC69441.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE181]
gi|430959558|gb|ELC77875.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE188]
gi|430961856|gb|ELC79855.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE189]
gi|430970240|gb|ELC87312.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE191]
gi|430978835|gb|ELC95629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE201]
gi|430984933|gb|ELD01543.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE204]
gi|430990376|gb|ELD06811.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE205]
gi|430994986|gb|ELD11294.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE206]
gi|431001524|gb|ELD17105.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE208]
gi|431003009|gb|ELD18496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE210]
gi|431013446|gb|ELD27179.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE212]
gi|431016942|gb|ELD30461.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE213]
gi|431030756|gb|ELD43762.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE214]
gi|431034508|gb|ELD46439.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE220]
gi|431037753|gb|ELD48728.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE224]
gi|431047138|gb|ELD57144.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE230]
gi|431047188|gb|ELD57193.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE228]
gi|431059831|gb|ELD69178.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE233]
gi|431066392|gb|ELD75021.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE235]
gi|431066734|gb|ELD75357.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE234]
gi|431070212|gb|ELD78518.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE236]
gi|431075322|gb|ELD82844.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE237]
gi|431080074|gb|ELD86880.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE47]
gi|431088067|gb|ELD93972.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE49]
gi|431089337|gb|ELD95156.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE51]
gi|431096779|gb|ELE02239.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE53]
gi|431104028|gb|ELE08635.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE55]
gi|431111218|gb|ELE15123.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE56]
gi|431114040|gb|ELE17594.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE57]
gi|431117252|gb|ELE20514.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE58]
gi|431125391|gb|ELE27806.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE60]
gi|431130217|gb|ELE32326.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE62]
gi|431136421|gb|ELE38289.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE66]
gi|431143843|gb|ELE45557.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE67]
gi|431145806|gb|ELE47411.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE72]
gi|431150113|gb|ELE51170.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE75]
gi|431155379|gb|ELE56135.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE76]
gi|431159910|gb|ELE60453.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE77]
gi|431166623|gb|ELE66930.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE80]
gi|431175769|gb|ELE75759.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE81]
gi|431176615|gb|ELE76558.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE83]
gi|431177262|gb|ELE77194.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE86]
gi|431186651|gb|ELE86191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE87]
gi|431187166|gb|ELE86679.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE93]
gi|431196546|gb|ELE95472.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE111]
gi|431206195|gb|ELF04620.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE116]
gi|431207065|gb|ELF05373.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE119]
gi|431209704|gb|ELF07775.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE142]
gi|431216928|gb|ELF14520.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE143]
gi|431218791|gb|ELF16223.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE156]
gi|431234212|gb|ELF29619.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE161]
gi|431239484|gb|ELF33961.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE169]
gi|431239776|gb|ELF34246.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE171]
gi|431251140|gb|ELF45158.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE8]
gi|431254717|gb|ELF47985.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE6]
gi|431261653|gb|ELF53678.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE17]
gi|431269613|gb|ELF60919.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE9]
gi|431270347|gb|ELF61513.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE45]
gi|431270397|gb|ELF61562.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE18]
gi|431280672|gb|ELF71587.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE23]
gi|431289006|gb|ELF79753.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE43]
gi|431289833|gb|ELF80564.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE42]
gi|431293244|gb|ELF83624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE29]
gi|431299082|gb|ELF88658.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE22]
gi|431304984|gb|ELF93507.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE46]
gi|431315052|gb|ELG02980.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE48]
gi|431321501|gb|ELG09102.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE50]
gi|431323059|gb|ELG10612.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE54]
gi|431323664|gb|ELG11136.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE59]
gi|431333919|gb|ELG21095.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE63]
gi|431334502|gb|ELG21660.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE65]
gi|431335079|gb|ELG22221.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE78]
gi|431347591|gb|ELG34474.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE79]
gi|431352274|gb|ELG39052.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE91]
gi|431353977|gb|ELG40728.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE84]
gi|431359459|gb|ELG46096.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE101]
gi|431359694|gb|ELG46320.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE115]
gi|431373039|gb|ELG58699.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE118]
gi|431377161|gb|ELG62294.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE123]
gi|431380855|gb|ELG65491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE136]
gi|431381790|gb|ELG66141.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE135]
gi|431384772|gb|ELG68774.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE140]
gi|431391753|gb|ELG75359.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE141]
gi|431400648|gb|ELG84015.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE146]
gi|431417055|gb|ELG99525.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE154]
gi|431421283|gb|ELH03496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE192]
gi|431422952|gb|ELH05082.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE158]
gi|431425855|gb|ELH07901.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE194]
gi|431429603|gb|ELH11528.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE165]
gi|431435130|gb|ELH16743.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE190]
gi|431458842|gb|ELH39161.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE184]
gi|431459418|gb|ELH39712.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE183]
gi|431466771|gb|ELH46788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE196]
gi|431467010|gb|ELH47022.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE202]
gi|431476198|gb|ELH55992.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE203]
gi|431477122|gb|ELH56893.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE197]
gi|431485238|gb|ELH64902.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE209]
gi|431489980|gb|ELH69603.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE207]
gi|431493007|gb|ELH72602.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE215]
gi|431501568|gb|ELH80547.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE217]
gi|431503844|gb|ELH82578.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE223]
gi|431513853|gb|ELH91932.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE218]
gi|431520620|gb|ELH97941.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE229]
gi|431521363|gb|ELH98609.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE227]
gi|431525714|gb|ELI02495.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE104]
gi|431526283|gb|ELI03040.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE105]
gi|431529958|gb|ELI06648.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE106]
gi|431539829|gb|ELI15467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE109]
gi|431547608|gb|ELI21904.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE113]
gi|431551891|gb|ELI25855.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE117]
gi|431561431|gb|ELI34801.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE120]
gi|431565151|gb|ELI38293.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE122]
gi|431565349|gb|ELI38482.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE124]
gi|431577390|gb|ELI50025.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE125]
gi|431578257|gb|ELI50868.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE128]
gi|431582030|gb|ELI54466.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE129]
gi|431592628|gb|ELI63198.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE131]
gi|431597105|gb|ELI67018.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE133]
gi|431600134|gb|ELI69810.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE137]
gi|431606369|gb|ELI75746.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE138]
gi|431615558|gb|ELI84686.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE145]
gi|431624099|gb|ELI92721.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE150]
gi|431630021|gb|ELI98363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE153]
gi|431638294|gb|ELJ06332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE157]
gi|431639520|gb|ELJ07376.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE160]
gi|431641857|gb|ELJ09590.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE163]
gi|431652855|gb|ELJ19975.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE166]
gi|431655071|gb|ELJ22112.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE167]
gi|431656829|gb|ELJ23803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE168]
gi|431666578|gb|ELJ33206.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE174]
gi|431669353|gb|ELJ35777.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE176]
gi|431672918|gb|ELJ39151.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE177]
gi|431682918|gb|ELJ48563.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE179]
gi|431683318|gb|ELJ48955.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE180]
gi|431686991|gb|ELJ52544.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE232]
gi|431697509|gb|ELJ62618.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE82]
gi|431701093|gb|ELJ66014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE85]
gi|431701148|gb|ELJ66068.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE88]
gi|431712801|gb|ELJ77078.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE90]
gi|431715345|gb|ELJ79510.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE95]
gi|431716481|gb|ELJ80593.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE94]
gi|431727835|gb|ELJ91570.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE97]
gi|431731157|gb|ELJ94667.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE99]
gi|441603989|emb|CCP98797.1| GTP-binding protein EngB [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441652784|emb|CCQ04102.1| GTP-binding protein EngB [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441711642|emb|CCQ07949.1| GTP-binding protein EngB [Escherichia coli Nissle 1917]
gi|443419848|gb|AGC84752.1| GTP-binding protein YsxC [Escherichia coli APEC O78]
gi|449313461|gb|EMD03670.1| GTP-binding protein YsxC [Escherichia coli O08]
gi|449314086|gb|EMD04265.1| GTP-binding protein YsxC [Escherichia coli S17]
Length = 210
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|309805713|ref|ZP_07699753.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 09V1-c]
gi|329921292|ref|ZP_08277730.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 1401G]
gi|308164966|gb|EFO67209.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 09V1-c]
gi|328934584|gb|EGG31088.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 1401G]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 77/114 (67%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N +F +A +P DLPEIA +GRSNVGKSS++NA+ + + RTS +PG TQT+
Sbjct: 3 VNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTK 114
NF+ + T L VD+PGYG+A +E + + E++++Y+ TR LK + LL+D +
Sbjct: 63 NFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDAR 116
>gi|110807451|ref|YP_690971.1| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 5
str. 8401]
gi|344915363|ref|NP_709663.4| hypothetical protein SF3935 [Shigella flexneri 2a str. 301]
gi|417740405|ref|ZP_12388974.1| hypothetical protein SF434370_3790 [Shigella flexneri 4343-70]
gi|424839833|ref|ZP_18264470.1| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 5a
str. M90T]
gi|30043106|gb|AAP18828.1| hypothetical protein S3811 [Shigella flexneri 2a str. 2457T]
gi|56384010|gb|AAN45370.2| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110616999|gb|ABF05666.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|332751660|gb|EGJ82059.1| hypothetical protein SF434370_3790 [Shigella flexneri 4343-70]
gi|383468885|gb|EID63906.1| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 5a
str. M90T]
Length = 198
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A+ + E++ A N VQ V SS G+ LR
Sbjct: 123 DSNIAVLVLLTKADKL--ASGARKALLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|15834041|ref|NP_312814.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. Sakai]
gi|161367480|ref|NP_290489.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EDL933]
gi|168755530|ref|ZP_02780537.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4401]
gi|168768147|ref|ZP_02793154.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4486]
gi|168780765|ref|ZP_02805772.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4076]
gi|168786702|ref|ZP_02811709.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC869]
gi|168799576|ref|ZP_02824583.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC508]
gi|195937501|ref|ZP_03082883.1| GTPase EngB [Escherichia coli O157:H7 str. EC4024]
gi|208807401|ref|ZP_03249738.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4206]
gi|208814207|ref|ZP_03255536.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4045]
gi|208819675|ref|ZP_03259995.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4042]
gi|209398819|ref|YP_002273380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4115]
gi|217326295|ref|ZP_03442379.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. TW14588]
gi|254795855|ref|YP_003080692.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. TW14359]
gi|261223491|ref|ZP_05937772.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261257254|ref|ZP_05949787.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK966]
gi|291285275|ref|YP_003502093.1| GTP-binding protein engB [Escherichia coli O55:H7 str. CB9615]
gi|387509308|ref|YP_006161564.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. RM12579]
gi|387885086|ref|YP_006315388.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
Xuzhou21]
gi|416315400|ref|ZP_11659338.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1044]
gi|416319689|ref|ZP_11662241.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. EC1212]
gi|416327971|ref|ZP_11667840.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1125]
gi|416778888|ref|ZP_11876138.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. G5101]
gi|416790194|ref|ZP_11881031.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. 493-89]
gi|416801967|ref|ZP_11885919.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. H 2687]
gi|416812818|ref|ZP_11890841.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. 3256-97]
gi|416833615|ref|ZP_11900453.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. LSU-61]
gi|417142399|ref|ZP_11984974.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0259]
gi|417311424|ref|ZP_12098160.1| GTP-binding protein [Escherichia coli PCN033]
gi|419047942|ref|ZP_13594870.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3A]
gi|419059776|ref|ZP_13606573.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3C]
gi|419065165|ref|ZP_13611871.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3D]
gi|419072207|ref|ZP_13617803.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3E]
gi|419078148|ref|ZP_13623643.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3F]
gi|419083185|ref|ZP_13628625.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4A]
gi|419089169|ref|ZP_13634516.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4B]
gi|419100850|ref|ZP_13646034.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4D]
gi|419106498|ref|ZP_13651618.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4E]
gi|419111892|ref|ZP_13656940.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4F]
gi|419123154|ref|ZP_13668092.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5B]
gi|419128662|ref|ZP_13673529.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5C]
gi|419134159|ref|ZP_13678978.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5D]
gi|419139225|ref|ZP_13684013.1| putative GTP-binding protein EngB [Escherichia coli DEC5E]
gi|420277993|ref|ZP_14780270.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA40]
gi|420280184|ref|ZP_14782437.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW06591]
gi|420295050|ref|ZP_14797156.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW11039]
gi|420306928|ref|ZP_14808912.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10119]
gi|420312223|ref|ZP_14814147.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1738]
gi|420317933|ref|ZP_14819800.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1734]
gi|421814932|ref|ZP_16250629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0416]
gi|421820665|ref|ZP_16256146.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0821]
gi|421826642|ref|ZP_16261993.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK920]
gi|421827513|ref|ZP_16262852.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA7]
gi|422835410|ref|ZP_16883465.1| GTP-binding protein engB [Escherichia coli E101]
gi|422976188|ref|ZP_16977024.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA124]
gi|423728107|ref|ZP_17701870.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA31]
gi|424086590|ref|ZP_17823058.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA517]
gi|424093003|ref|ZP_17828909.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1996]
gi|424112527|ref|ZP_17846736.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93-001]
gi|424137136|ref|ZP_17869554.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA10]
gi|424150063|ref|ZP_17881421.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA15]
gi|424163791|ref|ZP_17886841.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA24]
gi|424257731|ref|ZP_17892381.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA25]
gi|424336129|ref|ZP_17898317.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA28]
gi|424452397|ref|ZP_17904021.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA32]
gi|424465092|ref|ZP_17915392.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA39]
gi|424471325|ref|ZP_17921105.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA41]
gi|424477813|ref|ZP_17927111.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA42]
gi|424483597|ref|ZP_17932560.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07945]
gi|424489792|ref|ZP_17938311.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09098]
gi|424496488|ref|ZP_17944000.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09195]
gi|424503113|ref|ZP_17949979.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4203]
gi|424509385|ref|ZP_17955734.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4196]
gi|424516789|ref|ZP_17961355.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14313]
gi|424522918|ref|ZP_17967005.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14301]
gi|424528789|ref|ZP_17972483.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4421]
gi|424547168|ref|ZP_17989480.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4402]
gi|424553364|ref|ZP_17995173.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4439]
gi|424565886|ref|ZP_18006871.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4437]
gi|425106743|ref|ZP_18509041.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.2239]
gi|425128674|ref|ZP_18529827.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0586]
gi|425134441|ref|ZP_18535276.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.2524]
gi|425141035|ref|ZP_18541399.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0833]
gi|425146709|ref|ZP_18546685.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0869]
gi|425152825|ref|ZP_18552422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.0221]
gi|425165043|ref|ZP_18563913.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA506]
gi|425170791|ref|ZP_18569248.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA507]
gi|425182894|ref|ZP_18580574.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1999]
gi|425195922|ref|ZP_18592676.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE1487]
gi|425202400|ref|ZP_18598592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE037]
gi|425214535|ref|ZP_18609921.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA4]
gi|425220663|ref|ZP_18615609.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA23]
gi|425227308|ref|ZP_18621758.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA49]
gi|425233465|ref|ZP_18627488.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA45]
gi|425239387|ref|ZP_18633091.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TT12B]
gi|425245623|ref|ZP_18638913.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MA6]
gi|425251817|ref|ZP_18644744.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5905]
gi|425257617|ref|ZP_18650095.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CB7326]
gi|425263871|ref|ZP_18655846.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC96038]
gi|425269863|ref|ZP_18661473.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5412]
gi|425297335|ref|ZP_18687442.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA38]
gi|425332466|ref|ZP_18720262.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1846]
gi|425338643|ref|ZP_18725965.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1847]
gi|425357048|ref|ZP_18743093.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1850]
gi|425362998|ref|ZP_18748629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1856]
gi|425369264|ref|ZP_18754324.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1862]
gi|425388455|ref|ZP_18771997.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1866]
gi|425395183|ref|ZP_18778272.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1868]
gi|425401238|ref|ZP_18783927.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1869]
gi|425407333|ref|ZP_18789537.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1870]
gi|425413691|ref|ZP_18795436.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE098]
gi|425420089|ref|ZP_18801338.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK523]
gi|425431303|ref|ZP_18811895.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
0.1304]
gi|428955783|ref|ZP_19027556.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1042]
gi|428961913|ref|ZP_19033169.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
89.0511]
gi|428968404|ref|ZP_19039091.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0091]
gi|428974209|ref|ZP_19044503.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0039]
gi|428980640|ref|ZP_19050429.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.2281]
gi|428986360|ref|ZP_19055732.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0055]
gi|428992498|ref|ZP_19061469.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0056]
gi|428998395|ref|ZP_19066969.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
94.0618]
gi|429004784|ref|ZP_19072826.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0183]
gi|429010822|ref|ZP_19078201.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.1288]
gi|429023187|ref|ZP_19089685.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0428]
gi|429035350|ref|ZP_19100856.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0939]
gi|429041458|ref|ZP_19106529.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0932]
gi|429047281|ref|ZP_19111976.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0107]
gi|429052637|ref|ZP_19117192.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0003]
gi|429058197|ref|ZP_19122437.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.1742]
gi|429063712|ref|ZP_19127667.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0007]
gi|429075692|ref|ZP_19138933.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0678]
gi|429829121|ref|ZP_19360098.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0109]
gi|429835586|ref|ZP_19365810.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0010]
gi|432452125|ref|ZP_19694379.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE193]
gi|433035788|ref|ZP_20223473.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE112]
gi|444927606|ref|ZP_21246858.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
09BKT078844]
gi|444933215|ref|ZP_21252210.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0814]
gi|444938762|ref|ZP_21257481.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0815]
gi|444944333|ref|ZP_21262805.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0816]
gi|444960788|ref|ZP_21278598.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1753]
gi|444966027|ref|ZP_21283577.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1775]
gi|444972050|ref|ZP_21289377.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1793]
gi|444977338|ref|ZP_21294402.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1805]
gi|444982720|ref|ZP_21299614.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC
700728]
gi|444988090|ref|ZP_21304855.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA11]
gi|444993468|ref|ZP_21310097.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA19]
gi|444998646|ref|ZP_21315134.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA13]
gi|445004191|ref|ZP_21320569.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA2]
gi|445009611|ref|ZP_21325828.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA47]
gi|445014689|ref|ZP_21330782.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA48]
gi|445020610|ref|ZP_21336563.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA8]
gi|445026020|ref|ZP_21341831.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
7.1982]
gi|445031427|ref|ZP_21347081.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1781]
gi|445036898|ref|ZP_21352412.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1762]
gi|445053315|ref|ZP_21368318.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0083]
gi|445056351|ref|ZP_21371251.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0670]
gi|450195820|ref|ZP_21892663.1| GTP-binding protein YsxC [Escherichia coli SEPT362]
gi|452969521|ref|ZP_21967748.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4009]
gi|21362528|sp|Q8X8H0.1|ENGB_ECO57 RecName: Full=Probable GTP-binding protein EngB
gi|238058983|sp|B5YZ00.1|ENGB_ECO5E RecName: Full=Probable GTP-binding protein EngB
gi|13364263|dbj|BAB38210.1| essential GTPase for cell cycle [Escherichia coli O157:H7 str.
Sakai]
gi|189001573|gb|EDU70559.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4076]
gi|189357180|gb|EDU75599.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4401]
gi|189362605|gb|EDU81024.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4486]
gi|189373339|gb|EDU91755.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC869]
gi|189378061|gb|EDU96477.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC508]
gi|208727202|gb|EDZ76803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4206]
gi|208735484|gb|EDZ84171.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4045]
gi|208739798|gb|EDZ87480.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4042]
gi|209160219|gb|ACI37652.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4115]
gi|209752828|gb|ACI74721.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752830|gb|ACI74722.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752832|gb|ACI74723.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752834|gb|ACI74724.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752836|gb|ACI74725.1| hypothetical protein ECs4787 [Escherichia coli]
gi|217322516|gb|EEC30940.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. TW14588]
gi|254595255|gb|ACT74616.1| GTP-binding protein [Escherichia coli O157:H7 str. TW14359]
gi|290765148|gb|ADD59109.1| Probable GTP-binding protein engB [Escherichia coli O55:H7 str.
CB9615]
gi|320191045|gb|EFW65695.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. EC1212]
gi|320639202|gb|EFX08829.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. G5101]
gi|320644590|gb|EFX13644.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. 493-89]
gi|320649914|gb|EFX18422.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. H 2687]
gi|320655221|gb|EFX23167.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320666007|gb|EFX33026.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. LSU-61]
gi|326338133|gb|EGD61963.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1044]
gi|326342573|gb|EGD66346.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1125]
gi|338767001|gb|EGP21885.1| GTP-binding protein [Escherichia coli PCN033]
gi|371594309|gb|EHN83178.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA124]
gi|371612390|gb|EHO00901.1| GTP-binding protein engB [Escherichia coli E101]
gi|374361302|gb|AEZ43009.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. RM12579]
gi|377888846|gb|EHU53316.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3A]
gi|377901736|gb|EHU66050.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3C]
gi|377905300|gb|EHU69571.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3D]
gi|377906187|gb|EHU70436.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3E]
gi|377916901|gb|EHU80975.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3F]
gi|377922817|gb|EHU86792.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4A]
gi|377926431|gb|EHU90365.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4B]
gi|377937123|gb|EHV00910.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4D]
gi|377943528|gb|EHV07238.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4E]
gi|377953584|gb|EHV17153.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4F]
gi|377961431|gb|EHV24899.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5B]
gi|377969153|gb|EHV32533.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5C]
gi|377969842|gb|EHV33216.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5D]
gi|377980083|gb|EHV43351.1| putative GTP-binding protein EngB [Escherichia coli DEC5E]
gi|386155423|gb|EIH11778.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0259]
gi|386798544|gb|AFJ31578.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
Xuzhou21]
gi|390637070|gb|EIN16629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1996]
gi|390638119|gb|EIN17636.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA517]
gi|390656502|gb|EIN34368.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93-001]
gi|390691719|gb|EIN66445.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA10]
gi|390697305|gb|EIN71729.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA15]
gi|390717265|gb|EIN90052.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA24]
gi|390718023|gb|EIN90788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA25]
gi|390724196|gb|EIN96765.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA28]
gi|390736738|gb|EIO08061.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA31]
gi|390737376|gb|EIO08675.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA32]
gi|390755587|gb|EIO25123.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA40]
gi|390758335|gb|EIO27797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA39]
gi|390761667|gb|EIO30944.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA41]
gi|390764751|gb|EIO33950.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA42]
gi|390783327|gb|EIO50934.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW06591]
gi|390785986|gb|EIO53526.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07945]
gi|390792929|gb|EIO60276.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW11039]
gi|390799930|gb|EIO67053.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09098]
gi|390813425|gb|EIO80041.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10119]
gi|390821884|gb|EIO88048.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09195]
gi|390822352|gb|EIO88479.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4203]
gi|390827445|gb|EIO93212.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4196]
gi|390840628|gb|EIP04647.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14313]
gi|390842568|gb|EIP06409.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14301]
gi|390847699|gb|EIP11229.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4421]
gi|390866454|gb|EIP28414.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4402]
gi|390874783|gb|EIP35875.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4439]
gi|390889961|gb|EIP49651.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4437]
gi|390897732|gb|EIP57039.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1738]
gi|390905663|gb|EIP64593.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1734]
gi|408063513|gb|EKG98004.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK920]
gi|408074408|gb|EKH08690.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA7]
gi|408075079|gb|EKH09322.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA506]
gi|408080071|gb|EKH14161.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA507]
gi|408094418|gb|EKH27440.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1999]
gi|408105567|gb|EKH37718.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE1487]
gi|408112411|gb|EKH44066.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE037]
gi|408124877|gb|EKH55520.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA4]
gi|408134637|gb|EKH64457.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA23]
gi|408136722|gb|EKH66457.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA49]
gi|408143600|gb|EKH72879.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA45]
gi|408151981|gb|EKH80435.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TT12B]
gi|408157042|gb|EKH85215.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MA6]
gi|408161159|gb|EKH89133.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5905]
gi|408170214|gb|EKH97432.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CB7326]
gi|408177147|gb|EKI03966.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC96038]
gi|408180095|gb|EKI06726.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5412]
gi|408210479|gb|EKI35042.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA38]
gi|408242755|gb|EKI65309.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1846]
gi|408251697|gb|EKI73417.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1847]
gi|408270893|gb|EKI91047.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1850]
gi|408274068|gb|EKI94096.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1856]
gi|408281979|gb|EKJ01332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1862]
gi|408303046|gb|EKJ20514.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1868]
gi|408304366|gb|EKJ21794.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1866]
gi|408315688|gb|EKJ31992.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1869]
gi|408321158|gb|EKJ37200.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1870]
gi|408322923|gb|EKJ38896.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE098]
gi|408333639|gb|EKJ48585.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK523]
gi|408341648|gb|EKJ56091.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
0.1304]
gi|408544677|gb|EKK22126.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.2239]
gi|408563283|gb|EKK39420.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0586]
gi|408575540|gb|EKK51198.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0833]
gi|408578279|gb|EKK53798.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.2524]
gi|408588190|gb|EKK62778.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0869]
gi|408593139|gb|EKK67467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.0221]
gi|408598789|gb|EKK72730.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0416]
gi|408608533|gb|EKK81923.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0821]
gi|427200912|gb|EKV71319.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
89.0511]
gi|427201164|gb|EKV71560.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1042]
gi|427217428|gb|EKV86490.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0091]
gi|427221194|gb|EKV90062.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.2281]
gi|427224073|gb|EKV92795.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0039]
gi|427237704|gb|EKW05229.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0056]
gi|427237787|gb|EKW05310.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0055]
gi|427242369|gb|EKW09780.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
94.0618]
gi|427255637|gb|EKW21886.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0183]
gi|427257719|gb|EKW23836.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.1288]
gi|427272982|gb|EKW37688.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0428]
gi|427280221|gb|EKW44586.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0939]
gi|427288786|gb|EKW52387.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0932]
gi|427295665|gb|EKW58751.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0107]
gi|427297469|gb|EKW60503.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0003]
gi|427307710|gb|EKW70145.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.1742]
gi|427310641|gb|EKW72880.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0007]
gi|427324780|gb|EKW86240.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0678]
gi|429250588|gb|EKY35240.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0109]
gi|429251053|gb|EKY35681.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0010]
gi|430977275|gb|ELC94126.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE193]
gi|431545538|gb|ELI20189.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE112]
gi|444534788|gb|ELV14972.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0814]
gi|444536241|gb|ELV16271.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
09BKT078844]
gi|444545042|gb|ELV23999.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0815]
gi|444554138|gb|ELV31718.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0816]
gi|444568752|gb|ELV45405.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1753]
gi|444572221|gb|ELV48666.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1775]
gi|444575640|gb|ELV51870.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1793]
gi|444587766|gb|ELV63175.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1805]
gi|444588932|gb|ELV64289.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC
700728]
gi|444589143|gb|ELV64486.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA11]
gi|444602938|gb|ELV77655.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA13]
gi|444603036|gb|ELV77752.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA19]
gi|444612200|gb|ELV86500.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA2]
gi|444618733|gb|ELV92804.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA47]
gi|444620086|gb|ELV94102.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA48]
gi|444626413|gb|ELW00207.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA8]
gi|444634958|gb|ELW08400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
7.1982]
gi|444636945|gb|ELW10328.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1781]
gi|444641771|gb|ELW14989.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1762]
gi|444659309|gb|ELW31729.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0083]
gi|444671739|gb|ELW43523.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0670]
gi|449315925|gb|EMD06051.1| GTP-binding protein YsxC [Escherichia coli SEPT362]
Length = 210
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|420338357|ref|ZP_14839913.1| putative GTP-binding protein EngB [Shigella flexneri K-315]
gi|391258471|gb|EIQ17570.1| putative GTP-binding protein EngB [Shigella flexneri K-315]
Length = 198
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEIKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 123 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|432871789|ref|ZP_20091783.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE147]
gi|431407284|gb|ELG90496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE147]
Length = 210
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|255087758|ref|XP_002505802.1| predicted protein [Micromonas sp. RCC299]
gi|226521072|gb|ACO67060.1| predicted protein [Micromonas sp. RCC299]
Length = 531
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 15/191 (7%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT---KLCLVD 73
P P PE+A GRSNVGKSS++N LT + + +TS PG T+TIN F++ T VD
Sbjct: 317 PPPKHPEVAVIGRSNVGKSSLVNMLTNRKDIAKTSKNPGKTRTINHFEMITGDGTWYFVD 376
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR--DHELISLMERS 131
LPGYGFA A EE + W E +EY+ R +L V LLID+ VKP+ D E + + +
Sbjct: 377 LPGYGFANAPEEARRKWAEFTREYLLGRPNLLSVMLLIDST--VKPQRLDLECLEFLGEN 434
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ-------PVMMVSSKSGAGIRS 184
VV TK D + +RA EE+++A V P++ SSK+G G ++
Sbjct: 435 NIPVTVVFTKVDKKRKVKSGKRA-NPEENVEAFCREVSEYWDELPPMIFTSSKTGDGKQA 493
Query: 185 LRTVLSKIARF 195
+ ++ + +F
Sbjct: 494 VLNHVATLRQF 504
>gi|226324369|ref|ZP_03799887.1| hypothetical protein COPCOM_02150 [Coprococcus comes ATCC 27758]
gi|225206817|gb|EEG89171.1| ribosome biogenesis GTP-binding protein YsxC [Coprococcus comes
ATCC 27758]
Length = 200
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 87/151 (57%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P LPEIAFAG+SNVGKSS++NAL + + RTS KPG TQTINF+ + ++ L
Sbjct: 14 ITSKLPDHTLPEIAFAGKSNVGKSSLINALMNRKALARTSAKPGKTQTINFYNINEEMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A E+ K W +L++ Y+ L+ V LLID + D + +
Sbjct: 74 VDLPGYGYAKVSEQEKAQWGKLIERYLHGSKQLRAVFLLIDIRHDPSANDKMMYDWIVDQ 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++ TK D + V ++ I+ LK
Sbjct: 134 GFNPIIIATKLDKLKRSQVQKQVKAIKTGLK 164
>gi|71732506|gb|EAO34559.1| GTP-binding protein [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 219
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ +A P+ D E+AFAGRSN GKSS+LN LTRQ + R S PG TQ + +F
Sbjct: 25 KYLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFT 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A +E++ W+ + Y R SL+ + +++D + +K D ++
Sbjct: 85 VTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQM 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ + Q +LTK D + A+ ++ L + + + SSKS G+
Sbjct: 145 LAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQ 204
Query: 185 LRTVL 189
L TV+
Sbjct: 205 LHTVI 209
>gi|407698104|ref|YP_006822892.1| GTPase [Alcanivorax dieselolei B5]
gi|407255442|gb|AFT72549.1| GTPase, putative [Alcanivorax dieselolei B5]
Length = 222
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+++ F +A++ P + E+AFAGRSN GKSS +N LT Q + RTS PG TQ +
Sbjct: 21 LHQAAFLKSAQIVEQCPPDEGLEVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLL 80
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF L + LVDLPGYG+A + V+ W+E + +Y++ R L + LL+D + ++
Sbjct: 81 NFFTLDEQRRLVDLPGYGYAKVDKAVRMQWQEHLDDYLARRECLTGLVLLMDIRHPLREF 140
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRA-MQIEESLKANNSLVQPVMMVSSKSG 179
D ++ RS ++LTK D + A+ A MQ+ ++LK + + ++ V + S+ SG
Sbjct: 141 DQLMLEWSARSGMPLLILLTKADKL-KFGAAKSALMQVTKTLKDHPAPLR-VQLFSATSG 198
Query: 180 AG 181
G
Sbjct: 199 QG 200
>gi|424818147|ref|ZP_18243298.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii ECD227]
gi|325499167|gb|EGC97026.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii ECD227]
Length = 207
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 7 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 67 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 127 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 183
Query: 183 RSLRTVLS 190
LR L
Sbjct: 184 DKLRQKLD 191
>gi|259500683|ref|ZP_05743585.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
DSM 13335]
gi|302191373|ref|ZP_07267627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
AB-1]
gi|312871414|ref|ZP_07731509.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 3008A-a]
gi|312872272|ref|ZP_07732342.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2062A-h1]
gi|312875467|ref|ZP_07735470.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2053A-b]
gi|325912884|ref|ZP_08175262.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 60-B]
gi|259168067|gb|EEW52562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
DSM 13335]
gi|311088978|gb|EFQ47419.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2053A-b]
gi|311092095|gb|EFQ50469.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2062A-h1]
gi|311093067|gb|EFQ51416.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 3008A-a]
gi|325477877|gb|EGC81011.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 60-B]
Length = 195
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 77/114 (67%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N +F +A +P DLPEIA +GRSNVGKSS++NA+ + + RTS +PG TQT+
Sbjct: 3 VNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTK 114
NF+ + T L VD+PGYG+A +E + + E++++Y+ TR LK + LL+D +
Sbjct: 63 NFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDAR 116
>gi|161617123|ref|YP_001591088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|417369477|ref|ZP_12140656.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417542924|ref|ZP_12194243.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|189037187|sp|A9MYC7.1|ENGB_SALPB RecName: Full=Probable GTP-binding protein EngB
gi|161366487|gb|ABX70255.1| hypothetical protein SPAB_04962 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|353584163|gb|EHC44347.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353657725|gb|EHC98092.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 210
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDRGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IQWAVESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|420388224|ref|ZP_14887552.1| putative GTP-binding protein EngB [Escherichia coli EPECa12]
gi|391301187|gb|EIQ59085.1| putative GTP-binding protein EngB [Escherichia coli EPECa12]
Length = 198
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|422337783|ref|ZP_16418753.1| GTP-binding protein engB [Aggregatibacter aphrophilus F0387]
gi|353345115|gb|EHB89413.1| GTP-binding protein engB [Aggregatibacter aphrophilus F0387]
Length = 204
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A S P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFLTSAPNLKSLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ K LVDLPGYG+A E++K W+ + EY+ R L + +L+D + +K D
Sbjct: 69 LFEVEPKCKLVDLPGYGYAAVPEQMKQQWQHALGEYLQKRECLAGIIVLMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++I + ++LTK D + + +++ + E++
Sbjct: 129 QQMIEWAVSADLPILLLLTKADKLSQSERSKQVKMVREAI 168
>gi|161984817|ref|YP_410156.2| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii
Sb227]
gi|416298144|ref|ZP_11651861.1| GTP-binding protein EngB [Shigella flexneri CDC 796-83]
gi|417684635|ref|ZP_12333972.1| hypothetical protein SB359474_4457 [Shigella boydii 3594-74]
gi|420327808|ref|ZP_14829547.1| putative GTP-binding protein EngB [Shigella flexneri CCH060]
gi|420355447|ref|ZP_14856511.1| putative GTP-binding protein EngB [Shigella boydii 4444-74]
gi|119369256|sp|Q31UD0.2|ENGB_SHIBS RecName: Full=Probable GTP-binding protein EngB
gi|320185488|gb|EFW60256.1| GTP-binding protein EngB [Shigella flexneri CDC 796-83]
gi|332088563|gb|EGI93677.1| hypothetical protein SB359474_4457 [Shigella boydii 3594-74]
gi|391246193|gb|EIQ05455.1| putative GTP-binding protein EngB [Shigella flexneri CCH060]
gi|391272351|gb|EIQ31205.1| putative GTP-binding protein EngB [Shigella boydii 4444-74]
Length = 210
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRHSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|392949119|ref|ZP_10314714.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
pentosus KCA1]
gi|392435708|gb|EIW13637.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
pentosus KCA1]
Length = 197
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ +E +A S +P PEI AGRSNVGKSS++N L + RTS +PG TQT+
Sbjct: 3 VHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ +L VD+PGYG+A ++ ++ W ++++ Y++TR +L+ V +L+D +
Sbjct: 63 NFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTTRETLRGVVILVDARHAPTKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D + M + VV TK+D +
Sbjct: 123 DVAMYEWMRYYEMPLLVVATKSDKI 147
>gi|387831770|ref|YP_003351707.1| GTP-binding protein [Escherichia coli SE15]
gi|432502436|ref|ZP_19744183.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE216]
gi|432696744|ref|ZP_19931933.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE162]
gi|432923159|ref|ZP_20125854.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE173]
gi|432929914|ref|ZP_20130790.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE175]
gi|432983402|ref|ZP_20172151.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE211]
gi|433098709|ref|ZP_20284872.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE139]
gi|433108141|ref|ZP_20294096.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE148]
gi|281180927|dbj|BAI57257.1| GTP-binding protein [Escherichia coli SE15]
gi|431025508|gb|ELD38610.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE216]
gi|431230515|gb|ELF26294.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE162]
gi|431434105|gb|ELH15757.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE173]
gi|431439287|gb|ELH20622.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE175]
gi|431486755|gb|ELH66401.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE211]
gi|431611838|gb|ELI81101.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE139]
gi|431623191|gb|ELI91865.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE148]
Length = 210
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S V+LTK D + + + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKLASGACKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDK 188
Query: 185 LRTVLS 190
LR L
Sbjct: 189 LRQKLD 194
>gi|417829953|ref|ZP_12476493.1| cell division protein putative checkpoint GTPase [Shigella flexneri
J1713]
gi|419367702|ref|ZP_13908849.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13E]
gi|419804623|ref|ZP_14329777.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AI27]
gi|425117490|ref|ZP_18519260.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0566]
gi|335573635|gb|EGM59986.1| cell division protein putative checkpoint GTPase [Shigella flexneri
J1713]
gi|378209436|gb|EHX69809.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13E]
gi|384472341|gb|EIE56398.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AI27]
gi|408562764|gb|EKK38916.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0566]
Length = 207
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 7 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 67 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 127 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 183
Query: 183 RSLRTVLS 190
LR L
Sbjct: 184 DKLRQKLD 191
>gi|419053740|ref|ZP_13600604.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3B]
gi|419095073|ref|ZP_13640346.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4C]
gi|419117427|ref|ZP_13662432.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5A]
gi|428949710|ref|ZP_19021965.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1467]
gi|429017285|ref|ZP_19084144.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0943]
gi|429029208|ref|ZP_19095162.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0427]
gi|429069916|ref|ZP_19133336.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0672]
gi|429080940|ref|ZP_19144063.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0713]
gi|444949775|ref|ZP_21268055.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0839]
gi|444955422|ref|ZP_21273475.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0848]
gi|445042529|ref|ZP_21357889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA35]
gi|445047733|ref|ZP_21362969.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.4880]
gi|377888947|gb|EHU53415.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3B]
gi|377937617|gb|EHV01393.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4C]
gi|377956907|gb|EHV20446.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5A]
gi|427204451|gb|EKV74727.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1467]
gi|427257252|gb|EKW23383.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0943]
gi|427274652|gb|EKW39299.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0427]
gi|427315291|gb|EKW77295.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0672]
gi|427325915|gb|EKW87342.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0713]
gi|444554497|gb|ELV32060.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0839]
gi|444559050|gb|ELV36298.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0848]
gi|444651582|gb|ELW24383.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA35]
gi|444656835|gb|ELW29343.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.4880]
Length = 207
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 7 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 67 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 127 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 183
Query: 183 RSLRTVLS 190
LR L
Sbjct: 184 DKLRQKLD 191
>gi|423199151|ref|ZP_17185734.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas hydrophila
SSU]
gi|404629505|gb|EKB26252.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas hydrophila
SSU]
Length = 216
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
NK+ F +A P EIAFAGRSN GKSS LN LT+ + RTS PG TQ IN
Sbjct: 9 NKVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+L LVDLPGYG+A E+K W++ + EY+ R SLK + +L+D + +K D
Sbjct: 69 LFELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ ++LTK D + P + +++ +++ A +Q V SS + G
Sbjct: 129 MNMLEWSAHRALPVMLLLTKADKLSPGPRNNQVIKVRQAVAALGPHIQ-VEAFSSLNNIG 187
Query: 182 IRSLRTVLS 190
+ L L+
Sbjct: 188 VEKLAQTLT 196
>gi|423142480|ref|ZP_17130118.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379049693|gb|EHY67587.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 210
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 5/187 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + ++LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IQWAVESNIQVLILLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVL 189
LR L
Sbjct: 187 DKLRQKL 193
>gi|261250088|ref|ZP_05942665.1| GTP-binding protein EngB [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417955024|ref|ZP_12598050.1| putative GTP-binding protein EngB [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939592|gb|EEX95577.1| GTP-binding protein EngB [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342814072|gb|EGU49024.1| putative GTP-binding protein EngB [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 221
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A + PA + E+AFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRALPADEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + ++I++ V V SS G G+
Sbjct: 131 IFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGFGGDVS-VAAFSSLKGLGVDV 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRNKLDE 196
>gi|227535176|ref|ZP_03965225.1| GTPase [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187221|gb|EEI67288.1| GTPase [Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 198
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A ++ +P PEIAF GRSNVGKSS++N L ++ + RTS PG TQT+NF+ L ++
Sbjct: 11 SAVAAAQYPEDGHPEIAFLGRSNVGKSSLINKLIQRKAMARTSGVPGKTQTLNFYDLDSR 70
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + + +++ Y++TR L+ + LL+D++ D + +
Sbjct: 71 LFFVDVPGYGYAKVSKTARAKFAAMIETYLTTRQPLRGIVLLVDSRHEPTADDISMYQYL 130
Query: 129 ERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTV 188
+ Q + VV TK D A QI++ L N + V++ S+ +G G ++ +
Sbjct: 131 KYYQLRTLVVATKIDKTPKSKRLHVAKQIKQRLDLNQT--DDVILFSATTGEGYEAVWSW 188
Query: 189 LSKIA 193
L + A
Sbjct: 189 LEQTA 193
>gi|293470176|ref|ZP_06664587.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B088]
gi|427807055|ref|ZP_18974122.1| gtp-binding protein [Escherichia coli chi7122]
gi|427811644|ref|ZP_18978709.1| hypothetical protein BN17_38121 [Escherichia coli]
gi|291321386|gb|EFE60825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B088]
gi|412965237|emb|CCK49168.1| gtp-binding protein [Escherichia coli chi7122]
gi|412971823|emb|CCJ46489.1| hypothetical protein BN17_38121 [Escherichia coli]
Length = 216
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 16 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 75
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 76 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 135
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 136 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 192
Query: 183 RSLRTVLS 190
LR L
Sbjct: 193 DKLRQKLD 200
>gi|227486250|ref|ZP_03916566.1| GTPase [Anaerococcus lactolyticus ATCC 51172]
gi|227235661|gb|EEI85676.1| GTPase [Anaerococcus lactolyticus ATCC 51172]
Length = 195
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 91/162 (56%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ +E A + +P LPEIAF GRSNVGKSS +N+ + + + + S KPG T+TI
Sbjct: 3 IKNIELEQVAGFKAQWPKDALPEIAFVGRSNVGKSSFINSFSNRKAIAKISSKPGKTRTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF++ LVDLPGYGFA + K W++L+ EY+ R +LK V L++D + +
Sbjct: 63 NFYRANDTFRLVDLPGYGFAKVSKAEKAKWDKLINEYLHDRENLKEVFLIVDIRHEPTAQ 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
D ++ + S V+ TK D + + + QI++ L+
Sbjct: 123 DKQMYEWIIDSGYMGFVIATKFDKISKGQIQKHINQIKKKLE 164
>gi|333904859|ref|YP_004478730.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333120124|gb|AEF25058.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|456370743|gb|EMF49639.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
Length = 199
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 83/137 (60%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANQSHYPDDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY++TR +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDNLRAVVSLVDLRHEPSTEDVQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + VV TK D +
Sbjct: 137 KYYEIPVIVVATKADKI 153
>gi|329116776|ref|ZP_08245493.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parauberis NCFD 2020]
gi|326907181|gb|EGE54095.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parauberis NCFD 2020]
gi|457095610|gb|EMG26081.1| GTP-binding protein EngB [Streptococcus parauberis KRS-02083]
Length = 199
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 83/137 (60%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANQSHYPDDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY++TR +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDNLRAVVSLVDLRHEPSTEDVQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + VV TK D +
Sbjct: 137 KYYEIPVIVVATKADKI 153
>gi|402297606|ref|ZP_10817368.1| GTP-binding protein YsxC [Bacillus alcalophilus ATCC 27647]
gi|401727143|gb|EJT00339.1| GTP-binding protein YsxC [Bacillus alcalophilus ATCC 27647]
Length = 195
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 4 LEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF 63
+E A +P LPE+A AGRSNVGKSS +N + + + RTS +PG TQT+NF+
Sbjct: 6 VELATVAVKPEQYPNTQLPEVALAGRSNVGKSSFINKMINRKALARTSGRPGKTQTLNFY 65
Query: 64 KLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
+ + VD+PGYGFA + ++AW +++ Y+ +R LK V LID + D
Sbjct: 66 MVNEMVYFVDVPGYGFAKVSKSEREAWGRMIETYLQSREPLKAVIQLIDIRHKPSQDDKL 125
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI- 182
+ ++ + +V TK+D + + IE+ L N PV++ SS++G G
Sbjct: 126 MYEWLKHFEIPVIIVATKSDKIPKGKWQKHQKVIEKEL--NKHPEDPVVLFSSETGNGKE 183
Query: 183 RSLRTVLSKIAR 194
+ R +L I +
Sbjct: 184 EAWRKILHYIGK 195
>gi|224089064|ref|XP_002308620.1| predicted protein [Populus trichocarpa]
gi|222854596|gb|EEE92143.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 80/139 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF ++ + P+ LPE A GRSNVGKSS+LN+L R+ + TS KPG TQ IN FK
Sbjct: 112 EFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFK 171
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A A +E++ W + K+Y R +L V LLID K D E
Sbjct: 172 VNDSWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEY 231
Query: 125 ISLMERSQTKYQVVLTKTD 143
S + ++Q + TK D
Sbjct: 232 ASWLGQNQVPMTFIFTKCD 250
>gi|424042399|ref|ZP_17780122.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-02]
gi|408889640|gb|EKM28007.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-02]
Length = 219
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|334882265|emb|CCB83253.1| putative GTP-binding protein engB [Lactobacillus pentosus MP-10]
gi|339639090|emb|CCC18309.1| putative GTP-binding protein EngB [Lactobacillus pentosus IG1]
Length = 197
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ +E +A S +P PEI AGRSNVGKSS++N L + RTS +PG TQT+
Sbjct: 3 VHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ +L VD+PGYG+A ++ ++ W ++++ Y++TR +L+ V +L+D +
Sbjct: 63 NFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTTRDTLRGVVILVDARHAPTKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D + M + VV TK+D +
Sbjct: 123 DVAMYEWMRYYEMPLLVVATKSDKI 147
>gi|327269008|ref|XP_003219287.1| PREDICTED: GTP-binding protein 8-like [Anolis carolinensis]
Length = 279
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 8/197 (4%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWG--VVRTSDKPGLTQT 59
N ++++++A P LPE+ F GRSNVGKSS++ AL VR S PG T+
Sbjct: 83 NVIDYYSSAVRMDHVPQLSLPEVCFLGRSNVGKSSLIKALFSLAPDVEVRVSKNPGHTKK 142
Query: 60 INFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
+NFFK+G LVD+PG+G+ K+ + E+V+ Y++ R +L+R LL+D + G++
Sbjct: 143 MNFFKVGKFFTLVDMPGFGYRAPKD-----FAEMVEPYLNHRPNLQRTFLLVDAQVGIQE 197
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMM-VSSKS 178
D+ I ++E Y +VLTK D +A ++I++ +K + P + VSS
Sbjct: 198 IDNIAIEMLEEFGIPYVLVLTKIDKASKRVMAMNVLKIQDFVKEKTQVCFPQLFPVSSLY 257
Query: 179 GAGIRSLRTVLSKIARF 195
+GI LR ++ +A +
Sbjct: 258 YSGIHILRCFIAHVAGY 274
>gi|238917374|ref|YP_002930891.1| GTP-binding protein [Eubacterium eligens ATCC 27750]
gi|259645895|sp|C4Z1T3.1|ENGB_EUBE2 RecName: Full=Probable GTP-binding protein EngB
gi|238872734|gb|ACR72444.1| GTP-binding protein [Eubacterium eligens ATCC 27750]
Length = 211
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 6/187 (3%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K+ V+S+ P PE+AFAG+SNVGKSS++NAL + RTS +PG TQTI
Sbjct: 3 IKKVNLDIVVGVTSTLPETPFPEVAFAGKSNVGKSSLINALMNRKSYARTSSQPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + + LVDLPGYG+A VK W +++++Y+ LK+V LLID +
Sbjct: 63 NFYNINDSMYLVDLPGYGYANVSPAVKAKWGKMIEKYLRKSSQLKQVFLLIDIRHDPSDN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMV--SSKS 178
D + + + + +V TK D + ++++ + L L Q +++ SS++
Sbjct: 123 DRMMYDWIVNNGYRPVIVATKLDKIKRSQISKQVKAVRTGL----GLRQEDILIPFSSQT 178
Query: 179 GAGIRSL 185
G++ L
Sbjct: 179 KQGLKEL 185
>gi|193211890|ref|YP_001997843.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobaculum parvum
NCIB 8327]
gi|238692673|sp|B3QQY9.1|ENGB_CHLP8 RecName: Full=Probable GTP-binding protein EngB
gi|193085367|gb|ACF10643.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 192
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 4/177 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+FF + + P+ PEI F GRSNVGKSS+LN+L + G+ +TS PG T+ IN+F
Sbjct: 7 DFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VDLPGYG+A +++W +L+ +YV R + V LL+D + D E+
Sbjct: 67 INENLYFVDLPGYGYAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGMGSDREM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ ++ + +VLTK D + + ++ IE A+N+ + ++ SS SGAG
Sbjct: 127 MEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIESC--ASNA--RFIVNYSSLSGAG 179
>gi|195978195|ref|YP_002123439.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195974900|gb|ACG62426.1| probable GTP-binding protein EngB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 200
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 84/138 (60%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 18 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 77
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVD+PGYG+A + + W ++++EY++TR +L+ V L+D + D ++ +
Sbjct: 78 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEFL 137
Query: 129 ERSQTKYQVVLTKTDTVF 146
+ + +V TK D V
Sbjct: 138 KYYEIPVIIVATKADKVL 155
>gi|372272295|ref|ZP_09508343.1| GTP-binding protein engB [Marinobacterium stanieri S30]
Length = 215
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
N F +A PA + E+AFAGRSN GKSS +NALT+Q G+ RTS PG TQ IN
Sbjct: 11 NLARFETSAARLDQCPADEGAEVAFAGRSNAGKSSAINALTQQTGLARTSKTPGRTQLIN 70
Query: 62 FFKLGTK-LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
FF L + L +VDLPGYG+A +K W+ + Y+ R SL+ V L++D + +K
Sbjct: 71 FFSLNIEGLKIVDLPGYGYAKVPIAMKQHWQRHLDAYLQHRESLRGVVLVMDIRHPMKEF 130
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D ++ E + V+LTK D + +Q++++LK V S+ +
Sbjct: 131 DEMMVHWCEATGVPLHVLLTKEDKLKRGPAKSTLLQLKKALKERLGDKVSVQTFSALKRS 190
Query: 181 GIRSLR 186
G+ LR
Sbjct: 191 GVDQLR 196
>gi|28896883|ref|NP_796488.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838823|ref|ZP_01991490.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810]
gi|260365930|ref|ZP_05778424.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus K5030]
gi|260877782|ref|ZP_05890137.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AN-5034]
gi|260895568|ref|ZP_05904064.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus Peru-466]
gi|260902593|ref|ZP_05910988.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AQ4037]
gi|417320977|ref|ZP_12107517.1| GTP-binding protein YsxC [Vibrio parahaemolyticus 10329]
gi|433656421|ref|YP_007273800.1| GTP-binding protein EngB [Vibrio parahaemolyticus BB22OP]
gi|31340058|sp|Q87TG0.1|ENGB_VIBPA RecName: Full=Probable GTP-binding protein EngB
gi|28805091|dbj|BAC58372.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149747753|gb|EDM58649.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810]
gi|308088574|gb|EFO38269.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus Peru-466]
gi|308089816|gb|EFO39511.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AN-5034]
gi|308109669|gb|EFO47209.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AQ4037]
gi|308113473|gb|EFO51013.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus K5030]
gi|328471657|gb|EGF42534.1| GTP-binding protein YsxC [Vibrio parahaemolyticus 10329]
gi|432507109|gb|AGB08626.1| GTP-binding protein EngB [Vibrio parahaemolyticus BB22OP]
Length = 219
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|421276985|ref|ZP_15727805.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SPAR10]
gi|395876266|gb|EJG87342.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SPAR10]
Length = 195
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDKLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|449919497|ref|ZP_21797989.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
1SM1]
gi|449159408|gb|EMB62750.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
1SM1]
Length = 197
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 86/139 (61%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLG 66
F +A S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ++NF+ +
Sbjct: 13 FLSAVNKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQSLNFYNID 72
Query: 67 TKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELIS 126
KL VD+PGYG+A ++ + W ++++EY+++R +L+ V L+D + D ++
Sbjct: 73 DKLRFVDVPGYGYAKVSKKERAKWGKMIEEYLTSRENLRAVVSLVDFRHDPSSDDVQMYD 132
Query: 127 LMERSQTKYQVVLTKTDTV 145
++ + ++ TK D V
Sbjct: 133 FLKYYEIPVILIATKADKV 151
>gi|424034472|ref|ZP_17773877.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-01]
gi|408873075|gb|EKM12282.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-01]
Length = 219
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|343495825|ref|ZP_08733937.1| putative GTP-binding protein EngB [Vibrio nigripulchritudo ATCC
27043]
gi|342822160|gb|EGU56911.1| putative GTP-binding protein EngB [Vibrio nigripulchritudo ATCC
27043]
Length = 217
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYA 82
E+AFAGRSN GKSS LN LT Q + +TS PG TQ IN FK+ +VDLPGYGFA
Sbjct: 29 EVAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKVYDNCHIVDLPGYGFAQV 88
Query: 83 KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKT 142
E+K W++ + EY+ R SLK + +L+D + +K D +LI S QV+LTK
Sbjct: 89 PLEMKQKWQKSLGEYLQRRESLKGLVVLMDIRHPMKDLDQQLIYWAVDSGIPVQVLLTKA 148
Query: 143 DTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
D + ++I E+ A V+ V SS G G+ LR+ L +
Sbjct: 149 DKLKSGARKSTLLKIREAALAFGGDVK-VDAFSSLKGIGVDQLRSRLDE 196
>gi|375264130|ref|YP_005021573.1| GTP-binding protein YsxC [Vibrio sp. EJY3]
gi|369839454|gb|AEX20598.1| GTP-binding protein YsxC [Vibrio sp. EJY3]
Length = 219
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVD-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|153833801|ref|ZP_01986468.1| GTP-binding protein [Vibrio harveyi HY01]
gi|444424782|ref|ZP_21220234.1| GTP-binding protein YsxC [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|148869859|gb|EDL68827.1| GTP-binding protein [Vibrio harveyi HY01]
gi|444241905|gb|ELU53423.1| GTP-binding protein YsxC [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 219
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|392395205|ref|YP_006431807.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526283|gb|AFM02014.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 213
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 2/192 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A +P PEIA AGRSNVGKSS++N + + RT + PG TQ +
Sbjct: 4 IRKAEFVTSAVDIKGYPELTGPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQML 63
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+++ + VDLPGYG+A +E+K W ++++EY S R +L+ V ++D +
Sbjct: 64 NFYRINDEWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQVVDIRHVPSVE 123
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E+ + + VV TK D + + QI ++L + + ++ S+++G
Sbjct: 124 DQEMHAFLRNRGIPVLVVATKADKISKGQWGKHLSQIAKALHIPDWHM--IITYSAETGL 181
Query: 181 GIRSLRTVLSKI 192
G+ L + +I
Sbjct: 182 GVPELHEAVEEI 193
>gi|346310782|ref|ZP_08852794.1| ribosome biogenesis GTP-binding protein YsxC [Collinsella tanakaei
YIT 12063]
gi|345897030|gb|EGX66961.1| ribosome biogenesis GTP-binding protein YsxC [Collinsella tanakaei
YIT 12063]
Length = 197
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
N F A+ +S P PE++F GRSNVGKSS++N L + G+V+ S PG T IN
Sbjct: 7 NLAHFVASYGKASQIPPSTCPEVSFVGRSNVGKSSIMNKLFGRKGLVKVSSTPGKTANIN 66
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
FF+ + VDLPGYGFA + +D W L+ +++ + S V L+D + D
Sbjct: 67 FFE-ADGIHFVDLPGYGFAQRSKAERDRWAVLIGDFLESERSFNLVVSLVDIRHDPSKLD 125
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E++ + ++ + V LTK D + AR+ I + L+ + + + SS++GAG
Sbjct: 126 FEMVDYLRENEFNFVVALTKADKLSRAQQARQLASIRKQLELP---AEQIFVTSSQTGAG 182
Query: 182 IRSLR 186
I L+
Sbjct: 183 IDELK 187
>gi|417935771|ref|ZP_12579088.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis X]
gi|343402680|gb|EGV15185.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis X]
Length = 195
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDKLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|343506693|ref|ZP_08744164.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio ichthyoenteri
ATCC 700023]
gi|343510742|ref|ZP_08747953.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio scophthalmi
LMG 19158]
gi|343516249|ref|ZP_08753290.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio sp. N418]
gi|342796669|gb|EGU32342.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio sp. N418]
gi|342800957|gb|EGU36451.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio scophthalmi
LMG 19158]
gi|342801916|gb|EGU37368.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio ichthyoenteri
ATCC 700023]
Length = 221
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VTEGCHIVDLPGYGFAQVPLELKKKWQKSLGEYLQQRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + ++I+E V+ V SS G G+
Sbjct: 131 IFWAVDSGIPVQVLLTKADKLKSGARKAQLLKIQEEAIGFGGTVK-VDAFSSLKGIGVDV 189
Query: 185 LRTVLSK 191
LR L +
Sbjct: 190 LRNKLDE 196
>gi|422882215|ref|ZP_16928671.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK355]
gi|332360756|gb|EGJ38564.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK355]
Length = 195
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVILVATKADKI 149
>gi|414564101|ref|YP_006043062.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847166|gb|AEJ25378.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 200
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 84/137 (61%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 18 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 77
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVD+PGYG+A + + W ++++EY++TR +L+ V L+D + D ++ +
Sbjct: 78 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEFL 137
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + +V TK D V
Sbjct: 138 KYYEIPVIIVATKADKV 154
>gi|227877366|ref|ZP_03995437.1| GTPase [Lactobacillus crispatus JV-V01]
gi|256842925|ref|ZP_05548413.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 125-2-CHN]
gi|256848700|ref|ZP_05554134.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US]
gi|262045892|ref|ZP_06018856.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus MV-3A-US]
gi|293381820|ref|ZP_06627792.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 214-1]
gi|312978252|ref|ZP_07789995.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus CTV-05]
gi|423317764|ref|ZP_17295661.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB049-03]
gi|423321102|ref|ZP_17298974.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB077-07]
gi|227863034|gb|EEJ70482.1| GTPase [Lactobacillus crispatus JV-V01]
gi|256614345|gb|EEU19546.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 125-2-CHN]
gi|256714239|gb|EEU29226.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US]
gi|260573851|gb|EEX30407.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus MV-3A-US]
gi|290921606|gb|EFD98636.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 214-1]
gi|310894771|gb|EFQ43842.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus CTV-05]
gi|405596425|gb|EKB69761.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB077-07]
gi|405597823|gb|EKB71073.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB049-03]
Length = 196
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 86/140 (61%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
+ +A +P +LPEIA AGRSNVGKSS++N L ++ + RTS +PG TQT+NF+K+
Sbjct: 8 YAVSAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYKV 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K LVD+PGYG+A ++ + + E++++Y+ TR +LK + +L+D++ D +
Sbjct: 68 NEKFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKDDIAMY 127
Query: 126 SLMERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 128 DYAQYLNIPILVVCTKMDKI 147
>gi|225855010|ref|YP_002736522.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae JJA]
gi|254783214|sp|C1CFF1.1|ENGB_STRZJ RecName: Full=Probable GTP-binding protein EngB
gi|225724050|gb|ACO19903.1| GTP-binding protein [Streptococcus pneumoniae JJA]
Length = 195
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHAPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|156972896|ref|YP_001443803.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio harveyi ATCC
BAA-1116]
gi|156524490|gb|ABU69576.1| hypothetical protein VIBHAR_00574 [Vibrio harveyi ATCC BAA-1116]
Length = 223
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 75 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 135 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 193
Query: 185 LRTVLS 190
LR L
Sbjct: 194 LRAKLD 199
>gi|345023379|ref|ZP_08786992.1| GTP-binding protein YsxC [Ornithinibacillus scapharcae TW25]
Length = 193
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A +P LPEIA AGRSNVGKSS +N L + + RTS KPG TQT+NF++
Sbjct: 7 EIVISAVSQKQYPNDQLPEIALAGRSNVGKSSFINKLINRKNLARTSSKPGKTQTLNFYR 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ VD+PGYG+A + ++ W ++++EY TR +LK V L+ D + D ++
Sbjct: 67 INDAFYFVDVPGYGYAKVSKTEREKWGKMMEEYFQTRQTLKAVLLITDIRHEPTRDDIQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKA----NNSLVQPVMMVSSKSGA 180
++ + V+ TK D I +RA I+ ++ L+ P SS++G
Sbjct: 127 YEFLKHFELPVVVIATKLDK---IPKGKRAQHIKRTINTLQMDKGDLILP---FSSETGE 180
Query: 181 G 181
G
Sbjct: 181 G 181
>gi|404377252|ref|ZP_10982389.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
1_1_43]
gi|226838512|gb|EEH70541.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
1_1_43]
Length = 210
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ + SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-IETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|295692730|ref|YP_003601340.1| GTP-binding protein engb [Lactobacillus crispatus ST1]
gi|295030836|emb|CBL50315.1| Probable GTP-binding protein engB [Lactobacillus crispatus ST1]
Length = 196
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 86/140 (61%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
+ +A +P +LPEIA AGRSNVGKSS++N L ++ + RTS +PG TQT+NF+K+
Sbjct: 8 YAVSAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYKV 67
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K LVD+PGYG+A ++ + + E++++Y+ TR +LK + +L+D++ D +
Sbjct: 68 NEKFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKDDIAMY 127
Query: 126 SLMERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 128 DYAQYLNIPILVVCTKMDKI 147
>gi|261366927|ref|ZP_05979810.1| ribosome biogenesis GTP-binding protein YsxC [Subdoligranulum
variabile DSM 15176]
gi|282571043|gb|EFB76578.1| ribosome biogenesis GTP-binding protein YsxC [Subdoligranulum
variabile DSM 15176]
Length = 200
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
N EF A+ +S P D PEI F+GRSNVGKSS++N L + + R S PG T TIN
Sbjct: 4 NNCEFLASYGLSRQLPDSDRPEIVFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTATIN 63
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLI---DTKWGVK 118
F+K T VDLPGYG+A + W+EL+ Y + VCLLI D +
Sbjct: 64 FYKADTAY-FVDLPGYGYAKVSNADRARWDELINSYFEAD---RAVCLLIQLLDCRHAPS 119
Query: 119 PRDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKS 178
D +++ + + LTK D + +A + EE L V + S+++
Sbjct: 120 ADDVQMLEYLHYHGIPFVAALTKADKLKKSQLAACQSEFEEICAPYGCL--GVYLTSAEN 177
Query: 179 GAGIRSLRTVL 189
G G+ +LR L
Sbjct: 178 GYGMDALRACL 188
>gi|225868472|ref|YP_002744420.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
gi|259645907|sp|C0MEW6.1|ENGB_STRS7 RecName: Full=Probable GTP-binding protein EngB
gi|225701748|emb|CAW99123.1| putative GTP-binding protein [Streptococcus equi subsp.
zooepidemicus]
Length = 199
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 84/137 (61%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVD+PGYG+A + + W ++++EY++TR +L+ V L+D + D ++ +
Sbjct: 77 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + +V TK D V
Sbjct: 137 KYYEIPVIIVATKADKV 153
>gi|261866835|ref|YP_003254757.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415770614|ref|ZP_11484957.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|416074686|ref|ZP_11584615.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC1398]
gi|416107974|ref|ZP_11590812.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. SCC2302]
gi|444344584|ref|ZP_21152810.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC4092]
gi|444346334|ref|ZP_21154302.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. AAS4A]
gi|261412167|gb|ACX81538.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348004598|gb|EGY45096.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. SCC2302]
gi|348006689|gb|EGY47084.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC1398]
gi|348656787|gb|EGY74394.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|443541786|gb|ELT52188.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. AAS4A]
gi|443543822|gb|ELT53946.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC4092]
Length = 204
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F ++ S P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++ + EY+ R L + +L+D + +K D
Sbjct: 69 LFEVEPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++I SQ ++LTK D + + +++ + E++
Sbjct: 129 QQMIEWAVASQLPVLLLLTKADKLSQSERSKQMKMVREAI 168
>gi|388602774|ref|ZP_10161170.1| GTP-binding protein YsxC [Vibrio campbellii DS40M4]
Length = 219
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|218708175|ref|YP_002415796.1| GTP-binding protein EngB [Vibrio splendidus LGP32]
gi|218321194|emb|CAV17144.1| Probable GTP-binding protein engB [Vibrio splendidus LGP32]
Length = 269
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN +T Q + +TS PG TQ IN FK
Sbjct: 61 HFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFK 120
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D ++
Sbjct: 121 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHPMKDLDQQM 180
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I K+ V V + SS G G+
Sbjct: 181 IYWAIDSRIPVQVLLTKADKLKSGARKAQLLKIRNDAKSFGGDV-AVDVFSSMKGIGVDQ 239
Query: 185 LRTVLSK 191
LR + +
Sbjct: 240 LRAKMDE 246
>gi|410659262|ref|YP_006911633.1| GTP-binding protein EngB [Dehalobacter sp. DCA]
gi|409021617|gb|AFV03648.1| GTP-binding protein EngB [Dehalobacter sp. DCA]
Length = 203
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K EF +A +P PE+A +GRSNVGKSS++N L + G+ + PG TQTINF
Sbjct: 5 KAEFMISAVKPQQYPEGTRPELAVSGRSNVGKSSLINKLVNRKGLAKVGKTPGKTQTINF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F + + LVDLPGYG+A +E + W ++++ Y R +LK V L+D + D
Sbjct: 65 FNINDEWYLVDLPGYGYAKVSQETRMQWGKMMQTYFRLRENLKGVIQLVDIRHQPTEEDR 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
++ +++ + VV TK D + + I ES K ++ + ++ SS+ G G+
Sbjct: 125 MMLEMLKVNNIPVLVVATKADKIARGQRPKYLKIIAESFKMSD--WKTIIPFSSEDGTGL 182
Query: 183 RSLRTVLSKI 192
+ L + I
Sbjct: 183 QELNQAMDDI 192
>gi|419891459|ref|ZP_14411544.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9570]
gi|388349888|gb|EIL15320.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9570]
Length = 210
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTDQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|420301001|ref|ZP_14803041.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09109]
gi|390804258|gb|EIO71234.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09109]
Length = 198
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 123 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|429106835|ref|ZP_19168704.1| GTP-binding protein EngB [Cronobacter malonaticus 681]
gi|426293558|emb|CCJ94817.1| GTP-binding protein EngB [Cronobacter malonaticus 681]
Length = 222
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 21 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 80
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 81 VADGKRLVDLPGYGYAEVPEEMKRKWKRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQM 140
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 141 IEWAVDSGIPVLVLLTKADKL--ASGARKAQLNMVREAVIAFNGDVQ-VEAFSSLKKTGV 197
Query: 183 RSLRTVLS 190
LR L
Sbjct: 198 DKLRIKLD 205
>gi|350529888|ref|ZP_08908829.1| GTP-binding protein YsxC [Vibrio rotiferianus DAT722]
Length = 219
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|401677320|ref|ZP_10809297.1| GTP-binding protein [Enterobacter sp. SST3]
gi|400215511|gb|EJO46420.1| GTP-binding protein [Enterobacter sp. SST3]
Length = 209
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IDWAVASDIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|339640244|ref|ZP_08661688.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 056 str. F0418]
gi|339453513|gb|EGP66128.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 056 str. F0418]
Length = 198
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVILVATKADKI 149
>gi|32035822|ref|ZP_00135658.1| COG0218: Predicted GTPase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|126207582|ref|YP_001052807.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|303250228|ref|ZP_07336429.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307251616|ref|ZP_07533522.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307260548|ref|ZP_07542241.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|126096374|gb|ABN73202.1| putative GTP-binding protein EngB [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302650939|gb|EFL81094.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860927|gb|EFM92934.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306869777|gb|EFN01561.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 206
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A P + EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ LVDLPGYG+A E++K W++ + EY+ R L+ V +L+D + +K D
Sbjct: 67 LFEVEPNCKLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLRGVVILMDIRHPLKDLD 126
Query: 122 HELISLMERSQTKYQVVLTKTDTV 145
++I +Q ++LTK D +
Sbjct: 127 QQMIEWAVSAQLPVLLLLTKADKL 150
>gi|77164078|ref|YP_342603.1| GTP-binding protein [Nitrosococcus oceani ATCC 19707]
gi|254435111|ref|ZP_05048618.1| GTPase, putative [Nitrosococcus oceani AFC27]
gi|119369224|sp|Q3JDM3.1|ENGB_NITOC RecName: Full=Probable GTP-binding protein EngB
gi|76882392|gb|ABA57073.1| cell division checkpoint GTPase YihA [Nitrosococcus oceani ATCC
19707]
gi|207088222|gb|EDZ65494.1| GTPase, putative [Nitrosococcus oceani AFC27]
Length = 200
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 84/141 (59%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K + +A S P + E+AFAGRSNVGKSS +NA+T G+ RTS PG TQ INF
Sbjct: 7 KAHYQGSAYTLSQLPPDEGMEVAFAGRSNVGKSSAINAITGIGGLARTSKTPGRTQMINF 66
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F+L + LVDLPGYG+A E VK W++ + Y+ R +L + L++D + +P D
Sbjct: 67 FQLDARRYLVDLPGYGYAKVPEAVKRQWQQTLSAYLEQRRALCGIVLVVDIRRLYQPFDL 126
Query: 123 ELISLMERSQTKYQVVLTKTD 143
+++ +++LTK+D
Sbjct: 127 QMLEWCRSRGLPVRILLTKSD 147
>gi|403070279|ref|ZP_10911611.1| GTP-binding protein YsxC [Oceanobacillus sp. Ndiop]
Length = 195
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K E +A +P LPEIA AGRSNVGKSS +N L + + RTS KPG TQT+NF
Sbjct: 5 KAEIVISAVSKKQYPGDMLPEIALAGRSNVGKSSFINKLINRKNLARTSSKPGKTQTLNF 64
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
+K+ VD+PGYG+A ++ K+ W +++EY TR +LK V L+ D + D
Sbjct: 65 YKINDIFYFVDVPGYGYAKVSKKEKEKWGPMMEEYFLTRENLKAVLLITDLRHEPTKDDL 124
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
+ ++ + + ++ TK D + A+ + +++ + ++ + ++ SS++G G
Sbjct: 125 RMYDFLKYNGVQVIIIGTKLDKIPKTKRAQHIKRTKQTFQMDSDDI--LIPFSSETGEGK 182
Query: 183 RSLRTVLSKI 192
+V++K+
Sbjct: 183 EESWSVITKL 192
>gi|401765844|ref|YP_006580851.1| GTP-binding protein YsxC [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400177378|gb|AFP72227.1| GTP-binding protein YsxC [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 209
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IDWAVASDIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|419718359|ref|ZP_14245681.1| ribosome biogenesis GTP-binding protein YsxC [Lachnoanaerobaculum
saburreum F0468]
gi|383305490|gb|EIC96853.1| ribosome biogenesis GTP-binding protein YsxC [Lachnoanaerobaculum
saburreum F0468]
Length = 197
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 91/161 (56%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E ++S FP PEI FAG+SNVGKSS++NAL + + RTS KPG TQTI
Sbjct: 3 IKKAELETVCGITSKFPDNKEPEIVFAGKSNVGKSSLINALMNRKSLARTSGKPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++K+ +L VDLPGYG+A A ++ W ++++ Y+ T +K + LLID +
Sbjct: 63 NYYKVNDELYFVDLPGYGYANANLATREKWGKMIERYLHTSKQIKCIFLLIDIRHEPGKN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
D ++ + + ++ TK D + +A+ + E L
Sbjct: 123 DKQMYDWIVYNGYSPVIIATKLDKLKRSQIAKCVKVVREGL 163
>gi|224044065|ref|XP_002189538.1| PREDICTED: GTP-binding protein 8 [Taeniopygia guttata]
Length = 238
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVV--RTSDKPGLTQT 59
+ +++ ++A P P LPE+ F GRSNVGKSS++ AL V R S PG T+
Sbjct: 40 HPIDYVSSAVRMDHAPPPALPEVCFIGRSNVGKSSLIRALFSLAPEVEVRVSKTPGHTKK 99
Query: 60 INFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
+NFFK+G LVD+PGYG+ ++ V E+V+ Y+ R +LKR LL+D G++
Sbjct: 100 MNFFKVGKYFTLVDMPGYGYRSPQDFV-----EMVEAYLQERHNLKRTFLLVDGVVGLQK 154
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKS 178
DH + ++E Y +VLTK D + + ++I+E +K + P + +VSS
Sbjct: 155 TDHIAVEMLEEFGIPYVMVLTKIDRASRGLLLKNVLEIQEFVKESTQGCFPQLFLVSSVE 214
Query: 179 GAGIRSLRTVLSKI 192
+G+ LR ++ +
Sbjct: 215 FSGVHLLRCFVAHV 228
>gi|71274790|ref|ZP_00651078.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon]
gi|170729963|ref|YP_001775396.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
M12]
gi|71164522|gb|EAO14236.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon]
gi|71729152|gb|EAO31274.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Ann-1]
gi|167964756|gb|ACA11766.1| GTP-binding protein [Xylella fastidiosa M12]
Length = 219
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 100/185 (54%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
++ +A P+ D E+AFAGRSN GKSS+LN LTRQ + R S PG TQ + +F
Sbjct: 25 KYLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFT 84
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A +E++ W+ + Y R +L+ + +++D + +K D ++
Sbjct: 85 VTPQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQM 144
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ + Q +LTK D + A+ ++ L + + + SSKS G+
Sbjct: 145 LAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHIDIQTFSSKSRQGVEQ 204
Query: 185 LRTVL 189
L TV+
Sbjct: 205 LHTVI 209
>gi|50914055|ref|YP_060027.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS10394]
gi|94994180|ref|YP_602278.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS10750]
gi|139473949|ref|YP_001128665.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes str. Manfredo]
gi|383479870|ref|YP_005388764.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS15252]
gi|383493785|ref|YP_005411461.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS1882]
gi|73919335|sp|Q5XCL9.1|ENGB_STRP6 RecName: Full=Probable GTP-binding protein EngB
gi|119369272|sp|Q1J740.1|ENGB_STRPF RecName: Full=Probable GTP-binding protein EngB
gi|166225987|sp|A2RF16.1|ENGB_STRPG RecName: Full=Probable GTP-binding protein EngB
gi|50903129|gb|AAT86844.1| YihA [Streptococcus pyogenes MGAS10394]
gi|94547688|gb|ABF37734.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10750]
gi|134272196|emb|CAM30442.1| putative GTP-binding protein [Streptococcus pyogenes str. Manfredo]
gi|378927860|gb|AFC66066.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS15252]
gi|378929513|gb|AFC67930.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS1882]
Length = 199
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDNK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 137 KYYDIPVIVVATKADKI 153
>gi|54310555|ref|YP_131575.1| ribosome biogenesis GTP-binding protein YsxC [Photobacterium
profundum SS9]
gi|46914998|emb|CAG21773.1| putative ATP/GTP-binding protein [Photobacterium profundum SS9]
Length = 251
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P EIAFAGRSN GKSS LN +T Q G+ RTS PG TQ IN F++
Sbjct: 35 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 94
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
L+DLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D ++I
Sbjct: 95 TQGCNLIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 154
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
S+ V+LTK D + + +++ ES K+ VQ + + SS G G+ +
Sbjct: 155 FWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSFGGDVQ-IELFSSLKGIGLDQV 213
Query: 186 RTVLS 190
R L
Sbjct: 214 RRKLD 218
>gi|225857194|ref|YP_002738705.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae P1031]
gi|444409709|ref|ZP_21206294.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0076]
gi|444412710|ref|ZP_21209029.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0153]
gi|444415162|ref|ZP_21211406.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0199]
gi|444422319|ref|ZP_21217978.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0446]
gi|254783215|sp|C1CLR7.1|ENGB_STRZP RecName: Full=Probable GTP-binding protein EngB
gi|225725684|gb|ACO21536.1| GTP-binding protein [Streptococcus pneumoniae P1031]
gi|444273949|gb|ELU79604.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0153]
gi|444278954|gb|ELU84373.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0076]
gi|444280591|gb|ELU85953.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0199]
gi|444288369|gb|ELU93265.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0446]
Length = 195
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +
Sbjct: 5 IHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLL 64
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NFF + K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D +
Sbjct: 65 NFFNIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSAD 124
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D ++ ++ + +V TK D +
Sbjct: 125 DVQMYEFLKYYEIPVIIVATKADKI 149
>gi|424048317|ref|ZP_17785871.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-03]
gi|408882952|gb|EKM21747.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-03]
Length = 219
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 131 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|225631246|ref|ZP_03787933.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591057|gb|EEH12252.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 197
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Query: 7 FAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL- 65
F A+ + + P PEIAFAGRSNVGKSS++N L R S KPG T+ INF+ +
Sbjct: 13 FGASDIKT-LPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMY 71
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
K LVDLPGYG+++A +E + L++ Y+ R +L+RV +LID+K G+K D + I
Sbjct: 72 NDKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLIDSKVGLKEIDKDFI 131
Query: 126 SLMERSQTKYQVVLTKTDTV 145
+ + +VLTK D V
Sbjct: 132 YWLIYNNINLNIVLTKIDKV 151
>gi|417514751|ref|ZP_12178473.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353632922|gb|EHC79865.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
Length = 211
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 15 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVEGK 74
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 75 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 134
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 135 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 191
Query: 188 VL 189
L
Sbjct: 192 KL 193
>gi|304407486|ref|ZP_07389138.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus
curdlanolyticus YK9]
gi|304343437|gb|EFM09279.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus
curdlanolyticus YK9]
Length = 195
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 102/181 (56%), Gaps = 2/181 (1%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P LPEIA AGRSNVGKSS++N + + + RTS +PG TQ +N++K
Sbjct: 7 EFIISAVRPDQYPEDALPEIALAGRSNVGKSSLINRMILRKNLARTSSQPGKTQQLNYYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ ++ VD PGYG+A + ++AW +++ ++ R LK V L++D + D +
Sbjct: 67 INEQIYFVDFPGYGYAKVSKTEREAWGRMIETFLKVREELKLVLLIVDIRHAPSKDDCLM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
++ + +V+TK D + ++ ++E+L+A+ + V+M SS+ G G
Sbjct: 127 YDWLKHYEIPICIVVTKADKIPKSKWDKQIKLVKETLQADPT--DKVIMFSSELGLGREQ 184
Query: 185 L 185
L
Sbjct: 185 L 185
>gi|217969951|ref|YP_002355185.1| ribosome biogenesis GTP-binding protein YsxC [Thauera sp. MZ1T]
gi|217507278|gb|ACK54289.1| GTP-binding protein HSR1-related [Thauera sp. MZ1T]
Length = 219
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S P P EIAFAGRSN GKSS +N L + S PG TQ INFF+L LVD
Sbjct: 17 SGLPPPSGAEIAFAGRSNAGKSSAINTLAGHVRLAYVSKTPGRTQLINFFRLNNGALLVD 76
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
LPGYG+A E+++ W L++ Y+ TR SL + L++D++ + P D +I S
Sbjct: 77 LPGYGYAAVPEKIRRQWSGLIETYLRTRESLIGLVLIMDSRHPLTPLDRNMIDWFAPSGR 136
Query: 134 KYQVVLTKTD 143
V+LTK+D
Sbjct: 137 PMHVLLTKSD 146
>gi|82703200|ref|YP_412766.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosospira
multiformis ATCC 25196]
gi|119369223|sp|Q2Y797.1|ENGB_NITMU RecName: Full=Probable GTP-binding protein EngB
gi|82411265|gb|ABB75374.1| cell division checkpoint GTPase YihA [Nitrosospira multiformis ATCC
25196]
Length = 235
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 79/138 (57%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F+ P P EIAFAGRSN GKSS +N L + + S PG TQ +NFF+L
Sbjct: 9 FYTTVNELRDLPPPVGVEIAFAGRSNAGKSSAINTLANRNRLAFVSKTPGRTQHLNFFRL 68
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
G LVDLPGYG+A EV+ WE L+ Y+ TR SL + L++D + + P D +++
Sbjct: 69 GNDRFLVDLPGYGYAKVPAEVRQHWERLLGTYLQTRQSLHGMVLIMDARHPLTPLDRQML 128
Query: 126 SLMERSQTKYQVVLTKTD 143
+ ++ V+LTK+D
Sbjct: 129 AWFAPTKKAVHVLLTKSD 146
>gi|119369229|sp|Q6LLQ5.2|ENGB_PHOPR RecName: Full=Probable GTP-binding protein EngB
Length = 233
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P EIAFAGRSN GKSS LN +T Q G+ RTS PG TQ IN F++
Sbjct: 17 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 76
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
L+DLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D ++I
Sbjct: 77 TQGCNLIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 136
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
S+ V+LTK D + + +++ ES K+ VQ + + SS G G+ +
Sbjct: 137 FWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSFGGDVQ-IELFSSLKGIGLDQV 195
Query: 186 RTVLS 190
R L
Sbjct: 196 RRKLD 200
>gi|254228534|ref|ZP_04921959.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25]
gi|151938916|gb|EDN57749.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25]
Length = 223
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 75 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + +++ + ++ V V + SS G G+
Sbjct: 135 IFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETFGGDVS-VDVFSSLKGLGVDQ 193
Query: 185 LRTVLS 190
LR L
Sbjct: 194 LRAKLD 199
>gi|407692929|ref|YP_006817718.1| GTP-binding protein YsxC [Actinobacillus suis H91-0380]
gi|407388986|gb|AFU19479.1| GTP-binding protein YsxC [Actinobacillus suis H91-0380]
Length = 206
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A P + EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ LVDLPGYG+A E++K W++ + EY+ R L+ V +L+D + +K D
Sbjct: 67 LFEVEPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLD 126
Query: 122 HELISLMERSQTKYQVVLTKTDTV 145
++I +Q ++LTK D +
Sbjct: 127 QQMIEWAVSAQLPVLLLLTKADKL 150
>gi|404448256|ref|ZP_11013249.1| GTP-binding protein engB [Indibacter alkaliphilus LW1]
gi|403765877|gb|EJZ26752.1| GTP-binding protein engB [Indibacter alkaliphilus LW1]
Length = 202
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 78/127 (61%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
P P PE AF GRSNVGKSS++N LT + +TS KPG TQ IN F + +VDLPG
Sbjct: 18 PEPTKPEFAFIGRSNVGKSSLINMLTNNKNLAKTSGKPGKTQLINHFVINGNWYMVDLPG 77
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YGFA + +K WE+++ Y++ R +L +C+L+D++ + D E I+ + +
Sbjct: 78 YGFAKVSKGIKSTWEKMISNYLTNRDNLVALCVLVDSRLEPQKIDLEFITWCGENDIPFI 137
Query: 137 VVLTKTD 143
++ TK+D
Sbjct: 138 LIFTKSD 144
>gi|295397567|ref|ZP_06807646.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans
ATCC 11563]
gi|294974191|gb|EFG49939.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans
ATCC 11563]
Length = 201
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 85/145 (58%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ +EF +A +PAP +PEIA AGRSNVGKSS +N + + + RTS KPG TQ +
Sbjct: 3 VHNVEFLISAVRPEQYPAPIIPEIALAGRSNVGKSSFINTMINRKKLARTSSKPGKTQQL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++++ VD+PGYG+A + K W E+++ Y +TR +L L++D +
Sbjct: 63 NYYQIEDLFYFVDVPGYGYARVSKTEKAKWGEMLETYFATRENLALALLIVDFRHKPTKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D ++ M+ Y V+ TKTD +
Sbjct: 123 DIQMKEFMDYHGVPYFVIATKTDKI 147
>gi|262039420|ref|ZP_06012727.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
goodfellowii F0264]
gi|261746556|gb|EEY34088.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
goodfellowii F0264]
Length = 198
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 1/168 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF +A +P E +F GRSNVGKSS++N+LT + + RTS PG TQ I
Sbjct: 3 IKKSEFVKSAVYEKDYPEKKGIEFSFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N+F + +++ VDLPGYGFA E VK W ++ Y+ + K V LL+D +
Sbjct: 63 NYFLIDSEIYFVDLPGYGFAKVPEAVKRNWGTTIETYLKSERD-KVVFLLLDLRRIPSGE 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLV 168
D E++ +E +Y ++ TK+D + + A++ +I++ L+ NN V
Sbjct: 122 DMEMLRWLEHYNIEYYIIFTKSDKLSNNEKAKQLKEIKKKLEFNNEDV 169
>gi|437833714|ref|ZP_20844795.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435302021|gb|ELO78013.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 211
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 15 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVDGK 74
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 75 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 134
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 135 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 191
Query: 188 VLS 190
L
Sbjct: 192 KLD 194
>gi|322515140|ref|ZP_08068143.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae
ATCC 25976]
gi|322118854|gb|EFX91044.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae
ATCC 25976]
Length = 206
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A P + EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ LVDLPGYG+A E++K W++ + EY+ R L+ V +L+D + +K D
Sbjct: 67 LFEVEPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLD 126
Query: 122 HELISLMERSQTKYQVVLTKTDTV 145
++I +Q ++LTK D +
Sbjct: 127 QQMIEWAVSTQLPVLLLLTKADKL 150
>gi|375003861|ref|ZP_09728198.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353073936|gb|EHB39699.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 198
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVDGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 123 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|333929794|ref|YP_004503373.1| GTP-binding protein engB [Serratia sp. AS12]
gi|333934747|ref|YP_004508325.1| GTP-binding protein engB [Serratia plymuthica AS9]
gi|386331617|ref|YP_006027787.1| GTP-binding protein engB [Serratia sp. AS13]
gi|333476354|gb|AEF48064.1| GTP-binding protein engB [Serratia plymuthica AS9]
gi|333493854|gb|AEF53016.1| GTP-binding protein engB [Serratia sp. AS12]
gi|333963950|gb|AEG30723.1| GTP-binding protein engB [Serratia sp. AS13]
Length = 216
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 80/139 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F+
Sbjct: 12 HFVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 71
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A EE+K W+ + EY+ R LK + +L+D + +K D ++
Sbjct: 72 VEEGIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHPLKDLDQQM 131
Query: 125 ISLMERSQTKYQVVLTKTD 143
I T V+LTK D
Sbjct: 132 IQWAVDVGTPVLVLLTKAD 150
>gi|269959442|ref|ZP_06173825.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|269835879|gb|EEZ89955.1| GTP-binding protein [Vibrio harveyi 1DA3]
Length = 223
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 75 VEEGCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S+ QV+LTK D + + ++I + ++ V V + SS G G+
Sbjct: 135 IFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVS-VDVFSSLKGLGVDQ 193
Query: 185 LRTVLS 190
LR L
Sbjct: 194 LRAKLD 199
>gi|165975551|ref|YP_001651144.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303251917|ref|ZP_07338088.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307244896|ref|ZP_07526994.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307247073|ref|ZP_07529126.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307249295|ref|ZP_07531290.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307258306|ref|ZP_07540048.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262677|ref|ZP_07544306.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165875652|gb|ABY68700.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|302649347|gb|EFL79532.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306854218|gb|EFM86425.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306856442|gb|EFM88592.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306858694|gb|EFM90755.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306867645|gb|EFM99491.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306872005|gb|EFN03720.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 206
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A P + EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ LVDLPGYG+A E++K W++ + EY+ R L+ V +L+D + +K D
Sbjct: 67 LFEVEPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLD 126
Query: 122 HELISLMERSQTKYQVVLTKTDTV 145
++I +Q ++LTK D +
Sbjct: 127 QQMIEWAVSAQLPVLLLLTKADKL 150
>gi|90414662|ref|ZP_01222633.1| GTP-binding protein [Photobacterium profundum 3TCK]
gi|90324204|gb|EAS40779.1| GTP-binding protein [Photobacterium profundum 3TCK]
Length = 228
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P EIAFAGRSN GKSS LN +T Q G+ RTS PG TQ IN F++
Sbjct: 12 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 71
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
L+DLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D ++I
Sbjct: 72 TQGCNLIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
S+ V+LTK D + + +++ ES K+ VQ + + SS G G+ +
Sbjct: 132 FWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSFGGDVQ-IELFSSLKGIGLDQV 190
Query: 186 RTVLS 190
R L
Sbjct: 191 RRKLD 195
>gi|86140633|ref|ZP_01059192.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217]
gi|85832575|gb|EAQ51024.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217]
Length = 202
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + + P +PE AF GRSNVGKSS++N LT + + +TS +PG TQ IN F
Sbjct: 7 EFLVSNSNVAKCPKNKMPEYAFIGRSNVGKSSLINMLTDRKNLAKTSGRPGKTQLINHFV 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A ++VK +++ + +Y R L +LID + +P D E
Sbjct: 67 INQTWYLVDLPGYGYARVSKKVKKEFQKFITQYFEEREQLVSAFVLIDCRHEPQPIDREF 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
+ + Q + ++ TK D + P + R ++ L A P +SS + +
Sbjct: 127 MQYLGEKQIPFSIIFTKADKLKPKALERNIENYKQELLAGAWAEMPNYFISSATNS 182
>gi|392981359|ref|YP_006479947.1| GTP-binding protein YsxC [Enterobacter cloacae subsp. dissolvens
SDM]
gi|392327292|gb|AFM62245.1| GTP-binding protein YsxC [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 209
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IDWAVASDIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|300113290|ref|YP_003759865.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosococcus
watsonii C-113]
gi|299539227|gb|ADJ27544.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosococcus
watsonii C-113]
Length = 200
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K + +A S P E+AFAGRSNVGKSS +N +T G+ RTS PG TQ INF
Sbjct: 7 KAHYQGSAYTLSQLPPDKGMEVAFAGRSNVGKSSAINTITGIGGLARTSKTPGRTQMINF 66
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F+L + LVDLPGYG+A E VK W++ + Y+ R +L + L++D + +P D
Sbjct: 67 FQLDARRYLVDLPGYGYAKVPEAVKQQWQQTLSAYLEQRRALCGIVLVVDIRRLYQPFDL 126
Query: 123 ELISLMERSQTKYQVVLTKTD 143
++++ + +++LTK+D
Sbjct: 127 QMLAWCRSRELPVRILLTKSD 147
>gi|260583671|ref|ZP_05851419.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
elegans ATCC 700633]
gi|260158297|gb|EEW93365.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
elegans ATCC 700633]
Length = 197
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 103/179 (57%), Gaps = 4/179 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A + +P EIA +GRSNVGKSS +N L ++ + RTS KPG TQT+NF+
Sbjct: 7 EFTISAVGPNQYPTDQKVEIALSGRSNVGKSSFINRLIQRKSLARTSSKPGKTQTLNFYH 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ VD+PGYG+A ++ ++ W ++++EY++TR +L+ V +L+D + D ++
Sbjct: 67 INDLFYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRENLELVLILVDFRHEPSTEDVQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL-KANNSLVQPVMMVSSKSGAGI 182
+E + Y++++TK D + + QI ++ K L + SS++G G+
Sbjct: 127 REFLEYYEIPYRIIMTKCDKIPRGKWNKHVSQIRKAFGKPPEEL---FLTFSSETGEGV 182
>gi|205354414|ref|YP_002228215.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|207859194|ref|YP_002245845.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|205274195|emb|CAR39213.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206710997|emb|CAR35365.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 199
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 4 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVEGK 63
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 64 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 123
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 124 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 180
Query: 188 VLS 190
L
Sbjct: 181 KLD 183
>gi|366166715|ref|ZP_09466470.1| GTP-binding protein YsxC [Acetivibrio cellulolyticus CD2]
Length = 193
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N F A +P D+PE+ F GRSNVGKSS++NAL + + R + KPG T+ I
Sbjct: 3 INNARFEKGAVKPEQYPDNDIPEVTFVGRSNVGKSSLINALLNRKSLARIASKPGKTREI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + L VDLPGYG+A +++K AW E ++ Y++ LK V +L+D +
Sbjct: 63 NFYNIDDVLYFVDLPGYGYAKVSKDIKSAWGESIETYLNESKKLKLVVMLVDIRHSPSED 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
D + + S + VV TK D + V R I +L+
Sbjct: 123 DQMMSKWLTSSSLPFIVVATKKDKIPRSKVKERLSDISNTLE 164
>gi|386824732|ref|ZP_10111862.1| GTP-binding protein YsxC [Serratia plymuthica PRI-2C]
gi|386378409|gb|EIJ19216.1| GTP-binding protein YsxC [Serratia plymuthica PRI-2C]
Length = 215
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 80/139 (57%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F+
Sbjct: 12 HFVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 71
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + LVDLPGYG+A EE+K W+ + EY+ R LK + +L+D + +K D ++
Sbjct: 72 VEEGIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHPLKDLDQQM 131
Query: 125 ISLMERSQTKYQVVLTKTD 143
I T V+LTK D
Sbjct: 132 IQWAVDVGTPVLVLLTKAD 150
>gi|295094046|emb|CBK83137.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus sp.
ART55/1]
Length = 198
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 87/157 (55%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E ++S P DLPEIAFAG+SNVGKSS++N L + + RTS +PG TQTINF+
Sbjct: 7 ELETVCGITSKLPDNDLPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTINFYN 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VDLPGYG+A E++ W ++++ Y+ LK+V LLID + D +
Sbjct: 67 VNKNLYFVDLPGYGYAKVSVEIRAKWGKMIERYLHGSPQLKKVFLLIDIRHVPSENDCMM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
+ + + ++ TK D + V + I E L
Sbjct: 127 YDWIVDNGYEPVIICTKLDKIKRSQVQKNLKLIREKL 163
>gi|262392690|ref|YP_003284544.1| GTP-binding protein EngB [Vibrio sp. Ex25]
gi|451972455|ref|ZP_21925663.1| GTP-binding protein EngB [Vibrio alginolyticus E0666]
gi|262336284|gb|ACY50079.1| GTP-binding protein EngB [Vibrio sp. Ex25]
gi|451931665|gb|EMD79351.1| GTP-binding protein EngB [Vibrio alginolyticus E0666]
Length = 219
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 71 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + +++ + ++ V V + SS G G+
Sbjct: 131 IFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETFGGDVS-VDVFSSLKGLGVDQ 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRAKLD 195
>gi|331675323|ref|ZP_08376073.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA280]
gi|331685601|ref|ZP_08386184.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H299]
gi|12518743|gb|AAG59053.1|AE005617_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|331067383|gb|EGI38788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA280]
gi|331077072|gb|EGI48287.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H299]
Length = 199
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 4 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 63
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 64 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 123
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 124 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 180
Query: 188 VLS 190
L
Sbjct: 181 KLD 183
>gi|15901411|ref|NP_346015.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae TIGR4]
gi|111658474|ref|ZP_01409147.1| hypothetical protein SpneT_02000374 [Streptococcus pneumoniae
TIGR4]
gi|116515393|ref|YP_816858.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae D39]
gi|148984920|ref|ZP_01818173.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71]
gi|148988622|ref|ZP_01820055.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73]
gi|148990171|ref|ZP_01821402.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|148993406|ref|ZP_01822923.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|148997364|ref|ZP_01824969.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|149003199|ref|ZP_01828095.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|149007516|ref|ZP_01831151.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|149007879|ref|ZP_01831466.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|149012699|ref|ZP_01833675.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|149022038|ref|ZP_01836000.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72]
gi|168483553|ref|ZP_02708505.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|168486831|ref|ZP_02711339.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|168488709|ref|ZP_02712908.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|168491538|ref|ZP_02715681.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|168493473|ref|ZP_02717616.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|168575234|ref|ZP_02721197.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|194397246|ref|YP_002038200.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae G54]
gi|225859325|ref|YP_002740835.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 70585]
gi|237650251|ref|ZP_04524503.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974]
gi|237820866|ref|ZP_04596711.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974M2]
gi|298230527|ref|ZP_06964208.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298255217|ref|ZP_06978803.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298503306|ref|YP_003725246.1| GTPase [Streptococcus pneumoniae TCH8431/19A]
gi|303255353|ref|ZP_07341423.1| GTPase EngB [Streptococcus pneumoniae BS455]
gi|303260195|ref|ZP_07346167.1| GTPase EngB [Streptococcus pneumoniae SP-BS293]
gi|303262586|ref|ZP_07348527.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292]
gi|303264988|ref|ZP_07350903.1| GTPase EngB [Streptococcus pneumoniae BS397]
gi|303266451|ref|ZP_07352339.1| GTPase EngB [Streptococcus pneumoniae BS457]
gi|303269033|ref|ZP_07354815.1| GTPase EngB [Streptococcus pneumoniae BS458]
gi|307068211|ref|YP_003877177.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|307127778|ref|YP_003879809.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|387626791|ref|YP_006062967.1| putative GTP-binding protein [Streptococcus pneumoniae INV104]
gi|387757810|ref|YP_006064789.1| putative GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|387759697|ref|YP_006066675.1| putative GTP-binding protein [Streptococcus pneumoniae INV200]
gi|410476945|ref|YP_006743704.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae gamPNI0373]
gi|417313048|ref|ZP_12099760.1| hypothetical protein SPAR5_1446 [Streptococcus pneumoniae GA04375]
gi|417677297|ref|ZP_12326704.1| hypothetical protein SPAR148_1498 [Streptococcus pneumoniae
GA17545]
gi|417679550|ref|ZP_12328946.1| hypothetical protein SPAR50_1585 [Streptococcus pneumoniae GA17570]
gi|417687015|ref|ZP_12336289.1| hypothetical protein SPAR68_1577 [Streptococcus pneumoniae GA41301]
gi|417694460|ref|ZP_12343647.1| hypothetical protein SPAR120_1514 [Streptococcus pneumoniae
GA47901]
gi|417696734|ref|ZP_12345912.1| hypothetical protein SPAR93_1607 [Streptococcus pneumoniae GA47368]
gi|417698966|ref|ZP_12348137.1| hypothetical protein SPAR69_1522 [Streptococcus pneumoniae GA41317]
gi|418074403|ref|ZP_12711656.1| hypothetical protein SPAR19_1546 [Streptococcus pneumoniae GA11184]
gi|418076799|ref|ZP_12714032.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47502]
gi|418079009|ref|ZP_12716231.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
4027-06]
gi|418081202|ref|ZP_12718412.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6735-05]
gi|418083372|ref|ZP_12720569.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44288]
gi|418085563|ref|ZP_12722742.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47281]
gi|418087258|ref|ZP_12724427.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47033]
gi|418089933|ref|ZP_12727087.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA43265]
gi|418092175|ref|ZP_12729316.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44452]
gi|418094358|ref|ZP_12731485.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49138]
gi|418096668|ref|ZP_12733779.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA16531]
gi|418098902|ref|ZP_12735999.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6901-05]
gi|418101028|ref|ZP_12738112.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
7286-06]
gi|418103270|ref|ZP_12740342.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP070]
gi|418105681|ref|ZP_12742737.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44500]
gi|418107999|ref|ZP_12745036.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41410]
gi|418110523|ref|ZP_12747544.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49447]
gi|418112913|ref|ZP_12749913.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41538]
gi|418115098|ref|ZP_12752084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5787-06]
gi|418117255|ref|ZP_12754224.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6963-05]
gi|418119013|ref|ZP_12755970.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA18523]
gi|418121640|ref|ZP_12758583.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44194]
gi|418126234|ref|ZP_12763140.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44511]
gi|418130727|ref|ZP_12767610.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07643]
gi|418133018|ref|ZP_12769889.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11304]
gi|418134776|ref|ZP_12771633.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11426]
gi|418139902|ref|ZP_12776727.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA13338]
gi|418142081|ref|ZP_12778894.1| hypothetical protein SPAR30_1467 [Streptococcus pneumoniae GA13455]
gi|418144531|ref|ZP_12781326.1| hypothetical protein SPAR31_1728 [Streptococcus pneumoniae GA13494]
gi|418146827|ref|ZP_12783605.1| hypothetical protein SPAR32_1600 [Streptococcus pneumoniae GA13637]
gi|418148947|ref|ZP_12785709.1| hypothetical protein SPAR34_1438 [Streptococcus pneumoniae GA13856]
gi|418151076|ref|ZP_12787822.1| hypothetical protein SPAR37_1488 [Streptococcus pneumoniae GA14798]
gi|418153303|ref|ZP_12790041.1| hypothetical protein SPAR38_1546 [Streptococcus pneumoniae GA16121]
gi|418155551|ref|ZP_12792279.1| hypothetical protein SPAR39_1513 [Streptococcus pneumoniae GA16242]
gi|418157857|ref|ZP_12794573.1| hypothetical protein SPAR41_1639 [Streptococcus pneumoniae GA16833]
gi|418160272|ref|ZP_12796971.1| hypothetical protein SPAR43_1612 [Streptococcus pneumoniae GA17227]
gi|418162600|ref|ZP_12799282.1| hypothetical protein SPAR49_1590 [Streptococcus pneumoniae GA17328]
gi|418164864|ref|ZP_12801533.1| hypothetical protein SPAR45_1500 [Streptococcus pneumoniae GA17371]
gi|418167174|ref|ZP_12803829.1| hypothetical protein SPAR52_1598 [Streptococcus pneumoniae GA17971]
gi|418169571|ref|ZP_12806213.1| hypothetical protein SPAR56_1665 [Streptococcus pneumoniae GA19077]
gi|418171705|ref|ZP_12808329.1| hypothetical protein SPAR58_1489 [Streptococcus pneumoniae GA19451]
gi|418173968|ref|ZP_12810580.1| hypothetical protein SPAR67_1573 [Streptococcus pneumoniae GA41277]
gi|418176366|ref|ZP_12812957.1| hypothetical protein SPAR71_1600 [Streptococcus pneumoniae GA41437]
gi|418180931|ref|ZP_12817500.1| hypothetical protein SPAR74_1541 [Streptococcus pneumoniae GA41688]
gi|418182469|ref|ZP_12819030.1| hypothetical protein SPAR78_0872 [Streptococcus pneumoniae GA43380]
gi|418185307|ref|ZP_12821848.1| hypothetical protein SPAR91_1495 [Streptococcus pneumoniae GA47283]
gi|418187561|ref|ZP_12824084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47360]
gi|418189810|ref|ZP_12826322.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47373]
gi|418192023|ref|ZP_12828525.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47388]
gi|418194153|ref|ZP_12830642.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47439]
gi|418196198|ref|ZP_12832676.1| hypothetical protein SPAR103_1395 [Streptococcus pneumoniae
GA47688]
gi|418198397|ref|ZP_12834856.1| hypothetical protein SPAR106_1485 [Streptococcus pneumoniae
GA47778]
gi|418200641|ref|ZP_12837084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47976]
gi|418202793|ref|ZP_12839222.1| hypothetical protein SPAR115_1513 [Streptococcus pneumoniae
GA52306]
gi|418214778|ref|ZP_12841512.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA54644]
gi|418217021|ref|ZP_12843701.1| hypothetical protein SPAR147_1492 [Streptococcus pneumoniae
Netherlands15B-37]
gi|418219290|ref|ZP_12845955.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP127]
gi|418223770|ref|ZP_12850410.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5185-06]
gi|418225949|ref|ZP_12852577.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP112]
gi|418228076|ref|ZP_12854693.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
3063-00]
gi|418230354|ref|ZP_12856953.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
EU-NP01]
gi|418232570|ref|ZP_12859157.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07228]
gi|418234785|ref|ZP_12861361.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA08780]
gi|418237028|ref|ZP_12863595.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA19690]
gi|418239107|ref|ZP_12865658.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419423343|ref|ZP_13963556.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43264]
gi|419425517|ref|ZP_13965713.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7533-05]
gi|419427630|ref|ZP_13967811.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 5652-06]
gi|419429770|ref|ZP_13969934.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA11856]
gi|419431960|ref|ZP_13972093.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP05]
gi|419433857|ref|ZP_13973975.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40183]
gi|419436362|ref|ZP_13976450.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 8190-05]
gi|419438607|ref|ZP_13978675.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13499]
gi|419442928|ref|ZP_13982955.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13224]
gi|419445082|ref|ZP_13985097.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19923]
gi|419447227|ref|ZP_13987232.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7879-04]
gi|419449360|ref|ZP_13989356.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 4075-00]
gi|419451042|ref|ZP_13991028.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP02]
gi|419453755|ref|ZP_13993725.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP03]
gi|419455934|ref|ZP_13995891.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP04]
gi|419458171|ref|ZP_13998113.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02254]
gi|419460378|ref|ZP_14000306.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02270]
gi|419462728|ref|ZP_14002631.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02714]
gi|419465217|ref|ZP_14005108.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04175]
gi|419467180|ref|ZP_14007061.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05248]
gi|419469384|ref|ZP_14009252.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA06083]
gi|419471470|ref|ZP_14011329.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA07914]
gi|419475911|ref|ZP_14015748.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14688]
gi|419478220|ref|ZP_14018044.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA18068]
gi|419480418|ref|ZP_14020223.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19101]
gi|419482624|ref|ZP_14022411.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40563]
gi|419484815|ref|ZP_14024590.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43257]
gi|419487055|ref|ZP_14026817.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44128]
gi|419489467|ref|ZP_14029216.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44386]
gi|419491485|ref|ZP_14031223.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47179]
gi|419493698|ref|ZP_14033423.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47210]
gi|419495756|ref|ZP_14035473.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47461]
gi|419497946|ref|ZP_14037653.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47522]
gi|419500118|ref|ZP_14039812.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47597]
gi|419502222|ref|ZP_14041906.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47628]
gi|419504323|ref|ZP_14043991.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47760]
gi|419506467|ref|ZP_14046128.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49194]
gi|419508657|ref|ZP_14048309.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49542]
gi|419510831|ref|ZP_14050472.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae NP141]
gi|419512964|ref|ZP_14052596.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05578]
gi|419515089|ref|ZP_14054714.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae England14-9]
gi|419517168|ref|ZP_14056784.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02506]
gi|419519283|ref|ZP_14058889.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA08825]
gi|419521499|ref|ZP_14061094.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05245]
gi|419524153|ref|ZP_14063728.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13723]
gi|419526280|ref|ZP_14065839.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14373]
gi|419527907|ref|ZP_14067450.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17719]
gi|419530492|ref|ZP_14070019.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40028]
gi|419532785|ref|ZP_14072300.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47794]
gi|419535035|ref|ZP_14074534.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17457]
gi|421207018|ref|ZP_15664070.1| hypothetical protein AMCSP20_001585 [Streptococcus pneumoniae
2090008]
gi|421209350|ref|ZP_15666363.1| hypothetical protein AMCSP11_001537 [Streptococcus pneumoniae
2070005]
gi|421211457|ref|ZP_15668439.1| hypothetical protein AMCSP03_001477 [Streptococcus pneumoniae
2070035]
gi|421215680|ref|ZP_15672601.1| hypothetical protein AMCSP04_001398 [Streptococcus pneumoniae
2070109]
gi|421221117|ref|ZP_15677950.1| hypothetical protein AMCSP05_001865 [Streptococcus pneumoniae
2070425]
gi|421222523|ref|ZP_15679314.1| hypothetical protein AMCSP14_000949 [Streptococcus pneumoniae
2070531]
gi|421225410|ref|ZP_15682148.1| hypothetical protein AMCSP06_001547 [Streptococcus pneumoniae
2070768]
gi|421227753|ref|ZP_15684455.1| hypothetical protein AMCSP08_001571 [Streptococcus pneumoniae
2072047]
gi|421230192|ref|ZP_15686856.1| hypothetical protein AMCSP01_001562 [Streptococcus pneumoniae
2061376]
gi|421232287|ref|ZP_15688928.1| hypothetical protein AMCSP16_001445 [Streptococcus pneumoniae
2080076]
gi|421234474|ref|ZP_15691092.1| hypothetical protein AMCSP02_001475 [Streptococcus pneumoniae
2061617]
gi|421238206|ref|ZP_15694776.1| hypothetical protein AMCSP15_000767 [Streptococcus pneumoniae
2071247]
gi|421241046|ref|ZP_15697591.1| hypothetical protein AMCSP17_001449 [Streptococcus pneumoniae
2080913]
gi|421243490|ref|ZP_15700005.1| hypothetical protein AMCSP09_001719 [Streptococcus pneumoniae
2081074]
gi|421245424|ref|ZP_15701922.1| hypothetical protein AMCSP10_001398 [Streptococcus pneumoniae
2081685]
gi|421247808|ref|ZP_15704290.1| hypothetical protein AMCSP18_001761 [Streptococcus pneumoniae
2082170]
gi|421249799|ref|ZP_15706256.1| hypothetical protein AMCSP19_001424 [Streptococcus pneumoniae
2082239]
gi|421266573|ref|ZP_15717453.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR27]
gi|421268735|ref|ZP_15719604.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR95]
gi|421270991|ref|ZP_15721845.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR48]
gi|421273125|ref|ZP_15723966.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR55]
gi|421275297|ref|ZP_15726126.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA52612]
gi|421279362|ref|ZP_15730168.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17301]
gi|421281567|ref|ZP_15732364.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04672]
gi|421283708|ref|ZP_15734494.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04216]
gi|421286028|ref|ZP_15736804.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60190]
gi|421287842|ref|ZP_15738605.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58771]
gi|421290137|ref|ZP_15740887.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA54354]
gi|421292461|ref|ZP_15743195.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56348]
gi|421294864|ref|ZP_15745585.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56113]
gi|421296412|ref|ZP_15747121.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58581]
gi|421299034|ref|ZP_15749721.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60080]
gi|421301442|ref|ZP_15752112.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19998]
gi|421302958|ref|ZP_15753622.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17484]
gi|421305527|ref|ZP_15756181.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62331]
gi|421307782|ref|ZP_15758424.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60132]
gi|421309979|ref|ZP_15760604.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62681]
gi|421314460|ref|ZP_15765047.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47562]
gi|444382588|ref|ZP_21180789.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8106]
gi|444386279|ref|ZP_21184340.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8203]
gi|444387789|ref|ZP_21185805.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS125219]
gi|444389333|ref|ZP_21187250.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS70012]
gi|444391724|ref|ZP_21189534.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS81218]
gi|444394622|ref|ZP_21192173.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0002]
gi|444398012|ref|ZP_21195495.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0006]
gi|444398919|ref|ZP_21196394.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0007]
gi|444401406|ref|ZP_21198593.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0008]
gi|444404146|ref|ZP_21201108.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0009]
gi|444407631|ref|ZP_21204298.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0010]
gi|444418127|ref|ZP_21214120.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0360]
gi|444420563|ref|ZP_21216335.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0427]
gi|54037058|sp|P64073.1|ENGB_STRR6 RecName: Full=Probable GTP-binding protein EngB
gi|54040981|sp|P64072.1|ENGB_STRPN RecName: Full=Probable GTP-binding protein EngB
gi|122278296|sp|Q04JI0.1|ENGB_STRP2 RecName: Full=Probable GTP-binding protein EngB
gi|238690842|sp|B5E6L1.1|ENGB_STRP4 RecName: Full=Probable GTP-binding protein EngB
gi|254783211|sp|C1C8F9.1|ENGB_STRP7 RecName: Full=Probable GTP-binding protein EngB
gi|14973059|gb|AAK75655.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
gi|116075969|gb|ABJ53689.1| GTP-binding protein [Streptococcus pneumoniae D39]
gi|147756419|gb|EDK63460.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|147758659|gb|EDK65656.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|147760606|gb|EDK67580.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147760875|gb|EDK67845.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147763299|gb|EDK70237.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|147922942|gb|EDK74058.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71]
gi|147924438|gb|EDK75527.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|147925823|gb|EDK76898.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73]
gi|147927961|gb|EDK78981.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|147929882|gb|EDK80871.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72]
gi|172043175|gb|EDT51221.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|183570230|gb|EDT90758.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|183572689|gb|EDT93217.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|183574254|gb|EDT94782.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|183576321|gb|EDT96849.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|183578703|gb|EDT99231.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|194356913|gb|ACF55361.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae G54]
gi|225720438|gb|ACO16292.1| GTP-binding protein [Streptococcus pneumoniae 70585]
gi|298238901|gb|ADI70032.1| GTPase [Streptococcus pneumoniae TCH8431/19A]
gi|301794577|emb|CBW37021.1| putative GTP-binding protein [Streptococcus pneumoniae INV104]
gi|301800399|emb|CBW33030.1| putative GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|301802286|emb|CBW35038.1| putative GTP-binding protein [Streptococcus pneumoniae INV200]
gi|302597721|gb|EFL64797.1| GTPase EngB [Streptococcus pneumoniae BS455]
gi|302636303|gb|EFL66797.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292]
gi|302638692|gb|EFL69155.1| GTPase EngB [Streptococcus pneumoniae SP-BS293]
gi|302641423|gb|EFL71788.1| GTPase EngB [Streptococcus pneumoniae BS458]
gi|302644029|gb|EFL74288.1| GTPase EngB [Streptococcus pneumoniae BS457]
gi|302645507|gb|EFL75739.1| GTPase EngB [Streptococcus pneumoniae BS397]
gi|306409748|gb|ADM85175.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|306484840|gb|ADM91709.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|327389756|gb|EGE88101.1| hypothetical protein SPAR5_1446 [Streptococcus pneumoniae GA04375]
gi|332072415|gb|EGI82898.1| hypothetical protein SPAR50_1585 [Streptococcus pneumoniae GA17570]
gi|332072738|gb|EGI83219.1| hypothetical protein SPAR148_1498 [Streptococcus pneumoniae
GA17545]
gi|332073905|gb|EGI84383.1| hypothetical protein SPAR68_1577 [Streptococcus pneumoniae GA41301]
gi|332199612|gb|EGJ13687.1| hypothetical protein SPAR69_1522 [Streptococcus pneumoniae GA41317]
gi|332200132|gb|EGJ14205.1| hypothetical protein SPAR93_1607 [Streptococcus pneumoniae GA47368]
gi|332201009|gb|EGJ15080.1| hypothetical protein SPAR120_1514 [Streptococcus pneumoniae
GA47901]
gi|353746536|gb|EHD27196.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
4027-06]
gi|353746939|gb|EHD27597.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47502]
gi|353748472|gb|EHD29124.1| hypothetical protein SPAR19_1546 [Streptococcus pneumoniae GA11184]
gi|353751941|gb|EHD32572.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6735-05]
gi|353754592|gb|EHD35204.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44288]
gi|353756272|gb|EHD36873.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47281]
gi|353758274|gb|EHD38866.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47033]
gi|353761124|gb|EHD41696.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA43265]
gi|353763530|gb|EHD44084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44452]
gi|353764854|gb|EHD45402.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49138]
gi|353768389|gb|EHD48913.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA16531]
gi|353768884|gb|EHD49406.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6901-05]
gi|353771489|gb|EHD51998.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
7286-06]
gi|353774571|gb|EHD55058.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP070]
gi|353775857|gb|EHD56336.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44500]
gi|353778276|gb|EHD58744.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41410]
gi|353781920|gb|EHD62360.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49447]
gi|353783275|gb|EHD63704.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41538]
gi|353785182|gb|EHD65601.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5787-06]
gi|353787936|gb|EHD68334.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6963-05]
gi|353790965|gb|EHD71346.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA18523]
gi|353792476|gb|EHD72848.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44194]
gi|353796174|gb|EHD76519.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44511]
gi|353802051|gb|EHD82351.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07643]
gi|353804901|gb|EHD85179.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11304]
gi|353806332|gb|EHD86606.1| hypothetical protein SPAR30_1467 [Streptococcus pneumoniae GA13455]
gi|353806997|gb|EHD87269.1| hypothetical protein SPAR31_1728 [Streptococcus pneumoniae GA13494]
gi|353811283|gb|EHD91525.1| hypothetical protein SPAR34_1438 [Streptococcus pneumoniae GA13856]
gi|353812402|gb|EHD92637.1| hypothetical protein SPAR32_1600 [Streptococcus pneumoniae GA13637]
gi|353814286|gb|EHD94512.1| hypothetical protein SPAR37_1488 [Streptococcus pneumoniae GA14798]
gi|353816854|gb|EHD97062.1| hypothetical protein SPAR38_1546 [Streptococcus pneumoniae GA16121]
gi|353820410|gb|EHE00596.1| hypothetical protein SPAR39_1513 [Streptococcus pneumoniae GA16242]
gi|353822005|gb|EHE02181.1| hypothetical protein SPAR43_1612 [Streptococcus pneumoniae GA17227]
gi|353824305|gb|EHE04479.1| hypothetical protein SPAR41_1639 [Streptococcus pneumoniae GA16833]
gi|353827112|gb|EHE07266.1| hypothetical protein SPAR49_1590 [Streptococcus pneumoniae GA17328]
gi|353829166|gb|EHE09300.1| hypothetical protein SPAR52_1598 [Streptococcus pneumoniae GA17971]
gi|353829328|gb|EHE09461.1| hypothetical protein SPAR45_1500 [Streptococcus pneumoniae GA17371]
gi|353834162|gb|EHE14267.1| hypothetical protein SPAR56_1665 [Streptococcus pneumoniae GA19077]
gi|353835442|gb|EHE15536.1| hypothetical protein SPAR58_1489 [Streptococcus pneumoniae GA19451]
gi|353837924|gb|EHE18005.1| hypothetical protein SPAR67_1573 [Streptococcus pneumoniae GA41277]
gi|353840437|gb|EHE20501.1| hypothetical protein SPAR71_1600 [Streptococcus pneumoniae GA41437]
gi|353843003|gb|EHE23048.1| hypothetical protein SPAR74_1541 [Streptococcus pneumoniae GA41688]
gi|353848591|gb|EHE28603.1| hypothetical protein SPAR91_1495 [Streptococcus pneumoniae GA47283]
gi|353849546|gb|EHE29551.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47360]
gi|353850706|gb|EHE30710.1| hypothetical protein SPAR78_0872 [Streptococcus pneumoniae GA43380]
gi|353853537|gb|EHE33518.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47373]
gi|353855109|gb|EHE35079.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47388]
gi|353857731|gb|EHE37693.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47439]
gi|353860816|gb|EHE40756.1| hypothetical protein SPAR103_1395 [Streptococcus pneumoniae
GA47688]
gi|353862496|gb|EHE42428.1| hypothetical protein SPAR106_1485 [Streptococcus pneumoniae
GA47778]
gi|353864182|gb|EHE44100.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47976]
gi|353867350|gb|EHE47245.1| hypothetical protein SPAR115_1513 [Streptococcus pneumoniae
GA52306]
gi|353869508|gb|EHE49389.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA54644]
gi|353870294|gb|EHE50167.1| hypothetical protein SPAR147_1492 [Streptococcus pneumoniae
Netherlands15B-37]
gi|353873650|gb|EHE53509.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP127]
gi|353878568|gb|EHE58398.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5185-06]
gi|353880471|gb|EHE60286.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
3063-00]
gi|353881146|gb|EHE60960.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP112]
gi|353885235|gb|EHE65024.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
EU-NP01]
gi|353886407|gb|EHE66189.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA08780]
gi|353887297|gb|EHE67077.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07228]
gi|353891989|gb|EHE71739.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA19690]
gi|353892098|gb|EHE71847.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353902013|gb|EHE77543.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11426]
gi|353904681|gb|EHE80131.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA13338]
gi|379529835|gb|EHY95076.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02254]
gi|379530160|gb|EHY95400.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02714]
gi|379530514|gb|EHY95753.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02270]
gi|379536817|gb|EHZ02003.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04175]
gi|379537014|gb|EHZ02199.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13499]
gi|379538799|gb|EHZ03979.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05245]
gi|379542927|gb|EHZ08079.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05248]
gi|379544188|gb|EHZ09333.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA06083]
gi|379546186|gb|EHZ11325.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA07914]
gi|379549948|gb|EHZ15050.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA11856]
gi|379551628|gb|EHZ16722.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13224]
gi|379556561|gb|EHZ21616.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13723]
gi|379557525|gb|EHZ22569.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14373]
gi|379559007|gb|EHZ24038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14688]
gi|379563196|gb|EHZ28200.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17457]
gi|379565656|gb|EHZ30648.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA18068]
gi|379566060|gb|EHZ31051.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17719]
gi|379570372|gb|EHZ35336.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19101]
gi|379572775|gb|EHZ37732.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19923]
gi|379573400|gb|EHZ38355.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40028]
gi|379576858|gb|EHZ41782.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40183]
gi|379579216|gb|EHZ44123.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40563]
gi|379581568|gb|EHZ46452.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43257]
gi|379585424|gb|EHZ50280.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44128]
gi|379585915|gb|EHZ50769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43264]
gi|379587009|gb|EHZ51859.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44386]
gi|379592271|gb|EHZ57087.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47210]
gi|379592847|gb|EHZ57662.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47179]
gi|379593842|gb|EHZ58653.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47461]
gi|379598779|gb|EHZ63564.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47522]
gi|379599426|gb|EHZ64209.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47597]
gi|379600435|gb|EHZ65216.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47628]
gi|379605305|gb|EHZ70056.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47794]
gi|379605711|gb|EHZ70461.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47760]
gi|379608381|gb|EHZ73127.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49194]
gi|379611102|gb|EHZ75830.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49542]
gi|379613183|gb|EHZ77896.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 8190-05]
gi|379614767|gb|EHZ79477.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7879-04]
gi|379617823|gb|EHZ82503.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 5652-06]
gi|379618978|gb|EHZ83652.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7533-05]
gi|379621978|gb|EHZ86614.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 4075-00]
gi|379622747|gb|EHZ87381.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP02]
gi|379625825|gb|EHZ90451.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP03]
gi|379627910|gb|EHZ92516.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP04]
gi|379629041|gb|EHZ93642.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP05]
gi|379631434|gb|EHZ96011.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae NP141]
gi|379634129|gb|EHZ98694.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05578]
gi|379635638|gb|EIA00197.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae England14-9]
gi|379639241|gb|EIA03785.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02506]
gi|379641120|gb|EIA05658.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA08825]
gi|395572565|gb|EJG33160.1| hypothetical protein AMCSP03_001477 [Streptococcus pneumoniae
2070035]
gi|395573446|gb|EJG34036.1| hypothetical protein AMCSP11_001537 [Streptococcus pneumoniae
2070005]
gi|395574354|gb|EJG34932.1| hypothetical protein AMCSP20_001585 [Streptococcus pneumoniae
2090008]
gi|395579887|gb|EJG40382.1| hypothetical protein AMCSP04_001398 [Streptococcus pneumoniae
2070109]
gi|395585381|gb|EJG45765.1| hypothetical protein AMCSP05_001865 [Streptococcus pneumoniae
2070425]
gi|395588691|gb|EJG49019.1| hypothetical protein AMCSP14_000949 [Streptococcus pneumoniae
2070531]
gi|395588897|gb|EJG49219.1| hypothetical protein AMCSP06_001547 [Streptococcus pneumoniae
2070768]
gi|395593718|gb|EJG53960.1| hypothetical protein AMCSP01_001562 [Streptococcus pneumoniae
2061376]
gi|395594037|gb|EJG54277.1| hypothetical protein AMCSP08_001571 [Streptococcus pneumoniae
2072047]
gi|395594790|gb|EJG55025.1| hypothetical protein AMCSP16_001445 [Streptococcus pneumoniae
2080076]
gi|395600328|gb|EJG60485.1| hypothetical protein AMCSP02_001475 [Streptococcus pneumoniae
2061617]
gi|395603555|gb|EJG63691.1| hypothetical protein AMCSP15_000767 [Streptococcus pneumoniae
2071247]
gi|395606989|gb|EJG67089.1| hypothetical protein AMCSP09_001719 [Streptococcus pneumoniae
2081074]
gi|395607424|gb|EJG67521.1| hypothetical protein AMCSP17_001449 [Streptococcus pneumoniae
2080913]
gi|395607951|gb|EJG68047.1| hypothetical protein AMCSP10_001398 [Streptococcus pneumoniae
2081685]
gi|395613266|gb|EJG73295.1| hypothetical protein AMCSP18_001761 [Streptococcus pneumoniae
2082170]
gi|395613493|gb|EJG73521.1| hypothetical protein AMCSP19_001424 [Streptococcus pneumoniae
2082239]
gi|395866641|gb|EJG77769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR27]
gi|395867205|gb|EJG78329.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR48]
gi|395868989|gb|EJG80105.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR95]
gi|395873261|gb|EJG84353.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA52612]
gi|395874328|gb|EJG85414.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR55]
gi|395878855|gb|EJG89917.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17301]
gi|395880394|gb|EJG91446.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04216]
gi|395880832|gb|EJG91883.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04672]
gi|395886015|gb|EJG97036.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60190]
gi|395886405|gb|EJG97421.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58771]
gi|395887822|gb|EJG98836.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA54354]
gi|395891768|gb|EJH02762.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56348]
gi|395893433|gb|EJH04420.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56113]
gi|395895285|gb|EJH06260.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58581]
gi|395899002|gb|EJH09946.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19998]
gi|395900505|gb|EJH11443.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60080]
gi|395901580|gb|EJH12516.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17484]
gi|395904485|gb|EJH15399.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62331]
gi|395907167|gb|EJH18061.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60132]
gi|395909594|gb|EJH20469.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62681]
gi|395913145|gb|EJH23998.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47562]
gi|406369890|gb|AFS43580.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae gamPNI0373]
gi|429316435|emb|CCP36134.1| putative GTP-binding protein [Streptococcus pneumoniae SPN034156]
gi|429319779|emb|CCP33086.1| putative GTP-binding protein [Streptococcus pneumoniae SPN034183]
gi|429321595|emb|CCP35060.1| putative GTP-binding protein [Streptococcus pneumoniae SPN994039]
gi|429323415|emb|CCP31101.1| putative GTP-binding protein [Streptococcus pneumoniae SPN994038]
gi|444248007|gb|ELU54528.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8203]
gi|444251749|gb|ELU58217.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS125219]
gi|444251843|gb|ELU58310.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8106]
gi|444257933|gb|ELU64266.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS70012]
gi|444259864|gb|ELU66173.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0002]
gi|444260669|gb|ELU66977.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0006]
gi|444264980|gb|ELU71016.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS81218]
gi|444268165|gb|ELU74039.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0008]
gi|444269655|gb|ELU75459.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0007]
gi|444271227|gb|ELU76978.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0010]
gi|444277375|gb|ELU82886.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0009]
gi|444282080|gb|ELU87364.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0360]
gi|444284239|gb|ELU89395.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0427]
Length = 195
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|421312395|ref|ZP_15762997.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58981]
gi|395909249|gb|EJH20125.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58981]
Length = 195
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|422884265|ref|ZP_16930714.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK49]
gi|332360698|gb|EGJ38507.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK49]
Length = 195
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+ +A S +P D+PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 DILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ ++ W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ +V TK D +
Sbjct: 129 YEFLKYYDIPVVLVATKADKI 149
>gi|269964580|ref|ZP_06178819.1| GTP-binding protein [Vibrio alginolyticus 40B]
gi|269830707|gb|EEZ84927.1| GTP-binding protein [Vibrio alginolyticus 40B]
Length = 223
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 75 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + +++ + ++ V V + SS G G+
Sbjct: 135 IFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETFGGDVS-VDVFSSLKGLGVDQ 193
Query: 185 LRTVLS 190
LR L
Sbjct: 194 LRAKLD 199
>gi|91224945|ref|ZP_01260204.1| GTP-binding protein [Vibrio alginolyticus 12G01]
gi|91190191|gb|EAS76461.1| GTP-binding protein [Vibrio alginolyticus 12G01]
Length = 223
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 15 HFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFK 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K+ W++ + EY+ R LK + +L+D + +K D ++
Sbjct: 75 VEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + +++ + ++ V V + SS G G+
Sbjct: 135 IFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETFGGDVS-VDVFSSLKGLGVDQ 193
Query: 185 LRTVLS 190
LR L
Sbjct: 194 LRAKLD 199
>gi|15903469|ref|NP_359019.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae R6]
gi|15459080|gb|AAL00230.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 197
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 11 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 71 IDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 130
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 131 YEFLKYYEIPVIIVATKADKI 151
>gi|16762431|ref|NP_458048.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16767266|ref|NP_462881.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29143919|ref|NP_807261.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56415847|ref|YP_152922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62182463|ref|YP_218880.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|167551521|ref|ZP_02345276.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|167995106|ref|ZP_02576196.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168232924|ref|ZP_02657982.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168237615|ref|ZP_02662673.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168244253|ref|ZP_02669185.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168263108|ref|ZP_02685081.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168467330|ref|ZP_02701167.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194447921|ref|YP_002048005.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194468507|ref|ZP_03074491.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736984|ref|YP_002116922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197251708|ref|YP_002148921.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264265|ref|ZP_03164339.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|200387738|ref|ZP_03214350.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204930344|ref|ZP_03221321.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|213162853|ref|ZP_03348563.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213425461|ref|ZP_03358211.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213581475|ref|ZP_03363301.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213609177|ref|ZP_03369003.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213650654|ref|ZP_03380707.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213852344|ref|ZP_03381876.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|238913941|ref|ZP_04657778.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
gi|289829362|ref|ZP_06546974.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|374979493|ref|ZP_09720828.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375116811|ref|ZP_09761981.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|378452905|ref|YP_005240265.1| GTPase EngB [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378961777|ref|YP_005219263.1| GTP-binding protein engB [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|378986685|ref|YP_005249841.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378991282|ref|YP_005254446.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|379703243|ref|YP_005244971.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|383498602|ref|YP_005399291.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386589359|ref|YP_006085759.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|416427171|ref|ZP_11693394.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|416432229|ref|ZP_11696063.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|416435817|ref|ZP_11698030.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|416448651|ref|ZP_11706478.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|416452811|ref|ZP_11709242.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|416461628|ref|ZP_11715417.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|416464265|ref|ZP_11716285.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|416473015|ref|ZP_11719632.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416488267|ref|ZP_11725734.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|416502051|ref|ZP_11732538.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416505716|ref|ZP_11734091.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|416517833|ref|ZP_11739631.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|416529101|ref|ZP_11744128.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|416537559|ref|ZP_11748999.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|416547644|ref|ZP_11754666.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|416548396|ref|ZP_11754790.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|416560545|ref|ZP_11761264.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|416573299|ref|ZP_11767786.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|416580265|ref|ZP_11771748.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|416587352|ref|ZP_11776006.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|416592845|ref|ZP_11779562.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|416600754|ref|ZP_11784645.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|416605989|ref|ZP_11787391.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|416616321|ref|ZP_11794002.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|416622869|ref|ZP_11797170.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|416633001|ref|ZP_11801697.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|416645243|ref|ZP_11807354.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|416649420|ref|ZP_11809837.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416659026|ref|ZP_11814621.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|416664926|ref|ZP_11816378.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|416679426|ref|ZP_11823089.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|416694485|ref|ZP_11827196.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|416704798|ref|ZP_11830489.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|416710763|ref|ZP_11834740.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|416718011|ref|ZP_11840200.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|416723814|ref|ZP_11844439.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|416729370|ref|ZP_11847952.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416742239|ref|ZP_11855708.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416743751|ref|ZP_11856325.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416758989|ref|ZP_11863957.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|416764150|ref|ZP_11867807.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416770009|ref|ZP_11871412.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417324851|ref|ZP_12110995.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417345053|ref|ZP_12125267.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417353884|ref|ZP_12130467.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417361824|ref|ZP_12135626.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417387064|ref|ZP_12151597.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417394578|ref|ZP_12156715.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417415031|ref|ZP_12158797.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417471100|ref|ZP_12167147.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417490178|ref|ZP_12172926.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417521737|ref|ZP_12183372.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417535198|ref|ZP_12188756.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|418484596|ref|ZP_13053592.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|418491979|ref|ZP_13058481.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418494955|ref|ZP_13061401.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418499560|ref|ZP_13065965.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418505903|ref|ZP_13072245.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418506970|ref|ZP_13073297.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418526420|ref|ZP_13092397.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418764085|ref|ZP_13320189.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|418764409|ref|ZP_13320507.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|418768918|ref|ZP_13324956.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|418774546|ref|ZP_13330513.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|418779831|ref|ZP_13335728.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|418782627|ref|ZP_13338489.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|418800410|ref|ZP_13356063.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|419728714|ref|ZP_14255678.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419733491|ref|ZP_14260388.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419738541|ref|ZP_14265302.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419743170|ref|ZP_14269836.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419749260|ref|ZP_14275744.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419786615|ref|ZP_14312339.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419792982|ref|ZP_14318611.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421569880|ref|ZP_16015578.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421575613|ref|ZP_16021225.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421578859|ref|ZP_16024431.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421583566|ref|ZP_16029087.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421885453|ref|ZP_16316649.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422028237|ref|ZP_16374549.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422033288|ref|ZP_16379366.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427556589|ref|ZP_18929872.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427574510|ref|ZP_18934463.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427595814|ref|ZP_18939378.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427620389|ref|ZP_18944259.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427644111|ref|ZP_18949147.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427658257|ref|ZP_18953871.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427663514|ref|ZP_18958773.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427680611|ref|ZP_18963664.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427801577|ref|ZP_18969122.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|440763595|ref|ZP_20942633.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440766213|ref|ZP_20945210.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440771511|ref|ZP_20950426.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|452122226|ref|YP_007472474.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|54037056|sp|P64069.1|ENGB_SALTI RecName: Full=Probable GTP-binding protein EngB
gi|54040979|sp|P64068.1|ENGB_SALTY RecName: Full=Probable GTP-binding protein EngB
gi|75479463|sp|Q57HL3.1|ENGB_SALCH RecName: Full=Probable GTP-binding protein EngB
gi|81599694|sp|Q5PKC6.1|ENGB_SALPA RecName: Full=Probable GTP-binding protein EngB
gi|238690012|sp|B5EZX3.1|ENGB_SALA4 RecName: Full=Probable GTP-binding protein EngB
gi|238690599|sp|B4TBT8.1|ENGB_SALHS RecName: Full=Probable GTP-binding protein EngB
gi|238690710|sp|B4TPL2.1|ENGB_SALSV RecName: Full=Probable GTP-binding protein EngB
gi|25306632|pir||AG0950 ATP/GTP-binding protein [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16422563|gb|AAL22840.1| putative GTPase involved in coordination of cell cycle [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16504736|emb|CAD03099.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139555|gb|AAO71121.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130104|gb|AAV79610.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62130096|gb|AAX67799.1| putative GTPase, involved in coordination of cell cycle [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|194406225|gb|ACF66444.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194454871|gb|EDX43710.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712486|gb|ACF91707.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630199|gb|EDX48839.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197215411|gb|ACH52808.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197242520|gb|EDY25140.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289331|gb|EDY28696.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|199604836|gb|EDZ03381.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204320748|gb|EDZ05950.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205323760|gb|EDZ11599.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205327140|gb|EDZ13904.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205332795|gb|EDZ19559.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205336858|gb|EDZ23622.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205348121|gb|EDZ34752.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|267996284|gb|ACY91169.1| GTPase EngB [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|312915114|dbj|BAJ39088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321225285|gb|EFX50343.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613071|gb|EFY10021.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619142|gb|EFY16025.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322626008|gb|EFY22820.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322626534|gb|EFY23340.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322632355|gb|EFY29103.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322635165|gb|EFY31886.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642758|gb|EFY39347.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322647923|gb|EFY44395.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650673|gb|EFY47074.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322652856|gb|EFY49193.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657171|gb|EFY53451.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322662343|gb|EFY58558.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666878|gb|EFY63054.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672148|gb|EFY68263.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322675870|gb|EFY71942.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322681716|gb|EFY77742.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322684091|gb|EFY80100.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|322716957|gb|EFZ08528.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|323132342|gb|ADX19772.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323193363|gb|EFZ78578.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323197720|gb|EFZ82853.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323200708|gb|EFZ85779.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323211490|gb|EFZ96331.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323218465|gb|EGA03173.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323221055|gb|EGA05487.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323226030|gb|EGA10249.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323231710|gb|EGA15822.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236043|gb|EGA20121.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239537|gb|EGA23586.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243871|gb|EGA27882.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249233|gb|EGA33150.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250525|gb|EGA34408.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258979|gb|EGA42631.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323260224|gb|EGA43847.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265343|gb|EGA48840.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270565|gb|EGA54011.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|332990829|gb|AEF09812.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|353563296|gb|EHC29688.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353577844|gb|EHC39884.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353582998|gb|EHC43488.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353601496|gb|EHC57116.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353605081|gb|EHC59689.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353623632|gb|EHC72865.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353623868|gb|EHC73047.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353631133|gb|EHC78507.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353640706|gb|EHC85624.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353657242|gb|EHC97747.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357953421|gb|EHJ79967.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363552796|gb|EHL37075.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|363555981|gb|EHL40201.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|363559636|gb|EHL43793.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|363563258|gb|EHL47337.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|363570983|gb|EHL54901.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|363571999|gb|EHL55895.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|363574650|gb|EHL58513.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|366058623|gb|EHN22910.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|366058753|gb|EHN23033.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366060617|gb|EHN24879.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366066590|gb|EHN30750.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366070675|gb|EHN34781.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366081931|gb|EHN45869.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828758|gb|EHN55638.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205752|gb|EHP19259.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374355649|gb|AEZ47410.1| GTP-binding protein engB [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|379985060|emb|CCF88922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|380465423|gb|AFD60826.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381298835|gb|EIC39910.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381299932|gb|EIC40999.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381302074|gb|EIC43121.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381311662|gb|EIC52474.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381312257|gb|EIC53061.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|383796403|gb|AFH43485.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392618006|gb|EIX00420.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392621598|gb|EIX03952.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392730994|gb|EIZ88229.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|392741084|gb|EIZ98194.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|392743046|gb|EJA00123.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|392750571|gb|EJA07532.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|392751475|gb|EJA08425.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|392759819|gb|EJA16662.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|392783784|gb|EJA40394.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|402522063|gb|EJW29394.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402523801|gb|EJW31112.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402526160|gb|EJW33438.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402532056|gb|EJW39256.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414011986|gb|EKS95919.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414013210|gb|EKS97097.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414013457|gb|EKS97342.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414027140|gb|EKT10384.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414028033|gb|EKT11234.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414030486|gb|EKT13584.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414041507|gb|EKT24077.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414041874|gb|EKT24426.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414046654|gb|EKT28971.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414055424|gb|EKT37317.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414061620|gb|EKT43008.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436419381|gb|ELP17258.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436421086|gb|ELP18936.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436423292|gb|ELP21106.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|451911230|gb|AGF83036.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 210
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 15 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVDGK 74
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 75 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 134
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 135 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 191
Query: 188 VLS 190
L
Sbjct: 192 KLD 194
>gi|378765068|ref|YP_005193527.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea ananatis LMG
5342]
gi|386077331|ref|YP_005990856.1| GTP-binding protein EngB [Pantoea ananatis PA13]
gi|354986512|gb|AER30636.1| GTP-binding protein EngB [Pantoea ananatis PA13]
gi|365184540|emb|CCF07490.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea ananatis LMG
5342]
Length = 246
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 82/140 (58%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F++
Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
LVDLPGYG+A EE+K W+ + EY+ R +LK + +L+D + +K D ++I
Sbjct: 106 AEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVILMDIRHPLKDLDQQMI 165
Query: 126 SLMERSQTKYQVVLTKTDTV 145
S+ ++LTK D +
Sbjct: 166 QWAVESEIPVLLLLTKADKL 185
>gi|317497643|ref|ZP_07955959.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae
bacterium 5_1_63FAA]
gi|291559839|emb|CBL38639.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[butyrate-producing bacterium SSC/2]
gi|316895074|gb|EFV17240.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 200
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P LPE+AFAG+SNVGKSS++NAL + R S +PG TQTIN++ + +L
Sbjct: 14 ITSKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTINYYNINEELYY 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYGFA + VK+ W +++ Y+ T LK V LLID + D + + +
Sbjct: 74 VDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKNDVMMYDWILHN 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ ++ TK D + V + +I L+ + P+ S+ S G
Sbjct: 134 GYRPVIIATKLDKLKRSQVPKHLKEIRTELQMDKE--TPIFPFSALSKQG 181
>gi|449924720|ref|ZP_21799840.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
4SM1]
gi|450035198|ref|ZP_21834887.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
M21]
gi|450050890|ref|ZP_21840515.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NFSM1]
gi|449162355|gb|EMB65496.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
4SM1]
gi|449195837|gb|EMB97145.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
M21]
gi|449202307|gb|EMC03236.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NFSM1]
Length = 197
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 83/132 (62%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ++NF+ + KL VD
Sbjct: 20 SHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQSLNFYNIDDKLRFVD 79
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A ++ + W ++V+EY+++R +L+ V L+D + D ++ ++ +
Sbjct: 80 VPGYGYAKVSKKERAKWGKMVEEYLTSRENLRAVVSLVDFRHDPSSDDVQMYDFLKYYEI 139
Query: 134 KYQVVLTKTDTV 145
+V TK D V
Sbjct: 140 PVILVATKADKV 151
>gi|403387719|ref|ZP_10929776.1| GTP-binding protein YsxC [Clostridium sp. JC122]
Length = 196
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A +P + E AF GRSNVGKSS++N LT + +V+ S PG T+ INFF
Sbjct: 7 EFVISAVKPQQYPIDNRVEFAFVGRSNVGKSSLINTLTNRKKLVKVSGTPGKTRLINFFL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ + VDLPGYG+A ++ KD+W +++++Y+ R LK++ LL+D++ KP + ++
Sbjct: 67 INNEFYFVDLPGYGYAKVSKKEKDSWGKMMEKYLIDRPQLKKIVLLVDSRH--KPTNDDV 124
Query: 125 ISLMERSQTKYQVVL--TKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
I Y V++ TK D + + A+ I E+LK + + ++ SS G
Sbjct: 125 IMYNWVKHYGYNVIVVATKRDKLTNNEAAKSKKLIRETLKMDKE--ESIVFFSSLKKEGK 182
Query: 183 RSLRTVLSK 191
+L LSK
Sbjct: 183 ENLLEELSK 191
>gi|168821667|ref|ZP_02833667.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194443397|ref|YP_002043224.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|198244514|ref|YP_002217923.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|375121445|ref|ZP_09766612.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|375125295|ref|ZP_09770459.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|378957260|ref|YP_005214747.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|409247672|ref|YP_006888367.1| probable GTP-binding protein engB [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|417377068|ref|ZP_12146082.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|418787068|ref|ZP_13342873.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|418793576|ref|ZP_13349303.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|418800306|ref|ZP_13355968.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|418807168|ref|ZP_13362732.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|418811330|ref|ZP_13366861.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|418818565|ref|ZP_13374035.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821528|ref|ZP_13376952.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418827432|ref|ZP_13382580.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22462]
gi|418831378|ref|ZP_13386332.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|418838368|ref|ZP_13393216.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|418840884|ref|ZP_13395709.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|418845771|ref|ZP_13400551.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
gi|418849368|ref|ZP_13404100.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|418854755|ref|ZP_13409420.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
gi|418861286|ref|ZP_13415850.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|418865839|ref|ZP_13420309.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|418870448|ref|ZP_13424865.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
gi|421359813|ref|ZP_15810101.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421362903|ref|ZP_15813154.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421365967|ref|ZP_15816175.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421373796|ref|ZP_15823935.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421376353|ref|ZP_15826461.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421380924|ref|ZP_15830985.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421383953|ref|ZP_15833983.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421389797|ref|ZP_15839779.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421395823|ref|ZP_15845756.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421400269|ref|ZP_15850156.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421402172|ref|ZP_15852033.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421409347|ref|ZP_15859138.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421410901|ref|ZP_15860672.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421417013|ref|ZP_15866731.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421419948|ref|ZP_15869631.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421428223|ref|ZP_15877838.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421431899|ref|ZP_15881477.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421436457|ref|ZP_15885986.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421440965|ref|ZP_15890436.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421445547|ref|ZP_15894969.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|436618499|ref|ZP_20514449.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436689025|ref|ZP_20518009.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436796222|ref|ZP_20522784.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436806374|ref|ZP_20526619.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436814323|ref|ZP_20532265.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436830312|ref|ZP_20535210.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436848507|ref|ZP_20540098.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436855091|ref|ZP_20544456.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436862069|ref|ZP_20548922.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436872198|ref|ZP_20555262.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436881570|ref|ZP_20560965.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436885641|ref|ZP_20562589.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436892879|ref|ZP_20566976.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436900276|ref|ZP_20571330.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436910839|ref|ZP_20576929.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436920827|ref|ZP_20583314.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436923064|ref|ZP_20584965.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436937430|ref|ZP_20592604.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436939922|ref|ZP_20594082.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436950221|ref|ZP_20599751.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436957850|ref|ZP_20602993.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436973169|ref|ZP_20610546.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436980240|ref|ZP_20613332.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436990627|ref|ZP_20617030.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437011329|ref|ZP_20624505.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437023385|ref|ZP_20629062.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437031477|ref|ZP_20631461.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437046185|ref|ZP_20638137.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437047684|ref|ZP_20639047.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437055139|ref|ZP_20643373.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437063721|ref|ZP_20648086.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437074192|ref|ZP_20653603.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086339|ref|ZP_20660457.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437090479|ref|ZP_20662857.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437107155|ref|ZP_20667403.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437119612|ref|ZP_20670931.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437128212|ref|ZP_20675052.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437140219|ref|ZP_20682283.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437144997|ref|ZP_20685262.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437152356|ref|ZP_20690007.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437158718|ref|ZP_20693489.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437171865|ref|ZP_20700856.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437176221|ref|ZP_20703364.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437182395|ref|ZP_20707009.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437245578|ref|ZP_20714708.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437263997|ref|ZP_20719638.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437271830|ref|ZP_20724019.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437274918|ref|ZP_20725489.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437289589|ref|ZP_20731111.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437310645|ref|ZP_20735772.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437330240|ref|ZP_20741527.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437339757|ref|ZP_20744300.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437360266|ref|ZP_20748193.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437414848|ref|ZP_20753760.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437436193|ref|ZP_20756718.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437458748|ref|ZP_20760799.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437480481|ref|ZP_20768320.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437487833|ref|ZP_20770074.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437502623|ref|ZP_20774615.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437526664|ref|ZP_20779845.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437562330|ref|ZP_20786561.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437577524|ref|ZP_20790987.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437587070|ref|ZP_20793481.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437602785|ref|ZP_20798684.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437615030|ref|ZP_20802013.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437634775|ref|ZP_20807023.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437656447|ref|ZP_20810768.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437686338|ref|ZP_20819364.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437694030|ref|ZP_20821643.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437702962|ref|ZP_20824377.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437727465|ref|ZP_20830261.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437756170|ref|ZP_20834359.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437809820|ref|ZP_20840813.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437891916|ref|ZP_20849343.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438083027|ref|ZP_20858099.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438098740|ref|ZP_20862962.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438108934|ref|ZP_20867199.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438141514|ref|ZP_20875062.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|445137670|ref|ZP_21383602.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445140763|ref|ZP_21385072.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445156915|ref|ZP_21392871.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445169570|ref|ZP_21395296.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445186554|ref|ZP_21399287.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445229100|ref|ZP_21404908.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445244283|ref|ZP_21408044.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445331878|ref|ZP_21414315.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445343977|ref|ZP_21417348.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445366482|ref|ZP_21425326.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|238690342|sp|B5FNZ2.1|ENGB_SALDC RecName: Full=Probable GTP-binding protein EngB
gi|238693565|sp|B4SZ98.1|ENGB_SALNS RecName: Full=Probable GTP-binding protein EngB
gi|194402060|gb|ACF62282.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|197939030|gb|ACH76363.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|205341881|gb|EDZ28645.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|320088406|emb|CBY98165.1| probable GTP-binding protein engB [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326625712|gb|EGE32057.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326629545|gb|EGE35888.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|353591076|gb|EHC49437.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|357207871|gb|AET55917.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|392761646|gb|EJA18466.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|392764070|gb|EJA20874.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|392767240|gb|EJA24011.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|392779093|gb|EJA35763.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|392780156|gb|EJA36812.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|392784748|gb|EJA41330.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392790104|gb|EJA46605.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392796404|gb|EJA52741.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|392799477|gb|EJA55734.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|392799729|gb|EJA55982.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22462]
gi|392810024|gb|EJA66051.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|392812384|gb|EJA68374.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
gi|392821215|gb|EJA77042.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|392823292|gb|EJA79089.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
gi|392824929|gb|EJA80692.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|392826914|gb|EJA82633.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|392830536|gb|EJA86184.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
gi|395984317|gb|EJH93506.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395989028|gb|EJH98164.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395992500|gb|EJI01617.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395996122|gb|EJI05175.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396002568|gb|EJI11559.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396002712|gb|EJI11702.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396011746|gb|EJI20653.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396015727|gb|EJI24597.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396020940|gb|EJI29778.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396023877|gb|EJI32668.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396025137|gb|EJI33918.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396032840|gb|EJI41557.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396043649|gb|EJI52248.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396047188|gb|EJI55765.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396047310|gb|EJI55884.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396050050|gb|EJI58587.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396051722|gb|EJI60238.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396053047|gb|EJI61548.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396064567|gb|EJI72951.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396065130|gb|EJI73508.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|434939666|gb|ELL46445.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434961740|gb|ELL55006.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434965671|gb|ELL58594.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434969681|gb|ELL62372.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974476|gb|ELL66844.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434983902|gb|ELL75676.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434989341|gb|ELL80893.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434993411|gb|ELL84835.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434999497|gb|ELL90672.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435000621|gb|ELL91765.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435002980|gb|ELL94022.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|435004086|gb|ELL95083.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435012966|gb|ELM03640.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435020084|gb|ELM10504.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435022228|gb|ELM12560.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435027336|gb|ELM17459.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435027612|gb|ELM17733.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435036066|gb|ELM25904.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435042568|gb|ELM32287.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435047228|gb|ELM36823.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435052816|gb|ELM42302.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435054759|gb|ELM44187.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435056401|gb|ELM45791.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435065055|gb|ELM54162.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435067756|gb|ELM56795.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435070158|gb|ELM59155.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435075347|gb|ELM64168.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435078941|gb|ELM67660.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435080801|gb|ELM69468.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435099235|gb|ELM87452.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435100311|gb|ELM88494.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435101839|gb|ELM89971.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435103762|gb|ELM91838.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435107136|gb|ELM95132.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435114483|gb|ELN02288.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435120947|gb|ELN08510.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435128914|gb|ELN16239.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435129254|gb|ELN16560.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435130277|gb|ELN17533.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435137855|gb|ELN24889.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435142843|gb|ELN29723.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435145520|gb|ELN32331.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435151010|gb|ELN37672.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435155998|gb|ELN42501.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435160378|gb|ELN46657.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435164444|gb|ELN50526.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435169614|gb|ELN55385.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435174025|gb|ELN59484.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435175510|gb|ELN60927.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435182344|gb|ELN67365.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435184696|gb|ELN69619.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435189974|gb|ELN74587.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435195314|gb|ELN79717.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435202742|gb|ELN86567.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435210789|gb|ELN94024.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435213597|gb|ELN96481.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435218298|gb|ELO00700.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435222719|gb|ELO04811.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435232238|gb|ELO13345.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435237425|gb|ELO18116.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435237592|gb|ELO18259.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435243072|gb|ELO23371.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435247487|gb|ELO27419.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435259126|gb|ELO38358.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435259414|gb|ELO38638.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435263320|gb|ELO42386.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435266466|gb|ELO45223.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435271921|gb|ELO50357.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435278937|gb|ELO56761.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435281275|gb|ELO58951.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435291251|gb|ELO68115.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435294123|gb|ELO70772.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435299155|gb|ELO75326.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435310212|gb|ELO84743.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435320314|gb|ELO92974.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435326366|gb|ELO98194.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435326720|gb|ELO98506.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435333009|gb|ELP03896.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|444844172|gb|ELX69416.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444846975|gb|ELX72127.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444852042|gb|ELX77125.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444863187|gb|ELX88015.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444865765|gb|ELX90528.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444869431|gb|ELX94014.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444877337|gb|ELY01488.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444880622|gb|ELY04690.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444882604|gb|ELY06545.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444890582|gb|ELY13902.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
Length = 210
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 15 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVEGK 74
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 75 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 134
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 135 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 191
Query: 188 VLS 190
L
Sbjct: 192 KLD 194
>gi|418514099|ref|ZP_13080313.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366080172|gb|EHN44146.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 210
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IQWAVESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|365972781|ref|YP_004954342.1| GTP-binding protein engB [Enterobacter cloacae EcWSU1]
gi|365751694|gb|AEW75921.1| putative GTP-binding protein engB [Enterobacter cloacae EcWSU1]
Length = 209
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRQCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S+ V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IDWAVSSEIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|365847527|ref|ZP_09388014.1| ribosome biogenesis GTP-binding protein YsxC [Yokenella
regensburgei ATCC 43003]
gi|364572306|gb|EHM49861.1| ribosome biogenesis GTP-binding protein YsxC [Yokenella
regensburgei ATCC 43003]
Length = 209
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
LVDLPGYG+A EE+K W+ + EY+ R+ LK + +L+D + +K D ++
Sbjct: 70 TAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRICLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E+ A N VQ V SS G+
Sbjct: 130 IEWAVDSNIPVLVLLTKADKL--ASGARKAQLNMVREAALAFNGDVQ-VEAFSSLKKMGV 186
Query: 183 RSLRTVLS 190
L+ L
Sbjct: 187 DKLKQKLD 194
>gi|421236675|ref|ZP_15693272.1| hypothetical protein AMCSP07_001482 [Streptococcus pneumoniae
2071004]
gi|395601438|gb|EJG61585.1| hypothetical protein AMCSP07_001482 [Streptococcus pneumoniae
2071004]
Length = 195
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P +LPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ K+ VD+PGYG+A ++ ++ W +++EY++TR +L+ V L+D + D ++
Sbjct: 69 IDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVIIVATKADKI 149
>gi|197364777|ref|YP_002144414.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|378447338|ref|YP_005234970.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378701860|ref|YP_005183818.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|197096254|emb|CAR61852.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|261249117|emb|CBG26978.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|301160509|emb|CBW20039.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 4 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVDGK 63
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 64 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 123
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 124 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 180
Query: 188 VLS 190
L
Sbjct: 181 KLD 183
>gi|157147356|ref|YP_001454675.1| hypothetical protein CKO_03149 [Citrobacter koseri ATCC BAA-895]
gi|157084561|gb|ABV14239.1| hypothetical protein CKO_03149 [Citrobacter koseri ATCC BAA-895]
Length = 198
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVEGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 123 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|365540267|ref|ZP_09365442.1| GTP-binding protein YsxC [Vibrio ordalii ATCC 33509]
Length = 232
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + EIAFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPDDEGIEIAFAGRSNAGKSSSLNRLTNQKSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VTEGCHIVDLPGYGFAQVPLELKKKWQKSLGEYLQKRKSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
IS V+LTK D + + ++I E +A V V SS G G+
Sbjct: 131 ISWAVDCYIPVLVLLTKADKLKSGARKAQVLKIREEERAFGGDVT-VDAFSSLKGLGVDV 189
Query: 185 LRTVLS 190
LR L
Sbjct: 190 LRNKLD 195
>gi|416823302|ref|ZP_11895458.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. USDA 5905]
gi|420272456|ref|ZP_14774801.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA22]
gi|420289475|ref|ZP_14791654.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10246]
gi|424080195|ref|ZP_17817132.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA505]
gi|424099694|ref|ZP_17834929.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1985]
gi|424105888|ref|ZP_17840600.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1990]
gi|424118461|ref|ZP_17852278.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA3]
gi|424124660|ref|ZP_17857939.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA5]
gi|424130824|ref|ZP_17863709.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA9]
gi|424143693|ref|ZP_17875527.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA14]
gi|424458560|ref|ZP_17909639.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA33]
gi|424534931|ref|ZP_17978262.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4422]
gi|424541019|ref|ZP_17983946.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4013]
gi|424559565|ref|ZP_18000941.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4436]
gi|424572015|ref|ZP_18012531.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4448]
gi|424578173|ref|ZP_18018189.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1845]
gi|424583995|ref|ZP_18023624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1863]
gi|425100669|ref|ZP_18503388.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.4870]
gi|425112744|ref|ZP_18514648.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
6.0172]
gi|425158724|ref|ZP_18557970.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA34]
gi|425176835|ref|ZP_18574938.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA504]
gi|425189195|ref|ZP_18586449.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1997]
gi|425208778|ref|ZP_18604559.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK2001]
gi|425314034|ref|ZP_18703184.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1735]
gi|425320016|ref|ZP_18708776.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1736]
gi|425326156|ref|ZP_18714465.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1737]
gi|425344937|ref|ZP_18731809.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1848]
gi|425350775|ref|ZP_18737217.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1849]
gi|425375569|ref|ZP_18760191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1864]
gi|320660847|gb|EFX28293.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. USDA 5905]
gi|390637397|gb|EIN16946.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA505]
gi|390655638|gb|EIN33557.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1985]
gi|390659015|gb|EIN36784.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1990]
gi|390673841|gb|EIN50056.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA3]
gi|390677171|gb|EIN53234.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA5]
gi|390680554|gb|EIN56386.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA9]
gi|390696052|gb|EIN70550.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA14]
gi|390711109|gb|EIN84098.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA22]
gi|390741003|gb|EIO12102.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA33]
gi|390786749|gb|EIO54255.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10246]
gi|390858091|gb|EIP20504.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4422]
gi|390862375|gb|EIP24563.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4013]
gi|390880171|gb|EIP40878.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4436]
gi|390891317|gb|EIP50952.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4448]
gi|390915254|gb|EIP73770.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1845]
gi|390915698|gb|EIP74201.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1863]
gi|408064938|gb|EKG99418.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA34]
gi|408088239|gb|EKH21618.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA504]
gi|408100607|gb|EKH33096.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1997]
gi|408118641|gb|EKH49765.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK2001]
gi|408223429|gb|EKI47202.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1735]
gi|408234821|gb|EKI57819.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1736]
gi|408237406|gb|EKI60262.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1737]
gi|408255984|gb|EKI77392.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1848]
gi|408262677|gb|EKI83596.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1849]
gi|408288286|gb|EKJ07115.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1864]
gi|408545064|gb|EKK22504.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.4870]
gi|408545645|gb|EKK23071.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
6.0172]
Length = 198
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 123 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|331644593|ref|ZP_08345712.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H736]
gi|331655546|ref|ZP_08356538.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M718]
gi|331665512|ref|ZP_08366410.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA143]
gi|331670706|ref|ZP_08371542.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA271]
gi|331679971|ref|ZP_08380633.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H591]
gi|26111058|gb|AAN83241.1|AE016770_41 Probable GTP-binding protein engB [Escherichia coli CFT073]
gi|147313|gb|AAA24403.1| unidentified protein [Escherichia coli]
gi|304970|gb|AAB02999.1| matches PS00017: ATP_GTP_A [Escherichia coli str. K-12 substr.
MG1655]
gi|73857847|gb|AAZ90554.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81243109|gb|ABB63819.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|91074985|gb|ABE09866.1| probable GTP-binding cell division protein [Escherichia coli UTI89]
gi|331036055|gb|EGI08291.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H736]
gi|331046647|gb|EGI18732.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M718]
gi|331057197|gb|EGI29187.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA143]
gi|331061961|gb|EGI33884.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA271]
gi|331072297|gb|EGI43630.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H591]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 4 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 63
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 64 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 123
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 124 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 180
Query: 188 VLS 190
L
Sbjct: 181 KLD 183
>gi|407790687|ref|ZP_11137779.1| GTP-binding protein EngB [Gallaecimonas xiamenensis 3-C-1]
gi|407203024|gb|EKE73012.1| GTP-binding protein EngB [Gallaecimonas xiamenensis 3-C-1]
Length = 188
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT-KLCLVDLPGYGFAY 81
EIAFAGRSN GKSS LNA+T Q + RTS PG TQ IN F L + CLVDLPGYGFA
Sbjct: 2 EIAFAGRSNAGKSSALNAITGQKQLARTSKTPGRTQLINLFSLADPRHCLVDLPGYGFAK 61
Query: 82 AKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTK 141
E+K+ W+ + EY+ R SL+ V +L+D + K D +LI S +LTK
Sbjct: 62 VPLELKEKWQASLSEYLEKRESLRGVVVLMDIRHPFKEIDQDLIYWAVESGLPVLALLTK 121
Query: 142 TDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLS 190
D + +Q E+ A V VM +S+ G G+ +R L+
Sbjct: 122 ADKLKSGARKTTLLQCREAALAFGGDVT-VMAISALRGLGLDEVRRHLA 169
>gi|417983411|ref|ZP_12624049.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|417992852|ref|ZP_12633204.1| GTP-binding protein [Lactobacillus casei CRF28]
gi|417996200|ref|ZP_12636483.1| GTP-binding protein [Lactobacillus casei M36]
gi|418001970|ref|ZP_12642098.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|418014910|ref|ZP_12654498.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|410528357|gb|EKQ03210.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|410532643|gb|EKQ07345.1| GTP-binding protein [Lactobacillus casei CRF28]
gi|410535909|gb|EKQ10519.1| GTP-binding protein [Lactobacillus casei M36]
gi|410545415|gb|EKQ19715.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|410552610|gb|EKQ26627.1| GTP-binding protein [Lactobacillus casei Lpc-37]
Length = 198
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A ++ +P PEIAF GRSNVGKSS++N L ++ + RTS PG TQT+NF+ L ++
Sbjct: 11 SAVAAAQYPEDGHPEIAFLGRSNVGKSSLINKLIQRKAMARTSGVPGKTQTLNFYDLDSR 70
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + + +++ Y++TR L+ V LL+D++ D + +
Sbjct: 71 LFFVDVPGYGYAKVSKTARAKFAAMIETYLTTRQPLRGVVLLVDSRHEPTADDISMYQYL 130
Query: 129 ERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTV 188
+ Q + VV TK D + QI++ L N + V++ S+ +G G ++ +
Sbjct: 131 KYYQLRTLVVATKIDKTPKSKRLHVSKQIKQRLDLNQT--DDVILFSATTGEGYEAVWSW 188
Query: 189 LSKIA 193
L + A
Sbjct: 189 LEQTA 193
>gi|254490408|ref|ZP_05103595.1| putative GTPase [Methylophaga thiooxidans DMS010]
gi|224464374|gb|EEF80636.1| putative GTPase [Methylophaga thiooxydans DMS010]
Length = 219
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 3/179 (1%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
+ +A S P E+AFAGRSN GKSS +N +T + RTS PG TQ INFF
Sbjct: 24 YTGSATQLSQLPEDTGFEVAFAGRSNAGKSSAINTITGIRSLARTSKTPGRTQMINFFHF 83
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
+ LVDLPGYG+A E++K W++ + +Y+ TR SL+ + +++D + +K D +++
Sbjct: 84 DDQRALVDLPGYGYAKVPEKMKQKWQQTLAKYLETRQSLRGLMMMMDVRHPLKEFDLQML 143
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS--KSGAGI 182
S ++ ++LTK D + + +++ LK N+ L V + SS KSG I
Sbjct: 144 SWANQADLSVHILLTKADKLKNSAAKQSLLKVVAELK-NHDLKASVQLFSSLNKSGRDI 201
>gi|81247620|gb|ABB68328.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 4 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 63
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 64 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRHSLQGLVVLMDIRHPLKDLDQQMIEWAV 123
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 124 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 180
Query: 188 VLS 190
L
Sbjct: 181 KLD 183
>gi|33151575|ref|NP_872928.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus ducreyi
35000HP]
gi|71151867|sp|Q7VNY0.1|ENGB_HAEDU RecName: Full=Probable GTP-binding protein EngB
gi|33147795|gb|AAP95317.1| conserved possible cell division GTP-binding protein [Haemophilus
ducreyi 35000HP]
Length = 210
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 91/160 (56%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A P + EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 11 HKTRFLTSAPDIRHLPEDNGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLIN 70
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++ + EY+ R L + +L+D + +K D
Sbjct: 71 LFEVEPQCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRDCLAGIVILMDIRHPLKDLD 130
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++I +Q ++LTK D + + + A + E++
Sbjct: 131 QQMIEWAVSAQLPVLLLLTKADKLSQVARNKTAKMVNEAI 170
>gi|218550896|ref|YP_002384687.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii ATCC 35469]
gi|218358437|emb|CAQ91084.1| GTP-binding protein [Escherichia fergusonii ATCC 35469]
Length = 198
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 123 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|170083337|ref|YP_001732657.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
K-12 substr. DH10B]
gi|209921338|ref|YP_002295422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
SE11]
gi|218556424|ref|YP_002389338.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
IAI1]
gi|218560940|ref|YP_002393853.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli S88]
gi|218692151|ref|YP_002400363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
ED1a]
gi|218697578|ref|YP_002405245.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
55989]
gi|218701436|ref|YP_002409065.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
IAI39]
gi|218707490|ref|YP_002415009.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
UMN026]
gi|251787129|ref|YP_003001433.1| cell division protein; predicted checkpoint GTPase [Escherichia
coli BL21(DE3)]
gi|254163816|ref|YP_003046924.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B
str. REL606]
gi|254290566|ref|YP_003056314.1| GTP-binding protein [Escherichia coli BL21(DE3)]
gi|300819243|ref|ZP_07099443.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
107-1]
gi|300823684|ref|ZP_07103810.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
119-7]
gi|300896904|ref|ZP_07115391.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
198-1]
gi|300906179|ref|ZP_07123892.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
84-1]
gi|300919046|ref|ZP_07135591.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
115-1]
gi|300925949|ref|ZP_07141782.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
182-1]
gi|300931705|ref|ZP_07147011.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
187-1]
gi|300937087|ref|ZP_07151950.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
21-1]
gi|300948175|ref|ZP_07162303.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
116-1]
gi|300958280|ref|ZP_07170425.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
175-1]
gi|301023770|ref|ZP_07187506.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
69-1]
gi|301303330|ref|ZP_07209454.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
124-1]
gi|301328178|ref|ZP_07221308.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
78-1]
gi|301648437|ref|ZP_07248169.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
146-1]
gi|309797830|ref|ZP_07692213.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
145-7]
gi|312971850|ref|ZP_07786024.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|386699365|ref|YP_006163202.1| cell division protein [Escherichia coli KO11FL]
gi|386707121|ref|YP_006170968.1| Putative GTP-binding protein [Escherichia coli P12b]
gi|387614554|ref|YP_006117670.1| GTP-binding protein [Escherichia coli ETEC H10407]
gi|388479393|ref|YP_491585.1| GTP-binding protein [Escherichia coli str. K-12 substr. W3110]
gi|415773744|ref|ZP_11486328.1| conserved hypothetical protein [Escherichia coli 3431]
gi|415799663|ref|ZP_11498920.1| hypothetical protein ECE128010_2621 [Escherichia coli E128010]
gi|415810398|ref|ZP_11502805.1| hypothetical protein ECLT68_1102 [Escherichia coli LT-68]
gi|415821913|ref|ZP_11510694.1| hypothetical protein ECOK1180_3470 [Escherichia coli OK1180]
gi|415831580|ref|ZP_11517231.1| hypothetical protein ECOK1357_4237 [Escherichia coli OK1357]
gi|415846410|ref|ZP_11525479.1| hypothetical protein SS53G_2212 [Shigella sonnei 53G]
gi|415865199|ref|ZP_11538084.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
85-1]
gi|415876604|ref|ZP_11542986.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
79-10]
gi|417599299|ref|ZP_12249923.1| hypothetical protein EC30301_4471 [Escherichia coli 3030-1]
gi|417620532|ref|ZP_12270931.1| hypothetical protein ECG581_4375 [Escherichia coli G58-1]
gi|417626038|ref|ZP_12276325.1| hypothetical protein ECSTECH18_4841 [Escherichia coli STEC_H.1.8]
gi|417631344|ref|ZP_12281574.1| hypothetical protein ECSTECMHI813_4311 [Escherichia coli
STEC_MHI813]
gi|418960254|ref|ZP_13512147.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli J53]
gi|419352102|ref|ZP_13893427.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13B]
gi|419404503|ref|ZP_13945218.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15C]
gi|419931854|ref|ZP_14449227.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
576-1]
gi|420365908|ref|ZP_14866765.1| cell division protein putative checkpoint GTPase [Shigella sonnei
4822-66]
gi|420393997|ref|ZP_14893240.1| cell division protein putative checkpoint GTPase [Escherichia coli
EPEC C342-62]
gi|422352190|ref|ZP_16432984.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
117-3]
gi|425275153|ref|ZP_18666531.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW15901]
gi|425280315|ref|ZP_18671526.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
ARS4.2123]
gi|425291077|ref|ZP_18681883.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3006]
gi|425302765|ref|ZP_18692642.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
07798]
gi|425424886|ref|ZP_18806030.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
0.1288]
gi|85676194|dbj|BAE77444.1| GTP-binding protein [Escherichia coli str. K12 substr. W3110]
gi|169891172|gb|ACB04879.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B]
gi|209914597|dbj|BAG79671.1| GTP-binding protein [Escherichia coli SE11]
gi|218354310|emb|CAQ86984.2| GTP-binding protein [Escherichia coli 55989]
gi|218363193|emb|CAR00835.1| GTP-binding protein [Escherichia coli IAI1]
gi|218367709|emb|CAR05498.1| GTP-binding protein [Escherichia coli S88]
gi|218371422|emb|CAR19255.1| GTP-binding protein [Escherichia coli IAI39]
gi|218429715|emb|CAV18037.1| GTP-binding protein [Escherichia coli ED1a]
gi|218434587|emb|CAR15516.1| GTP-binding protein [Escherichia coli UMN026]
gi|242379402|emb|CAQ34216.1| cell division protein; predicted checkpoint GTPase [Escherichia
coli BL21(DE3)]
gi|253975717|gb|ACT41388.1| GTP-binding protein [Escherichia coli B str. REL606]
gi|253979873|gb|ACT45543.1| GTP-binding protein [Escherichia coli BL21(DE3)]
gi|300315049|gb|EFJ64833.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
175-1]
gi|300359270|gb|EFJ75140.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
198-1]
gi|300396884|gb|EFJ80422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
69-1]
gi|300402015|gb|EFJ85553.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
84-1]
gi|300413838|gb|EFJ97148.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
115-1]
gi|300417986|gb|EFK01297.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
182-1]
gi|300452285|gb|EFK15905.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
116-1]
gi|300457830|gb|EFK21323.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
21-1]
gi|300460511|gb|EFK24004.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
187-1]
gi|300523746|gb|EFK44815.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
119-7]
gi|300528129|gb|EFK49191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
107-1]
gi|300841284|gb|EFK69044.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
124-1]
gi|300845351|gb|EFK73111.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
78-1]
gi|301073492|gb|EFK88298.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
146-1]
gi|308118586|gb|EFO55848.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
145-7]
gi|309704290|emb|CBJ03639.1| probable GTP-binding protein [Escherichia coli ETEC H10407]
gi|310334227|gb|EFQ00432.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|315254226|gb|EFU34194.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
85-1]
gi|315618770|gb|EFU99354.1| conserved hypothetical protein [Escherichia coli 3431]
gi|323161075|gb|EFZ46993.1| hypothetical protein ECE128010_2621 [Escherichia coli E128010]
gi|323167490|gb|EFZ53197.1| hypothetical protein SS53G_2212 [Shigella sonnei 53G]
gi|323174271|gb|EFZ59898.1| hypothetical protein ECLT68_1102 [Escherichia coli LT-68]
gi|323177874|gb|EFZ63458.1| hypothetical protein ECOK1180_3470 [Escherichia coli OK1180]
gi|323182381|gb|EFZ67788.1| hypothetical protein ECOK1357_4237 [Escherichia coli OK1357]
gi|324019780|gb|EGB88999.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
117-3]
gi|342928543|gb|EGU97265.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
79-10]
gi|345348795|gb|EGW81088.1| hypothetical protein EC30301_4471 [Escherichia coli 3030-1]
gi|345368993|gb|EGX00982.1| hypothetical protein ECSTECMHI813_4311 [Escherichia coli
STEC_MHI813]
gi|345369285|gb|EGX01272.1| hypothetical protein ECG581_4375 [Escherichia coli G58-1]
gi|345371342|gb|EGX03312.1| hypothetical protein ECSTECH18_4841 [Escherichia coli STEC_H.1.8]
gi|359333989|dbj|BAL40436.1| GTP-binding protein [Escherichia coli str. K-12 substr. MDS42]
gi|378195440|gb|EHX55938.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13B]
gi|378242419|gb|EHY02372.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15C]
gi|383105289|gb|AFG42798.1| Putative GTP-binding protein [Escherichia coli P12b]
gi|383390892|gb|AFH15850.1| cell division protein, predicted checkpoint GTPase [Escherichia
coli KO11FL]
gi|384377069|gb|EIE34967.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli J53]
gi|388420339|gb|EIL80035.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
576-1]
gi|391291543|gb|EIQ49935.1| cell division protein putative checkpoint GTPase [Shigella sonnei
4822-66]
gi|391309400|gb|EIQ67070.1| cell division protein putative checkpoint GTPase [Escherichia coli
EPEC C342-62]
gi|408189503|gb|EKI15220.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW15901]
gi|408197309|gb|EKI22573.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
ARS4.2123]
gi|408208647|gb|EKI33279.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3006]
gi|408210264|gb|EKI34832.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
07798]
gi|408340361|gb|EKJ54858.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
0.1288]
Length = 198
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 62
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 63 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV 122
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 123 DSNIAVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLRQ 179
Query: 188 VLS 190
L
Sbjct: 180 KLD 182
>gi|365966651|ref|YP_004948213.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365745564|gb|AEW76469.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 240
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F ++ S P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 45 HKTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 104
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++ + EY+ R L + +L+D + +K D
Sbjct: 105 LFEVEPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLD 164
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++I SQ ++LTK D + + +++ + E++
Sbjct: 165 QQMIEWAVASQLPVLLLLTKADKLSQSERSKQMKMVREAI 204
>gi|449931110|ref|ZP_21802179.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
3SN1]
gi|449941187|ref|ZP_21805417.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
11A1]
gi|449152231|gb|EMB55942.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
11A1]
gi|449163163|gb|EMB66276.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
3SN1]
Length = 197
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 84/132 (63%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ++NF+ + KL VD
Sbjct: 20 SHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQSLNFYNIDDKLRFVD 79
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A ++ + W ++++EY+++R +L+ V L+D + D ++ + ++ +
Sbjct: 80 VPGYGYAKVSKKERAKWGKMIEEYLTSRENLRAVVSLVDFRHDPSSDDVQMYNFLKYYEI 139
Query: 134 KYQVVLTKTDTV 145
+V TK D V
Sbjct: 140 PVILVATKADKV 151
>gi|420368051|ref|ZP_14868825.1| putative GTP-binding protein EngB [Shigella flexneri 1235-66]
gi|391322732|gb|EIQ79406.1| putative GTP-binding protein EngB [Shigella flexneri 1235-66]
Length = 210
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 70 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 ILWAVESNVQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKLGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|19745954|ref|NP_607090.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS8232]
gi|24418369|sp|Q8P1C8.1|ENGB_STRP8 RecName: Full=Probable GTP-binding protein EngB
gi|19748113|gb|AAL97589.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes
MGAS8232]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAEWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 137 KYYDIPVIVVATKADKI 153
>gi|452995866|emb|CCQ92254.1| GTPase involved in ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 215
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF +A S +P LPEIA AGRSNVGKSS +N++ + + R S KPG TQT+NF++
Sbjct: 7 EFIGSAVHPSQYPQDGLPEIALAGRSNVGKSSFINSMLNRKNLARISSKPGKTQTLNFYR 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+G + VDLPGYG+A ++ ++AW +++ Y+ R +L + L+D + +D ++
Sbjct: 67 VGGRFYFVDLPGYGYAEVSKKEREAWGAMIERYIKGRKTLLFLIQLVDIRHPPSGQDRQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
+ S VV TK D +
Sbjct: 127 REWIVHSGIPSLVVATKADKI 147
>gi|392553089|ref|ZP_10300226.1| GTP-binding protein YsxC [Pseudoalteromonas spongiae UST010723-006]
Length = 215
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A + PA E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN
Sbjct: 9 SKASFITSAPDITKLPADSGVEVAFAGRSNAGKSSALNTLTDQ-KLARTSKTPGRTQLIN 67
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F LG + ++DLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D
Sbjct: 68 TFSLGEDMRIIDLPGYGFAKVPLEMKKKWQKSLGEYLQKRESLKGIVVLMDIRHPLKELD 127
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+LI+ S + +LTK D + +++ LK + + V SS G G
Sbjct: 128 MDLINWAVESDLEILALLTKADKLKQGKRKSEVLKVRRELKELSDKIT-VHAFSSLKGIG 186
Query: 182 IRSLRTVL 189
+ L L
Sbjct: 187 LPELAKTL 194
>gi|357639562|ref|ZP_09137435.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis 2285-97]
gi|418416327|ref|ZP_12989526.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis FB127-CNA-2]
gi|357588016|gb|EHJ57424.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis 2285-97]
gi|410874145|gb|EKS22076.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis FB127-CNA-2]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P D+PEIA AGRSNVGKSS +N+L + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDIPEIALAGRSNVGKSSFINSLLGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A ++ ++ W ++++EY+ TR +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKKERERWGKMIEEYLVTRDNLRAVVSLVDLRHEPSKDDVQMYEFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ +V TK D +
Sbjct: 137 KYYDIPVIIVATKADKI 153
>gi|325662425|ref|ZP_08151031.1| GTP-binding protein engB [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471259|gb|EGC74483.1| GTP-binding protein engB [Lachnospiraceae bacterium 4_1_37FAA]
Length = 205
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P D PEIAFAG+SNVGKSS++NAL + R S PG TQTINF+ + ++ L
Sbjct: 14 ITSKLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINEEMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A E+ K W +L+++Y+ T L+ V LLID + D + +
Sbjct: 74 VDLPGYGYAKVSEKEKIQWGKLIEKYLHTSKQLRAVFLLIDIRHEPSANDKMMYQWIVDQ 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++ TK D + V + I+E L+
Sbjct: 134 GYNPIIIATKLDKIKRSQVQKHVKMIKEGLQ 164
>gi|291085891|ref|ZP_06354360.2| hypothetical protein CIT292_08820 [Citrobacter youngae ATCC 29220]
gi|291069529|gb|EFE07638.1| ribosome biogenesis GTP-binding protein YsxC [Citrobacter youngae
ATCC 29220]
Length = 215
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 101/187 (54%), Gaps = 5/187 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 15 HFVMSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 74
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++
Sbjct: 75 VVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQQM 134
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S + V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 135 ILWAVESNVQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKLGV 191
Query: 183 RSLRTVL 189
LR L
Sbjct: 192 DKLRQKL 198
>gi|429750902|ref|ZP_19283901.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 332 str. F0381]
gi|429163663|gb|EKY05866.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 332 str. F0381]
Length = 200
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K EF + + P LPE AF GRSNVGKSS++N LT Q + +TS +PG TQ I
Sbjct: 2 IKKAEFVMSNSQVAKCPKEPLPEYAFIGRSNVGKSSLINMLTNQKNLAKTSARPGKTQLI 61
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ + LVDLPGYG+A + K +++ + Y R L +L+D + +
Sbjct: 62 NHFKINDQWFLVDLPGYGYARVSKTTKKTFQKFITNYFEQRKQLVCAFVLVDIRHEPQKI 121
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D E + + + + +V TK D + P+ + R +E L + + P + S+++
Sbjct: 122 DLEFMQWLGENAVPFAIVFTKADKLKPLAIERNIATYQEILLKSWEAMPPYFVTSAENYI 181
Query: 181 GIRSLRTVLSKIAR 194
G L + I +
Sbjct: 182 GKEELVGYIEDINK 195
>gi|406983139|gb|EKE04386.1| ribosome biogenesis GTP-binding protein YsxC [uncultured bacterium]
Length = 192
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 99/177 (55%), Gaps = 6/177 (3%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF ++ + P +LPEIA GRSNVGKSS +NA+T + + RTS+ PG T+ INF+K
Sbjct: 7 EFITSSDCLKNCPDFNLPEIAMIGRSNVGKSSFINAITNRKNLARTSNTPGKTRLINFYK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +L + DLPGYG+A + ++ W + +++Y++ R L V LID + V+ D ++
Sbjct: 67 INDELIITDLPGYGYAKTSKAEQEKWRKTLEDYLTNREPLAGVIQLIDARHSVQNNDIQM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ V TK DT+ + +I ++ N+ V P S+K+G G
Sbjct: 127 RDWLDYYNIPVITVATKVDTISKNQATKSVNEIAKTF---NTEVLP---FSAKTGIG 177
>gi|346473443|gb|AEO36566.1| hypothetical protein [Amblyomma maculatum]
Length = 282
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 11/202 (5%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQW-GV-VRTSDKPGLTQT 59
+ + F +A +P +LPE+A G SNVGKSS+L A+ Q GV VR S PG T+T
Sbjct: 74 HAVSFLTSAVRPQQYPQHNLPEVAVMGISNVGKSSLLRAIFSQSPGVTVRVSKTPGHTKT 133
Query: 60 INFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKP 119
+NFF +G +LCLVD+PGYGF K+ + +++S R +LKR L++D + G +
Sbjct: 134 LNFFAIGKELCLVDMPGYGFRQPKD-----FAVFSSQFLSGRENLKRTLLVMDAEQGFQD 188
Query: 120 RDHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEE---SLKANNSLVQPVMMVSS 176
D + I ++E + Y +VLTK D + + M I+E + QP +VS+
Sbjct: 189 YDQDAIEMLETLKAPYALVLTKIDKAKDSVILKNLMFIKELRDRYMSTLCFPQP-FLVSA 247
Query: 177 KSGAGIRSLRTVLSKIARFAKV 198
+ GI L++ ++ ++ V
Sbjct: 248 VTHEGIAFLQSFIAHLSGLLHV 269
>gi|331086217|ref|ZP_08335299.1| GTP-binding protein engB [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406376|gb|EGG85890.1| GTP-binding protein engB [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 205
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P D PEIAFAG+SNVGKSS++NAL + R S PG TQTINF+ + ++ L
Sbjct: 14 ITSKLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINEEMYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYG+A E+ K W +L+++Y+ T L+ V LLID + D + +
Sbjct: 74 VDLPGYGYAKVSEKEKIQWGKLIEKYLHTSKQLRAVFLLIDIRHEPSANDKMMYQWIVDQ 133
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLK 162
++ TK D + V + I+E L+
Sbjct: 134 GYNPIIIATKLDKIKRSQVQKHVKMIKEGLQ 164
>gi|167765941|ref|ZP_02437994.1| hypothetical protein CLOSS21_00432 [Clostridium sp. SS2/1]
gi|167712439|gb|EDS23018.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
SS2/1]
Length = 213
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P LPE+AFAG+SNVGKSS++NAL + R S +PG TQTIN++ + +L
Sbjct: 27 ITSKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTINYYNINEELYY 86
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYGFA + VK+ W +++ Y+ T LK V LLID + D + + +
Sbjct: 87 VDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKNDVMMYDWILHN 146
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ ++ TK D + V + +I L+ + P+ S+ S G
Sbjct: 147 GYRPVIIATKLDKLKRSQVPKHLKEIRTELQMDKE--TPIFPFSALSKQG 194
>gi|429763149|ref|ZP_19295506.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes hadrus
DSM 3319]
gi|429179398|gb|EKY20649.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes hadrus
DSM 3319]
Length = 213
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S P LPE+AFAG+SNVGKSS++NAL + R S +PG TQTIN++ + +L
Sbjct: 27 ITSKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTINYYNINEELYY 86
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYGFA + VK+ W +++ Y+ T LK V LLID + D + + +
Sbjct: 87 VDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKNDVMMYDWILHN 146
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
+ ++ TK D + V + +I L+ + P+ S+ S G
Sbjct: 147 GYRPVIIATKLDKLKRSQVPKHLKEIRTELQMDKE--TPIFPFSALSKQG 194
>gi|386820085|ref|ZP_10107301.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Joostella marina
DSM 19592]
gi|386425191|gb|EIJ39021.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Joostella marina
DSM 19592]
Length = 202
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
P LPE AF GRSNVGKSS++N LT + + +TS +PG TQ IN FK+ LVDLPG
Sbjct: 19 PNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQLINHFKINENWFLVDLPG 78
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YG+A ++VK +++ + +Y R L +LID + + D E + + Q +
Sbjct: 79 YGYAKVSKKVKSTFQKFITKYFEERQQLVSAFVLIDIRHDPQKIDMEFMQWLGEHQIPFS 138
Query: 137 VVLTKTDTVFPIDVARRAMQIEESLKANNSLVQP-VMMVSSKSGAGIRSLRTVLSKIAR 194
++ TK D + P + R + + L A+ P + SS SG G L + +I +
Sbjct: 139 IIFTKADKLKPKAIERDVKKYLDVLIADVWEEAPNYFITSSTSGTGKDELLEYIDQINK 197
>gi|15674911|ref|NP_269085.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes SF370]
gi|71910505|ref|YP_282055.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS5005]
gi|306827517|ref|ZP_07460800.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes ATCC 10782]
gi|386362545|ref|YP_006071876.1| putative GTP-binding protein engB [Streptococcus pyogenes Alab49]
gi|410680369|ref|YP_006932771.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes A20]
gi|421892638|ref|ZP_16323264.1| GTP-binding protein EngB [Streptococcus pyogenes NS88.2]
gi|24418393|sp|Q9A088.1|ENGB_STRP1 RecName: Full=Probable GTP-binding protein EngB
gi|13622052|gb|AAK33806.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes
M1 GAS]
gi|71853287|gb|AAZ51310.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|304430315|gb|EFM33341.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes ATCC 10782]
gi|350276954|gb|AEQ24322.1| putative GTP-binding protein engB [Streptococcus pyogenes Alab49]
gi|379981613|emb|CCG26986.1| GTP-binding protein EngB [Streptococcus pyogenes NS88.2]
gi|409692958|gb|AFV37818.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes A20]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 137 KYYDIPVIVVATKADKI 153
>gi|302671760|ref|YP_003831720.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
gi|302396233|gb|ADL35138.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
Length = 200
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 82/134 (61%)
Query: 12 VSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCL 71
++S+ P PE AFAG+SNVGKSS++N + + RTS +PG TQTIN++ + + L
Sbjct: 14 ITSTLPDNIHPEFAFAGKSNVGKSSLINGIMNRKNYARTSQEPGKTQTINYYNINDEFYL 73
Query: 72 VDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERS 131
VDLPGYGFA E+VK+ W ++++ Y+ T L RV LLID + D ++ +
Sbjct: 74 VDLPGYGFARVPEKVKEQWGKMIENYLHTSRQLLRVFLLIDIRHEPSANDVQMYKWIVHQ 133
Query: 132 QTKYQVVLTKTDTV 145
+ ++ TK+D +
Sbjct: 134 GFQPVIIATKSDKI 147
>gi|224585811|ref|YP_002639610.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|254783207|sp|C0Q3G7.1|ENGB_SALPC RecName: Full=Probable GTP-binding protein EngB
gi|224470339|gb|ACN48169.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 210
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 15 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVDGK 74
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 75 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRRSLQGLVVLMDIRHPLKDLDQQMIQWAV 134
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 135 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQ 191
Query: 188 VLS 190
L
Sbjct: 192 KLD 194
>gi|416058784|ref|ZP_11580682.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SCC393]
gi|347999450|gb|EGY40281.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SCC393]
Length = 230
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 83/142 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F ++ S P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 35 HKTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 94
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++ + EY+ R L + +L+D + +K D
Sbjct: 95 LFEVEPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLD 154
Query: 122 HELISLMERSQTKYQVVLTKTD 143
++I SQ ++LTK D
Sbjct: 155 QQMIKWAVASQLPVLLLLTKAD 176
>gi|416031612|ref|ZP_11572570.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
a str. H5P1]
gi|416066645|ref|ZP_11582050.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
f str. D18P1]
gi|429732448|ref|ZP_19267060.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans Y4]
gi|348001339|gb|EGY42088.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
a str. H5P1]
gi|348002640|gb|EGY43319.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
f str. D18P1]
gi|429156158|gb|EKX98796.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans Y4]
Length = 204
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F ++ S P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W++ + EY+ R L + +L+D + +K D
Sbjct: 69 LFEVEPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTV 145
++I SQ ++LTK D +
Sbjct: 129 QQMIKWAVASQLPVLLLLTKADKL 152
>gi|345864937|ref|ZP_08817132.1| putative GTP-binding protein EngB [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124017|gb|EGW53902.1| putative GTP-binding protein EngB [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 201
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 3/183 (1%)
Query: 8 AAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGT 67
+AAK+S + PA E+AFAGRSN GKSS LN L Q + RTS PG TQ +NFF L
Sbjct: 13 SAAKLSQA-PADQGIEVAFAGRSNAGKSSALNLLCNQKSLARTSKTPGRTQLLNFFGLDE 71
Query: 68 KLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISL 127
+ LVDLPGYG+A E+VK W+ + +Y++ R L+ + L++D + +K D +++
Sbjct: 72 QRRLVDLPGYGYAKVAEQVKTIWQSALADYIAQRECLRGLILMMDVRHPLKKFDIQMLEW 131
Query: 128 MERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
++LTK D + P R ++E L + + + SS GI
Sbjct: 132 NIHHGLPTHILLTKADKLKPGAAQRTLRSVQEELAEFPEIT--LQLFSSLKRQGIDEAHE 189
Query: 188 VLS 190
VL
Sbjct: 190 VLD 192
>gi|71903337|ref|YP_280140.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS6180]
gi|119369273|sp|Q48U21.1|ENGB_STRPM RecName: Full=Probable GTP-binding protein EngB
gi|71802432|gb|AAX71785.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPKDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 137 KYYDIPVIVVATKADKI 153
>gi|21910141|ref|NP_664409.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS315]
gi|28896160|ref|NP_802510.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes SSI-1]
gi|342162549|sp|P0DA92.1|ENGB_STRP3 RecName: Full=Probable GTP-binding protein EngB
gi|342162550|sp|P0DA93.1|ENGB_STRPQ RecName: Full=Probable GTP-binding protein EngB
gi|21904334|gb|AAM79212.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811410|dbj|BAC64343.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes
SSI-1]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ VV TK D +
Sbjct: 137 KYYDIPVIVVATKADKI 153
>gi|403379302|ref|ZP_10921359.1| GTP-binding protein YsxC [Paenibacillus sp. JC66]
Length = 195
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ + EF +A S+ +P LPEIA AGRSNVGKSS++N + + + RTS +PG TQT+
Sbjct: 3 IKQAEFVISAVSSAQYPNDALPEIALAGRSNVGKSSLINRMLGRKNLARTSSQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++++ +L VDLPGYG+A + ++ W + ++ Y+ R LK + LL+D +
Sbjct: 63 NYYRINEQLFFVDLPGYGYAKVSKTMRAEWGKFIERYLLEREPLKLLLLLVDLRHPPTKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + + VV TK D + AR + Q++E+L+ + ++ P++M SS++G
Sbjct: 123 DQAMYEWLHYHEIPLCVVATKADKIPKGKWARHSKQVKETLQLDPAI--PLIMFSSETGM 180
Query: 181 GIRSLRTVLSK 191
G L ++ +
Sbjct: 181 GKDELWAIIEQ 191
>gi|357238648|ref|ZP_09125984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
ictaluri 707-05]
gi|356752370|gb|EHI69495.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
ictaluri 707-05]
Length = 199
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 83/137 (60%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF + K
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++ +
Sbjct: 77 LRFVDVPGYGYAKVSKTERARWGKMIEEYMTSRDNLRAVVSLVDLRHEPSKEDIQMYEFL 136
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + VV TK D +
Sbjct: 137 KYYEIPVIVVATKADKI 153
>gi|116627470|ref|YP_820089.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus LMD-9]
gi|386086275|ref|YP_006002149.1| GTPase EngB [Streptococcus thermophilus ND03]
gi|386344274|ref|YP_006040438.1| GTP-binding protein EngB [Streptococcus thermophilus JIM 8232]
gi|387909367|ref|YP_006339673.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus MN-ZLW-002]
gi|122267932|sp|Q03LM9.1|ENGB_STRTD RecName: Full=Probable GTP-binding protein EngB
gi|116100747|gb|ABJ65893.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
gi|312277988|gb|ADQ62645.1| GTPase EngB [Streptococcus thermophilus ND03]
gi|339277735|emb|CCC19483.1| putative GTP-binding protein EngB [Streptococcus thermophilus JIM
8232]
gi|387574302|gb|AFJ83008.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus MN-ZLW-002]
Length = 199
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P DLPE+A AGRSNVGKSS +N L + + RTS KPG TQ +NF+
Sbjct: 13 EILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYN 72
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A ++ + W ++++EY+ TR +L+ V L+D + D ++
Sbjct: 73 IDDKLRFVDVPGYGYARVSKKARAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQM 132
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + VV TK D +
Sbjct: 133 YEFLKYYEIPVIVVATKADKI 153
>gi|421448637|ref|ZP_15898029.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396072584|gb|EJI80893.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
Length = 210
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Query: 18 APD---LP-----EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKL 69
APD LP E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 15 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVEGK 74
Query: 70 CLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLME 129
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 75 RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAV 134
Query: 130 RSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGIRSLRT 187
S + V+LTK D + AR+A + E++ A N VQ V SS G+ LR
Sbjct: 135 ESNIQVLVLLTKADKL--ASGARKAQLNMVREAVLAFNGDVQ-VDAFSSLKKQGVDKLRQ 191
Query: 188 VLS 190
L
Sbjct: 192 KLD 194
>gi|343518679|ref|ZP_08755669.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus
pittmaniae HK 85]
gi|343393594|gb|EGV06149.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus
pittmaniae HK 85]
Length = 205
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A + PA + EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFLTSAPNIRAIPADEGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ LVDLPGYG+A E++K W++ + EY+ R L + +L+D + +K D
Sbjct: 69 LFEVENGCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQHRQCLAGLVVLMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++I ++ ++LTK D + +++ + E++ +Q V S++S G
Sbjct: 129 QQMIDWAVSAELPVLLLLTKADKLSQSARSKQVKMVREAILPFQGDIQ-VEAFSAQSKLG 187
Query: 182 IRSL 185
I L
Sbjct: 188 IDKL 191
>gi|410620669|ref|ZP_11331529.1| GTP-binding protein [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159776|dbj|GAC26903.1| GTP-binding protein [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 209
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Query: 3 KLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINF 62
K F +A D E+AFAGRSN GKSS LN LTRQ G+ RTS PG TQ IN
Sbjct: 6 KATFLTSAPSIDHLTNSDGMEVAFAGRSNAGKSSALNTLTRQKGLARTSKTPGRTQLINM 65
Query: 63 FKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDH 122
F+L + LVDLPGYG+A E+K W++ + EY+ R LK + +L+D + +K D
Sbjct: 66 FELDDERRLVDLPGYGYAKVPLEMKLKWQKSLGEYLQQRKCLKGLVVLMDIRHPLKDLDQ 125
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGI 182
LI ++LTK D + + + + E+ A V V SS +G G+
Sbjct: 126 NLIHWAVEVNLPVLILLTKADKLKSGKRKAQTLMVREAAMAFCGDV-TVHSFSSLNGLGV 184
Query: 183 RSLRTVLSK 191
L +L K
Sbjct: 185 PELEQILFK 193
>gi|251793793|ref|YP_003008523.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
aphrophilus NJ8700]
gi|416894207|ref|ZP_11925003.1| GTP-binding protein [Aggregatibacter aphrophilus ATCC 33389]
gi|247535190|gb|ACS98436.1| GTP-binding protein [Aggregatibacter aphrophilus NJ8700]
gi|347813556|gb|EGY30223.1| GTP-binding protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 204
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 90/160 (56%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
+K F +A S P EIAFAGRSN GKS+ LNALT Q + RTS PG TQ IN
Sbjct: 9 HKTHFLTSAPNLKSLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F++ + LVDLPGYG+A E++K W+ + EY+ R L + +L+D + +K D
Sbjct: 69 LFEVEPQCKLVDLPGYGYAAVPEQMKQQWQHALGEYLQKRECLAGIIVLMDIRHPLKDLD 128
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESL 161
++I + ++LTK D + + +++ + E++
Sbjct: 129 QQMIEWAVSADLPILLLLTKADKLSQSERSKQVKMVREAI 168
>gi|285017649|ref|YP_003375360.1| GTP-binding protein [Xanthomonas albilineans GPE PC73]
gi|283472867|emb|CBA15372.1| probable gtp-binding protein [Xanthomonas albilineans GPE PC73]
Length = 207
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ + + +A + P D E+AFAGRSN GKSS LNALTRQ + R S PG TQ +
Sbjct: 5 LERAHYLLSAHNARQLPDDDGWEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQL 64
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
FF++ + LVDLPGYG+A +E++ W+ + Y TR +L+ + +++D + +K
Sbjct: 65 VFFQVQPERYLVDLPGYGYAKVPQELQAHWQSFIDTYFRTRQALRGLVVVMDIRHPLKDY 124
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQI-EESLKANNSLVQPVMMVSSKSG 179
D +++S + +LTK D + A+ Q+ +E LKA V V S S
Sbjct: 125 DRQMLSYAVQRGLPAHALLTKADKLGRGQQAQALQQVRKELLKAFGDTV-GVQTFSGASR 183
Query: 180 AGIRSLRTVLS 190
G+ R ++
Sbjct: 184 QGVDEARAIVG 194
>gi|340357280|ref|ZP_08679900.1| ribosome biogenesis GTP-binding protein YsxC [Sporosarcina
newyorkensis 2681]
gi|339617915|gb|EGQ22524.1| ribosome biogenesis GTP-binding protein YsxC [Sporosarcina
newyorkensis 2681]
Length = 193
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 2/182 (1%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ +E +A +P PE A AGRSNVGKSS +N + + + RTS KPG TQT+
Sbjct: 3 VHNVEMIMSAVKPEQYPTEGYPEFALAGRSNVGKSSFINKMIGRKSLARTSSKPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ +L VD+PGYG+A + ++AW ++++ Y++ R L+ V L++D +
Sbjct: 63 NFYKIEEQLFFVDVPGYGYAKVSKTEREAWGKMIERYITAREELRAVLLIVDLRHPPTED 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGA 180
D + + VV TK D + + + +L N P+++ SS+ G
Sbjct: 123 DCMMYDFLAHYNVPTIVVATKADKIPKGKWEKHKKVVRTTL--NMEKHHPLLLFSSEKGM 180
Query: 181 GI 182
GI
Sbjct: 181 GI 182
>gi|423135988|ref|ZP_17123633.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 101113]
gi|371639193|gb|EHO04811.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 101113]
Length = 206
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N EF + + P +PE AF GRSNVGKSS++N LT Q + +TS +PG TQ I
Sbjct: 3 INTAEFVVSNSDAKKCPNEPIPEYAFIGRSNVGKSSLINMLTNQKYLAKTSSRPGKTQLI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N FK+ + LVDLPGYG+A ++ K +++ + +Y R L +L+D + +
Sbjct: 63 NHFKINSNWYLVDLPGYGYAKVSKKTKAVFQKFITDYFENRQQLVSAFVLVDIRHEAQKI 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANN-SLVQPVMMVSSKSG 179
D E + + ++ + ++ TK D V VA + + A+N + P + SS+
Sbjct: 123 DLEFMQYLGETEVPFSIIFTKADKVGKQKVASLIADYRKKMLADNWEEMPPCFVTSSEDK 182
Query: 180 AGIRSLRTVLSKI 192
G + + +I
Sbjct: 183 TGRDEVLNYIEEI 195
>gi|386017734|ref|YP_005936033.1| GTP-binding protein EngB [Pantoea ananatis AJ13355]
gi|327395815|dbj|BAK13237.1| probable GTP-binding protein EngB [Pantoea ananatis AJ13355]
Length = 246
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 81/138 (58%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F++
Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
LVDLPGYG+A EE+K W+ + EY+ R +LK + +L+D + +K D ++I
Sbjct: 106 AEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHPLKDLDQQMI 165
Query: 126 SLMERSQTKYQVVLTKTD 143
S+ ++LTK D
Sbjct: 166 QWAVESEIPVLLLLTKAD 183
>gi|255994399|ref|ZP_05427534.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saphenum
ATCC 49989]
gi|255993112|gb|EEU03201.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saphenum
ATCC 49989]
Length = 205
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 81/145 (55%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+N + A FP LPEIAFAGRSNVGKSS+LN LT + + + S KPG T+TI
Sbjct: 3 INNVSLEAVCGRVDQFPDETLPEIAFAGRSNVGKSSLLNMLTGRKSLAKISSKPGKTRTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + +VDLPGYGFA A + W +L++ Y+ R +L V LID +
Sbjct: 63 NFYNVDDAFRIVDLPGYGFARAPRSEMEKWAKLIETYIEKRGNLIAVTSLIDIRHDPTDL 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D +L ++ VVLTK D +
Sbjct: 123 DRQLCLYLKEMNLLKTVVLTKADKI 147
>gi|24379393|ref|NP_721348.1| GTP-binding protein YsxC [Streptococcus mutans UA159]
gi|290580605|ref|YP_003484997.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|387786257|ref|YP_006251353.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
LJ23]
gi|449865403|ref|ZP_21778961.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
U2B]
gi|449869814|ref|ZP_21780308.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
8ID3]
gi|449875692|ref|ZP_21782364.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
S1B]
gi|449892497|ref|ZP_21788501.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SF12]
gi|449898076|ref|ZP_21790404.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
R221]
gi|449904144|ref|ZP_21792523.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
M230]
gi|449908175|ref|ZP_21793551.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
OMZ175]
gi|449914913|ref|ZP_21795913.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
15JP3]
gi|449936821|ref|ZP_21804197.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
2ST1]
gi|449958286|ref|ZP_21809684.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
4VF1]
gi|449971296|ref|ZP_21814337.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
2VS1]
gi|449980040|ref|ZP_21816961.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
5SM3]
gi|449984426|ref|ZP_21819053.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NFSM2]
gi|449989540|ref|ZP_21821120.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NVAB]
gi|449999647|ref|ZP_21824616.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
N29]
gi|450011045|ref|ZP_21828971.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
A19]
gi|450023361|ref|ZP_21830558.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
U138]
gi|450029482|ref|ZP_21832686.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
G123]
gi|450040662|ref|ZP_21836945.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
T4]
gi|450059609|ref|ZP_21843492.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML4]
gi|450063443|ref|ZP_21844909.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML5]
gi|450067273|ref|ZP_21846527.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML9]
gi|450077439|ref|ZP_21850439.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
N3209]
gi|450080959|ref|ZP_21851404.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
N66]
gi|450086509|ref|ZP_21853704.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NV1996]
gi|450093756|ref|ZP_21856742.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
W6]
gi|450105815|ref|ZP_21860123.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SF14]
gi|450121404|ref|ZP_21866303.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
ST6]
gi|450137205|ref|ZP_21871497.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML1]
gi|450145618|ref|ZP_21874650.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
1ID3]
gi|450154200|ref|ZP_21877617.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
21]
gi|450158617|ref|ZP_21878933.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
66-2A]
gi|450182410|ref|ZP_21888313.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
24]
gi|81845282|sp|Q8DUH9.1|ENGB_STRMU RecName: Full=Probable GTP-binding protein EngB
gi|24377323|gb|AAN58654.1|AE014935_6 putative GTP-binding protein [Streptococcus mutans UA159]
gi|254997504|dbj|BAH88105.1| putative GTP-binding protein [Streptococcus mutans NN2025]
gi|379132658|dbj|BAL69410.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
LJ23]
gi|449149126|gb|EMB52941.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
1ID3]
gi|449157301|gb|EMB60745.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
15JP3]
gi|449157711|gb|EMB61147.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
8ID3]
gi|449165146|gb|EMB68169.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
2ST1]
gi|449170093|gb|EMB72826.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
4VF1]
gi|449172291|gb|EMB74922.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
2VS1]
gi|449177447|gb|EMB79748.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
5SM3]
gi|449180225|gb|EMB82393.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NFSM2]
gi|449182502|gb|EMB84526.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NVAB]
gi|449186778|gb|EMB88594.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
N29]
gi|449189828|gb|EMB91456.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
A19]
gi|449193457|gb|EMB94839.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
U138]
gi|449194408|gb|EMB95764.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
G123]
gi|449198646|gb|EMB99751.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
T4]
gi|449202926|gb|EMC03813.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML4]
gi|449204740|gb|EMC05526.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML5]
gi|449208209|gb|EMC08826.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML9]
gi|449211244|gb|EMC11658.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
N3209]
gi|449215720|gb|EMC15899.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
N66]
gi|449217022|gb|EMC17100.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
W6]
gi|449219467|gb|EMC19434.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NV1996]
gi|449223984|gb|EMC23641.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SF14]
gi|449229269|gb|EMC28593.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
ST6]
gi|449235649|gb|EMC34598.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML1]
gi|449238046|gb|EMC36833.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
21]
gi|449242115|gb|EMC40718.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
66-2A]
gi|449244783|gb|EMC43144.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
24]
gi|449253655|gb|EMC51601.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
S1B]
gi|449256118|gb|EMC53952.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SF12]
gi|449259826|gb|EMC57343.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
M230]
gi|449260372|gb|EMC57874.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
R221]
gi|449263142|gb|EMC60575.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
OMZ175]
gi|449264254|gb|EMC61600.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
U2B]
Length = 197
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ++NF+ + KL VD
Sbjct: 20 SHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQSLNFYNIDDKLRFVD 79
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A ++ + W ++++EY+++R +L+ V L+D + D ++ ++ +
Sbjct: 80 VPGYGYAKVSKKERAKWGKMIEEYLTSRENLRAVVSLVDFRHDPSSDDVQMYDFLKYYEI 139
Query: 134 KYQVVLTKTDTV 145
+V TK D V
Sbjct: 140 PVILVATKADKV 151
>gi|16079871|ref|NP_390697.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
subsp. subtilis str. 168]
gi|221310759|ref|ZP_03592606.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. 168]
gi|221315084|ref|ZP_03596889.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320003|ref|ZP_03601297.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324285|ref|ZP_03605579.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SMY]
gi|321312351|ref|YP_004204638.1| GTP-binding protein YsxC [Bacillus subtilis BSn5]
gi|384176403|ref|YP_005557788.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|402776976|ref|YP_006630920.1| ribosome 50S subunit assembly GTPase [Bacillus subtilis QB928]
gi|418031998|ref|ZP_12670481.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280277|ref|YP_005562012.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195]
gi|430755953|ref|YP_007208676.1| GTP-binding protein EngB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|443632146|ref|ZP_21116326.1| GTPase EngB [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|449095262|ref|YP_007427753.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis XF-1]
gi|452915110|ref|ZP_21963736.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
MB73/2]
gi|586754|sp|P38424.1|ENGB_BACSU RecName: Full=Probable GTP-binding protein EngB
gi|49259156|pdb|1SUL|A Chain A, Crystal Structure Of The Apo-Ysxc
gi|49259157|pdb|1SUL|B Chain B, Crystal Structure Of The Apo-Ysxc
gi|49259162|pdb|1SVI|A Chain A, Crystal Structure Of The Gtp-Binding Protein Ysxc
Complexed With Gdp
gi|49259165|pdb|1SVW|A Chain A, Crystal Structure Of Ysxc Complexed With Gmppnp
gi|49259166|pdb|1SVW|B Chain B, Crystal Structure Of Ysxc Complexed With Gmppnp
gi|496558|emb|CAA53985.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
168]
gi|1770079|emb|CAA99541.1| hypothetical protein [Bacillus subtilis]
gi|2635284|emb|CAB14779.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis
subsp. subtilis str. 168]
gi|291485234|dbj|BAI86309.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195]
gi|320018625|gb|ADV93611.1| GTP-binding protein YsxC [Bacillus subtilis BSn5]
gi|349595627|gb|AEP91814.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470861|gb|EHA30982.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SC-8]
gi|402482156|gb|AFQ58665.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis
QB928]
gi|407960015|dbj|BAM53255.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
BEST7613]
gi|407965658|dbj|BAM58897.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
BEST7003]
gi|430020473|gb|AGA21079.1| GTP-binding protein EngB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|443348261|gb|ELS62318.1| GTPase EngB [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|449029177|gb|AGE64416.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis XF-1]
gi|452115458|gb|EME05854.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
MB73/2]
Length = 195
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E +A +P LPEIA AGRSNVGKSS +N+L + + RTS KPG TQT+
Sbjct: 3 VTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+ + +L VD+PGYGFA + ++AW +++ Y++TR LK V ++D +
Sbjct: 63 NFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSND 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D ++ ++ V+ TK D +
Sbjct: 123 DVQMYEFLKYYGIPVIVIATKADKI 147
>gi|320167719|gb|EFW44618.1| GTPase EngB [Capsaspora owczarzaki ATCC 30864]
Length = 617
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 17 PAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
P PE A GRSNVGKSS++NAL +VRTS PG T+T+NFF +G ++ +VD PG
Sbjct: 262 PPEKYPEFAVIGRSNVGKSSLINALVHSTTLVRTSATPGHTKTLNFFSIGRRIGVVDCPG 321
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ 136
YG+ A+EE W + + +STR ++++V LLID G+K D E++ L+E + +Q
Sbjct: 322 YGY-RAQEE----WMDNLGTMLSTRSTIRQVLLLIDPMHGLKTTDLEVMQLLEELEKPFQ 376
Query: 137 VVLTKTD 143
+V TK+D
Sbjct: 377 IVFTKSD 383
>gi|262282293|ref|ZP_06060061.1| GTPase EngB [Streptococcus sp. 2_1_36FAA]
gi|262261584|gb|EEY80282.1| GTPase EngB [Streptococcus sp. 2_1_36FAA]
Length = 197
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 83/141 (58%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P D+PEIA AGRSNVGKSS +N + + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A + + W +++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDNKLRFVDVPGYGYAKVSKTERAKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVILVATKADKI 149
>gi|410447017|ref|ZP_11301119.1| ribosome biogenesis GTP-binding protein YsxC [SAR86 cluster
bacterium SAR86E]
gi|409980004|gb|EKO36756.1| ribosome biogenesis GTP-binding protein YsxC [SAR86 cluster
bacterium SAR86E]
Length = 194
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYA 82
EI +GRSN GKSS LNALT+ + R S PG T INFF + L+DLPGYGFA +
Sbjct: 27 EILLSGRSNAGKSSALNALTQNKKLARISKTPGRTTEINFFLVEDNFKLLDLPGYGFAKS 86
Query: 83 KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKT 142
K W L+ EY R + K V + +D + +KP D E+I E T Y +VLTK+
Sbjct: 87 GHSRKKDWGPLLGEYFKNREARKAVLIFMDIRHPLKPIDLEMIKFCESYNTAYVLVLTKS 146
Query: 143 DTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
D V + + Q+ A V+ +SS G LR VL
Sbjct: 147 DKVSKNILIKTIQQVSRETNA-----HEVLAISSLKETGFEKLRKVL 188
>gi|291619507|ref|YP_003522249.1| EngB [Pantoea ananatis LMG 20103]
gi|291154537|gb|ADD79121.1| EngB [Pantoea ananatis LMG 20103]
Length = 246
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 81/138 (58%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P+ E+AFAGRSN GKSS LN LT Q G+ RTS PG TQ IN F++
Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
LVDLPGYG+A EE+K W+ + EY+ R +LK + +L+D + +K D ++I
Sbjct: 106 AEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHPLKDLDQQMI 165
Query: 126 SLMERSQTKYQVVLTKTD 143
S+ ++LTK D
Sbjct: 166 QWAVESEIPVLLLLTKAD 183
>gi|387879643|ref|YP_006309946.1| GTP-binding protein [Streptococcus parasanguinis FW213]
gi|419799945|ref|ZP_14325260.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0449]
gi|385696625|gb|EIG27098.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0449]
gi|386793096|gb|AFJ26131.1| GTP-binding protein, putative [Streptococcus parasanguinis FW213]
Length = 200
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 85/137 (62%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P ++PE+A AGRSNVGKSS +N L + + RTS KPG TQ +NFF + K
Sbjct: 13 SAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDDK 72
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVD+PGYG+A ++ ++ W +++EY+++R +LK V L+D + D ++ +
Sbjct: 73 LRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDVQMYEFL 132
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + +V TK D +
Sbjct: 133 KYYEIPVILVATKADKI 149
>gi|372209967|ref|ZP_09497769.1| GTP-binding protein YsxC [Flavobacteriaceae bacterium S85]
Length = 205
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
EF + S P+ ++PE AF GRSNVGKSS++N LT + + +TS PG TQ IN FK
Sbjct: 7 EFVISNSEVSKCPSENIPEYAFIGRSNVGKSSLINMLTGRNKLAKTSSTPGKTQLINHFK 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A + K ++ + Y R L +LID++ + D +
Sbjct: 67 INNNWFLVDLPGYGYAKVSKSTKKEFQSFITSYFKQRKELVCTFVLIDSRHSPQKIDVDF 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSS 176
+ + ++ + ++ TKTD + P +A+ + +ES+ N P SS
Sbjct: 127 MEFLAENEIPFCMIFTKTDKLKPKAIAQNITKYKESMLKGNWAAFPTYFTSS 178
>gi|312866664|ref|ZP_07726878.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0405]
gi|311097745|gb|EFQ55975.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0405]
Length = 200
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 85/137 (62%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P ++PE+A AGRSNVGKSS +N L + + RTS KPG TQ +NFF + K
Sbjct: 13 SAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDDK 72
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVD+PGYG+A ++ ++ W +++EY+++R +LK V L+D + D ++ +
Sbjct: 73 LRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDVQMYEFL 132
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + +V TK D +
Sbjct: 133 KYYEIPVILVATKADKI 149
>gi|387891182|ref|YP_006321480.1| putative GTP-binding protein of the COG0218 family [Escherichia
blattae DSM 4481]
gi|386926015|gb|AFJ48969.1| putative GTP-binding protein of the COG0218 family [Escherichia
blattae DSM 4481]
Length = 251
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 48 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 107
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W++ + EY+ R L+ + +L+D + +K D ++
Sbjct: 108 VAEGKRLVDLPGYGYAEVPEEMKRKWQKALAEYLHKRQCLQGLVILMDIRHPLKDLDQQM 167
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I+ S + V+LTK D + AR+A + E++ A N VQ V + SS G+
Sbjct: 168 IAWAVDSNLQVLVLLTKADKL--ASGARKAQLNMVREAVVAFNGDVQ-VEVFSSLKKLGV 224
Query: 183 RSLRTVL 189
L+ L
Sbjct: 225 DKLKHKL 231
>gi|343500983|ref|ZP_08738868.1| putative GTP-binding protein EngB [Vibrio tubiashii ATCC 19109]
gi|418478598|ref|ZP_13047697.1| GTP-binding protein EngB [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342819562|gb|EGU54405.1| putative GTP-binding protein EngB [Vibrio tubiashii ATCC 19109]
gi|384573753|gb|EIF04241.1| GTP-binding protein EngB [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 221
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A + P + E+AFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRALPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R LK + +L+D + +K D +L
Sbjct: 71 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + ++I++ V V SS G G+ +
Sbjct: 131 IFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGFGGDVS-VAAFSSLKGIGVDT 189
Query: 185 LRTVLSK 191
LR+ L +
Sbjct: 190 LRSKLDE 196
>gi|319651744|ref|ZP_08005870.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
gi|317396563|gb|EFV77275.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
Length = 193
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 103/178 (57%), Gaps = 4/178 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A +P +LPE A AGRSNVGKSS +N + + G+ R S KPG TQT+NF+
Sbjct: 7 EIVISAVKPDQYPESELPEFALAGRSNVGKSSFINKMLNRRGLARISSKPGKTQTLNFYL 66
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ L VD+PGYG+A ++ ++AW ++++ Y+++R LK V L++D + D +
Sbjct: 67 INEILHFVDVPGYGYAKVSKKEREAWGKMIETYLTSREQLKAVVLIVDLRHPPSSDDVMM 126
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQI-EESLKANNSLVQPVMMVSSKSGAG 181
++ V+ TK D + P ++ M+I +E+L + + ++M SS++G G
Sbjct: 127 YDFLKHYDIPCVVIATKADKI-PKSKWQKHMKITKETLDIDPN--DQIIMFSSETGYG 181
>gi|317050145|ref|YP_004117793.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b]
gi|316951762|gb|ADU71237.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b]
Length = 213
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVLSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R +LK + +L+D + +K D ++
Sbjct: 70 VVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRQALKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I +S+ V+LTK D + AR+A + E+ A VQ V M SS G+
Sbjct: 130 IEWAVQSEIPVLVLLTKADKL--ASGARKAQLNMVREASLAFQGDVQ-VEMFSSLKKLGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|161505499|ref|YP_001572611.1| hypothetical protein SARI_03659 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160866846|gb|ABX23469.1| hypothetical protein SARI_03659 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 198
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Query: 16 FPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLP 75
P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++ LVDLP
Sbjct: 9 LPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVDGKRLVDLP 68
Query: 76 GYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKY 135
GYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I S +
Sbjct: 69 GYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAVESNIQV 128
Query: 136 QVVLTKTDTVFPIDVARRAMQ--IEESLKANNSLVQPVMMVSSKSGAGIRSLRTVL 189
V+LTK D + AR+A + E++ A N VQ V SS G+ LR L
Sbjct: 129 LVLLTKADKL--ASGARKAQLNIVREAVLAFNGDVQ-VEAFSSLKKQGVDKLRQKL 181
>gi|354725733|ref|ZP_09039948.1| GTP-binding protein YsxC [Enterobacter mori LMG 25706]
Length = 209
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W+ + EY+ R LK + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRQCLKGLVVLMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I S V+LTK D + AR+A + E++ A N VQ V SS G+
Sbjct: 130 IDWAVESDIAVLVLLTKADKL--ASGARKAQVNMVREAVLAFNGDVQ-VEPFSSLKKQGV 186
Query: 183 RSLRTVLS 190
LR L
Sbjct: 187 DKLRQKLD 194
>gi|344201169|ref|YP_004785495.1| GTP-binding protein engB [Acidithiobacillus ferrivorans SS3]
gi|343776613|gb|AEM49169.1| GTP-binding protein engB [Acidithiobacillus ferrivorans SS3]
Length = 228
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 78/133 (58%)
Query: 13 SSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLV 72
+ PA D E+AFAGRSNVGKSS LN LT + + R S PG TQ IN F L LV
Sbjct: 26 AEQLPADDGVEVAFAGRSNVGKSSTLNMLTERRALARVSRTPGRTQAINIFDLDPGQRLV 85
Query: 73 DLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQ 132
DLPGYG+A E ++ +W L+++Y+ R SL+ + L++D + P D +LI+
Sbjct: 86 DLPGYGYAKVPEALRRSWGPLLEQYLRRRGSLRGLILVMDIRHPYGPHDADLIAFAAGCG 145
Query: 133 TKYQVVLTKTDTV 145
V+L KTD +
Sbjct: 146 RPVHVLLNKTDKL 158
>gi|254556940|ref|YP_003063357.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum JDM1]
gi|300768255|ref|ZP_07078160.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180929|ref|YP_003925057.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III]
gi|380032874|ref|YP_004889865.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum WCFS1]
gi|418275670|ref|ZP_12890993.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821641|ref|YP_007414803.1| putative GTP-binding protein EngB [Lactobacillus plantarum ZJ316]
gi|38257507|sp|Q88VE3.1|ENGB_LACPL RecName: Full=Probable GTP-binding protein EngB
gi|254045867|gb|ACT62660.1| GTPase EngB [Lactobacillus plantarum JDM1]
gi|300494319|gb|EFK29482.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046420|gb|ADN98963.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III]
gi|342242117|emb|CCC79351.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum WCFS1]
gi|376009221|gb|EHS82550.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275138|gb|AGE39657.1| putative GTP-binding protein EngB [Lactobacillus plantarum ZJ316]
Length = 197
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 87/145 (60%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
++ +E +A S +P PEI AGRSNVGKSS++N L + RTS +PG TQT+
Sbjct: 3 VHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQTL 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
NF+K+ +L VD+PGYG+A ++ ++ W ++++ Y+++R +L+ V +L+D +
Sbjct: 63 NFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTSRETLRGVVILVDARHAPTKD 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTV 145
D + M + VV TK+D +
Sbjct: 123 DVAMYEWMRYYEMPLLVVATKSDKI 147
>gi|414594471|ref|ZP_11444107.1| putative GTP-binding protein EngB [Escherichia blattae NBRC 105725]
gi|403194466|dbj|GAB81759.1| putative GTP-binding protein EngB [Escherichia blattae NBRC 105725]
Length = 213
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F+
Sbjct: 10 HFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFE 69
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ LVDLPGYG+A EE+K W++ + EY+ R L+ + +L+D + +K D ++
Sbjct: 70 VAEGKRLVDLPGYGYAEVPEEMKRKWQKALAEYLHKRQCLQGLVILMDIRHPLKDLDQQM 129
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAM--QIEESLKANNSLVQPVMMVSSKSGAGI 182
I+ S + V+LTK D + AR+A + E++ A N VQ V + SS G+
Sbjct: 130 IAWAVDSNLQVLVLLTKADKL--ASGARKAQLNMVREAVVAFNGDVQ-VEVFSSLKKLGV 186
Query: 183 RSLRTVLS 190
L+ L
Sbjct: 187 DKLKHKLD 194
>gi|337282066|ref|YP_004621537.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis ATCC 15912]
gi|335369659|gb|AEH55609.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis ATCC 15912]
Length = 200
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 86/141 (60%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
+ +A S +P ++PE+A AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 DILLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL LVD+PGYG+A ++ ++ W +++EY+++R +LK V L+D + D ++
Sbjct: 69 IDDKLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRKNLKAVVSLVDFRHEPSADDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + +V TK D +
Sbjct: 129 YEFLKYYEIPVILVATKADKI 149
>gi|323499674|ref|ZP_08104642.1| putative GTP-binding protein EngB [Vibrio sinaloensis DSM 21326]
gi|323315275|gb|EGA68318.1| putative GTP-binding protein EngB [Vibrio sinaloensis DSM 21326]
Length = 221
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
F +A P + E+AFAGRSN GKSS LN LT Q + +TS PG TQ IN FK
Sbjct: 11 HFITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFK 70
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ +VDLPGYGFA E+K W++ + EY+ R SLK + +L+D + +K D +L
Sbjct: 71 VTDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHPMKDLDQQL 130
Query: 125 ISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRS 184
I S QV+LTK D + + ++I++ V V SS G G+
Sbjct: 131 IFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGFGGDVS-VAAFSSLKGIGVDV 189
Query: 185 LRTVLSK 191
LR+ L +
Sbjct: 190 LRSKLDE 196
>gi|315221694|ref|ZP_07863610.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus F0211]
gi|421491017|ref|ZP_15938384.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus SK1138]
gi|315189181|gb|EFU22880.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus F0211]
gi|400372014|gb|EJP24963.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus SK1138]
Length = 195
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%)
Query: 5 EFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFK 64
E +A S +P ++PEIA AGRSNVGKSS +N L + + RTS KPG TQ +NFF
Sbjct: 9 EILLSAANKSHYPQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFN 68
Query: 65 LGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
+ KL VD+PGYG+A + + W ++++EY+++R +L+ V L+D + D ++
Sbjct: 69 IDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDVRHEPSTDDVQM 128
Query: 125 ISLMERSQTKYQVVLTKTDTV 145
++ + VV TK D V
Sbjct: 129 YEFLKYYEIPVIVVATKADKV 149
>gi|125973114|ref|YP_001037024.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum ATCC 27405]
gi|256003908|ref|ZP_05428894.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum
DSM 2360]
gi|281417306|ref|ZP_06248326.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum JW20]
gi|385778980|ref|YP_005688145.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum DSM 1313]
gi|419723004|ref|ZP_14250139.1| GTP-binding protein engB [Clostridium thermocellum AD2]
gi|419725092|ref|ZP_14252147.1| GTP-binding protein engB [Clostridium thermocellum YS]
gi|125713339|gb|ABN51831.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum ATCC 27405]
gi|255992036|gb|EEU02132.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum
DSM 2360]
gi|281408708|gb|EFB38966.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum JW20]
gi|316940660|gb|ADU74694.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum DSM 1313]
gi|380771712|gb|EIC05577.1| GTP-binding protein engB [Clostridium thermocellum YS]
gi|380780771|gb|EIC10434.1| GTP-binding protein engB [Clostridium thermocellum AD2]
Length = 207
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F A +P DLPEI F GRSNVGKSS++N + + + + + PG T+ INF+ +
Sbjct: 14 FEITAVRPEQYPKNDLPEITFVGRSNVGKSSLINTMLNRKNLAKVAATPGRTRVINFYNI 73
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD---H 122
KL VDLPGYGFA + +K W+++++ Y+ R LK+V +L+D + D H
Sbjct: 74 DDKLYFVDLPGYGFAKVPKTMKTGWKDIIETYLIERKQLKKVIMLVDIRHSPTSDDVLMH 133
Query: 123 ELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
E + M +S Y VV TK D + + R I LK + + ++ SS++ G
Sbjct: 134 EWLKAMRKS---YVVVATKLDKIPRTKIKERISDIRSILKLEDDV--KIIPFSSETRQG 187
>gi|414155604|ref|ZP_11411915.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0442]
gi|410872829|gb|EKS20768.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0442]
Length = 200
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 85/137 (62%)
Query: 9 AAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK 68
+A S +P ++PE+A AGRSNVGKSS +N L + + RTS KPG TQ +NFF + K
Sbjct: 13 SAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDDK 72
Query: 69 LCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLM 128
L LVD+PGYG+A ++ ++ W +++EY+++R +LK V L+D + D ++ +
Sbjct: 73 LRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDIQMYEFL 132
Query: 129 ERSQTKYQVVLTKTDTV 145
+ + +V TK D +
Sbjct: 133 KYYEIPVILVATKADKI 149
>gi|315650625|ref|ZP_07903685.1| ribosome biogenesis GTP-binding protein YsxC [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315487122|gb|EFU77444.1| ribosome biogenesis GTP-binding protein YsxC [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 197
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 93/168 (55%)
Query: 1 MNKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI 60
+ K E ++S FP PEI FAG+SNVGKSS++NAL + + RTS KPG TQTI
Sbjct: 3 IKKAELETVCGITSKFPDNSEPEIVFAGKSNVGKSSLINALMNRKSLARTSGKPGKTQTI 62
Query: 61 NFFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPR 120
N++K+ ++ VDLPGYG+A A ++ W ++++ Y+ T +K + LLID +
Sbjct: 63 NYYKVNDEIYFVDLPGYGYANANLATREKWGKMIERYLHTSKQIKCIFLLIDIRHEPGKN 122
Query: 121 DHELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLV 168
D ++ + + ++ TK D + +A+ + E L +V
Sbjct: 123 DKQMYDWIVYNGYSPVIIATKLDKLKRSQIAKCIKTLREGLGLQKEVV 170
>gi|450115793|ref|ZP_21864105.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
ST1]
gi|449227607|gb|EMC27019.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
ST1]
Length = 197
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ++NF+ + KL VD
Sbjct: 20 SHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQSLNFYNIDDKLRFVD 79
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A ++ + W ++++EY+++R +L+ V L+D + D ++ ++ +
Sbjct: 80 VPGYGYAKVSKKERAKWGKMIEEYLTSRENLRAVVSLVDFRHDPSSDDVQMYDFLKYYEI 139
Query: 134 KYQVVLTKTDTV 145
+V TK D V
Sbjct: 140 PVILVATKADKV 151
>gi|449884065|ref|ZP_21785481.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SA38]
gi|450005786|ref|ZP_21826857.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NMT4863]
gi|450133177|ref|ZP_21870486.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML8]
gi|449151749|gb|EMB55474.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NLML8]
gi|449188242|gb|EMB89965.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
NMT4863]
gi|449249352|gb|EMC47487.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans
SA38]
Length = 197
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVD 73
S +P DLPEIA AGRSNVGKSS +N L + + RTS KPG TQ++NF+ + KL VD
Sbjct: 20 SHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQSLNFYNIDDKLRFVD 79
Query: 74 LPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+PGYG+A ++ + W ++++EY+++R +L+ V L+D + D ++ ++ +
Sbjct: 80 VPGYGYAKVSKKERAKWGKMIEEYLTSRENLRAVVSLVDFRHDPSSDDVQMYDFLKYYEI 139
Query: 134 KYQVVLTKTDTV 145
+V TK D V
Sbjct: 140 PVILVATKADKV 151
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,680,978,283
Number of Sequences: 23463169
Number of extensions: 98533703
Number of successful extensions: 369580
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3336
Number of HSP's successfully gapped in prelim test: 9074
Number of HSP's that attempted gapping in prelim test: 359026
Number of HSP's gapped (non-prelim): 15507
length of query: 198
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 63
effective length of database: 9,191,667,552
effective search space: 579075055776
effective search space used: 579075055776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)