RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 029158
(198 letters)
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 98.7 bits (244), Expect = 1e-26
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 2 NKLEFFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN 61
K E +A +P LPEIA AGRSNVGKSS +N+L + + RTS KPG TQT+N
Sbjct: 4 TKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLN 63
Query: 62 FFKLGTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRD 121
F+ + +L VD+PGYGFA + ++AW +++ Y++TR LK V ++D + D
Sbjct: 64 FYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDD 123
Query: 122 HELISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
++ ++ V+ TK D + + A + ++L + +++ SS++ G
Sbjct: 124 VQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPE--DELILFSSETKKG 181
Query: 182 IRSLRTVLSKI 192
+ K+
Sbjct: 182 KDEAWGAIKKM 192
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 90.6 bits (223), Expect = 1e-23
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
Query: 6 FFAAAKVSSSFPAPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL 65
F +A P+ E+AFAGRSN GKSS LN LT Q + RTS PG TQ IN F++
Sbjct: 1 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 60
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
LVDLPGYG+A EE+K W+ + EY+ R SL+ + +L+D + +K D ++I
Sbjct: 61 ADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMI 120
Query: 126 SLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL 185
S V+LTK D + + + E++ A N V V SS G+ L
Sbjct: 121 EWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDV-QVETFSSLKKQGVDKL 179
Query: 186 RTVLS 190
R L
Sbjct: 180 RQKLD 184
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 72.4 bits (176), Expect = 1e-16
Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 15/183 (8%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I FAGRSNVGKS+++ LT + VR +PG+T+ I + +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKK--VRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLP 60
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLI------------DTKWGVKPRDHELISLMERS 131
+EV++ ++ + ++ V +L+ K G P D E +
Sbjct: 61 KEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLREL 120
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
V + K D + + + + + + + + + +S+K G I L+ + +
Sbjct: 121 DIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSE-IDKVFIPISAKFGDNIERLKNRIFE 179
Query: 192 IAR 194
+ R
Sbjct: 180 VIR 182
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 69.7 bits (169), Expect = 1e-15
Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 18/180 (10%)
Query: 21 LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN----FFKLGTKLCLVDLPG 76
+ ++ G N GKSS+L A+TR + + P T + N + L D+PG
Sbjct: 1 IADVGLVGYPNAGKSSLLAAMTRAH--PKIAPYPFTTLSPNLGVVEVSEEERFTLADIPG 58
Query: 77 YGFAYAKEE--VKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTK 134
++ + + + + V V L + K +L+ R
Sbjct: 59 IIEGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLV 118
Query: 135 YQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
K D + ++ A V+ VS+ +GAG+ +L+ L + R
Sbjct: 119 AL---NKVDLLEE-------EAVKALADALAREGLAVLPVSALTGAGLPALKEALHALVR 168
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 66.9 bits (162), Expect = 9e-15
Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 20/180 (11%)
Query: 21 LPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTIN----FFKLGTKLCLVDLPG 76
L ++ G +VGKS++L+ ++ + +D T N G + DLP
Sbjct: 1 LADVGLVGFPSVGKSTLLSVVSSAK--PKIADYHFTTLVPNLGMVETDDGRSFVMADLP- 57
Query: 77 YGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLID-----TKWGVKPRDHELISLMERS 131
G + + ++ TRV + + + + + +
Sbjct: 58 -GLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLT 116
Query: 132 QTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+ +V K D A + E+ K + PV +S+ + G+R L ++
Sbjct: 117 ERPQIIVANKMDMP-------EAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVAN 169
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 68.6 bits (167), Expect = 2e-14
Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 30/189 (15%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTI-----NFFKLGTKLCLVDLPGYG 78
+A G + GKSS +N L + K G+ + + DLPG G
Sbjct: 59 VAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIG 118
Query: 79 FAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVV 138
+ Y+ + +I + K D ++ + + ++ V
Sbjct: 119 STNFPPD----------TYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFV 168
Query: 139 LTKTDTVFPIDVARRA-------------MQIEESLKANNSLVQPVMMVSSK--SGAGIR 183
TK D+ + + + + N P+ ++S+K
Sbjct: 169 RTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYDFP 228
Query: 184 SLRTVLSKI 192
L L
Sbjct: 229 VLMDKLISD 237
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 60.5 bits (145), Expect = 2e-12
Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 7/168 (4%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
IA GR NVGKS++LN L Q + TS K T+ +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQK-ISITSRKAQTTRHRIVGIHTEGAYQ-AIYVDTPGLHM 65
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
EE + + K S+ ++ V +++ + L L E V +
Sbjct: 66 EEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDN 125
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
D+ + + ++ +S+++G + ++ ++ K
Sbjct: 126 VQEKADLLPHLQFLASQMN-----FLDIVPISAETGLNVDTIAAIVRK 168
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 60.1 bits (144), Expect = 3e-12
Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 8/180 (4%)
Query: 19 PDLPE---IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL---GTKLCLV 72
P++ + +A GR NVGKS++ NA+ + S PG T+ ++ G K V
Sbjct: 3 PEITDAIKVAIVGRPNVGKSTLFNAILNKE-RALVSPIPGTTRDPVDDEVFIDGRKYVFV 61
Query: 73 DLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQ 132
D G E + S V +++D G+ +D + LMER
Sbjct: 62 DTAGLRRKSRVEPRTVEKYSNYRVVDSIE-KADVVVIVLDATQGITRQDQRMAGLMERRG 120
Query: 133 TKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKI 192
VV K D V + K P++ S+ G I + ++
Sbjct: 121 RASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLA 180
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 56.9 bits (136), Expect = 3e-11
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 18/171 (10%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL---GTKLCLVDLPGYGFA 80
+ G+ NVGKS++LN L + +D PG T+ + ++ G +VD G
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNE-DRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGV--- 58
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
+ E D E L E T +++ +++ P D E ++ER + K +V+
Sbjct: 59 --RSETNDLVERLGIE--RTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVI 114
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
V +I+ L + + ++ +S+ G G+ L + +
Sbjct: 115 NKVDVVE---KINEEEIKNKLGTD----RHMVKISALKGEGLEKLEESIYR 158
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 55.1 bits (131), Expect = 2e-10
Identities = 26/168 (15%), Positives = 57/168 (33%), Gaps = 9/168 (5%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ GR NVGKS++ N L ++ D+ G+T+ + L +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKK-KAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDN 61
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + + R + V ++D K G+ D L + +S +V K +
Sbjct: 62 PQDIISQKMKEVTLNMIREA-DLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAE 120
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+ + + + VS++ + ++ + K
Sbjct: 121 NLREFEREVKPELYSLGFG-------EPIPVSAEHNINLDTMLETIIK 161
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 51.7 bits (122), Expect = 3e-09
Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 12/168 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ AGR N GKSS+LNAL + + + I + + G
Sbjct: 4 VVIAGRPNAGKSSLLNALAGR--------EAAIVTDIAGTTRDVLREHIHIDGMPLHIID 55
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ V+ R + + D ++ ++ + +
Sbjct: 56 TAGLREASDEVERIGIERAWQEIEQ----ADRVLFMVDGTTTDAVDPAEIWPEFIARLPA 111
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+ V +A E+L + ++ +S+++G G+ LR L +
Sbjct: 112 KLPITVVRNKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQ 159
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 51.7 bits (122), Expect = 3e-09
Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 8/168 (4%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+A G+ NVGKS++LN L V S +P T+ L + +
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVK-VAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKP 66
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + + V+ + + + + +V K D
Sbjct: 67 MDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLD 126
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+ A +A M+S+ + L+ L
Sbjct: 127 AAKYPEEAMKAYH-------ELLPEAEPRMLSALDERQVAELKADLLA 167
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 46.9 bits (110), Expect = 3e-07
Identities = 24/182 (13%), Positives = 45/182 (24%), Gaps = 16/182 (8%)
Query: 22 PEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAY 81
P I AG N GK+S+L LT S +P + V L +
Sbjct: 4 PSIIIAGPQNSGKTSLLTLLTTD------SVRPTVVSQEPLSAADYDGSGVTLVDFPGHV 57
Query: 82 AKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKW-----GVKPRDHELISLMERSQTKYQ 136
+ L + + V +D K + +
Sbjct: 58 KLR--YKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDIL 115
Query: 137 VVLTKTDTVFPIDVARRAMQIE---ESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
+ K++ ++ +E + + + + VL
Sbjct: 116 IACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVLQSTD 175
Query: 194 RF 195
F
Sbjct: 176 GF 177
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 45.8 bits (107), Expect = 7e-07
Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 45/215 (20%)
Query: 22 PEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAY 81
P ++ G + GK+++L+ + R + G+TQ I ++ + + +
Sbjct: 6 PIVSVLGHVDHGKTTLLDHIRGSAVASR--EAGGITQHIGATEIPMDVIEGICGDFLKKF 63
Query: 82 AKEEVK--------DAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT 133
+ E E L++D G KP+ E ++++ +T
Sbjct: 64 SIRETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRT 123
Query: 134 KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQ------------------------ 169
+ V K D + E+ + VQ
Sbjct: 124 PFVVAANKIDRIHG-WRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERF 182
Query: 170 ----------PVMMVSSKSGAGIRSLRTVLSKIAR 194
++ +S+ +G GI L T+L +A+
Sbjct: 183 DRVTDFASQVSIIPISAITGEGIPELLTMLMGLAQ 217
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 41.5 bits (96), Expect = 1e-05
Identities = 16/175 (9%), Positives = 51/175 (29%), Gaps = 15/175 (8%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G N GK+++L + V + + I + + +
Sbjct: 18 VIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWN 77
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ V + + + +++++ + + + K D
Sbjct: 78 TYYTNTE----------FVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQD 127
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARFAKV 198
+ VA + ++ + ++ + + +G G+ L + K+
Sbjct: 128 VKECMTVAEISQFLKLTSIKDHQW--HIQACCALTGEGL---CQGLEWMMSRLKI 177
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 42.1 bits (98), Expect = 2e-05
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
G NVGKS+++N L ++ + +T D+PG+T + + K+G +L L+D PG + +
Sbjct: 115 ALIIGIPNVGKSTLINRLAKKN-IAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 173
Query: 84 EE 85
+E
Sbjct: 174 DE 175
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 41.0 bits (95), Expect = 2e-05
Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 12/175 (6%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G S VGKS++L+ TR + + G+ ++ K + +
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA---GQ 63
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
E + Y +L + + R + + S +V K+D
Sbjct: 64 ERYRRITSA---YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 120
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKIARFAK 197
RA+ +E+ + S+ + + +L++I R
Sbjct: 121 LRHL-----RAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVS 170
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 40.4 bits (93), Expect = 3e-05
Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 13/170 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G GK+++L L G + T+ + D+ G
Sbjct: 3 ILMVGLDAAGKTTILYKLKL--GEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ------ 54
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
D L + Y L V D + + R+ + L E +++
Sbjct: 55 ----DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANK 110
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR-SLRTVLSKI 192
P + + + L + + + SG G+ L + +++
Sbjct: 111 QDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 40.1 bits (92), Expect = 4e-05
Identities = 22/168 (13%), Positives = 42/168 (25%), Gaps = 12/168 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G GK+++L L VV T G +K +L +
Sbjct: 8 ILILGLDGAGKTTILYRLQVGE-VVTTIPTIGFNVETVTYK--------NLKFQVWDLGG 58
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + + C ++ E + V K D
Sbjct: 59 LTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSEL-VAMLEEEELRKAILVVFANKQD 117
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+ + A + + + S+ G G+ L +
Sbjct: 118 MEQAMTSSEMANSLGLPALKDRKW--QIFKTSATKGTGLDEAMEWLVE 163
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 40.6 bits (94), Expect = 4e-05
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 6/151 (3%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G+ VGKSS +N++ + VV S +++
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGE-RVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEG 93
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ-----VV 138
+ D ++K ++ + + + + V D + + S K V
Sbjct: 94 GYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVA 153
Query: 139 LTKTDTVFPIDVARRAMQIEESLKANNSLVQ 169
LT P + + S +
Sbjct: 154 LTHAQFSPPDGLPYDEFFSKRSEALLQVVRS 184
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 39.6 bits (91), Expect = 6e-05
Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 13/170 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G N GK+++L L + T TQ N + ++ +++ G
Sbjct: 19 ILLLGLDNAGKTTLLKQLASEDISHITP-----TQGFNIKSVQSQGFKLNVWDIGGQRKI 73
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
++ E + S R + + + E + S + K D
Sbjct: 74 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEE-----KLSCVPVLIFANKQD 128
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR-SLRTVLSKI 192
+ + A + + + S+ +G G++ + V +
Sbjct: 129 LLTAAPASEIAEGLNLHTIRDRVW--QIQSCSALTGEGVQDGMNWVCKNV 176
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 38.9 bits (89), Expect = 9e-05
Identities = 18/172 (10%), Positives = 40/172 (23%), Gaps = 8/172 (4%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ F G N GK+++L+ L T +L G
Sbjct: 3 LLFLGLDNAGKTTLLHMLKND-----RLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQA 57
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + V V + + + + ++
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 117
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARF 195
+ + A + S + V M S G ++++
Sbjct: 118 SEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGY---LEAFQWLSQY 166
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 38.7 bits (89), Expect = 1e-04
Identities = 30/173 (17%), Positives = 53/173 (30%), Gaps = 18/173 (10%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKL---GTKLCLVDLPGYGFA 80
I G S VGKSS+L T + G+ + + KL + D G
Sbjct: 10 ILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG---- 65
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
++ + L Y + V + VK + ++ +L
Sbjct: 66 ------QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 119
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKI 192
R + E LK + S+K+ G++ ++ KI
Sbjct: 120 GNKIDKE----NREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 168
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 38.1 bits (87), Expect = 2e-04
Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 14/174 (8%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G GK++ +N + + ++ T N K+ + L G
Sbjct: 5 LTLVGLQYSGKTTFVNVIASG----QFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRF 60
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + + V V + + + D + V+ K D
Sbjct: 61 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKP-----QLQGIPVLVLGNKRD 115
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIARFAK 197
P + + + + +L A +S K I L + + +K
Sbjct: 116 --LPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDIT---LQWLIQHSK 164
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 36.9 bits (84), Expect = 7e-04
Identities = 18/143 (12%), Positives = 39/143 (27%), Gaps = 13/143 (9%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ F G + GK+ + L + +T + +K+ +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTG---QYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHES 59
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQ-----VV 138
+ + S+ ++ V + VK L ++ S +
Sbjct: 60 LRFQLLD-----RFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIA 114
Query: 139 LTKTDTVFPIDVARRAMQIEESL 161
K D Q+E+ L
Sbjct: 115 CNKQDIAMAKSAKLIQQQLEKEL 137
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 36.5 bits (84), Expect = 8e-04
Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 33/162 (20%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDK---------------PGLTQTINFFKL--- 65
+ G + GK+++ ALT + + G+T +
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 65
Query: 66 GTKLCLVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELI 125
VD PG+ + +K ++ + L++ G P+ E I
Sbjct: 66 KRHYSHVDCPGH-------------ADYIKNMITGAAQMDGAILVVSAADGPMPQTREHI 112
Query: 126 SLMERSQTKYQV-VLTKTDTVFPIDVARRA-MQIEESLKANN 165
L + Y V + K D V ++ M++ + L
Sbjct: 113 LLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYE 154
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 36.7 bits (84), Expect = 0.001
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 20 DLPEIAFAGRSNVGKSSMLNALTRQ 44
DLP+I G + GKSS+L + +
Sbjct: 23 DLPQIVVVGSQSSGKSSVLENIVGR 47
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 36.0 bits (82), Expect = 0.001
Identities = 25/173 (14%), Positives = 46/173 (26%), Gaps = 18/173 (10%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGL---TQTINFFKLGTKLCLVDLPGYGFA 80
I G S+VGK+S L G+ +TI KL + D G
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAG---- 63
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
+E + Y + + I + + S QV+L
Sbjct: 64 --QERYRTITTAY---YRGAMGFI--LMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLV 116
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKI 192
+ + + + S+K ++ ++ I
Sbjct: 117 GNKCDMEDERVVSSERGRQLADHLGF---EFFEASAKDNINVKQTFERLVDVI 166
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 35.8 bits (81), Expect = 0.001
Identities = 19/168 (11%), Positives = 48/168 (28%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ F G N GK+++L+ L ++ + + + K
Sbjct: 16 LVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWK 75
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + + L +D+ + + I ++ + + + +
Sbjct: 76 NYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERL 135
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
+ + SLK N+ V M S G +++
Sbjct: 136 REMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQ 183
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 36.0 bits (82), Expect = 0.002
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 20 DLPEIAFAGRSNVGKSSMLNALTR 43
DLP+IA G + GKSS+L
Sbjct: 25 DLPQIAVVGGQSAGKSSVLENFVG 48
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 35.4 bits (80), Expect = 0.002
Identities = 21/175 (12%), Positives = 51/175 (29%), Gaps = 7/175 (4%)
Query: 20 DLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
++ ++ G S VGK+S+++ K + ++ V
Sbjct: 1 NILKVIILGDSGVGKTSLMHRYVN--DKYSQQYKATIGADFLTKEVTVDGDKVATMQVWD 58
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVL 139
+E + + + + + + + +T V+L
Sbjct: 59 TAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVIL 118
Query: 140 TKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
+E K+ + P+ + S+K+ + T +IAR
Sbjct: 119 GNKIDAEESKKIVSEKSAQELAKSLGDI--PLFLTSAKNAINV---DTAFEEIAR 168
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 35.1 bits (80), Expect = 0.002
Identities = 23/174 (13%), Positives = 52/174 (29%), Gaps = 18/174 (10%)
Query: 24 IAFAGRSNVGKSSMLNALTRQ---WGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFA 80
I G S VGKS +L + T +T++ KL + D G
Sbjct: 5 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAG---- 60
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
++ + + Y + +++ + + +
Sbjct: 61 ------QERFRTITTAYYR-----GAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQ 109
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
D+ R + ++ L P + S+K+ + + L+K+ +
Sbjct: 110 LLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 163
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 35.1 bits (80), Expect = 0.002
Identities = 24/179 (13%), Positives = 54/179 (30%), Gaps = 22/179 (12%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPG---LTQTINFFKLGTKLCLVDLPGYGFA 80
+ G S VGK+ +L + G +TI KL + D G
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG---- 64
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
+E + + + + I + + + ++ E + + ++
Sbjct: 65 --QERFRTITTAYYR---GAMGIM--LVYDITNEKSFDNIRNWIRNIEEHASADVEKMIL 117
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-----RTVLSKIAR 194
+R + E K M S+K+ + + R + +K+ +
Sbjct: 118 GNKCDVND---KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 173
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 34.6 bits (78), Expect = 0.003
Identities = 25/172 (14%), Positives = 55/172 (31%), Gaps = 13/172 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G N GK+++L + D T N L + +++ G
Sbjct: 5 LLMLGLDNAGKTTILKKFNGE-----DVDTISPTLGFNIKTLEHRGFKLNIWDVGG---- 55
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + + Y + L V D + + L+E +++
Sbjct: 56 ---QKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANK 112
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIR-SLRTVLSKIAR 194
P ++ A+Q L + S + S+ +G + + +L I+
Sbjct: 113 QDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISS 164
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 34.5 bits (78), Expect = 0.005
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 23 EIAFAGRSNVGKSSMLNALTR 43
EI G+ NVGKS+ +A T
Sbjct: 2 EIGVVGKPNVGKSTFFSAATL 22
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 34.3 bits (77), Expect = 0.005
Identities = 30/171 (17%), Positives = 66/171 (38%), Gaps = 7/171 (4%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G + GK+++ LT DK +Q + L Y
Sbjct: 8 LGIFGHIDHGKTTLSKVLTEIAS-TSAHDKLPESQ-KRGITIDIGFSAFKLENYRITLVD 65
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
V +++D K G K + E + +++ VV+TK+D
Sbjct: 66 APGHADLIRAVVSAADII---DLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSD 122
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQ-PVMMVSSKSGAGIRSLR-TVLSKI 192
++ R M ++ L++ ++L ++ +S+K+G G+ L+ +++ +
Sbjct: 123 NAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTL 173
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 34.1 bits (77), Expect = 0.005
Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 22/177 (12%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTK---LCLVDLPGYGFA 80
G + GKS +L+ + ++ G+ +G K L + D G
Sbjct: 8 FLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAG---- 63
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
+E + Y +L + I ++ + L + ++L
Sbjct: 64 --QERFRSVTRSY---YRGAAGAL--LVYDITSRETYNALTNWLTDARMLASQNIVIILC 116
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-----RTVLSKI 192
D ++ + N + S+ +G + R +L+KI
Sbjct: 117 GNKKDLDADREVTFLEASRFAQENEL---MFLETSALTGENVEEAFVQCARKILNKI 170
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 34.2 bits (77), Expect = 0.005
Identities = 25/171 (14%), Positives = 50/171 (29%), Gaps = 12/171 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G GK+++L L V T N L K +++ G +
Sbjct: 20 ILILGLDGAGKTTILYRLQIGEVVTTKP-----TIGFNVETLSYKNLKLNVWDLGGQTSI 74
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + S + + +K H ++ E V K D
Sbjct: 75 RPYWRCYYADTAAVIFVVDSTDKDRMSTASKE-----LHLMLQEEELQDAALLVFANKQD 129
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
+ + + ++ + S ++ S+ G GI L + +
Sbjct: 130 QPGALSASEVSKELNLVELKDRSW--SIVASSAIKGEGITEGLDWLIDVIK 178
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 33.6 bits (76), Expect = 0.006
Identities = 27/178 (15%), Positives = 55/178 (30%), Gaps = 18/178 (10%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPG---LTQTINFFKLGTKLCLVDLPGYGFA 80
I G + VGK+ ++ T+ G + +T+ KL + D G
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAG---- 63
Query: 81 YAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLT 140
+E + + Y S + I + + L + + + K VL
Sbjct: 64 --QERFRSITQ---SYYRSANALILTYD--ITCEESFRCLPEWLREIEQYASNKVITVLV 116
Query: 141 KTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKIARFAK 197
+ EE +A + + S+K + L + ++ A+
Sbjct: 117 GNKIDLAERREVSQQRAEEFSEAQDM---YYLETSAKESDNVEKLFLDLACRLISEAR 171
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 33.8 bits (76), Expect = 0.006
Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 19/187 (10%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSD-KPGLTQTINFFKLGTKLCLVDLPGYGFAYA 82
I G + GK+++ ALT W + + + G+T I F + C + Y +
Sbjct: 8 IGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCP-NCGRYSTSPV 66
Query: 83 KEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQT--------- 133
E + + + + + + +I+ E
Sbjct: 67 CPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMA 126
Query: 134 -------KYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLR 186
+ K + V QI+E ++ + P++ +S+ GA I L
Sbjct: 127 LQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLV 186
Query: 187 -TVLSKI 192
+ I
Sbjct: 187 KAIEDFI 193
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 33.1 bits (74), Expect = 0.010
Identities = 19/170 (11%), Positives = 45/170 (26%), Gaps = 9/170 (5%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G SNVGK+ + RT G+ + + + L
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDT------ 58
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + +V+ Y ++ V + + +L
Sbjct: 59 AGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNK 118
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
+ ++ ++ P+ S+K+ + + +A
Sbjct: 119 CDLRSAIQVPTDLAQKFADTHSM---PLFETSAKNPNDNDHVEAIFMTLA 165
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 32.9 bits (74), Expect = 0.011
Identities = 25/176 (14%), Positives = 53/176 (30%), Gaps = 19/176 (10%)
Query: 24 IAFAGRSNVGKSSMLNALTR----QWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
+ G S VGK+ +L + T + ++ + KL + D G
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG--- 65
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVL 139
+E + ++ + + K L + E +Q ++L
Sbjct: 66 ---QERFRSVTHAYYRD-----AHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALML 117
Query: 140 TKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKIAR 194
+ + E+ K P M S+K+G + + ++ R
Sbjct: 118 LGNKVDSAHERVVKREDGEKLAKEYGL---PFMETSAKTGLNVDLAFTAIAKELKR 170
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 33.3 bits (75), Expect = 0.012
Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Query: 24 IAFAGRSNVGKSSMLNALTRQ---WGVVRTSDKPGLTQTINFFKLGTKLCLVDLPG 76
+ G S VGKS +L + + T +T+ KL + D G
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAG 64
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 32.9 bits (74), Expect = 0.020
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 23 EIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLT 57
+ G NVGKS+ A+T+ + ++ P T
Sbjct: 12 KTGIVGMPNVGKSTFFRAITKS-VLGNPANYPYAT 45
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 32.3 bits (72), Expect = 0.024
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 30/118 (25%)
Query: 101 RVSLKRVCLLIDTKWGVKPRD-----HELISLMERSQTKYQVVLTKTDTVFPIDVARRAM 155
+ V + D + KP D + + R L K D + + R
Sbjct: 121 NLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSE-EEKERHR 179
Query: 156 QIEESLKANNSLVQ------------------------PVMMVSSKSGAGIRSLRTVL 189
+ E + + ++ V+ +S+K+ G L T+
Sbjct: 180 KYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLETLA 237
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 31.8 bits (71), Expect = 0.026
Identities = 20/170 (11%), Positives = 46/170 (27%), Gaps = 12/170 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
G VGKS +L+ T + + G+ ++ + + + +
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA---GQ 63
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
E + Y +L + I + L + ++L
Sbjct: 64 ERFRAVTRSY---YRGAAGAL--MVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNK 118
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKI 192
+ ++ + N + S+K+G + KI
Sbjct: 119 ADLEAQRDVTYEEAKQFAEENGL---LFLEASAKTGENVEDAFLEAAKKI 165
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 32.4 bits (73), Expect = 0.026
Identities = 21/161 (13%), Positives = 55/161 (34%), Gaps = 21/161 (13%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVV--------RTSD------KPGLTQTINFFKLGTKL 69
++ + GKS++ ++L ++ G++ R +D + G+T L +++
Sbjct: 20 MSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEM 79
Query: 70 CLVDLPGYGFAYAKEEVKDAW------EELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
D+ + E + +++DT GV +
Sbjct: 80 SDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTET 139
Query: 124 LISLMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKAN 164
++ + K VV+ K D +++ + ++
Sbjct: 140 VLRQALGERIKPVVVINKVDRAL-LELQVSKEDLYQTFART 179
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 32.0 bits (72), Expect = 0.028
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Query: 25 AFAGRSNVGKSSMLNALTRQWGVVRTSD-------KPGLTQTINFFKLGTKLCLVDLPGY 77
AG S VGKSS+LNA+ +R S+ T T K +VD PG+
Sbjct: 99 TMAGLSGVGKSSLLNAINPGL-KLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYVVDTPGF 157
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 31.8 bits (71), Expect = 0.028
Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 23/184 (12%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G + GK++++ A+T W + S++ TI T + + + AY
Sbjct: 11 IGVVGHVDHGKTTLVQAITGIWT-SKHSEELKRGMTIKLGYAETNIGVCESCKKPEAYVT 69
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKW----GVKPRDHELIS------------- 126
E + + R+S G D ++
Sbjct: 70 EPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTR 129
Query: 127 -----LMERSQTKYQVVLTKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAG 181
L +V K D V + + QI++ K + P++ VS+
Sbjct: 130 EHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKIN 189
Query: 182 IRSL 185
I SL
Sbjct: 190 IDSL 193
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 31.5 bits (70), Expect = 0.043
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 21 LPEIAFAGRSNVGKSSMLNALTRQW 45
+P +AFA S GK+++L L
Sbjct: 2 IPLLAFAAWSGTGKTTLLKKLIPAL 26
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 31.0 bits (69), Expect = 0.045
Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 16/172 (9%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G VGKS++ + + + L L G
Sbjct: 6 VVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQ-- 63
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTK--WGVKPRDHELISLMERSQTKYQVVLTK 141
+ + Y+ V L++ + +KP ++I + + +V K
Sbjct: 64 ------FASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNK 117
Query: 142 TDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKI 192
D + + E P M S+KS + L ++ ++
Sbjct: 118 VDLESERE-----VSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 31.2 bits (69), Expect = 0.053
Identities = 23/171 (13%), Positives = 46/171 (26%), Gaps = 7/171 (4%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G S VGK+S++N + + G + +L + +
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 64
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + A+ V W + S + + V+ K D
Sbjct: 65 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ--ASPRDPENFPFVVLGNKID 122
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
+RA S P S+K + +++ A
Sbjct: 123 LENRQVATKRAQAWCYSKNN-----IPYFETSAKEAINVEQAFQTIARNAL 168
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 30.7 bits (68), Expect = 0.071
Identities = 25/173 (14%), Positives = 46/173 (26%), Gaps = 14/173 (8%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G VGKSS++N L TI L L + +
Sbjct: 9 VILLGDGGVGKSSLMNRYVTN------KFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 62
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ Y + L + + + +
Sbjct: 63 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 122
Query: 144 TVFPIDVARRAMQIEESLK-ANNSLVQPVMMVSSKSGAGIRSL-----RTVLS 190
ID++ R + EE+ ++ P S+K + + R VL+
Sbjct: 123 --NKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 173
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 30.7 bits (69), Expect = 0.082
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 24 IAFAGRSNVGKSSMLNALTRQ 44
G NVGKS++ NALT+
Sbjct: 5 CGIVGLPNVGKSTLFNALTKA 25
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 30.3 bits (67), Expect = 0.087
Identities = 28/174 (16%), Positives = 48/174 (27%), Gaps = 21/174 (12%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G VGKS++ L + V + G L L G
Sbjct: 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYS 65
Query: 84 EEVKDAWEELVKEYVSTRV----SLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVL 139
+ S + + + VK D + L V
Sbjct: 66 AMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVL----------VG 115
Query: 140 TKTDTVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKI 192
K D +R+A + S P + S+K+ G+ T++ +I
Sbjct: 116 NKCDLAARTVESRQAQDLARSYGI------PYIETSAKTRQGVEDAFYTLVREI 163
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 30.5 bits (68), Expect = 0.089
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 24 IAFAGRSNVGKSSMLNALTRQW----GVVRTSDKPGLTQTINFFKLGTKL-CLVDLPGYG 78
FAG+S VGKSS+LNA++ + + G T + + T + D PG+
Sbjct: 100 TVFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGLVADTPGFS 159
Query: 79 FA----YAKEEVKDAWEEL 93
+EE+ + ++
Sbjct: 160 SLEFTDIEEEELGYTFPDI 178
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 30.0 bits (66), Expect = 0.12
Identities = 26/181 (14%), Positives = 52/181 (28%), Gaps = 20/181 (11%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
G VGK+ +L + T + N G + L + A
Sbjct: 8 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGL-----WDTAG 62
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+E D L + + + V+ + + + T +V TK D
Sbjct: 63 QEDYDRLRPLSYPQTD-VSLICFSLVSPASFENVRAKWYPEVR-HHCPNTPIILVGTKLD 120
Query: 144 TVFPIDVARRAMQIEESLK--------ANNSLVQPVMMVSSKSGAGIRSL-----RTVLS 190
D + + + + A + S+ + G++++ R VL
Sbjct: 121 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 180
Query: 191 K 191
Sbjct: 181 P 181
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 29.6 bits (65), Expect = 0.14
Identities = 22/170 (12%), Positives = 41/170 (24%), Gaps = 9/170 (5%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G + VGKSS++ G +
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVT---INEHTVKFEIWDTAGQ 62
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
E + + V + H + L E++ + L
Sbjct: 63 ERFASLAPMYYRNAQAA-----LVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNK 117
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKI 192
+ R + EE K S+K+G + + + KI
Sbjct: 118 IDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 29.7 bits (65), Expect = 0.15
Identities = 21/170 (12%), Positives = 50/170 (29%), Gaps = 13/170 (7%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G VGKS++ D P + + + + G +
Sbjct: 4 VLLLGAPGVGKSALARIFGGV------EDGPEAEAAGHTYD-----RSIVVDGEEASLMV 52
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
++ + + V + T G + EL + R++ V +
Sbjct: 53 YDIWEQDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVG 112
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKI 192
+ R + ++E + S+ +++L V+ +I
Sbjct: 113 NKSDLV-RSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQI 161
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 29.8 bits (67), Expect = 0.16
Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 6/105 (5%)
Query: 24 IAFAGRSNVGKSSMLNALTRQW----GVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
IAFAG S GKS++ + L R + G + +P I+ +++ V
Sbjct: 31 IAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQP--IDNISLENWRSQIGFVSQDSAIM 88
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHEL 124
A E E L + + E+
Sbjct: 89 AGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEV 133
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 29.7 bits (65), Expect = 0.17
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+ G VGKSSM+ +
Sbjct: 5 MVVVGNGAVGKSSMIQRYCK 24
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 29.5 bits (65), Expect = 0.18
Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 9/176 (5%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G S VGK++ L T + + K T I+F + G K
Sbjct: 8 LLALGDSGVGKTTFLYRYTDN----KFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 63
Query: 84 EEVKDAWEELVKEYVSTRVSLKR--VCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTK 141
++ + + S + R + L+ + + + M + Q
Sbjct: 64 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 123
Query: 142 TDTV--FPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKIAR 194
+ +R + ++ + + P S+ +G + T+L I +
Sbjct: 124 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 179
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 29.2 bits (64), Expect = 0.19
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 20 DLPE--IAFAGRSNVGKSSMLNALTR 43
+LP + G VGKS++ +
Sbjct: 1 NLPTYKLVVVGDGGVGKSALTIQFFQ 26
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 29.3 bits (64), Expect = 0.19
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+ G VGKS++ N
Sbjct: 6 VVLIGEQGVGKSTLANIFAG 25
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 29.5 bits (65), Expect = 0.20
Identities = 20/161 (12%), Positives = 41/161 (25%), Gaps = 16/161 (9%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
I G GK+++L L V +T+ + + + V +
Sbjct: 15 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWR 74
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + R + + + +I + Q
Sbjct: 75 HYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD------- 127
Query: 144 TVFPIDVARRAMQIEESLKANN--SLVQPVMMVSSKSGAGI 182
A + +I+E L V + SG G+
Sbjct: 128 -------AMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGL 161
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 28.7 bits (64), Expect = 0.35
Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 24 IAFAGRSNVGKSSMLNALTRQW----GVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGF 79
+A G + GK+S+L + + G+++ S + ++ GT + + +G
Sbjct: 65 LAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGT---IKENIIFGV 121
Query: 80 AYAKEEVKDAWEE 92
+Y + K +
Sbjct: 122 SYDEYRYKSVVKA 134
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 28.8 bits (63), Expect = 0.37
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Query: 24 IAFAGRSNVGKSSMLNALTR--QWGVVRT 50
I G GK+ + LTR + V T
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLNFIGVPT 33
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 28.5 bits (62), Expect = 0.42
Identities = 22/175 (12%), Positives = 44/175 (25%), Gaps = 12/175 (6%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G VGKS++ + + V + T G L L G
Sbjct: 9 LVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFG 68
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ L + V +++ + +R +V K D
Sbjct: 69 AMREQYM------RAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKAD 122
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKIARFAK 197
V R S S+K + ++ + ++ +
Sbjct: 123 LESQRQVPRSEASAF-----GASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQE 172
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 28.2 bits (61), Expect = 0.49
Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 12/172 (6%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
IA G +VGKSS+ + + TKL V+ Y
Sbjct: 7 IAILGYRSVGKSSLTIQFVE--------GQFVDSYDPTIENTFTKLITVNGQEYHLQLVD 58
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+D + + Y V + K + L + + ++L
Sbjct: 59 TAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNK 118
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-RTVLSKIAR 194
++ + + ++ N+ + S+K + R ++ + +
Sbjct: 119 KDLHMERVISYEEGKALAESWNA---AFLESSAKENQTAVDVFRRIILEAEK 167
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.9 bits (61), Expect = 0.59
Identities = 23/176 (13%), Positives = 51/176 (28%), Gaps = 16/176 (9%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
G + VGKS +L T + + G ++ +D
Sbjct: 6 YIIIGDTGVGKSCLLLQFT-------DKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 58
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
++++ + + Y V + + L + S + ++L
Sbjct: 59 TAGQESFRSITRSYYRGAAGALLVYDITRRET-FNHLTSWLEDARQHSSSNMVIMLIGNK 117
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSL-----RTVLSKIAR 194
+ RR ++ EE M S+K+ + + + KI +
Sbjct: 118 SDLES---RRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 170
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.7 bits (60), Expect = 0.65
Identities = 14/168 (8%), Positives = 38/168 (22%), Gaps = 14/168 (8%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G GK++ + K T + L + + A
Sbjct: 6 LVLVGDGGTGKTTFVKRHLTG----EFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 61
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+E + +++ + + + + +
Sbjct: 62 QEKFGGLRDGYYIQAQC-------AIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG 114
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
I + + + N +S+KS L++
Sbjct: 115 NKVDIKDRKVKAKSIVFHRKKNL---QYYDISAKSNYNFEKPFLWLAR 159
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.7 bits (60), Expect = 0.70
Identities = 20/168 (11%), Positives = 43/168 (25%), Gaps = 11/168 (6%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G S VGKSS++ + G L ++ +
Sbjct: 9 LVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA---GQ 65
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
E + + + ++ K EL + L+
Sbjct: 66 ERYHSLAPMYYRG--AQAAIVVYDITNEESFARAKNWVKELQRQASP---NIVIALSGNK 120
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSK 191
A + + N+ M S+K+ + + ++K
Sbjct: 121 ADLANKRAVDFQEAQSYADDNS---LLFMETSAKTSMNVNEIFMAIAK 165
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.6 bits (60), Expect = 0.72
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+A G VGKSS++ +
Sbjct: 5 VAVFGAGGVGKSSLVLRFVK 24
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 27.6 bits (60), Expect = 0.78
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 24 IAFAGRSNVGKSSMLNALTRQ 44
+ F G +VGK+S++
Sbjct: 3 LVFLGEQSVGKTSLITRFMYD 23
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 0.79
Identities = 21/171 (12%), Positives = 50/171 (29%), Gaps = 1/171 (0%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G GK+ +L ++ + G ++ L G
Sbjct: 5 LVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYD 64
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
++ + + + I KW + + + K + +
Sbjct: 65 RLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHT 124
Query: 144 TVFPIDVARRAMQIEESLK-ANNSLVQPVMMVSSKSGAGIRSLRTVLSKIA 193
+ + ++ EE AN M S+K+ G+R + + ++ A
Sbjct: 125 RRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 175
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 27.7 bits (60), Expect = 0.81
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 24 IAFAGRSNVGKSSMLNALTRQ 44
+ G + VGKSS++
Sbjct: 7 VCLLGDTGVGKSSIMWRFVED 27
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 27.5 bits (60), Expect = 0.84
Identities = 3/22 (13%), Positives = 8/22 (36%)
Query: 24 IAFAGRSNVGKSSMLNALTRQW 45
G + GK++++
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAAA 25
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.3 bits (59), Expect = 0.86
Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 11/171 (6%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFFKLGTKLCLVDLPGYGFAYAK 83
+ G VGKS++ + + V + T L L G
Sbjct: 8 LVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFG 67
Query: 84 EEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTD 143
+ + V+ + K+ +++ + +R + ++ K D
Sbjct: 68 AMREQYMRTGEGFLLVFSVTDRGSF-EEIYKF-----QRQILRVKDRDEFPMILIGNKAD 121
Query: 144 TVFPIDVARRAMQIEESLKANNSLVQPVMMVSSKSGAGIRSLRTVLSKIAR 194
+R + EE + L M S+K + L ++ R
Sbjct: 122 -----LDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIR 167
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 27.3 bits (59), Expect = 0.91
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 14 SSFPAPDLPEIAFAGRSNVGKSSMLNALTR 43
+ P + + G VGK+ +L +
Sbjct: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYAN 31
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 27.3 bits (59), Expect = 1.1
Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 21 LPE--IAFAGRSNVGKSSMLNALTRQ 44
+PE + G + GKSS+++
Sbjct: 3 IPELRLGVLGDARSGKSSLIHRFLTG 28
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 27.2 bits (59), Expect = 1.2
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+ G VGKS++
Sbjct: 7 VIMVGSGGVGKSALTLQFMY 26
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.0 bits (58), Expect = 1.3
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWG 46
+A G + GKS ++N L +
Sbjct: 10 VAILGGESSGKSVLVNKLAAVFN 32
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 26.9 bits (58), Expect = 1.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+A GR+ VGKS+++
Sbjct: 5 LAIFGRAGVGKSALVVRFLT 24
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.9 bits (58), Expect = 1.4
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 24 IAFAGRSNVGKSSMLNALTRQ 44
I G S GK+++L+ +
Sbjct: 5 IVVVGDSQCGKTALLHVFAKD 25
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.4 bits (57), Expect = 1.6
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+ G VGK+S++
Sbjct: 6 VVLLGEGCVGKTSLVLRYCE 25
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 26.5 bits (57), Expect = 1.7
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
G VGK+ +L + T
Sbjct: 6 CVVVGDGAVGKTCLLISYTT 25
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.5 bits (57), Expect = 2.0
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+ G VGKS++ +
Sbjct: 6 LVVLGSGGVGKSALTVQFVQ 25
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC
transporter MsbA, C-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 253
Score = 26.7 bits (59), Expect = 2.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWGVVRTS 51
+A GRS GKS++ + +TR + +
Sbjct: 44 VALVGRSGSGKSTIASLITRFYDIDEGH 71
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 26.3 bits (58), Expect = 2.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+AF G S GKS+++N + R
Sbjct: 47 VAFVGMSGGGKSTLINLIPR 66
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 26.1 bits (56), Expect = 2.2
Identities = 5/22 (22%), Positives = 11/22 (50%)
Query: 24 IAFAGRSNVGKSSMLNALTRQW 45
I G VGK++++ + +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERL 24
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 26.4 bits (58), Expect = 2.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 24 IAFAGRSNVGKSSMLNALTRQW 45
I GRS GKS++ + R +
Sbjct: 32 IGIVGRSGSGKSTLTKLIQRFY 53
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 26.0 bits (57), Expect = 2.8
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 24 IAFAGRSNVGKSSMLNALTRQW 45
A G + GKS++ L +
Sbjct: 43 TALVGPNGSGKSTVAALLQNLY 64
>d1rrqa1 a.96.1.2 (A:9-229) Catalytic domain of MutY {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 221
Score = 26.1 bits (56), Expect = 2.8
Identities = 11/72 (15%), Positives = 23/72 (31%)
Query: 87 KDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISLMERSQTKYQVVLTKTDTVF 146
+D ++ V E + + ++ V + P L E K L V
Sbjct: 26 RDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVR 85
Query: 147 PIDVARRAMQIE 158
+ A + ++
Sbjct: 86 NLHAAVKEVKTR 97
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.0 bits (56), Expect = 3.1
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 24 IAFAGRSNVGKSSMLNALT 42
I G GKS+ L +
Sbjct: 5 ILLLGAGESGKSTFLKQMR 23
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.7 bits (55), Expect = 4.0
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 24 IAFAGRSNVGKSSMLNALTR 43
+ G GKS+ + +
Sbjct: 5 LLLLGTGESGKSTFIKQMRI 24
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 25.3 bits (54), Expect = 5.5
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 24 IAFAGRSNVGKSSMLNALT 42
+ G GKS+++ +
Sbjct: 5 LLLLGAGESGKSTIVKQMK 23
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 25.1 bits (54), Expect = 6.7
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 24 IAFAGRSNVGKSSMLNALT 42
+ G GKS+++ +
Sbjct: 9 LLLLGAGESGKSTIVKQMR 27
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G
{Human (Homo sapiens) [TaxId: 9606]}
Length = 193
Score = 24.8 bits (54), Expect = 7.0
Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 80 AYAKEEVKDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHELISL-----MERSQ 132
A ++EE++ + +++EY+ +K + + + +ERS
Sbjct: 3 ALSEEELEKKSKAIIEEYLHLN-DMKEAVQCVQ-ELASPSLLFIFVRHGVESTLERSA 58
>d1fsfa_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase
NagB {Escherichia coli [TaxId: 562]}
Length = 266
Score = 24.7 bits (53), Expect = 7.4
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 87 KDAWEELVKEYVSTRVSLKRVCLLIDTKWGVKPRDHE 123
++ LV+ + + +VS K V ++ P++H
Sbjct: 46 MTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHP 82
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 24.6 bits (52), Expect = 8.2
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 24 IAFAGRSNVGKSSMLNALTRQWG 46
I G S+ GKS ++ L
Sbjct: 6 IILNGGSSAGKSGIVRCLQSVLP 28
>d1vr8a1 d.312.1.1 (A:25-154) Hypothetical protein TM1622
{Thermotoga maritima [TaxId: 2336]}
Length = 130
Score = 24.0 bits (52), Expect = 9.3
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 77 YGFAYAKEEVKDAWEELVKEY 97
+ + Y EE K W++L
Sbjct: 50 FLYVYKGEEAKKIWKKLNGRA 70
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.132 0.374
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 662,767
Number of extensions: 28252
Number of successful extensions: 226
Number of sequences better than 10.0: 1
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 108
Length of query: 198
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 117
Effective length of database: 1,295,466
Effective search space: 151569522
Effective search space used: 151569522
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.7 bits)