Query 029159
Match_columns 198
No_of_seqs 236 out of 1798
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 08:26:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029159.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029159hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.8 8.8E-21 1.9E-25 172.3 6.8 63 130-197 3-65 (371)
2 KOG0713 Molecular chaperone (D 99.8 1.1E-19 2.3E-24 162.6 6.5 65 128-197 13-77 (336)
3 PRK14288 chaperone protein Dna 99.7 9.9E-18 2.1E-22 152.4 6.5 61 131-196 3-63 (369)
4 smart00271 DnaJ DnaJ molecular 99.7 9.9E-17 2.1E-21 108.8 7.4 58 132-193 2-59 (60)
5 PRK14296 chaperone protein Dna 99.7 3.5E-17 7.5E-22 149.0 6.6 60 131-196 4-63 (372)
6 PF00226 DnaJ: DnaJ domain; I 99.7 7.5E-17 1.6E-21 111.2 6.3 61 132-196 1-61 (64)
7 PRK14279 chaperone protein Dna 99.7 6.3E-17 1.4E-21 148.2 7.0 61 131-196 9-69 (392)
8 PRK14282 chaperone protein Dna 99.7 1.1E-16 2.3E-21 145.5 7.0 62 131-196 4-65 (369)
9 PRK14286 chaperone protein Dna 99.7 1.3E-16 2.9E-21 145.1 6.8 61 131-196 4-64 (372)
10 cd06257 DnaJ DnaJ domain or J- 99.7 4.1E-16 8.8E-21 103.9 7.1 55 132-191 1-55 (55)
11 KOG0712 Molecular chaperone (D 99.6 1.5E-16 3.2E-21 143.2 5.4 58 131-196 4-61 (337)
12 KOG0717 Molecular chaperone (D 99.6 2.7E-16 6E-21 145.4 7.0 66 127-196 4-69 (508)
13 PRK14285 chaperone protein Dna 99.6 3.6E-16 7.9E-21 142.0 7.0 61 131-196 3-63 (365)
14 PTZ00037 DnaJ_C chaperone prot 99.6 4.2E-16 9.2E-21 144.2 7.4 58 130-196 27-84 (421)
15 KOG0716 Molecular chaperone (D 99.6 4.3E-16 9.4E-21 136.1 6.9 62 130-196 30-91 (279)
16 PRK14295 chaperone protein Dna 99.6 4.5E-16 9.7E-21 142.5 6.8 61 131-196 9-69 (389)
17 PRK14277 chaperone protein Dna 99.6 4.6E-16 1E-20 142.1 6.7 61 131-196 5-65 (386)
18 PRK14287 chaperone protein Dna 99.6 5.5E-16 1.2E-20 141.1 6.9 60 131-196 4-63 (371)
19 PRK14299 chaperone protein Dna 99.6 6.4E-16 1.4E-20 136.4 6.7 60 131-196 4-63 (291)
20 PRK14294 chaperone protein Dna 99.6 7.7E-16 1.7E-20 139.7 6.9 61 131-196 4-64 (366)
21 PRK14283 chaperone protein Dna 99.6 6.1E-16 1.3E-20 140.9 6.2 60 131-196 5-64 (378)
22 PRK14297 chaperone protein Dna 99.6 8.2E-16 1.8E-20 140.2 7.1 61 131-196 4-64 (380)
23 PRK14301 chaperone protein Dna 99.6 9E-16 2E-20 139.7 7.1 61 131-196 4-64 (373)
24 PRK14284 chaperone protein Dna 99.6 8.2E-16 1.8E-20 140.7 6.6 61 131-196 1-61 (391)
25 PRK14290 chaperone protein Dna 99.6 9.8E-16 2.1E-20 139.0 6.9 62 131-196 3-64 (365)
26 PRK14298 chaperone protein Dna 99.6 9E-16 2E-20 140.0 6.6 60 131-196 5-64 (377)
27 PRK14276 chaperone protein Dna 99.6 9.2E-16 2E-20 139.9 6.3 60 131-196 4-63 (380)
28 PRK10767 chaperone protein Dna 99.6 1.2E-15 2.6E-20 138.5 7.0 61 131-196 4-64 (371)
29 PRK14291 chaperone protein Dna 99.6 9.2E-16 2E-20 140.0 6.2 60 131-196 3-62 (382)
30 PRK14278 chaperone protein Dna 99.6 9.3E-16 2E-20 139.9 6.1 60 131-196 3-62 (378)
31 KOG0691 Molecular chaperone (D 99.6 1.1E-15 2.4E-20 135.8 6.2 62 130-196 4-65 (296)
32 PRK14281 chaperone protein Dna 99.6 1.3E-15 2.7E-20 139.8 6.6 61 131-196 3-63 (397)
33 PRK14280 chaperone protein Dna 99.6 1.4E-15 3E-20 138.6 6.2 60 131-196 4-63 (376)
34 PRK10266 curved DNA-binding pr 99.6 4.2E-15 9E-20 132.0 6.3 60 131-196 4-63 (306)
35 PRK14292 chaperone protein Dna 99.6 5.3E-15 1.1E-19 134.3 6.9 61 130-196 1-61 (371)
36 KOG0715 Molecular chaperone (D 99.6 4.8E-15 1E-19 131.2 6.2 62 129-196 41-102 (288)
37 PRK14289 chaperone protein Dna 99.5 6E-15 1.3E-19 134.7 6.8 61 131-196 5-65 (386)
38 TIGR02349 DnaJ_bact chaperone 99.5 4.6E-15 1E-19 133.7 5.9 59 132-196 1-59 (354)
39 COG2214 CbpA DnaJ-class molecu 99.5 1.4E-14 2.9E-19 116.8 7.2 64 129-196 4-67 (237)
40 PRK14300 chaperone protein Dna 99.5 8.9E-15 1.9E-19 133.2 6.1 60 131-196 3-62 (372)
41 PRK14293 chaperone protein Dna 99.5 1.6E-14 3.5E-19 131.4 5.8 60 131-196 3-62 (374)
42 KOG0721 Molecular chaperone (D 99.5 3E-14 6.5E-19 121.4 5.9 61 131-196 99-159 (230)
43 KOG0718 Molecular chaperone (D 99.5 3.3E-14 7.2E-19 132.0 6.6 62 131-196 9-72 (546)
44 PTZ00341 Ring-infected erythro 99.5 3.7E-14 7.9E-19 140.9 7.3 63 128-196 570-632 (1136)
45 KOG0719 Molecular chaperone (D 99.5 4.7E-14 1E-18 121.4 5.6 65 128-196 11-76 (264)
46 PRK05014 hscB co-chaperone Hsc 99.5 1.4E-13 3E-18 113.6 7.2 63 132-196 2-68 (171)
47 PRK01356 hscB co-chaperone Hsc 99.4 2.7E-13 5.8E-18 111.5 6.9 64 131-196 2-67 (166)
48 PHA03102 Small T antigen; Revi 99.4 3.5E-13 7.5E-18 109.8 6.2 61 130-197 4-64 (153)
49 PRK00294 hscB co-chaperone Hsc 99.4 9.7E-13 2.1E-17 109.0 7.2 64 131-196 4-71 (173)
50 PRK03578 hscB co-chaperone Hsc 99.4 1.2E-12 2.7E-17 108.6 7.6 64 131-196 6-73 (176)
51 PRK09430 djlA Dna-J like membr 99.4 8.7E-13 1.9E-17 115.6 6.5 62 127-192 196-263 (267)
52 PTZ00100 DnaJ chaperone protei 99.4 2E-12 4.4E-17 100.9 7.1 55 127-190 61-115 (116)
53 TIGR03835 termin_org_DnaJ term 99.3 1.6E-12 3.4E-17 127.0 6.5 60 131-196 2-61 (871)
54 KOG0624 dsRNA-activated protei 99.3 3.5E-12 7.7E-17 116.0 5.4 64 130-197 393-458 (504)
55 KOG0714 Molecular chaperone (D 99.2 1.5E-11 3.2E-16 103.9 4.6 62 131-196 3-64 (306)
56 KOG0720 Molecular chaperone (D 99.2 2.1E-11 4.5E-16 113.2 5.0 63 128-196 232-294 (490)
57 KOG0722 Molecular chaperone (D 99.2 2.1E-11 4.4E-16 106.7 3.8 61 130-196 32-92 (329)
58 KOG1150 Predicted molecular ch 99.2 3.8E-11 8.2E-16 101.9 5.0 68 123-195 46-113 (250)
59 PRK01773 hscB co-chaperone Hsc 99.1 9.9E-11 2.2E-15 97.0 7.0 65 130-196 1-69 (173)
60 KOG0550 Molecular chaperone (D 99.1 3.9E-11 8.5E-16 110.7 4.9 63 130-196 372-434 (486)
61 PHA02624 large T antigen; Prov 99.0 3.3E-10 7.2E-15 109.1 6.4 60 130-196 10-69 (647)
62 COG5407 SEC63 Preprotein trans 99.0 4.2E-10 9.1E-15 104.8 4.1 62 131-196 98-163 (610)
63 TIGR00714 hscB Fe-S protein as 98.9 3.7E-09 7.9E-14 86.2 6.4 51 146-196 2-56 (157)
64 COG5269 ZUO1 Ribosome-associat 98.7 1.4E-08 3E-13 89.9 3.0 71 124-196 36-108 (379)
65 KOG1789 Endocytosis protein RM 98.6 1.2E-07 2.5E-12 95.8 7.0 65 125-193 1275-1339(2235)
66 KOG0568 Molecular chaperone (D 98.2 1.8E-06 3.8E-11 75.3 5.5 56 129-190 45-101 (342)
67 KOG0723 Molecular chaperone (D 98.2 4E-06 8.6E-11 64.7 5.9 56 128-192 53-108 (112)
68 KOG3192 Mitochondrial J-type c 97.6 0.00012 2.6E-09 60.2 4.8 65 130-196 7-75 (168)
69 COG1076 DjlA DnaJ-domain-conta 97.1 0.00041 8.8E-09 57.2 3.6 55 131-189 113-173 (174)
70 KOG0431 Auxilin-like protein a 96.6 0.0034 7.4E-08 59.3 5.2 43 148-190 401-449 (453)
71 COG1076 DjlA DnaJ-domain-conta 96.0 0.0026 5.7E-08 52.4 1.1 62 133-196 3-68 (174)
72 PF03656 Pam16: Pam16; InterP 96.0 0.02 4.3E-07 45.5 5.9 57 127-192 54-110 (127)
73 PF13446 RPT: A repeated domai 94.8 0.11 2.4E-06 35.6 5.8 30 128-161 2-31 (62)
74 PF14687 DUF4460: Domain of un 85.5 1.6 3.5E-05 33.8 4.5 47 147-193 6-55 (112)
75 KOG3442 Uncharacterized conser 47.1 33 0.00072 27.5 4.0 40 127-170 55-94 (132)
76 COG2879 Uncharacterized small 41.3 44 0.00094 23.7 3.5 28 155-185 27-54 (65)
77 PF07709 SRR: Seven Residue Re 39.4 25 0.00053 17.4 1.5 13 178-190 2-14 (14)
78 PF05182 Fip1: Fip1 motif; In 27.9 52 0.0011 21.7 2.0 19 33-51 24-42 (45)
79 PF09005 DUF1897: Domain of un 27.0 21 0.00046 22.8 0.0 13 6-18 10-22 (38)
80 KOG3054 Uncharacterized conser 25.6 1.8E+02 0.0038 26.2 5.4 27 39-65 138-165 (299)
81 KOG4538 Predicted coiled-coil 25.5 2.4E+02 0.0053 22.3 5.7 27 31-57 41-71 (130)
82 KOG3960 Myogenic helix-loop-he 21.6 62 0.0014 29.0 1.9 16 176-191 127-142 (284)
83 PF12434 Malate_DH: Malate deh 20.6 1.1E+02 0.0024 18.2 2.2 17 148-164 9-25 (28)
84 COG5552 Uncharacterized conser 20.3 3.6E+02 0.0079 19.9 6.2 30 132-165 4-33 (88)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=8.8e-21 Score=172.32 Aligned_cols=63 Identities=41% Similarity=0.694 Sum_probs=59.0
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
..|||+||||+++| |.+|||+|||+||++||||+|++++ +|+++|++|++||+||+||.+|..
T Consensus 3 ~~dyYeiLGV~k~A----s~~EIKkAYRkLA~kyHPD~n~g~~-~AeeKFKEI~eAYEVLsD~eKRa~ 65 (371)
T COG0484 3 KRDYYEILGVSKDA----SEEEIKKAYRKLAKKYHPDRNPGDK-EAEEKFKEINEAYEVLSDPEKRAA 65 (371)
T ss_pred ccchhhhcCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCCH-HHHHHHHHHHHHHHHhCCHHHHHH
Confidence 36899999999999 9999999999999999999999754 799999999999999999999964
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.1e-19 Score=162.60 Aligned_cols=65 Identities=32% Similarity=0.584 Sum_probs=60.6
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
....|||+||||+.+| +..|||+|||+||++||||+|++++ .|.+.|++|+.||+||+||.+|.+
T Consensus 13 ~~~rDfYelLgV~k~A----sd~eIKkAYRKLALk~HPDkNpddp-~A~e~F~~in~AYEVLsDpekRk~ 77 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNA----SDQEIKKAYRKLALKYHPDKNPDDP-NANEKFKEINAAYEVLSDPEKRKH 77 (336)
T ss_pred hcCCCHHHHhCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCCH-HHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3447999999999999 9999999999999999999999986 799999999999999999999964
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=9.9e-18 Score=152.38 Aligned_cols=61 Identities=33% Similarity=0.606 Sum_probs=57.0
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||++++++ .|+++|++|++||+||+||.+|.
T Consensus 3 ~dyY~vLgv~~~A----s~~eIkkayrkla~k~HPD~~~~~~-~a~~~f~~i~~AYevLsd~~kR~ 63 (369)
T PRK14288 3 LSYYEILEVEKHS----NQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRA 63 (369)
T ss_pred CChHHHcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCCcc-HHHHHHHHHHHHHHHhccHHHHH
Confidence 5899999999999 9999999999999999999998654 58999999999999999999885
No 4
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.69 E-value=9.9e-17 Score=108.82 Aligned_cols=58 Identities=43% Similarity=0.713 Sum_probs=53.9
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcc
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQER 193 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~ 193 (198)
+||+||||++++ +.++|+++|++|++++|||++++..+.+.+.|..|++||++|+||.
T Consensus 2 ~~y~vLgl~~~~----~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 2 DYYEILGVPRDA----SLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 799999999998 9999999999999999999998644578999999999999999985
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=3.5e-17 Score=149.03 Aligned_cols=60 Identities=32% Similarity=0.535 Sum_probs=56.3
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| +.++||+|||+||++||||++++ +.|+++|++|++||+||+||.+|.
T Consensus 4 ~dyY~~Lgv~~~a----~~~eik~ayrkla~~~HPD~n~~--~~a~~~F~~i~~AyevLsD~~KR~ 63 (372)
T PRK14296 4 KDYYEVLGVSKTA----SEQEIRQAYRKLAKQYHPDLNKS--PDAHDKMVEINEAADVLLDKDKRK 63 (372)
T ss_pred CCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHhcCHHHhh
Confidence 5899999999999 99999999999999999999974 368999999999999999999985
No 6
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.68 E-value=7.5e-17 Score=111.22 Aligned_cols=61 Identities=34% Similarity=0.658 Sum_probs=56.6
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
|+|+||||++++ +.++|+++|+++++++|||++++....+.+.|..|++||++|++|.+|.
T Consensus 1 ~~y~iLgl~~~~----~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~ 61 (64)
T PF00226_consen 1 NPYEILGLPPDA----SDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRR 61 (64)
T ss_dssp HHHHHCTSTTTS----SHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred ChHHHCCCCCCC----CHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHH
Confidence 689999999998 9999999999999999999987765568999999999999999998875
No 7
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=6.3e-17 Score=148.24 Aligned_cols=61 Identities=36% Similarity=0.572 Sum_probs=57.3
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| +.++||+|||+||++||||++++++ .|+++|++|++||+||+||.+|.
T Consensus 9 ~Dyy~~Lgv~~~a----~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vLsD~~KR~ 69 (392)
T PRK14279 9 KDFYKELGVSSDA----SAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRK 69 (392)
T ss_pred cCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCh-HHHHHHHHHHHHHHHhcchhhhh
Confidence 6999999999999 9999999999999999999998653 68999999999999999999985
No 8
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=1.1e-16 Score=145.47 Aligned_cols=62 Identities=39% Similarity=0.680 Sum_probs=57.9
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||+++++.+.|+++|++|++||+||+||.+|.
T Consensus 4 ~d~y~~lgv~~~a----~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~ 65 (369)
T PRK14282 4 KDYYEILGVSRNA----TQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRA 65 (369)
T ss_pred CChHHhcCCCCCC----CHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHH
Confidence 5899999999999 9999999999999999999998764568999999999999999999985
No 9
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.3e-16 Score=145.12 Aligned_cols=61 Identities=39% Similarity=0.731 Sum_probs=56.9
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 4 ~d~y~~Lgv~~~a----~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~kR~ 64 (372)
T PRK14286 4 RSYYDILGVSKSA----NDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQ 64 (372)
T ss_pred CCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCch-HHHHHHHHHHHHHHHhccHHHHH
Confidence 5899999999999 9999999999999999999997654 58999999999999999999885
No 10
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.65 E-value=4.1e-16 Score=103.90 Aligned_cols=55 Identities=38% Similarity=0.672 Sum_probs=51.2
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccC
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQ 191 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~d 191 (198)
|||+||||++++ +.++|+++|++|++++|||++++. +.+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~----~~~~ik~~y~~l~~~~HPD~~~~~-~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDA----SDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcC
Confidence 589999999998 999999999999999999999765 4689999999999999986
No 11
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=1.5e-16 Score=143.22 Aligned_cols=58 Identities=38% Similarity=0.637 Sum_probs=55.2
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..+|+||||+++| |.+|||+|||+|+++||||||++ |.++|++|..||+||+||.+|.
T Consensus 4 ~~~y~il~v~~~A----s~~eikkayrkla~k~HpDkn~~----~~ekfkei~~AyevLsd~ekr~ 61 (337)
T KOG0712|consen 4 TKLYDILGVSPDA----SEEEIKKAYRKLALKYHPDKNPD----AGEKFKEISQAYEVLSDPEKRE 61 (337)
T ss_pred cccceeeccCCCc----CHHHHHHHHHHHHHHhCCCCCcc----HHHHHHHHHHHHHHhcCHHHHH
Confidence 5699999999999 99999999999999999999997 6789999999999999999985
No 12
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=2.7e-16 Score=145.39 Aligned_cols=66 Identities=29% Similarity=0.547 Sum_probs=61.9
Q ss_pred CCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 127 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
++.+..||+||||...+ +..+||++||+||++||||++|+..+.|++.|+.|+.||+||+||..|.
T Consensus 4 ~~~~~c~YE~L~v~~~a----~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~ 69 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDA----DDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERA 69 (508)
T ss_pred chhhhHHHHHhcccccC----CHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhh
Confidence 35567899999999999 9999999999999999999999988899999999999999999999874
No 13
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.6e-16 Score=141.96 Aligned_cols=61 Identities=41% Similarity=0.689 Sum_probs=56.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+|+++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 3 ~d~y~iLgv~~~a----~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~kr~ 63 (365)
T PRK14285 3 RDYYEILGLSKGA----SKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRA 63 (365)
T ss_pred CCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHcCcchhH
Confidence 5899999999999 9999999999999999999998654 68899999999999999999885
No 14
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.63 E-value=4.2e-16 Score=144.19 Aligned_cols=58 Identities=36% Similarity=0.527 Sum_probs=54.0
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..|||+||||+++| |.++||+|||+||++||||++++ .++|++|++||+||+||.+|.
T Consensus 27 ~~d~Y~vLGV~~~A----s~~eIKkAYrkla~k~HPDk~~~-----~e~F~~i~~AYevLsD~~kR~ 84 (421)
T PTZ00037 27 NEKLYEVLNLSKDC----TTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRK 84 (421)
T ss_pred chhHHHHcCCCCCC----CHHHHHHHHHHHHHHHCCCCCch-----HHHHHHHHHHHHHhccHHHHH
Confidence 47999999999999 99999999999999999999863 379999999999999999985
No 15
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=4.3e-16 Score=136.08 Aligned_cols=62 Identities=39% Similarity=0.586 Sum_probs=58.5
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..++|+||||++++ |.++|||+||+|++++|||++++++ ++..+|++||.||.||+||.+|.
T Consensus 30 ~~~LYdVLgl~k~a----t~d~IKKaYR~L~~k~HPD~~gd~P-~~~dkf~eIN~Ay~ILsD~~kR~ 91 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTA----TKDEIKKAYRKLALKYHPDKNGDNP-EATDKFKEINTAYAILSDPTKRN 91 (279)
T ss_pred hhHHHHHhCCCccc----chHHHHHHHHHHHHHhCCCcCCCCc-hhHHHHHHHHHHHHHhcChhhhh
Confidence 46899999999999 9999999999999999999999884 68999999999999999999986
No 16
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=4.5e-16 Score=142.49 Aligned_cols=61 Identities=44% Similarity=0.761 Sum_probs=56.7
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ +.++||+|||+||++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 9 ~d~y~~Lgv~~~a----~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~ 69 (389)
T PRK14295 9 KDYYKVLGVPKDA----TEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRK 69 (389)
T ss_pred cCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCCCcCCCch-hHHHHHHHHHHHHHHHCchhhHH
Confidence 5899999999999 9999999999999999999997653 58999999999999999999885
No 17
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=4.6e-16 Score=142.14 Aligned_cols=61 Identities=48% Similarity=0.758 Sum_probs=56.9
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ |.++||+|||+||++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 5 ~d~y~~Lgv~~~a----~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~kr~ 65 (386)
T PRK14277 5 KDYYEILGVDRNA----TEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRA 65 (386)
T ss_pred CCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCCCcCCCch-HHHHHHHHHHHHHHHhCCHHHHH
Confidence 5899999999999 9999999999999999999998654 68899999999999999999885
No 18
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=5.5e-16 Score=141.07 Aligned_cols=60 Identities=40% Similarity=0.681 Sum_probs=56.0
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||++++ +.|+++|++|++||+||+||.+|.
T Consensus 4 ~d~y~~Lgv~~~a----~~~eik~ayr~la~~~HpD~~~~--~~~~~~f~~i~~Ay~~L~d~~kR~ 63 (371)
T PRK14287 4 RDYYEVLGVDRNA----SVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKA 63 (371)
T ss_pred CCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCcHhHHH
Confidence 5899999999999 99999999999999999999874 368899999999999999999885
No 19
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=6.4e-16 Score=136.36 Aligned_cols=60 Identities=35% Similarity=0.635 Sum_probs=55.9
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||++++ +.++++|+.|++||++|+||.+|.
T Consensus 4 ~d~y~vLgv~~~a----~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~kr~ 63 (291)
T PRK14299 4 KDYYAILGVPKNA----SQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRR 63 (291)
T ss_pred CCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhcCHHHHH
Confidence 6899999999999 99999999999999999999874 368999999999999999998874
No 20
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=7.7e-16 Score=139.73 Aligned_cols=61 Identities=39% Similarity=0.666 Sum_probs=56.9
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||+++++. .|+++|+.|++||+||+||.+|.
T Consensus 4 ~d~y~~lgv~~~a----~~~eik~ayr~la~~~HPD~~~~~~-~~~~~f~~~~~Ay~vL~d~~~r~ 64 (366)
T PRK14294 4 RDYYEILGVTRDA----SEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRG 64 (366)
T ss_pred CChHHHhCCCCCC----CHHHHHHHHHHHHHHHCCCCCCCch-HHHHHHHHHHHHHHHhccHHHHH
Confidence 5899999999998 9999999999999999999998654 58899999999999999999885
No 21
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=6.1e-16 Score=140.93 Aligned_cols=60 Identities=40% Similarity=0.687 Sum_probs=56.3
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| +.+|||+|||+||++||||++++ +.|+++|++|++||+||+||.+|.
T Consensus 5 ~d~y~~Lgv~~~a----~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~~Lsd~~kR~ 64 (378)
T PRK14283 5 RDYYEVLGVDRNA----DKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQ 64 (378)
T ss_pred CChHHhhCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhchhHHHH
Confidence 5899999999999 99999999999999999999975 468999999999999999999885
No 22
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=8.2e-16 Score=140.17 Aligned_cols=61 Identities=44% Similarity=0.748 Sum_probs=57.0
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 4 ~d~y~~Lgv~~~a----~~~~ik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~ 64 (380)
T PRK14297 4 KDYYEVLGLEKGA----SDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKA 64 (380)
T ss_pred CChHHhhCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCcH-HHHHHHHHHHHHHHHhcCHhhhC
Confidence 5899999999999 9999999999999999999998654 68999999999999999999885
No 23
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=9e-16 Score=139.75 Aligned_cols=61 Identities=43% Similarity=0.675 Sum_probs=56.9
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ |.++||+|||+||++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 4 ~~~y~~Lgv~~~a----~~~~ik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~kr~ 64 (373)
T PRK14301 4 RDYYEVLGVSRDA----SEDEIKKAYRKLALQYHPDRNPDNP-EAEQKFKEAAEAYEVLRDAEKRA 64 (373)
T ss_pred CChHHhcCCCCCC----CHHHHHHHHHHHHHHhCCCcCCCCh-HHHHHHHHHHHHHHHhcchhhhh
Confidence 5899999999998 9999999999999999999998654 58899999999999999999885
No 24
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=8.2e-16 Score=140.71 Aligned_cols=61 Identities=38% Similarity=0.679 Sum_probs=56.6
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 1 ~d~y~iLgv~~~a----~~~eikkayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~kR~ 61 (391)
T PRK14284 1 MDYYTILGVSKTA----SPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRE 61 (391)
T ss_pred CCHHHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCch-HHHHHHHHHHHHHHHhcCHHHHH
Confidence 3799999999999 9999999999999999999998654 58999999999999999998885
No 25
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9.8e-16 Score=139.02 Aligned_cols=62 Identities=44% Similarity=0.730 Sum_probs=58.1
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+|+++||||+++++.+.|+++|+.|++||+||+||.+|.
T Consensus 3 ~d~y~vLgv~~~a----~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~ 64 (365)
T PRK14290 3 KDYYKILGVDRNA----SQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRR 64 (365)
T ss_pred CChhhhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhh
Confidence 5899999999999 9999999999999999999998766579999999999999999999885
No 26
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9e-16 Score=139.99 Aligned_cols=60 Identities=35% Similarity=0.615 Sum_probs=56.1
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ |.++||+|||+||++||||++++ +.|+++|++|++||+||+||.+|.
T Consensus 5 ~d~y~iLgv~~~a----~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~kR~ 64 (377)
T PRK14298 5 RDYYEILGLSKDA----SVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRA 64 (377)
T ss_pred CCHHHhhCCCCCC----CHHHHHHHHHHHHHHhCccccCC--hhHHHHHHHHHHHHHHhcchHhhh
Confidence 5899999999999 99999999999999999999874 368899999999999999999885
No 27
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9.2e-16 Score=139.93 Aligned_cols=60 Identities=37% Similarity=0.632 Sum_probs=56.1
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| |.++||+|||+||++||||++++ +.|+++|++|++||+||+||.+|.
T Consensus 4 ~d~y~~Lgv~~~a----~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~ 63 (380)
T PRK14276 4 TEYYDRLGVSKDA----SQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRA 63 (380)
T ss_pred CCHHHhhCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhcCHhhhh
Confidence 5899999999999 99999999999999999999975 358899999999999999999985
No 28
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=1.2e-15 Score=138.51 Aligned_cols=61 Identities=44% Similarity=0.732 Sum_probs=56.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| +.++||+|||+||++||||+++++. .|+++|++|++||++|+||.+|.
T Consensus 4 ~d~y~iLgv~~~a----s~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~ 64 (371)
T PRK10767 4 RDYYEVLGVSRNA----SEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRA 64 (371)
T ss_pred CChHHhcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHHHHHHHHhcchhhhh
Confidence 5899999999999 9999999999999999999997654 58899999999999999999885
No 29
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9.2e-16 Score=140.02 Aligned_cols=60 Identities=38% Similarity=0.657 Sum_probs=56.1
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| +.++||+|||+||++||||++++ +.|+++|+.|++||+||+||.+|.
T Consensus 3 ~d~Y~~Lgv~~~a----~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vLsd~~kR~ 62 (382)
T PRK14291 3 KDYYEILGVSRNA----TQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRK 62 (382)
T ss_pred CCHHHhhCCCCCC----CHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhcCHHHHH
Confidence 5899999999999 99999999999999999999975 368899999999999999999885
No 30
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9.3e-16 Score=139.89 Aligned_cols=60 Identities=43% Similarity=0.708 Sum_probs=56.1
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| +.++||+|||+||++||||++++ +.|+++|++|++||+||+||.+|.
T Consensus 3 ~d~y~iLgv~~~a----~~~eik~ayr~la~~~hpD~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~ 62 (378)
T PRK14278 3 RDYYGLLGVSRNA----SDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRR 62 (378)
T ss_pred CCcceecCCCCCC----CHHHHHHHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHHHHhchhhhhh
Confidence 5899999999999 99999999999999999999984 468999999999999999999885
No 31
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=1.1e-15 Score=135.78 Aligned_cols=62 Identities=39% Similarity=0.673 Sum_probs=59.0
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..|||.||||++++ +..+|++||+.++++|||||||+++. |.++|+.|.+||+||+||..|.
T Consensus 4 ~~dyY~lLgi~~~a----t~~eIkKaYr~kaL~~HPDKNp~dP~-A~ekFq~L~eAy~VL~D~~~R~ 65 (296)
T KOG0691|consen 4 DTDYYDLLGISEDA----TDAEIKKAYRKKALQYHPDKNPGDPQ-AAEKFQELSEAYEVLSDEESRA 65 (296)
T ss_pred cchHHHHhCCCCCC----CHHHHHHHHHHHHHhcCCCCCCCChH-HHHHHHHHHHHHHHhcCHHHHH
Confidence 36899999999999 99999999999999999999999986 9999999999999999999885
No 32
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.3e-15 Score=139.82 Aligned_cols=61 Identities=43% Similarity=0.669 Sum_probs=56.7
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ +.++||+|||+|+++||||+++++. .|+++|++|++||+||+||.+|.
T Consensus 3 ~d~y~iLgv~~~a----~~~eikkayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~ 63 (397)
T PRK14281 3 RDYYEVLGVSRSA----DKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRR 63 (397)
T ss_pred CChhhhcCCCCCC----CHHHHHHHHHHHHHHHCCCcCCCch-HHHHHHHHHHHHHHHhhhhhhhh
Confidence 5899999999998 9999999999999999999998654 58899999999999999999885
No 33
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.4e-15 Score=138.62 Aligned_cols=60 Identities=38% Similarity=0.698 Sum_probs=56.0
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||+++| +.++||+|||+|+++||||++++ +.|+++|++|++||+||+||.+|.
T Consensus 4 ~~~y~iLgv~~~a----~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~ 63 (376)
T PRK14280 4 RDYYEVLGVSKSA----SKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRA 63 (376)
T ss_pred CChHHhhCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhccHhHHH
Confidence 5899999999999 99999999999999999999875 358899999999999999999885
No 34
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.56 E-value=4.2e-15 Score=131.96 Aligned_cols=60 Identities=33% Similarity=0.609 Sum_probs=55.7
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ +.++||+|||+||++||||++++ +.|+++|++|++||++|+||.+|.
T Consensus 4 ~d~y~~Lgv~~~a----~~~eik~ayr~la~k~HPD~~~~--~~~~~~f~~i~~Ay~~L~~~~kr~ 63 (306)
T PRK10266 4 KDYYAIMGVKPTD----DLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRA 63 (306)
T ss_pred CChHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhhhHHHHH
Confidence 6899999999998 99999999999999999999864 368999999999999999999884
No 35
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=5.3e-15 Score=134.34 Aligned_cols=61 Identities=31% Similarity=0.597 Sum_probs=56.4
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
+.|||+||||++++ |.++||+||++|+++||||++++ +.|.++|+.|++||+||+||.+|.
T Consensus 1 ~~d~y~~Lgv~~~a----~~~~ik~ayr~l~~~~hpD~~~~--~~a~~~~~~i~~Ay~vL~d~~~r~ 61 (371)
T PRK14292 1 MMDYYELLGVSRTA----SADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRA 61 (371)
T ss_pred CCChHHHcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCC--hhHHHHHHHHHHHHHHhcchhhhh
Confidence 36899999999999 99999999999999999999974 368899999999999999999885
No 36
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=4.8e-15 Score=131.21 Aligned_cols=62 Identities=45% Similarity=0.666 Sum_probs=57.7
Q ss_pred ChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 129 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
...|||+||||++++ +..|||+||++|+++||||.+.++ .|.++|++|.+||+||+|+.+|.
T Consensus 41 ~~~d~Y~vLgv~~~A----t~~EIK~Af~~LaKkyHPD~n~~~--~a~~kF~eI~~AYEiLsd~eKR~ 102 (288)
T KOG0715|consen 41 SKEDYYKVLGVSRNA----TLSEIKSAFRKLAKKYHPDVNKDK--EASKKFKEISEAYEILSDEEKRQ 102 (288)
T ss_pred CCcchhhhhCcCCCC----CHHHHHHHHHHHHHhhCCCCCCCc--chhhHHHHHHHHHHHhcCHHHHH
Confidence 334899999999999 999999999999999999999876 79999999999999999999885
No 37
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=6e-15 Score=134.67 Aligned_cols=61 Identities=43% Similarity=0.702 Sum_probs=56.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ |.+||++|||+||++||||++++++ .|+++|+.|++||++|+||.+|.
T Consensus 5 ~~~y~~Lgv~~~a----~~~eik~ayr~la~~~HpD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~R~ 65 (386)
T PRK14289 5 RDYYEVLGVSKTA----TVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRS 65 (386)
T ss_pred CCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCCCh-HHHHHHHHHHHHHHHhcCHHHHH
Confidence 5899999999999 9999999999999999999998664 58999999999999999998875
No 38
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.55 E-value=4.6e-15 Score=133.75 Aligned_cols=59 Identities=41% Similarity=0.705 Sum_probs=54.8
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
|||+||||++++ +.++||+||++||++||||+++. +.|+++|+.|++||+||+||.+|.
T Consensus 1 d~y~~Lgv~~~a----~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~~R~ 59 (354)
T TIGR02349 1 DYYEILGVSKDA----SEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRA 59 (354)
T ss_pred ChHHhCCCCCCC----CHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhhChHHHH
Confidence 699999999998 99999999999999999999973 357899999999999999999885
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=1.4e-14 Score=116.78 Aligned_cols=64 Identities=36% Similarity=0.609 Sum_probs=58.5
Q ss_pred ChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 129 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
...++|+||||++++ +..+|++||++|++++|||+++++...|.+.|+.|++||++|+|+..|.
T Consensus 4 ~~~~~y~iLgv~~~a----s~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~ 67 (237)
T COG2214 4 DLLDYYEILGVPPNA----SLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRA 67 (237)
T ss_pred hhhhHHHHhCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHH
Confidence 457899999999998 9999999999999999999998765358999999999999999998874
No 40
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=8.9e-15 Score=133.16 Aligned_cols=60 Identities=35% Similarity=0.686 Sum_probs=55.5
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ |.++||+|||+|+++||||++++ +.++++|++|++||++|+||.+|.
T Consensus 3 ~~~y~iLgv~~~a----s~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~ 62 (372)
T PRK14300 3 QDYYQILGVSKTA----SQADLKKAYLKLAKQYHPDTTDA--KDAEKKFKEINAAYDVLKDEQKRA 62 (372)
T ss_pred CChHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhhhHhHhh
Confidence 5899999999999 99999999999999999999874 357889999999999999999885
No 41
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.6e-14 Score=131.42 Aligned_cols=60 Identities=33% Similarity=0.625 Sum_probs=55.6
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ +.++||+|||+|+++||||++++ +.|+++|+.|++||+||+||.+|.
T Consensus 3 ~d~y~vLgv~~~a----~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~vL~~~~~R~ 62 (374)
T PRK14293 3 ADYYEILGVSRDA----DKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRA 62 (374)
T ss_pred CChhhhcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHHHHHHHhchHHHH
Confidence 5899999999998 99999999999999999999875 358899999999999999999884
No 42
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=3e-14 Score=121.37 Aligned_cols=61 Identities=31% Similarity=0.561 Sum_probs=55.2
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
-|||+||||++++ +..|||+|||+|+++|||||++.. .+.++.|..|++||..|+|+..|.
T Consensus 99 fDPyEILGl~pga----s~~eIKkaYR~LSik~HPDK~~~~-~~~e~~~~~I~KAY~aLTD~~sre 159 (230)
T KOG0721|consen 99 FDPYEILGLDPGA----SEKEIKKAYRRLSIKYHPDKQPPE-EGDEEFFEAIAKAYQALTDKKSRE 159 (230)
T ss_pred CCcHHhhCCCCCC----CHHHHHHHHHHhhhhhCCCcCCCc-chhHHHHHHHHHHHHHhcchhhHH
Confidence 4799999999999 999999999999999999998653 356789999999999999998774
No 43
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=3.3e-14 Score=131.97 Aligned_cols=62 Identities=35% Similarity=0.609 Sum_probs=57.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQ--GNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~--~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.++|.+|+|+++| |.+||++|||++++.|||||+. +.++.|+++|+.|..||+||+||.+|.
T Consensus 9 ~e~Ya~LNlpkdA----t~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRa 72 (546)
T KOG0718|consen 9 IELYALLNLPKDA----TDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRA 72 (546)
T ss_pred hhHHHHhCCCccc----CHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 5899999999999 9999999999999999999985 346789999999999999999999985
No 44
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.49 E-value=3.7e-14 Score=140.86 Aligned_cols=63 Identities=22% Similarity=0.347 Sum_probs=57.8
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
....+||+||||+++| |..+||+|||+||++||||+++++ .|..+|+.|++||+||+||.+|.
T Consensus 570 ~~d~dYYdILGVs~dA----S~~EIKKAYRKLAlkyHPDKN~~~--~A~ekFq~I~EAYeVLSDp~kRk 632 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNA----DMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKK 632 (1136)
T ss_pred CCCCChHHHcCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHhCCHHHHH
Confidence 3346899999999999 999999999999999999999875 47789999999999999999985
No 45
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=4.7e-14 Score=121.44 Aligned_cols=65 Identities=32% Similarity=0.589 Sum_probs=58.3
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CChHHHHHHHHHHHHHHHHccCccccc
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQ-GNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~-~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
+...|+|+||||..++ +..+|++||++|++.+|||+++ .+...|.++|+.|+.||.||+|+.+|.
T Consensus 11 f~~~d~YevLGVer~a----~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~ 76 (264)
T KOG0719|consen 11 FNKKDLYEVLGVERDA----TDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRA 76 (264)
T ss_pred ccccCHHHHhhhcccC----CHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4446999999999999 9999999999999999999985 234579999999999999999998885
No 46
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=1.4e-13 Score=113.61 Aligned_cols=63 Identities=16% Similarity=0.298 Sum_probs=54.8
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHHHccCccccc
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK----EAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~----~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
|||+||||++.+ .++..+|+++|++|++++|||+..+.. ..|.+.|..||+||++|+||.+|.
T Consensus 2 ~yf~llgl~~~~--~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra 68 (171)
T PRK05014 2 DYFTLFGLPARY--DIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRA 68 (171)
T ss_pred CHHHHCCCCCCC--CCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHH
Confidence 799999999975 458999999999999999999976432 237789999999999999999875
No 47
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=2.7e-13 Score=111.51 Aligned_cols=64 Identities=20% Similarity=0.281 Sum_probs=54.7
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN--KEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~--~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++.. .++..+|+++|++|++++|||+..+. +..+...+..||+||++|+||.+|.
T Consensus 2 ~~yf~llgl~~~f--~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra 67 (166)
T PRK01356 2 QNYFQLLGLPQEY--NIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRA 67 (166)
T ss_pred CCHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 5899999999974 45999999999999999999998643 2235567899999999999999885
No 48
>PHA03102 Small T antigen; Reviewed
Probab=99.41 E-value=3.5e-13 Score=109.77 Aligned_cols=61 Identities=28% Similarity=0.438 Sum_probs=53.0
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
.+.+|+||||++++-. |.++||+|||++++++|||++++ .++|+.||+||++|+|+.+|..
T Consensus 4 ~~~l~~vLGl~~~A~~--s~~eIKkAYr~la~~~HPDkgg~-----~e~~k~in~Ay~~L~d~~~r~~ 64 (153)
T PHA03102 4 SKELMDLLGLPRSAWG--NLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSLR 64 (153)
T ss_pred HHHHHHHcCCCCCCCC--CHHHHHHHHHHHHHHHCcCCCch-----hHHHHHHHHHHHHHhhHHHhcc
Confidence 3679999999987622 89999999999999999999754 4699999999999999987753
No 49
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.38 E-value=9.7e-13 Score=108.95 Aligned_cols=64 Identities=19% Similarity=0.324 Sum_probs=56.4
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK----EAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~----~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.+||++|||++.. .++..+|+++|++|++++|||+..+.. ..+.+.+..||+||++|+||.+|.
T Consensus 4 ~~~F~l~~l~~~f--~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra 71 (173)
T PRK00294 4 PCHFALFDLQPSF--RLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRA 71 (173)
T ss_pred CChhhhcCcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhH
Confidence 6899999999976 678999999999999999999986542 347788999999999999999885
No 50
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.38 E-value=1.2e-12 Score=108.55 Aligned_cols=64 Identities=22% Similarity=0.358 Sum_probs=54.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK----EAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~----~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++.+ .++..+|+++|++|++++|||++++.. ..+.+.+..||+||++|+||.+|.
T Consensus 6 ~dyf~llglp~~f--~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra 73 (176)
T PRK03578 6 DDHFSLFGLPARF--ALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRA 73 (176)
T ss_pred CCHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHH
Confidence 6899999999965 568999999999999999999986432 225666799999999999999885
No 51
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.37 E-value=8.7e-13 Score=115.62 Aligned_cols=62 Identities=35% Similarity=0.529 Sum_probs=54.1
Q ss_pred CCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--C----hHHHHHHHHHHHHHHHHccCc
Q 029159 127 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQG--N----KEAAEAKFKEVMVSYEAIKQE 192 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~--~----~~~A~e~Fk~In~AYevL~dp 192 (198)
..+..++|+||||++++ |.++||++||+|+++||||+..+ . .+.|+++|++|++||++|+..
T Consensus 196 ~~~~~~ay~vLgv~~~a----s~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 196 GPTLEDAYKVLGVSESD----DDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CCcHHhHHHHcCCCCCC----CHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 35568999999999998 99999999999999999999632 1 246899999999999999864
No 52
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.35 E-value=2e-12 Score=100.92 Aligned_cols=55 Identities=18% Similarity=0.237 Sum_probs=48.4
Q ss_pred CCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHcc
Q 029159 127 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIK 190 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~ 190 (198)
..+..++|+||||++++ |.++|+++|++|++++|||++++ .+.|++|++||++|.
T Consensus 61 ~Ms~~eAy~ILGv~~~A----s~~eIkkaYRrLa~~~HPDkgGs-----~~~~~kIneAyevL~ 115 (116)
T PTZ00100 61 PMSKSEAYKILNISPTA----SKERIREAHKQLMLRNHPDNGGS-----TYIASKVNEAKDLLL 115 (116)
T ss_pred CCCHHHHHHHcCCCCCC----CHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHh
Confidence 34457999999999998 99999999999999999999643 368899999999995
No 53
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.33 E-value=1.6e-12 Score=126.96 Aligned_cols=60 Identities=38% Similarity=0.619 Sum_probs=55.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ +.++||+|||+|+++||||++++ +.+..+|+.|++||++|+||.+|.
T Consensus 2 ~DYYeVLGVs~dA----S~eEIKKAYRKLAKKyHPDKn~~--~eAeekFqeINEAYEVLSDP~KRa 61 (871)
T TIGR03835 2 RDYYEVLGIDRDA----DEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEANDVLSNPKKRA 61 (871)
T ss_pred CChhHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCCHHHHH
Confidence 4899999999998 99999999999999999999876 467889999999999999999885
No 54
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.28 E-value=3.5e-12 Score=116.00 Aligned_cols=64 Identities=31% Similarity=0.524 Sum_probs=58.7
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHHHccCcccccC
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN--KEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~--~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
..|||+||||.+++ +..||.||||+|+.+||||...+. ++.|+.+|..|..|-+||+||.+|++
T Consensus 393 kRDYYKILGVkRnA----sKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrq 458 (504)
T KOG0624|consen 393 KRDYYKILGVKRNA----SKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQ 458 (504)
T ss_pred cchHHHHhhhcccc----cHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhh
Confidence 36999999999999 999999999999999999998764 45699999999999999999999864
No 55
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=1.5e-11 Score=103.93 Aligned_cols=62 Identities=42% Similarity=0.708 Sum_probs=55.6
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|+|+||||.+.+ +..+|++||++|++++|||+++.....|+.+|++|.+||++|+|+.+|.
T Consensus 3 ~d~~~~l~i~~~a----s~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~ 64 (306)
T KOG0714|consen 3 KDYYKILGIARSA----SEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRK 64 (306)
T ss_pred ccHHHHhCccccc----cHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhh
Confidence 6899999999888 8889999999999999999987664456668999999999999999885
No 56
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=2.1e-11 Score=113.22 Aligned_cols=63 Identities=35% Similarity=0.511 Sum_probs=58.0
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.+..|+|.||||+++. +.++||+.||+||+..|||||.. +.|++.|+.|..||++|+|+.+|+
T Consensus 232 ~~~~daYsvlGl~~d~----sd~~lKk~Yrk~A~LVhPDKn~~--~~A~Eafk~Lq~Afevig~~~kR~ 294 (490)
T KOG0720|consen 232 LNILDAYSALGLPSDC----SDADLKKNYRKKAMLVHPDKNMI--PRAEEAFKKLQVAFEVIGDSVKRK 294 (490)
T ss_pred hcCCCchhhcCCCCCC----CHHHHHHHHHhhceEeCCCccCC--hhHHHHHHHHHHHHHHhcchhhhh
Confidence 3367999999999988 99999999999999999999984 479999999999999999999885
No 57
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=2.1e-11 Score=106.71 Aligned_cols=61 Identities=30% Similarity=0.555 Sum_probs=55.2
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.+|.|+||||.+.+ +..+|.+|||+||++||||++.+. .+.+.|+.|..||++|+|...|.
T Consensus 32 ~enCYdVLgV~Rea----~KseIakAYRqLARrhHPDr~r~~--e~k~~F~~iAtayeilkd~e~rt 92 (329)
T KOG0722|consen 32 AENCYDVLGVAREA----NKSEIAKAYRQLARRHHPDRNRDP--ESKKLFVKIATAYEILKDNETRT 92 (329)
T ss_pred chhHHHHhhhhhhc----cHHHHHHHHHHHHHHhCCcccCCc--hhhhhhhhhhcccccccchhhHH
Confidence 37899999999999 999999999999999999999874 45689999999999999987653
No 58
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=3.8e-11 Score=101.85 Aligned_cols=68 Identities=25% Similarity=0.430 Sum_probs=60.6
Q ss_pred CCCCCCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccc
Q 029159 123 RESESYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKD 195 (198)
Q Consensus 123 ~~~~~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR 195 (198)
+++..++ .++|+||.|+|.. +.++||+.||+|++..|||+|+++.+.|...|-.|.+||.+|-|+..|
T Consensus 46 pgstyfn-LNpfeVLqIdpev----~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~r 113 (250)
T KOG1150|consen 46 PGSTYFN-LNPFEVLQIDPEV----TDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIR 113 (250)
T ss_pred CCccccc-cChHHHHhcCCCC----CHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 3444444 4899999999998 999999999999999999999999889999999999999999998754
No 59
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.14 E-value=9.9e-11 Score=96.99 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=56.5
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN----KEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~----~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
+.|||++|||++.. .++...|++.|+.|.+++|||+..+. +..|.+....||+||.+|+||.+|.
T Consensus 1 ~~nyF~lf~lp~~F--~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA 69 (173)
T PRK01773 1 MNNPFALFDLPVDF--QLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRA 69 (173)
T ss_pred CCChHHhcCCCCCC--CCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHH
Confidence 46899999999975 67999999999999999999997543 2346778899999999999999885
No 60
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=3.9e-11 Score=110.70 Aligned_cols=63 Identities=40% Similarity=0.622 Sum_probs=59.4
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..|+|.||||...+ +..+||+||+++++.+|||++.++..+++.+|++|-+||.||+||.+|.
T Consensus 372 Rkd~ykilGi~~~a----s~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~ 434 (486)
T KOG0550|consen 372 RKDWYKILGISRNA----SDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRV 434 (486)
T ss_pred hhhHHHHhhhhhhc----ccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHh
Confidence 46899999999999 9999999999999999999999887789999999999999999998874
No 61
>PHA02624 large T antigen; Provisional
Probab=99.03 E-value=3.3e-10 Score=109.14 Aligned_cols=60 Identities=25% Similarity=0.354 Sum_probs=52.1
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..++|+||||++++ -.+.++||+|||+++++||||++++ +++|++|+.||++|+|+.++.
T Consensus 10 ~~elyelLGL~~~A--~gs~~eIKkAYRkLAkkyHPDKgGd-----eekfk~Ln~AYevL~d~~k~~ 69 (647)
T PHA02624 10 SKELMDLLGLPMAA--WGNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKSA 69 (647)
T ss_pred HHHHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHCcCCCCc-----HHHHHHHHHHHHHHhcHHHhh
Confidence 46899999999975 1288999999999999999999743 579999999999999987764
No 62
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.96 E-value=4.2e-10 Score=104.85 Aligned_cols=62 Identities=26% Similarity=0.528 Sum_probs=55.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----ChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQG----NKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~----~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
-|+|+||||+.++ +..+||++||+|++++||||.+. .+...++..++|++||+.|+|...|.
T Consensus 98 fDPyEILGI~~~t----s~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~re 163 (610)
T COG5407 98 FDPYEILGIDQDT----SERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRE 163 (610)
T ss_pred CChHHhhcccCCC----cHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 4799999999999 99999999999999999999764 35568999999999999999987764
No 63
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.88 E-value=3.7e-09 Score=86.21 Aligned_cols=51 Identities=14% Similarity=0.279 Sum_probs=43.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHHHccCccccc
Q 029159 146 PYTEAEIKTAFRAKAKEFHPDQNQGN----KEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 146 ~~t~~eIKkAYRkLakk~HPDk~~~~----~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.++..+|+++|++|++++|||+.++. +..+...+..||+||++|+||.+|.
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra 56 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRA 56 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhH
Confidence 35889999999999999999996432 3347889999999999999999885
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=1.4e-08 Score=89.89 Aligned_cols=71 Identities=23% Similarity=0.451 Sum_probs=58.6
Q ss_pred CCCCCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC--CCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 124 ESESYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQN--QGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 124 ~~~~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~--~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
....+...|+|.+|||+.- ...+++.+|.+++++.+.+||||+. +++. ...+.|+.|+.||+||+|+..|.
T Consensus 36 d~k~Wk~~DlYa~lgLsky-R~ka~~~qi~kah~kkv~kyHPDk~aa~g~~-~~d~fFk~iqkA~evL~D~~~R~ 108 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKY-RTKAIPPQILKAHKKKVYKYHPDKTAAGGNK-GCDEFFKLIQKAREVLGDRKLRL 108 (379)
T ss_pred hhhhhhhhhHHHHhchHhh-hcCCCcHHHHHHHHHHHHHhCccchhccCCC-CcHHHHHHHHHHHHHhccHHHHh
Confidence 4455666899999999976 3445888999999999999999996 2332 57889999999999999998774
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=1.2e-07 Score=95.83 Aligned_cols=65 Identities=23% Similarity=0.394 Sum_probs=53.8
Q ss_pred CCCCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcc
Q 029159 125 SESYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQER 193 (198)
Q Consensus 125 ~~~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~ 193 (198)
+...+..++|+||.|+-+..+..+.+.||++|++|+.+|||||||. -.++|..||+||+.|+...
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE----GRemFe~VnKAYE~L~~~t 1339 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE----GREMFERVNKAYELLSSET 1339 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch----HHHHHHHHHHHHHHHHHHH
Confidence 3455667899999999764444466999999999999999999985 4679999999999998543
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=1.8e-06 Score=75.35 Aligned_cols=56 Identities=23% Similarity=0.509 Sum_probs=49.2
Q ss_pred ChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHH-Hcc
Q 029159 129 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYE-AIK 190 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYe-vL~ 190 (198)
....+|.||||..++ +.++|+.+|.+|++++|||.+... +..+.|.+|.+||. ||.
T Consensus 45 ~~~e~fril~v~e~~----~adevr~af~~lakq~hpdsgs~~--adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 45 KIMECFRILGVEEGA----DADEVREAFHDLAKQVHPDSGSEE--ADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred HHHHHHHHhcccccC----chhHHHHHHHHHHHHcCCCCCCcc--ccHHHHHHHHHHHHHHHH
Confidence 346899999999999 999999999999999999998653 45679999999998 665
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.18 E-value=4e-06 Score=64.74 Aligned_cols=56 Identities=18% Similarity=0.173 Sum_probs=46.9
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCc
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQE 192 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp 192 (198)
++...+-.||||.++. +.+.||.|+|++++..|||+++..- .-.+||+|+++|...
T Consensus 53 Msr~EA~lIL~v~~s~----~k~KikeaHrriM~~NHPD~GGSPY-----lAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 53 MSRREAALILGVTPSL----DKDKIKEAHRRIMLANHPDRGGSPY-----LASKINEAKDLLEGT 108 (112)
T ss_pred cchHHHHHHhCCCccc----cHHHHHHHHHHHHHcCCCcCCCCHH-----HHHHHHHHHHHHhcc
Confidence 4446788899999988 9999999999999999999997642 234599999999754
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.55 E-value=0.00012 Score=60.18 Aligned_cols=65 Identities=18% Similarity=0.396 Sum_probs=53.6
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQ----GNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~----~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..+||.+||..... +++++-++-.|....++.|||+.. +....|.+...+||+||.+|+||-.|.
T Consensus 7 ~~~ff~~Fg~e~~~--~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA 75 (168)
T KOG3192|consen 7 PSRFFDIFGMELSF--KIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARA 75 (168)
T ss_pred HHHHHHHhccccCC--CCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHH
Confidence 46899999998865 457777887999999999999953 223357888999999999999998875
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.00041 Score=57.20 Aligned_cols=55 Identities=33% Similarity=0.500 Sum_probs=47.7
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CC----hHHHHHHHHHHHHHHHHc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQ--GN----KEAAEAKFKEVMVSYEAI 189 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~--~~----~~~A~e~Fk~In~AYevL 189 (198)
.++|.+||+...+ +..+|+++|++++..+|||+-. +. -+.+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~----~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKA----DQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhh----hHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999998 9999999999999999999942 22 235889999999999865
No 70
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.57 E-value=0.0034 Score=59.27 Aligned_cols=43 Identities=30% Similarity=0.431 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHHHcc
Q 029159 148 TEAEIKTAFRAKAKEFHPDQNQGN------KEAAEAKFKEVMVSYEAIK 190 (198)
Q Consensus 148 t~~eIKkAYRkLakk~HPDk~~~~------~~~A~e~Fk~In~AYevL~ 190 (198)
+.+.|||+||+.++..||||.++. +-.|++.|-.+.+|++...
T Consensus 401 tp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~ 449 (453)
T KOG0431|consen 401 TPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN 449 (453)
T ss_pred CHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 889999999999999999997543 2246777777777776544
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.01 E-value=0.0026 Score=52.39 Aligned_cols=62 Identities=21% Similarity=0.331 Sum_probs=48.8
Q ss_pred hhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHHHccCccccc
Q 029159 133 HYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN----KEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 133 ~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~----~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
++.++|+++.+ ..+.+.++..|+.+.+.+|||+.... ...+...+..+|.||.+|++|..|.
T Consensus 3 ~~~~~~~~~~f--~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra 68 (174)
T COG1076 3 GFVLFGLPRAF--QIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRA 68 (174)
T ss_pred cccccccHHHH--HHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 45566777655 44778899999999999999997533 2236678999999999999998764
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=95.97 E-value=0.02 Score=45.54 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=38.2
Q ss_pred CCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCc
Q 029159 127 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQE 192 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp 192 (198)
.+++.....||||++.. +.++|.+.|..|....+|++++.. -.=.+|..|.+.|..+
T Consensus 54 ~Mtl~EA~~ILnv~~~~----~~eeI~k~y~~Lf~~Nd~~kGGSf-----YLQSKV~rAKErl~~E 110 (127)
T PF03656_consen 54 GMTLDEARQILNVKEEL----SREEIQKRYKHLFKANDPSKGGSF-----YLQSKVFRAKERLEQE 110 (127)
T ss_dssp ---HHHHHHHHT--G------SHHHHHHHHHHHHHHT-CCCTS-H-----HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCcc----CHHHHHHHHHHHHhccCCCcCCCH-----HHHHHHHHHHHHHHHH
Confidence 57778999999999977 999999999999999999998652 1223466666666543
No 73
>PF13446 RPT: A repeated domain in UCH-protein
Probab=94.83 E-value=0.11 Score=35.58 Aligned_cols=30 Identities=27% Similarity=0.504 Sum_probs=26.9
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHH
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAK 161 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLak 161 (198)
++..++|.+|||++.. +.+.|-.+|...+.
T Consensus 2 ~~~~~Ay~~Lgi~~~~----~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 2 MDVEEAYEILGIDEDT----DDDFIISAFQSKVN 31 (62)
T ss_pred CCHHHHHHHhCcCCCC----CHHHHHHHHHHHHH
Confidence 4567899999999887 99999999999888
No 74
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=85.51 E-value=1.6 Score=33.85 Aligned_cols=47 Identities=19% Similarity=0.335 Sum_probs=37.3
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHHHHHHHHccCcc
Q 029159 147 YTEAEIKTAFRAKAKEFHPDQNQGN---KEAAEAKFKEVMVSYEAIKQER 193 (198)
Q Consensus 147 ~t~~eIKkAYRkLakk~HPDk~~~~---~~~A~e~Fk~In~AYevL~dp~ 193 (198)
++..+++.|.|.+-++.|||..... +...++-++.|+.-.+.|..+.
T Consensus 6 ~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 6 LSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 3778999999999999999986443 3345777888888888888754
No 75
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.09 E-value=33 Score=27.47 Aligned_cols=40 Identities=10% Similarity=0.137 Sum_probs=35.1
Q ss_pred CCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 029159 127 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQG 170 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~ 170 (198)
..++.....||+|++.. +.++|-+.|-.|-....|.+++.
T Consensus 55 ~iTlqEa~qILnV~~~l----n~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 55 KITLQEAQQILNVKEPL----NREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred cccHHHHhhHhCCCCCC----CHHHHHHHHHHHHhccCcccCcc
Confidence 47788999999999865 99999999999999998888764
No 76
>COG2879 Uncharacterized small protein [Function unknown]
Probab=41.33 E-value=44 Score=23.73 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=21.6
Q ss_pred HHHHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 029159 155 AFRAKAKEFHPDQNQGNKEAAEAKFKEVMVS 185 (198)
Q Consensus 155 AYRkLakk~HPDk~~~~~~~A~e~Fk~In~A 185 (198)
.|..-+++.|||+.+-. -++.|++..+|
T Consensus 27 nYVehmr~~hPd~p~mT---~~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPMT---YEEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCccc---HHHHHHHHHHh
Confidence 57888999999998863 35777776665
No 77
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=39.44 E-value=25 Score=17.36 Aligned_cols=13 Identities=38% Similarity=0.708 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHcc
Q 029159 178 KFKEVMVSYEAIK 190 (198)
Q Consensus 178 ~Fk~In~AYevL~ 190 (198)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4677888888774
No 78
>PF05182 Fip1: Fip1 motif; InterPro: IPR007854 This short motif is about 40 amino acids in length and is found in the Fip1 protein that is a component of a Saccharomyces cerevisiae pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase []. This region of Fip1 is needed for the interaction with the Yth1 subunit of the complex and for specific polyadenylation of the cleaved mRNA precursor [].
Probab=27.87 E-value=52 Score=21.67 Aligned_cols=19 Identities=37% Similarity=0.971 Sum_probs=14.3
Q ss_pred CcchhhHHHHHHHHHHHHH
Q 029159 33 FRSSFQEEAWKRYNRRMRE 51 (198)
Q Consensus 33 ~~~~~~~~~~~~~~~r~~~ 51 (198)
|==+|.|+.|+.|-+++++
T Consensus 24 FNYGf~E~tW~~Y~~kq~~ 42 (45)
T PF05182_consen 24 FNYGFNEETWREYCKKQRQ 42 (45)
T ss_pred cCCCCCHHHHHHHHHHHHH
Confidence 4446889999999776654
No 79
>PF09005 DUF1897: Domain of unknown function (DUF1897); InterPro: IPR015096 This domain is found in Psi proteins produced by Drosophila, and in various eukaryotic hypothetical proteins. It has no known function. ; PDB: 2BN6_A 2BN5_A.
Probab=27.01 E-value=21 Score=22.76 Aligned_cols=13 Identities=38% Similarity=1.027 Sum_probs=8.8
Q ss_pred cCCCchhhhhhhh
Q 029159 6 SYSNGWIEYFVSL 18 (198)
Q Consensus 6 ~~~~~~~~~~~~~ 18 (198)
.||--|+.||.++
T Consensus 10 DYSaqW~eYYr~~ 22 (38)
T PF09005_consen 10 DYSAQWAEYYRQI 22 (38)
T ss_dssp --CCHHHHHHCCC
T ss_pred CHHHHHHHHHHHc
Confidence 3778888888776
No 80
>KOG3054 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.57 E-value=1.8e+02 Score=26.19 Aligned_cols=27 Identities=41% Similarity=0.432 Sum_probs=16.1
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 029159 39 EEA-WKRYNRRMREEYEEEMERVERIRR 65 (198)
Q Consensus 39 ~~~-~~~~~~r~~~~~~~e~er~er~rr 65 (198)
+|| ||+=..|+.++.+...|..+|..+
T Consensus 138 eE~erKkdEeR~~eEae~k~ee~~Rkak 165 (299)
T KOG3054|consen 138 EEAERKKDEERLAEEAELKEEEKERKAK 165 (299)
T ss_pred HHHHHhhhHHHHHHHHHHhHHHHHHHHH
Confidence 556 877777777755544444444443
No 81
>KOG4538 consensus Predicted coiled-coil protein [General function prediction only]
Probab=25.52 E-value=2.4e+02 Score=22.30 Aligned_cols=27 Identities=26% Similarity=0.443 Sum_probs=14.7
Q ss_pred CCCcchhhHH----HHHHHHHHHHHHHHHHH
Q 029159 31 SSFRSSFQEE----AWKRYNRRMREEYEEEM 57 (198)
Q Consensus 31 ~~~~~~~~~~----~~~~~~~r~~~~~~~e~ 57 (198)
-++|+||+.. +=++|-++.+.+-++.+
T Consensus 41 k~lr~sw~kKm~lr~e~~~vK~~~~~i~ek~ 71 (130)
T KOG4538|consen 41 KTLRSSWDKKMELRAEKDMVKRVQDNIREKQ 71 (130)
T ss_pred hhhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888832 34455555555333333
No 82
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]
Probab=21.65 E-value=62 Score=28.95 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHccC
Q 029159 176 EAKFKEVMVSYEAIKQ 191 (198)
Q Consensus 176 ~e~Fk~In~AYevL~d 191 (198)
..++++||+|+++|+.
T Consensus 127 RRRLkKVNEAFE~LKR 142 (284)
T KOG3960|consen 127 RRRLKKVNEAFETLKR 142 (284)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4678999999999973
No 83
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=20.60 E-value=1.1e+02 Score=18.19 Aligned_cols=17 Identities=24% Similarity=0.520 Sum_probs=14.8
Q ss_pred CHHHHHHHHHHHHHHhC
Q 029159 148 TEAEIKTAFRAKAKEFH 164 (198)
Q Consensus 148 t~~eIKkAYRkLakk~H 164 (198)
..++.+.+-|+.++.||
T Consensus 9 ~~~~~r~~lR~AALeYH 25 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYH 25 (28)
T ss_pred chHHHHHHHHHHHHHhc
Confidence 45788999999999999
No 84
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=20.30 E-value=3.6e+02 Score=19.86 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=23.5
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHP 165 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HP 165 (198)
+--.++|++|.+ |..||+.|-++.+.+..-
T Consensus 4 NIk~LfnfdPPA----T~~EvrdAAlQfVRKlSG 33 (88)
T COG5552 4 NIKELFNFDPPA----TPVEVRDAALQFVRKLSG 33 (88)
T ss_pred chHHHhCCCCCC----CcHHHHHHHHHHHHHhcC
Confidence 344688999988 999999998877777643
Done!