Query 029159
Match_columns 198
No_of_seqs 236 out of 1798
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 13:37:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ej7_A HCG3 gene; HCG3 protein 99.8 3.3E-19 1.1E-23 128.1 7.4 64 129-196 7-70 (82)
2 2dmx_A DNAJ homolog subfamily 99.8 5.7E-19 1.9E-23 129.7 6.1 65 128-196 6-70 (92)
3 2yua_A Williams-beuren syndrom 99.8 1.9E-18 6.5E-23 128.8 8.6 67 125-196 11-77 (99)
4 2dn9_A DNAJ homolog subfamily 99.7 2E-18 6.8E-23 123.2 6.5 62 130-196 6-67 (79)
5 1iur_A KIAA0730 protein; DNAJ 99.7 2E-18 7E-23 127.1 6.7 68 124-195 9-76 (88)
6 2lgw_A DNAJ homolog subfamily 99.7 1.8E-18 6.3E-23 129.5 6.3 63 130-196 1-63 (99)
7 2ys8_A RAB-related GTP-binding 99.7 2.1E-18 7.1E-23 126.8 6.1 61 131-197 27-87 (90)
8 1wjz_A 1700030A21RIK protein; 99.7 3.3E-18 1.1E-22 125.6 6.5 66 127-196 12-82 (94)
9 2ctp_A DNAJ homolog subfamily 99.7 4.5E-18 1.5E-22 121.2 6.6 61 130-196 6-66 (78)
10 2ctr_A DNAJ homolog subfamily 99.7 5.7E-18 2E-22 123.6 7.1 61 130-196 6-66 (88)
11 2ctw_A DNAJ homolog subfamily 99.7 1.2E-17 4.2E-22 126.7 8.5 64 128-196 14-77 (109)
12 1hdj_A Human HSP40, HDJ-1; mol 99.7 6.7E-18 2.3E-22 120.0 6.2 60 131-196 3-62 (77)
13 2ctq_A DNAJ homolog subfamily 99.7 9E-18 3.1E-22 127.9 5.9 63 129-196 18-80 (112)
14 2och_A Hypothetical protein DN 99.7 1.9E-17 6.5E-22 116.7 6.6 58 131-196 8-65 (73)
15 2cug_A Mkiaa0962 protein; DNAJ 99.7 2.8E-17 9.7E-22 119.9 7.7 61 130-196 16-76 (88)
16 2o37_A Protein SIS1; HSP40, J- 99.7 6.5E-17 2.2E-21 119.0 6.7 59 130-196 7-65 (92)
17 1bq0_A DNAJ, HSP40; chaperone, 99.7 1.2E-17 4.1E-22 125.2 2.3 61 131-196 3-63 (103)
18 1faf_A Large T antigen; J doma 99.7 4.1E-17 1.4E-21 117.5 4.7 60 129-197 9-70 (79)
19 2guz_A Mitochondrial import in 99.7 7.4E-17 2.5E-21 113.8 5.9 61 127-196 10-71 (71)
20 2l6l_A DNAJ homolog subfamily 99.7 1.2E-16 4.2E-21 127.3 7.5 65 128-196 7-76 (155)
21 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 1.4E-16 5E-21 120.2 5.7 65 129-196 13-79 (109)
22 3apq_A DNAJ homolog subfamily 99.6 1.3E-16 4.3E-21 130.1 5.4 61 131-196 2-62 (210)
23 1gh6_A Large T antigen; tumor 99.6 5.3E-17 1.8E-21 124.8 1.3 59 130-197 7-67 (114)
24 2qwo_B Putative tyrosine-prote 99.6 1E-16 3.4E-21 119.3 1.8 57 131-191 33-91 (92)
25 3hho_A CO-chaperone protein HS 99.6 6.6E-16 2.3E-20 126.1 5.6 64 131-196 4-71 (174)
26 1fpo_A HSC20, chaperone protei 99.6 8.1E-16 2.8E-20 125.4 5.8 63 132-196 2-68 (171)
27 1n4c_A Auxilin; four helix bun 99.6 4.9E-16 1.7E-20 128.4 3.0 63 131-197 117-181 (182)
28 3ag7_A Putative uncharacterize 99.6 4.3E-16 1.5E-20 118.3 1.1 58 131-193 41-104 (106)
29 3bvo_A CO-chaperone protein HS 99.6 2.7E-15 9.3E-20 125.8 6.0 64 131-196 43-110 (207)
30 3lz8_A Putative chaperone DNAJ 99.5 4E-16 1.4E-20 138.8 0.0 65 127-197 24-88 (329)
31 2pf4_E Small T antigen; PP2A, 99.5 2E-15 7E-20 123.9 0.6 59 130-197 10-70 (174)
32 3uo3_A J-type CO-chaperone JAC 99.5 1.1E-14 3.8E-19 119.8 2.0 60 129-196 9-75 (181)
33 3apo_A DNAJ homolog subfamily 99.4 4.8E-14 1.6E-18 134.7 0.3 63 129-196 19-81 (780)
34 2guz_B Mitochondrial import in 99.1 2.2E-10 7.5E-15 79.9 5.8 55 129-192 2-59 (65)
35 2y4t_A DNAJ homolog subfamily 98.9 1.5E-09 5.3E-14 92.9 5.2 61 132-196 383-445 (450)
36 2pzi_A Probable serine/threoni 78.4 0.95 3.2E-05 42.3 2.4 44 132-188 630-675 (681)
37 2bn5_A PSI; nuclear protein, s 43.1 4.2 0.00014 24.3 -0.4 12 7-18 4-15 (33)
No 1
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=3.3e-19 Score=128.10 Aligned_cols=64 Identities=38% Similarity=0.606 Sum_probs=59.6
Q ss_pred ChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 129 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.+.++|+||||++++ +.++||+||++|++++|||++++..+.+.+.|+.|++||++|+||.+|.
T Consensus 7 ~~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 70 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQA----SSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70 (82)
T ss_dssp SSCCHHHHTTCCTTC----CHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHH
T ss_pred CCcCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 457899999999998 9999999999999999999998877789999999999999999999875
No 2
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=5.7e-19 Score=129.68 Aligned_cols=65 Identities=38% Similarity=0.611 Sum_probs=59.7
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..+.+||+||||++++ +.++||+||++|++++|||++++..+.++++|+.|++||++|+||.+|.
T Consensus 6 ~~~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 70 (92)
T 2dmx_A 6 SGMANYYEVLGVQASA----SPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRS 70 (92)
T ss_dssp CCCCCHHHHHTCCTTC----CTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCcCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 3457899999999998 9999999999999999999998776789999999999999999998874
No 3
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=1.9e-18 Score=128.83 Aligned_cols=67 Identities=28% Similarity=0.481 Sum_probs=59.8
Q ss_pred CCCCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 125 SESYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 125 ~~~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.......++|+||||++++ +.++||+||++|+++||||+++++. .+.++|+.|++||+||+||.+|.
T Consensus 11 ~~~~~~~~~Y~vLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~~L~d~~~R~ 77 (99)
T 2yua_A 11 DCSYSRTALYDLLGVPSTA----TQAQIKAAYYRQCFLYHPDRNSGSA-EAAERFTRISQAYVVLGSATLRR 77 (99)
T ss_dssp CCSSCSSHHHHHHTCCTTC----CHHHHHHHHHHHHHHSCTTTCSSCS-HHHHHHHHHHHHHHHTTSHHHHH
T ss_pred CCCCCccCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCH-HHHHHHHHHHHHHHHHCCHHHHH
Confidence 3345567999999999998 9999999999999999999997654 58899999999999999998875
No 4
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=123.17 Aligned_cols=62 Identities=34% Similarity=0.584 Sum_probs=56.9
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..++|+||||++++ +.++||++|++|++++|||++++++ .+.+.|+.|++||++|+||.+|.
T Consensus 6 ~~~~y~iLgv~~~a----~~~~Ik~ayr~l~~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~R~ 67 (79)
T 2dn9_A 6 SGDYYQILGVPRNA----SQKEIKKAYYQLAKKYHPDTNKDDP-KAKEKFSQLAEAYEVLSDEVKRK 67 (79)
T ss_dssp CSCHHHHHTCCTTC----CHHHHHHHHHHHHHHTCTTTCSSCT-THHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCH-HHHHHHHHHHHHHHHHCCHHHHH
Confidence 36899999999998 9999999999999999999998654 58899999999999999998875
No 5
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.74 E-value=2e-18 Score=127.13 Aligned_cols=68 Identities=22% Similarity=0.226 Sum_probs=60.8
Q ss_pred CCCCCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccc
Q 029159 124 ESESYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKD 195 (198)
Q Consensus 124 ~~~~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR 195 (198)
.....+..++|+||||++++ +.++||+|||+|+++||||+++++.+.|+++|+.|++||++|+++..|
T Consensus 9 ~~~~~~~~~~y~vLgv~~~a----s~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 9 VPRGSILKEVTSVVEQAWKL----PESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp CCSSSCHHHHHHHHHHTTSS----CSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCccHHHHHHHhCCCCCC----CHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 34456678999999999999 999999999999999999999988777999999999999999986543
No 6
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.74 E-value=1.8e-18 Score=129.49 Aligned_cols=63 Identities=41% Similarity=0.665 Sum_probs=58.7
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
|.|||+||||++++ +.++||+||++|++++|||++++..+.+.+.|+.|++||++|+||.+|.
T Consensus 1 M~d~Y~iLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~ 63 (99)
T 2lgw_A 1 MASYYEILDVPRSA----SADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63 (99)
T ss_dssp CCCHHHHSSSCTTS----CHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 35899999999998 9999999999999999999998876679999999999999999998874
No 7
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=2.1e-18 Score=126.83 Aligned_cols=61 Identities=25% Similarity=0.370 Sum_probs=56.4
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
.++|+||||++++ +.++||+|||+|+++||||++++. .+.+.|+.|++||++|+||.+|..
T Consensus 27 ~~~y~iLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 27 KDSWDMLGVKPGA----SRDEVNKAYRKLAVLLHPDKCVAP--GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp SSHHHHHTCCTTC----CHHHHHHHHHHHHHHHCTTTCCCT--THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCcccccC
Confidence 6899999999998 999999999999999999999763 578899999999999999998865
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.73 E-value=3.3e-18 Score=125.62 Aligned_cols=66 Identities=21% Similarity=0.376 Sum_probs=58.9
Q ss_pred CCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHHHccCccccc
Q 029159 127 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN-----KEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~-----~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.....++|+||||++++ +.++||+||++|++++|||+++.+ .+.+.+.|+.|++||+||+||.+|.
T Consensus 12 ~~~~~~~y~iLgv~~~a----s~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 82 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSA----NMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKK 82 (94)
T ss_dssp SSSCSCHHHHTTCCTTC----CHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHH
T ss_pred cCCCCChHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 34557999999999998 999999999999999999998742 3568999999999999999999885
No 9
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=4.5e-18 Score=121.20 Aligned_cols=61 Identities=30% Similarity=0.559 Sum_probs=56.4
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..++|+||||++++ +.++||+||++|++++|||+++. +.+.+.|+.|++||++|+||.+|.
T Consensus 6 ~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~ 66 (78)
T 2ctp_A 6 SGDYYEILGVSRGA----SDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRK 66 (78)
T ss_dssp SCCHHHHHTCCTTC----CHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHH
Confidence 46899999999998 99999999999999999999875 468899999999999999998875
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=5.7e-18 Score=123.62 Aligned_cols=61 Identities=34% Similarity=0.632 Sum_probs=56.4
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..+||+||||++++ +.++||+||++|++++|||+++. +.+.+.|+.|++||++|+||.+|.
T Consensus 6 ~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~ 66 (88)
T 2ctr_A 6 SGSYYDILGVPKSA----SERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRK 66 (88)
T ss_dssp CCSHHHHHTCCTTC----CHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHH
T ss_pred CCCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHH
Confidence 36899999999998 99999999999999999999984 468999999999999999998874
No 11
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=1.2e-17 Score=126.66 Aligned_cols=64 Identities=36% Similarity=0.510 Sum_probs=58.2
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
....++|+||||++++ +.++||+||++|++++|||++++++ .+.++|+.|++||+||+||.+|.
T Consensus 14 ~~~~~~Y~vLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~d~~~R~ 77 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNA----TSDDIKKSYRKLALKYHPDKNPDNP-EAADKFKEINNAHAILTDATKRN 77 (109)
T ss_dssp SCSCCHHHHHTCCTTC----CHHHHHHHHHHHHHHSCTTTSTTCH-HHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCcH-HHHHHHHHHHHHHHHHcCHHHHH
Confidence 3346899999999998 9999999999999999999998764 68899999999999999999875
No 12
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.72 E-value=6.7e-18 Score=120.02 Aligned_cols=60 Identities=40% Similarity=0.678 Sum_probs=55.3
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.++|+||||++++ +.++||+||++|++++|||++++. .+.+.|+.|++||++|+||.+|.
T Consensus 3 ~~~y~iLgv~~~a----s~~~Ik~ayr~l~~~~HPD~~~~~--~~~~~f~~i~~Ay~~L~d~~~R~ 62 (77)
T 1hdj_A 3 KDYYQTLGLARGA----SDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKRE 62 (77)
T ss_dssp CCSHHHHTCCTTC----CHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCHHHHH
Confidence 4799999999998 999999999999999999998763 47899999999999999998875
No 13
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=9e-18 Score=127.86 Aligned_cols=63 Identities=27% Similarity=0.460 Sum_probs=57.7
Q ss_pred ChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 129 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
+..|||+||||++++ +.++||+||++|++++|||++++++ .+.++|+.|++||+||+||.+|.
T Consensus 18 ~~~d~Y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~d~~~R~ 80 (112)
T 2ctq_A 18 DTEDYYTLLGCDELS----SVEQILAEFKVRALECHPDKHPENP-KAVETFQKLQKAKEILTNEESRA 80 (112)
T ss_dssp CCCCHHHHTTCCTTS----CHHHHHHHHHHHHHTTCTTTCTTCS-THHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCcH-HHHHHHHHHHHHHHHHCCHHHHH
Confidence 347899999999998 9999999999999999999998654 58899999999999999999875
No 14
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.70 E-value=1.9e-17 Score=116.69 Aligned_cols=58 Identities=34% Similarity=0.642 Sum_probs=53.9
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.++|+||||++++ +.++||++|++|++++|||++++. .+.|+.|++||++|+||.+|.
T Consensus 8 ~~~y~iLgl~~~a----~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~ 65 (73)
T 2och_A 8 TGYYDVLGVKPDA----SDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQ 65 (73)
T ss_dssp CCHHHHHTCCTTC----CHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHH
T ss_pred CCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHH
Confidence 5899999999998 999999999999999999999864 479999999999999999874
No 15
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=2.8e-17 Score=119.91 Aligned_cols=61 Identities=36% Similarity=0.635 Sum_probs=56.1
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..|||+||||++++ +.++||+||++|++++|||++++. .+.+.|+.|++||++|+||.+|.
T Consensus 16 ~~d~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~ 76 (88)
T 2cug_A 16 DFDPYRVLGVSRTA----SQADIKKAYKKLAREWHPDKNKDP--GAEDRFIQISKAYEILSNEEKRT 76 (88)
T ss_dssp SSCHHHHHTCCTTC----CHHHHHHHHHHHHHHSCTTTCCST--THHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCh--hHHHHHHHHHHHHHHHCCHHHHH
Confidence 36899999999998 999999999999999999999763 57899999999999999998874
No 16
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.67 E-value=6.5e-17 Score=119.00 Aligned_cols=59 Identities=31% Similarity=0.601 Sum_probs=54.3
Q ss_pred hhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 130 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..++|+||||++++ +.++||+||++|++++|||+++++ .+.|+.|++||++|+||.+|.
T Consensus 7 ~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~ 65 (92)
T 2o37_A 7 ETKLYDLLGVSPSA----NEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKRE 65 (92)
T ss_dssp CCHHHHHHTCCTTC----CHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHH
Confidence 36899999999998 999999999999999999999765 359999999999999998875
No 17
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.67 E-value=1.2e-17 Score=125.20 Aligned_cols=61 Identities=41% Similarity=0.738 Sum_probs=56.0
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.++|+||||++++ +.++||+||++|++++|||++++++ .++++|+.|++||++|+||.+|.
T Consensus 3 ~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~~L~d~~~R~ 63 (103)
T 1bq0_A 3 QDYYEILGVSKTA----EEREIRKAYKRLAMKYHPDRNQGDK-EAEAKFKEIKEAYEVLTDSQKRA 63 (103)
T ss_dssp CCSTTTTSSCSSC----CHHHHHHHHHHHHTTTCTTTCTTTC-THHHHHHHHTTTTTSTTCSHHHH
T ss_pred CCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCcH-HHHHHHHHHHHHHHHHCCHHHHH
Confidence 4799999999998 9999999999999999999997643 57899999999999999998875
No 18
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.66 E-value=4.1e-17 Score=117.49 Aligned_cols=60 Identities=18% Similarity=0.305 Sum_probs=53.8
Q ss_pred ChhhhhhhhCcCCC--CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 129 SLSHHYSVLGLDRL--RKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~--a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
+..++|+||||+++ + +.++||+|||+|++++|||++++ .++|++|++||++|+|+.+|..
T Consensus 9 ~~~~~y~iLgl~~~~~a----~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 9 DKERLLELLKLPRQLWG----DFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHHHTCCSSSTT----CHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHcCCCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH
Confidence 34689999999999 7 99999999999999999999864 4799999999999999987753
No 19
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.66 E-value=7.4e-17 Score=113.77 Aligned_cols=61 Identities=13% Similarity=0.153 Sum_probs=53.7
Q ss_pred CCChhhhhhhhCcCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 127 SYSLSHHYSVLGLDR-LRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~-~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
..+..++|+||||++ ++ +.++||+|||+|++++|||++++ .+.|++|++||++|+++..|.
T Consensus 10 ~m~~~~~y~iLgl~~~~a----~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 10 KMNSKEALQILNLTENTL----TKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp SCCHHHHHHHTTCCTTTC----CHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCHHHHHHHcCCCCCCC----CHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhcC
Confidence 455689999999998 68 99999999999999999999643 359999999999999987663
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=127.33 Aligned_cols=65 Identities=22% Similarity=0.392 Sum_probs=57.8
Q ss_pred CChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHHHccCccccc
Q 029159 128 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN-----KEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 128 ~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~-----~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
....|||+||||++++ +.++||+||++|++++|||++++. .+.|.+.|+.|++||++|+||.+|.
T Consensus 7 ~~~~~~y~iLgv~~~a----~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~ 76 (155)
T 2l6l_A 7 MPKKDWYSILGADPSA----NISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKR 76 (155)
T ss_dssp CCCSHHHHHHTCCTTC----CHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHC
T ss_pred CCCCChhHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3447999999999998 999999999999999999998654 2357899999999999999999885
No 21
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.64 E-value=1.4e-16 Score=120.24 Aligned_cols=65 Identities=29% Similarity=0.592 Sum_probs=57.5
Q ss_pred ChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHHHccCccccc
Q 029159 129 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQG--NKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~--~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
...++|+||||++++ ++.++||+||++|++++|||++++ ..+.+.+.|+.|++||++|+||.+|.
T Consensus 13 ~~~~~y~iLgv~~~a---~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~ 79 (109)
T 2qsa_A 13 GLENCYDVLEVNREE---FDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKT 79 (109)
T ss_dssp TTSCHHHHTTCCGGG---CCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHcCCCCCC---CCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 346899999999985 499999999999999999999875 23568999999999999999999874
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.64 E-value=1.3e-16 Score=130.13 Aligned_cols=61 Identities=33% Similarity=0.579 Sum_probs=56.6
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ +.++||+|||+|++++|||+++++. .+.++|+.|++||++|+||.+|.
T Consensus 2 ~~~y~~l~~~~~a----~~~~ik~ay~~l~~~~HPD~~~~~~-~~~~~f~~i~~Ay~~L~~~~~r~ 62 (210)
T 3apq_A 2 QNFYSLLGVSKTA----SSREIRQAFKKLALKLHPDKNPNNP-NAHGDFLKINRAYEVLKDEDLRK 62 (210)
T ss_dssp CCHHHHHTCCTTC----CHHHHHHHHHHHHHHHCGGGCTTCT-THHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCh-HHHHHHHHHHHHHHHhCCHHHHH
Confidence 5899999999998 9999999999999999999997654 58899999999999999999875
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.62 E-value=5.3e-17 Score=124.81 Aligned_cols=59 Identities=29% Similarity=0.442 Sum_probs=53.8
Q ss_pred hhhhhhhhCcCCCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 130 LSHHYSVLGLDRLRKAPYTE--AEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t~--~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
..++|+||||++++ +. ++||+|||+|++++|||++++ .++|++|++||+||+||.+|..
T Consensus 7 ~~~~Y~iLgv~~~a----s~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~ 67 (114)
T 1gh6_A 7 SLQLMDLLGLERSA----WGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAH 67 (114)
T ss_dssp HHHHHHHTTCCTTS----CSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCC
T ss_pred hhhHHHHcCCCCCC----CcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHH
Confidence 36899999999998 66 999999999999999999876 3699999999999999998864
No 24
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.61 E-value=1e-16 Score=119.30 Aligned_cols=57 Identities=19% Similarity=0.374 Sum_probs=51.5
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHHccC
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK--EAAEAKFKEVMVSYEAIKQ 191 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~--~~A~e~Fk~In~AYevL~d 191 (198)
.++|.+|||++.+ |.++||+|||+|+++||||+++++. ..|+++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~a----s~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLV----TPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSS----SHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 3689999999999 9999999999999999999988653 3589999999999999975
No 25
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.59 E-value=6.6e-16 Score=126.11 Aligned_cols=64 Identities=22% Similarity=0.346 Sum_probs=56.3
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKE----AAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~----~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ +++.++||++||+|+++||||++++..+ .|.+.|..|++||+||+||.+|.
T Consensus 4 ~d~Y~iLgl~~~a--~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 71 (174)
T 3hho_A 4 MNYFELFGLPIQF--ELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRA 71 (174)
T ss_dssp CCHHHHTTCCSSS--CCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCHHHHcCcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHH
Confidence 5899999999987 3459999999999999999999876532 37899999999999999999885
No 26
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.59 E-value=8.1e-16 Score=125.36 Aligned_cols=63 Identities=13% Similarity=0.286 Sum_probs=56.3
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHHHccCccccc
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK----EAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~----~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
|||+||||++++ .+|..+||++||+|+++||||++++.. ..|.+.|+.||+||+||+||.+|.
T Consensus 2 d~y~lLgl~~~a--~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 68 (171)
T 1fpo_A 2 DYFTLFGLPARY--QLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRA 68 (171)
T ss_dssp HHHHHTTCCSSS--CCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CHHHHCCCCCCC--CCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 799999999976 569999999999999999999987653 247789999999999999999884
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.57 E-value=4.9e-16 Score=128.43 Aligned_cols=63 Identities=19% Similarity=0.366 Sum_probs=56.8
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHHccCcccccC
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK--EAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~--~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
.++|+||||++.+ +.++||+|||+|++++|||++++.. ..|+++|+.|++||+||+||.+|..
T Consensus 117 ~d~Y~vLgv~~~A----s~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~ 181 (182)
T 1n4c_A 117 ETKWKPVGMADLV----TPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPL 181 (182)
T ss_dssp CCCCCCCCGGGGS----SHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred cchhhcCCCCCCC----CHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhh
Confidence 5799999999998 9999999999999999999987543 2389999999999999999998863
No 28
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.56 E-value=4.3e-16 Score=118.28 Aligned_cols=58 Identities=19% Similarity=0.222 Sum_probs=51.2
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C---hHHHHHHHHHHHHHHHHccCcc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQG---N---KEAAEAKFKEVMVSYEAIKQER 193 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~---~---~~~A~e~Fk~In~AYevL~dp~ 193 (198)
.|||.|||++. + |.++||+|||+|++++|||++++ + ...|+++|+.|++||++|+|+.
T Consensus 41 ~d~Y~vl~~~~-A----s~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-I----EGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-C----SHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-C----CHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 58999999996 7 99999999999999999999753 2 2257899999999999999985
No 29
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.56 E-value=2.7e-15 Score=125.82 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=56.0
Q ss_pred hhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHHHccCccccc
Q 029159 131 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK----EAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 131 ~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~----~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.|||+||||++++ .++.++||++||+|++++|||++++.. ..|.++|+.||+||+||+||.+|.
T Consensus 43 ~d~y~lLgv~~~~--~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~ 110 (207)
T 3bvo_A 43 RDYFSLMDCNRSF--RVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG 110 (207)
T ss_dssp CCHHHHTTSCSCS--CCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 5899999999864 349999999999999999999987542 347889999999999999999884
No 30
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.55 E-value=4e-16 Score=138.81 Aligned_cols=65 Identities=35% Similarity=0.629 Sum_probs=0.0
Q ss_pred CCChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 127 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 127 ~~~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
.++..|||+||||++++ +.++||+|||+|+++||||++++. .|+++|++|++||++|+||.+|..
T Consensus 24 ~m~~~d~Y~vLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~ 88 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTD----DLKTIKTAYRRLARKYHPDVSKEN--DAEAKFKDLAEAWEVLKDEQRRAE 88 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCCCCCCCh--HHHHHHHHHHHHHHHhhhhhhhcc
Confidence 34557999999999998 999999999999999999998753 688999999999999999998863
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.50 E-value=2e-15 Score=123.89 Aligned_cols=59 Identities=29% Similarity=0.432 Sum_probs=50.8
Q ss_pred hhhhhhhhCcCCCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCcccccC
Q 029159 130 LSHHYSVLGLDRLRKAPYT--EAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 197 (198)
Q Consensus 130 ~~d~Y~ILGL~~~a~~~~t--~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~~ 197 (198)
..++|+||||++++ + .++||+|||+|++++|||++++ .++|++|++||++|+||.+|..
T Consensus 10 ~~d~Y~vLGl~~~a----s~~~~eIKkAYRkLa~~~HPDk~~~-----~e~F~~I~~AYevLsdp~kR~~ 70 (174)
T 2pf4_E 10 SLQLMDLLGLERSA----WGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAH 70 (174)
T ss_dssp HHHHHHTTTCCGGG----TTCHHHHHHHHHHHGGGCSCC---C-----CTTTTHHHHHHHHHHHHHHHHT
T ss_pred cccHHHHcCCCCCC----CcCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHhCCHHHHHH
Confidence 36899999999998 6 7999999999999999999876 3689999999999999998863
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.46 E-value=1.1e-14 Score=119.84 Aligned_cols=60 Identities=17% Similarity=0.300 Sum_probs=52.8
Q ss_pred ChhhhhhhhC------cCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 129 SLSHHYSVLG------LDR-LRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 129 ~~~d~Y~ILG------L~~-~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
.+.|||+||| +++ ++ |.++||++||+|++++|||++++ +.+.|+.|++||+||+||.+|.
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a----~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~ 75 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTI----DQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRS 75 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCC----CHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCC----CHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHH
Confidence 4579999994 654 45 99999999999999999999986 5679999999999999999885
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.37 E-value=4.8e-14 Score=134.70 Aligned_cols=63 Identities=32% Similarity=0.538 Sum_probs=34.8
Q ss_pred ChhhhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCccccc
Q 029159 129 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
...|||+||||++++ +.++||+|||+|++++|||++++++ .|.++|+.|++||++|+||.+|.
T Consensus 19 ~~~~~y~~lg~~~~a----~~~~i~~ay~~l~~~~hpd~~~~~~-~~~~~f~~i~~ay~~L~~~~~r~ 81 (780)
T 3apo_A 19 HDQNFYSLLGVSKTA----SSREIRQAFKKLALKLHPDKNPNNP-NAHGDFLKINRAYEVLKDEDLRK 81 (780)
T ss_dssp ----CHHHHTCCTTC----CHHHHHHHHCC------------------------CTHHHHHHSHHHHH
T ss_pred CCCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCh-HHHHHHHHHHHHHHHHcChHHHH
Confidence 346899999999999 9999999999999999999997654 58899999999999999999885
No 34
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.2e-10 Score=79.95 Aligned_cols=55 Identities=15% Similarity=0.125 Sum_probs=47.5
Q ss_pred ChhhhhhhhCcCCC---CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHccCc
Q 029159 129 SLSHHYSVLGLDRL---RKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQE 192 (198)
Q Consensus 129 ~~~d~Y~ILGL~~~---a~~~~t~~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYevL~dp 192 (198)
+..++|.||||+++ + +.++|+++||+|+..+|||++++ .-...+|+.|.++|...
T Consensus 2 t~~EA~~ILgv~~~~~~a----~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 2 TLDESCKILNIEESKGDL----NMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp CHHHHHHHTTCCGGGTCC----SHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCcCcC----CHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence 45689999999998 7 99999999999999999999765 34667899999998754
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.87 E-value=1.5e-09 Score=92.89 Aligned_cols=61 Identities=30% Similarity=0.489 Sum_probs=55.7
Q ss_pred hhhhhhCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHHccCccccc
Q 029159 132 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK--EAAEAKFKEVMVSYEAIKQERKDM 196 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~~eIKkAYRkLakk~HPDk~~~~~--~~A~e~Fk~In~AYevL~dp~kR~ 196 (198)
++|.+||+...+ +.++|+++|+++++++|||+.+++. +.++++|+.|++||++|+||.+|.
T Consensus 383 ~~y~~lg~~~~~----~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~ 445 (450)
T 2y4t_A 383 DYYKILGVKRNA----KKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRK 445 (450)
T ss_dssp CSGGGSCSSTTC----CTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-
T ss_pred hHHHHhCCCccC----CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 789999999998 8899999999999999999997653 568999999999999999999985
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=78.36 E-value=0.95 Score=42.27 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=32.7
Q ss_pred hhhhhhCcCCCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHH
Q 029159 132 HHYSVLGLDRLRKAPYTE--AEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEA 188 (198)
Q Consensus 132 d~Y~ILGL~~~a~~~~t~--~eIKkAYRkLakk~HPDk~~~~~~~A~e~Fk~In~AYev 188 (198)
++|.|||++... .. .+|+++||+|++..+++ .+++..|..|..|
T Consensus 630 ~~~~~lG~~~~~----~~lr~~~~~ayr~la~~~~~~---------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 630 STNHILGFPFTS----HGLRLGVEASLRSLARVAPTQ---------RHRYTLVDMANKV 675 (681)
T ss_dssp SSSEETTEESSH----HHHHHHHHHHHHHHHHHCSSH---------HHHHHHHHHHHHH
T ss_pred CCcccCCCCCCh----HHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHhccc
Confidence 378999996654 33 56999999999976554 3577778777765
No 37
>2bn5_A PSI; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster} PDB: 2bn6_A
Probab=43.08 E-value=4.2 Score=24.27 Aligned_cols=12 Identities=50% Similarity=1.126 Sum_probs=7.4
Q ss_pred CCCchhhhhhhh
Q 029159 7 YSNGWIEYFVSL 18 (198)
Q Consensus 7 ~~~~~~~~~~~~ 18 (198)
||--||.||.++
T Consensus 4 YSaQW~eYYrsi 15 (33)
T 2bn5_A 4 YSAQWAEYYRSV 15 (33)
T ss_dssp THHHHHHHHHHH
T ss_pred hHHHHHHHHHHc
Confidence 555666666665
Done!