Query 029164
Match_columns 198
No_of_seqs 113 out of 1156
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 13:45:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029164.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029164hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lck_A Mitochondrial uncouplin 100.0 9.5E-40 3.2E-44 258.0 9.6 170 1-192 121-290 (303)
2 2lck_A Mitochondrial uncouplin 100.0 1.8E-37 6.3E-42 244.9 11.2 172 1-191 18-195 (303)
3 1okc_A ADP, ATP carrier protei 100.0 5.9E-37 2E-41 241.3 12.8 173 1-190 24-203 (297)
4 1okc_A ADP, ATP carrier protei 100.0 1.6E-37 5.5E-42 244.6 9.0 168 1-188 129-297 (297)
5 2acm_A Mucin-1; auto-catalytic 31.2 8 0.00027 21.9 -0.4 21 25-45 40-60 (66)
6 3tgu_G UQCRQ, mitochondrial ub 29.7 18 0.00062 21.9 1.0 37 154-190 32-68 (81)
7 2a3d_A Protein (de novo three- 22.6 1.1E+02 0.0037 17.0 3.5 39 5-48 11-49 (73)
8 1pp9_G Ubiquinol-cytochrome C 19.5 40 0.0014 20.4 1.1 37 154-190 32-68 (81)
9 1y9i_A Low temperature require 18.1 88 0.003 22.0 2.7 42 56-97 111-157 (178)
10 3fbl_A Putative uncharacterize 17.4 30 0.001 19.7 0.1 28 142-169 3-34 (82)
No 1
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=9.5e-40 Score=258.01 Aligned_cols=170 Identities=19% Similarity=0.283 Sum_probs=154.2
Q ss_pred CCCchhHHHHHhhccccccCCCCCCCHHHHHHHHHHhhhhhhhccccchhhhhhccchhhHHHHHHHHHHHHHhcCCCCC
Q 029164 1 MMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLG 80 (198)
Q Consensus 1 l~~Pld~iktr~q~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 80 (198)
+++|+|++|+|+|++........|++.++++++|+++||++|||+|+.|++++.++..+++|.+||.+|+.+.+......
T Consensus 121 ~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~ 200 (303)
T 2lck_A 121 VAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTD 200 (303)
T ss_dssp HSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCS
T ss_pred HcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 47999999999999864334557899999999999999999999999999999999999999999999998876554455
Q ss_pred ChHHHHHHHHHHhhhhheeeecHHHHHHHHHhccccccccccccccccccccccccccCCCcHHHHHHHHHHhhchhhhc
Q 029164 81 GHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLY 160 (198)
Q Consensus 81 ~~~~~~~a~~~ag~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~~~~G~~gl~ 160 (198)
+.+..+++|++||+++.++++|+|+||+|+|.+... .|.++++|+++|+++||++|||
T Consensus 201 ~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~----------------------~y~~~~~~~~~i~~~eG~~gly 258 (303)
T 2lck_A 201 DLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALG----------------------QYHSAGHCALTMLRKEGPRAFY 258 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSS----------------------SCCSHHHHHHHHHHSSCTHHHH
T ss_pred chHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcccc----------------------ccCCHHHHHHHHHHHcChHHhh
Confidence 677889999999999999999999999999997532 4899999999999999999999
Q ss_pred cccchhhccccCchhHHHHHHHHHHHhhhhhh
Q 029164 161 AGYWSTLARDVPFAGLMVCYFCCLILYFPNFL 192 (198)
Q Consensus 161 rG~~~~~~r~~~~~~i~~~~y~~~~~~~~~~~ 192 (198)
||+.|+++|.+|.++++|.+||.+++.+.+..
T Consensus 259 rG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~ 290 (303)
T 2lck_A 259 KGFMPSFLRLGSWNVVMFVTYEQLKRALMAAY 290 (303)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHH
T ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999887654
No 2
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=1.8e-37 Score=244.92 Aligned_cols=172 Identities=23% Similarity=0.347 Sum_probs=152.5
Q ss_pred CCCchhHHHHHhhcccccc------CCCCCCCHHHHHHHHHHhhhhhhhccccchhhhhhccchhhHHHHHHHHHHHHHh
Q 029164 1 MMHPVDTVKTRIQSQAILS------GSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEE 74 (198)
Q Consensus 1 l~~Pld~iktr~q~~~~~~------~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 74 (198)
+++|+|++|+|+|++.... ....|++.++++++|+++||++|||+|+.+++++.++..+++|++||.+|+.+.+
T Consensus 18 ~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~ 97 (303)
T 2lck_A 18 ITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTK 97 (303)
T ss_dssp TTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSC
T ss_pred HcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5799999999999986321 1346899999999999999999999999999999999999999999999998876
Q ss_pred cCCCCCChHHHHHHHHHHhhhhheeeecHHHHHHHHHhccccccccccccccccccccccccccCCCcHHHHHHHHHHhh
Q 029164 75 SHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQ 154 (198)
Q Consensus 75 ~~~~~~~~~~~~~a~~~ag~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~~~~ 154 (198)
..+ ..+.+..+++|++||+++.++++|+|+||+|+|++..... ...|.+.++++++|+++|
T Consensus 98 ~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~------------------~~~~~~~~~~~~~i~~~e 158 (303)
T 2lck_A 98 GSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGG------------------GRRYQSTVEAYKTIAREE 158 (303)
T ss_dssp CCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCC------------------SSSCCCHHHHHHHHHHHH
T ss_pred CCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCC------------------CCCCCCHHHHHHHHHHhc
Confidence 422 3567889999999999999999999999999999864210 135899999999999999
Q ss_pred chhhhccccchhhccccCchhHHHHHHHHHHHhhhhh
Q 029164 155 GLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNF 191 (198)
Q Consensus 155 G~~gl~rG~~~~~~r~~~~~~i~~~~y~~~~~~~~~~ 191 (198)
|++|||||+.++++|.+|.++++|.+||.+++.+.+.
T Consensus 159 G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~ 195 (303)
T 2lck_A 159 GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKA 195 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999988653
No 3
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=5.9e-37 Score=241.34 Aligned_cols=173 Identities=18% Similarity=0.268 Sum_probs=148.3
Q ss_pred CCCchhHHHHHhhcccccc---CCCCCCCHHHHHHHHHHhhhhhhhccccchhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 029164 1 MMHPVDTVKTRIQSQAILS---GSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHP 77 (198)
Q Consensus 1 l~~Pld~iktr~q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 77 (198)
+++|+|++|||+|++.... ....|+++++++++|+++||++|||||+.+++++.++..+++|++||.+|+.+....+
T Consensus 24 ~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~ 103 (297)
T 1okc_A 24 AVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD 103 (297)
T ss_dssp HTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 4799999999999986321 2346899999999999999999999999999999999999999999999996543222
Q ss_pred CCC----ChHHHHHHHHHHhhhhheeeecHHHHHHHHHhccccccccccccccccccccccccccCCCcHHHHHHHHHHh
Q 029164 78 SLG----GHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWRE 153 (198)
Q Consensus 78 ~~~----~~~~~~~a~~~ag~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~~~ 153 (198)
... ..+..+++|++||+++.++++|+|+||+|+|++..... ....|.+.++++++|+++
T Consensus 104 ~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~-----------------~~~~~~~~~~~~~~i~~~ 166 (297)
T 1okc_A 104 RHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA-----------------AQREFTGLGNCITKIFKS 166 (297)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST-----------------TTCSCSSHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCC-----------------cCcCCCCHHHHHHHHHHh
Confidence 211 23568899999999999999999999999999753211 113589999999999999
Q ss_pred hchhhhccccchhhccccCchhHHHHHHHHHHHhhhh
Q 029164 154 QGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPN 190 (198)
Q Consensus 154 ~G~~gl~rG~~~~~~r~~~~~~i~~~~y~~~~~~~~~ 190 (198)
||++|||||+.++++|.+|.++++|.+||.+++.+.+
T Consensus 167 eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~ 203 (297)
T 1okc_A 167 DGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD 203 (297)
T ss_dssp HCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG
T ss_pred ccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999998764
No 4
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=1.6e-37 Score=244.60 Aligned_cols=168 Identities=20% Similarity=0.400 Sum_probs=142.6
Q ss_pred CCCchhHHHHHhhcccccc-CCCCCCCHHHHHHHHHHhhhhhhhccccchhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 029164 1 MMHPVDTVKTRIQSQAILS-GSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSL 79 (198)
Q Consensus 1 l~~Pld~iktr~q~~~~~~-~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 79 (198)
+++|+|++|+|+|++.... ....|++.++++++|+++||++|||+|+.|++++.++..+++|.+||.+|+.+.+.. .
T Consensus 129 ~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~--~ 206 (297)
T 1okc_A 129 FVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--N 206 (297)
T ss_dssp HHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--C
T ss_pred HhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC--C
Confidence 3689999999999975322 245689999999999999999999999999999999999999999999999775532 2
Q ss_pred CChHHHHHHHHHHhhhhheeeecHHHHHHHHHhccccccccccccccccccccccccccCCCcHHHHHHHHHHhhchhhh
Q 029164 80 GGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGL 159 (198)
Q Consensus 80 ~~~~~~~~a~~~ag~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~~~~G~~gl 159 (198)
.+.+..+++|++||+++.++++|+|+||+|+|++..... ....|.++++|+++|+++||++||
T Consensus 207 ~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~~~-----------------~~~~y~~~~~~~~~i~~~eG~~gl 269 (297)
T 1okc_A 207 VHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG-----------------ADIMYTGTVDCWRKIAKDEGPKAF 269 (297)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCG-----------------GGCSCSSHHHHHHHHHHHHCGGGG
T ss_pred ccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCCC-----------------CCCCCCCHHHHHHHHHHHcCcCeE
Confidence 456778999999999999999999999999998753211 113699999999999999999999
Q ss_pred ccccchhhccccCchhHHHHHHHHHHHhh
Q 029164 160 YAGYWSTLARDVPFAGLMVCYFCCLILYF 188 (198)
Q Consensus 160 ~rG~~~~~~r~~~~~~i~~~~y~~~~~~~ 188 (198)
|||+.|+++|. +.++++|.+||.+++.+
T Consensus 270 yrG~~~~~~r~-~~~~~~f~~ye~~k~~l 297 (297)
T 1okc_A 270 FKGAWSNVLRG-MGGAFVLVLYDEIKKFV 297 (297)
T ss_dssp GTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred ecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence 99999999996 47799999999988753
No 5
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=31.17 E-value=8 Score=21.90 Aligned_cols=21 Identities=24% Similarity=0.534 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHhhhhhhhcc
Q 029164 25 KSISQMVRSVWAADGLRGFYR 45 (198)
Q Consensus 25 ~~~~~~~~~i~~~~G~~gly~ 45 (198)
+++.+.+.+|++++++.||+.
T Consensus 40 r~is~L~lqIykq~~FLgl~~ 60 (66)
T 2acm_A 40 RDISEMFLQIYKQGGFLGLSN 60 (66)
T ss_dssp HHHHHHHHHHCTTTTEEEEEE
T ss_pred HHHHHHHHHHHccCCeeeeeE
Confidence 567888999999999998863
No 6
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=29.73 E-value=18 Score=21.94 Aligned_cols=37 Identities=11% Similarity=0.036 Sum_probs=29.9
Q ss_pred hchhhhccccchhhccccCchhHHHHHHHHHHHhhhh
Q 029164 154 QGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPN 190 (198)
Q Consensus 154 ~G~~gl~rG~~~~~~r~~~~~~i~~~~y~~~~~~~~~ 190 (198)
.|+--.+|-+..+++..+|..++.+.+|++.++....
T Consensus 32 ~~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~ 68 (81)
T 3tgu_G 32 DALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFER 68 (81)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHH
Confidence 5555667777788888999999999999999887644
No 7
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=22.63 E-value=1.1e+02 Score=16.98 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=21.1
Q ss_pred hhHHHHHhhccccccCCCCCCCHHHHHHHHHHhhhhhhhccccc
Q 029164 5 VDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVT 48 (198)
Q Consensus 5 ld~iktr~q~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~ 48 (198)
+..||||+|+-.. .-..+...-++|..-|.-..-|+|-.
T Consensus 11 laaiktrlqalgg-----seaelaafekeiaafeselqaykgkg 49 (73)
T 2a3d_A 11 LAAIKTRLQALGG-----SEAELAAFEKEIAAFESELQAYKGKG 49 (73)
T ss_dssp HHHHHHHHHHCSS-----GGGTHHHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHhcC-----cHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 5578999998542 12233333444554455455566543
No 8
>1pp9_G Ubiquinol-cytochrome C reductase complex ubiquino protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.23.13.1 PDB: 1bgy_G* 1be3_G* 1l0n_G* 1ntk_G* 1ntm_G* 1ntz_G* 1nu1_G* 1l0l_G* 1ppj_G* 1sqb_G* 1sqp_G* 1sqq_G* 1sqv_G* 1sqx_G* 2a06_G* 2fyu_G* 2ybb_G* 1bcc_G* 2bcc_G* 3bcc_G* ...
Probab=19.49 E-value=40 Score=20.39 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=29.2
Q ss_pred hchhhhccccchhhccccCchhHHHHHHHHHHHhhhh
Q 029164 154 QGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPN 190 (198)
Q Consensus 154 ~G~~gl~rG~~~~~~r~~~~~~i~~~~y~~~~~~~~~ 190 (198)
+|+--.+|-+..+++..+|...+.+.+|++.++....
T Consensus 32 ~~i~n~~RR~~~~~l~v~pPfv~~Y~i~~Wa~~~~e~ 68 (81)
T 1pp9_G 32 KGIPNVLRRTRACILRVAPPFVAFYLVYTWGTQEFEK 68 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhcceeeehhHHHHHHHHHHHHHHHHH
Confidence 5666667777777788889999999999998876543
No 9
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=18.15 E-value=88 Score=21.99 Aligned_cols=42 Identities=14% Similarity=0.244 Sum_probs=26.1
Q ss_pred cchhhHHHHHHHHHHHHHhcCC-----CCCChHHHHHHHHHHhhhhh
Q 029164 56 ATGATYFGFIESTKKWIEESHP-----SLGGHWAHFIAGAVGDTLGS 97 (198)
Q Consensus 56 ~~~~~~f~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~ag~~~~ 97 (198)
....+.|..||..|...-..-+ ........++||..|+++..
T Consensus 111 ~~gf~~Fr~fDi~KPgpI~~ld~~~~gg~gimlDDivAgi~A~~~~~ 157 (178)
T 1y9i_A 111 SIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASR 157 (178)
T ss_dssp GGGHHHHHHHHHHCCTHHHHTTCCCSSCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccchhHHhhhcccCCCCcchHHHHHHHHHHHHHHH
Confidence 3556778888988864432222 22346678888887777553
No 10
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=17.36 E-value=30 Score=19.73 Aligned_cols=28 Identities=21% Similarity=0.421 Sum_probs=18.4
Q ss_pred cHHHHHHHHHHhhchh----hhccccchhhcc
Q 029164 142 GIYQAGSSIWREQGLR----GLYAGYWSTLAR 169 (198)
Q Consensus 142 ~~~~~~~~i~~~~G~~----gl~rG~~~~~~r 169 (198)
.++-.+++|.+.+|+- |+|-.++-.+++
T Consensus 3 klrlaikeicktdgipnikwgmyiafgekllk 34 (82)
T 3fbl_A 3 KLRLAIKEICKTDGIPNIKWGMYIAFGEKLLK 34 (82)
T ss_dssp HHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHccCCCCcchhHHHHHHHHHHHH
Confidence 4566788999999963 455555555544
Done!