Query 029165
Match_columns 198
No_of_seqs 120 out of 240
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 08:32:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029165.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029165hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13862 BCIP: p21-C-terminal 100.0 1.1E-54 2.3E-59 365.2 16.2 145 52-196 1-148 (194)
2 KOG3034 Isoamyl acetate-hydrol 100.0 5.6E-52 1.2E-56 365.5 16.9 192 5-196 2-210 (308)
3 PF02228 Gag_p19: Major core p 80.2 1.8 3.9E-05 32.6 2.8 33 63-95 38-74 (92)
4 COG0838 NuoA NADH:ubiquinone o 58.6 4.9 0.00011 32.1 1.1 18 2-19 34-51 (123)
5 PF06478 Corona_RPol_N: Corona 49.7 9.5 0.00021 35.3 1.5 43 59-101 149-192 (355)
6 PRK11593 folB bifunctional dih 30.8 1.9E+02 0.004 22.0 5.9 33 67-99 52-89 (119)
7 cd04596 CBS_pair_DRTGG_assoc T 24.4 1.1E+02 0.0025 21.3 3.5 78 84-168 11-92 (108)
8 PF10305 Fmp27_SW: RNA pol II 23.3 64 0.0014 24.6 2.1 61 128-192 12-72 (103)
9 PF06597 Clostridium_P47: Clos 22.7 1.6E+02 0.0036 28.2 5.1 28 52-79 124-153 (456)
10 PF02799 NMT_C: Myristoyl-CoA: 22.6 1.4E+02 0.0031 25.5 4.2 58 60-119 31-93 (190)
11 PF02152 FolB: Dihydroneopteri 22.2 1.4E+02 0.0031 22.2 3.8 37 62-98 43-85 (113)
12 KOG3375 Phosphoprotein/predict 21.9 44 0.00095 28.0 0.9 23 28-50 44-67 (174)
No 1
>PF13862 BCIP: p21-C-terminal region-binding protein
Probab=100.00 E-value=1.1e-54 Score=365.22 Aligned_cols=145 Identities=46% Similarity=0.846 Sum_probs=137.7
Q ss_pred ceEEEEEeecCCCCCcHHHHHHHHHHhhccCCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeeCCccCCchhH
Q 029165 52 GVVQADFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCI 131 (198)
Q Consensus 52 e~V~VDFeffdp~~~DfhgIK~LL~qlf~~~~~dlseLaDlIi~Q~~vGTvIK~~~ded~dvfg~~SvLNL~~~k~~~~i 131 (198)
|+|||||+||||++.||||||+||+|||+++.||+++|||+|++|++||||||++|+++++||||+|||||++|++++|+
T Consensus 1 e~V~vdFe~~dp~~~D~hgIk~LL~ql~~~~~~dl~~LadlIi~Q~~vGsvVK~~d~~e~dvyg~~Svlnl~~~k~~~~i 80 (194)
T PF13862_consen 1 EEVNVDFEFFDPNEIDFHGIKNLLQQLFLDAEIDLSELADLIIEQNNVGSVVKQADGDEDDVYGFLSVLNLTQHKDHPCI 80 (194)
T ss_pred CeEEEEEEeeCCChhhHHHHHHHHHHhccccCcCHHHHHHHHHcCCCCceEEEecCCCCCcceEEEEEEEcccccccHHH
Confidence 47999999999999999999999999999999999999999999999999999954456799999999999999999999
Q ss_pred HHHHHHHHHhcc---cchhHHHHHHHhcCCCCceEEEeecccccCCccchHHHHHHHHHHHHHhhhcc
Q 029165 132 KELKEFLLKVCQ---EKDVIRDLRLLMGEQAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDE 196 (198)
Q Consensus 132 ~~L~~yLl~~~~---~~~~~~~L~~lL~~~~~~vGLlinER~iN~P~ql~ppL~~~L~eEI~wA~ede 196 (198)
++|++||+++|+ .+++.+.|+++|++++++|||||||||+|||+||+||||++|++||+||.+++
T Consensus 81 ~~l~~yl~~k~~~~~~~~~~~~l~~~l~~~~~~vGLlinER~iN~P~ql~ppl~~~L~~ei~~a~~~~ 148 (194)
T PF13862_consen 81 KQLRKYLLSKCSKSADKEVKKKLEKLLSSSNKNVGLLINERFINIPPQLAPPLYKMLLEEIEWAQEDE 148 (194)
T ss_pred HHHHHHHHHHhhhccChhHHHHHHHHHhccCCCeEEEEehhhhcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999886 56788999999998889999999999999999999999999999999999875
No 2
>KOG3034 consensus Isoamyl acetate-hydrolyzing esterase and related enzymes [General function prediction only]
Probab=100.00 E-value=5.6e-52 Score=365.52 Aligned_cols=192 Identities=36% Similarity=0.613 Sum_probs=174.7
Q ss_pred CCccchhhhcccCCCCCCCCCCCCCCCccccCCCCCCCCCCc------CCCCCceEEEEEeecCCCCCcHHHHHHHHHHh
Q 029165 5 PTRDKRRTYKSKDQKGFPLSSKDKGIPKHTLEGKSDLSGSSE------EEGSEGVVQADFVFFDPKPDDFHGVKILLQTY 78 (198)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~sd------de~~~e~V~VDFeffdp~~~DfhgIK~LL~ql 78 (198)
++|+|||++.|+.++.+-++.+|.-.++.+++.+.+++|++| ++..+++||+|||||+|++.||||||+||+|+
T Consensus 2 ~~~~~~~~~~s~~k~~~l~~~~r~~~e~~~v~~~~edddD~d~~~eeek~~e~e~vnidFE~~~p~d~D~~giknLL~Ql 81 (308)
T KOG3034|consen 2 ASRSKRRAVESKYKQLPLPPFQRDEEEEEDVEDESEDDDDEDKENEEEKEVEDEEVNIDFEAYSPSDVDADGIKNLLQQL 81 (308)
T ss_pred CCcccchhhhhcCCCCCCcchhccccccccccccccCcccccccchhhhccccceEeccccccCCCCcchHHHHHHHHHH
Confidence 578999999999999999999999999888887765543322 22346789999999999999999999999999
Q ss_pred hccCCCChhhHHHHHHcCCCcceEEEecCCC-------CCCceEEEEeeeCCccCCchhHHHHHHHHHHhcc---cchhH
Q 029165 79 LDDTQWDLSGFVDLILAQTTVGTVVKMEGDD-------DDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQ---EKDVI 148 (198)
Q Consensus 79 f~~~~~dlseLaDlIi~Q~~vGTvIK~~~de-------d~dvfg~~SvLNL~~~k~~~~i~~L~~yLl~~~~---~~~~~ 148 (198)
|.++++|+++|||+||.|+.+|+|||+++++ .+|+|||+|+||++..+..+||++|.+|+++.|+ .+.+.
T Consensus 82 fl~~~Vnla~laDlii~q~~~gsvikq~~~~e~~~d~m~~D~~~~~s~lnl~~~~~~~~ikqL~~yvL~r~~k~~~k~v~ 161 (308)
T KOG3034|consen 82 FLRAHVNLAALADLIIAQNHIGSVIKQDDDSETENDDMDEDPFGFLSFLNLTARKDTKCIKQLQEYVLRRCKKNAEKEVV 161 (308)
T ss_pred hccccccHHHhHHHHhhcccccceeEecccccccccccccCCceEEEEeehhhhccchHHHHHHHHHHHHHhhcCCHHHH
Confidence 9999999999999999999999999999854 1578999999999999999999999999999887 56799
Q ss_pred HHHHHHhcCCCCceEEEeecccccCCccchHHHHHHHHHHHHHhh-hcc
Q 029165 149 RDLRLLMGEQAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWAT-EDE 196 (198)
Q Consensus 149 ~~L~~lL~~~~~~vGLlinER~iN~P~ql~ppL~~~L~eEI~wA~-ede 196 (198)
+.|+.++.+++++|||||||||||||+||+||||++|++||+||. +++
T Consensus 162 ~~lk~ll~s~~k~vgLlvsERliN~P~qv~pPly~~l~eEla~A~~~~k 210 (308)
T KOG3034|consen 162 EQLKLLLDSGTKPVGLLVSERLINMPPQVVPPLYQSLQEELAGAHRENK 210 (308)
T ss_pred HHHHHHHhcCCCceeEEeehhhhcCCchhhhHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999999999999999999 554
No 3
>PF02228 Gag_p19: Major core protein p19; InterPro: IPR003139 Retroviral matrix proteins (or major core proteins) are components of envelope-associated capsids, which line the inner surface of virus envelopes and are associated with viral membranes []. Matrix proteins are produced as part of Gag precursor polyproteins. During viral maturation, the Gag polyprotein is cleaved into major structural proteins by the viral protease, yielding the matrix (MA), capsid (CA), nucleocapsid (NC), and some smaller peptides. Gag-derived proteins govern the entire assembly and release of the virus particles, with matrix proteins playing key roles in Gag stability, capsid assembly, transport and budding. Although matrix proteins from different retroviruses appear to perform similar functions and can have similar structural folds, their primary sequences can be very different. This entry represents matrix proteins from delta-retroviruses such as Human T-lymphotropic virus 1 and Human T-cell leukemia virus 2 (HTLV-2), both members of the human oncovirus subclass of retroviruses [, ].; GO: 0005198 structural molecule activity, 0019013 viral nucleocapsid; PDB: 1JVR_A.
Probab=80.21 E-value=1.8 Score=32.58 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=24.4
Q ss_pred CCCCcHHHHHHHHHHhhcc----CCCChhhHHHHHHc
Q 029165 63 PKPDDFHGVKILLQTYLDD----TQWDLSGFVDLILA 95 (198)
Q Consensus 63 p~~~DfhgIK~LL~qlf~~----~~~dlseLaDlIi~ 95 (198)
|++-|||-+|++|.-.+.. +.+|.|-||.+|-.
T Consensus 38 PS~~DF~qLr~flk~alkTpvwl~pi~yslla~lipk 74 (92)
T PF02228_consen 38 PSSFDFHQLRNFLKLALKTPVWLNPINYSLLASLIPK 74 (92)
T ss_dssp -STTTHHHHHHHHHHHHT-TTSTTTT-TTTHHHHS-S
T ss_pred CCcccHHHHHHHHHHHHcCCeeeccccHHHHHHHccC
Confidence 5556999999999876643 78999999998754
No 4
>COG0838 NuoA NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]
Probab=58.65 E-value=4.9 Score=32.13 Aligned_cols=18 Identities=28% Similarity=0.584 Sum_probs=16.4
Q ss_pred CCCCCccchhhhcccCCC
Q 029165 2 PRGPTRDKRRTYKSKDQK 19 (198)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~ 19 (198)
||.|+|.|.++||||.+.
T Consensus 34 p~~~~~~K~~~YE~G~~p 51 (123)
T COG0838 34 PRRPNPEKLSPYECGNPP 51 (123)
T ss_pred CCCCCccccCccccCCCC
Confidence 899999999999999764
No 5
>PF06478 Corona_RPol_N: Coronavirus RPol N-terminus; InterPro: IPR009469 This domain represents the N-terminal region of the coronavirus RNA-directed RNA Polymerase.; GO: 0003723 RNA binding, 0003968 RNA-directed RNA polymerase activity, 0005524 ATP binding, 0006351 transcription, DNA-dependent
Probab=49.72 E-value=9.5 Score=35.25 Aligned_cols=43 Identities=23% Similarity=0.414 Sum_probs=39.3
Q ss_pred eecCCCCC-cHHHHHHHHHHhhccCCCChhhHHHHHHcCCCcce
Q 029165 59 VFFDPKPD-DFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGT 101 (198)
Q Consensus 59 effdp~~~-DfhgIK~LL~qlf~~~~~dlseLaDlIi~Q~~vGT 101 (198)
.||||-|+ |+|.+-+-|-..+.++-++.-.++|+++++.-||-
T Consensus 149 ~WyDpVEN~di~~vy~kLG~iv~~a~L~~v~f~d~mv~~G~VGV 192 (355)
T PF06478_consen 149 DWYDPVENPDIHRVYAKLGPIVNRAMLKAVKFCDAMVEKGLVGV 192 (355)
T ss_pred cCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCeeEE
Confidence 58999998 99999999999998899999999999999988873
No 6
>PRK11593 folB bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; Provisional
Probab=30.82 E-value=1.9e+02 Score=22.05 Aligned_cols=33 Identities=12% Similarity=0.316 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHhhccCCCCh-----hhHHHHHHcCCCc
Q 029165 67 DFHGVKILLQTYLDDTQWDL-----SGFVDLILAQTTV 99 (198)
Q Consensus 67 DfhgIK~LL~qlf~~~~~dl-----seLaDlIi~Q~~v 99 (198)
||..|-..+..+..+..|++ .++|+.|+.+..+
T Consensus 52 dY~~v~~~I~~~~~~~~~~LlE~la~~ia~~i~~~~~~ 89 (119)
T PRK11593 52 SYADIAETVISHVEGARFALVERVAEEVAELLLARFNS 89 (119)
T ss_pred CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHhhCCC
Confidence 89999999999998888885 5577888877543
No 7
>cd04596 CBS_pair_DRTGG_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream. The function of the DRTGG domain, named after its conserved residues, is unknown. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=24.43 E-value=1.1e+02 Score=21.30 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=39.6
Q ss_pred CChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeeCCccCCchhHHHHHHHHHH---hcc-cchhHHHHHHHhcCCC
Q 029165 84 WDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLK---VCQ-EKDVIRDLRLLMGEQA 159 (198)
Q Consensus 84 ~dlseLaDlIi~Q~~vGTvIK~~~ded~dvfg~~SvLNL~~~k~~~~i~~L~~yLl~---~~~-~~~~~~~L~~lL~~~~ 159 (198)
..++++.+.+.. ...+.+.-+++ ++.+.|+++.-+|....... .+.+++.. .+. ...+...++.+... .
T Consensus 11 ~~~~~a~~~~~~-~~~~~~~V~d~--~~~~~G~v~~~~l~~~~~~~---~v~~~~~~~~~~v~~~~~l~~~~~~~~~~-~ 83 (108)
T cd04596 11 DTVKDWHELNKE-TGHSRFPVVDE--KNKVVGIVTSKDVAGKDPDT---TIEKVMTKNPITVNPKTSVASVAHMMIWE-G 83 (108)
T ss_pred CCHHHHHHHHHH-cCCCceeEECC--CCeEEEEecHHHHhcccccc---cHHHHhcCCCeEECCCCCHHHHHHHHHHc-C
Confidence 345566666644 44556655543 35699999976654322211 23444432 122 23355555555443 3
Q ss_pred CceEEEeec
Q 029165 160 HDVGLLVSQ 168 (198)
Q Consensus 160 ~~vGLlinE 168 (198)
.....++++
T Consensus 84 ~~~~~Vv~~ 92 (108)
T cd04596 84 IEMLPVVDD 92 (108)
T ss_pred CCeeeEEcC
Confidence 345566654
No 8
>PF10305 Fmp27_SW: RNA pol II promoter Fmp27 protein domain; InterPro: IPR019415 The function of the FMP27 protein is not known. FMP27 is the product of a nuclear encoded gene but it is detected in highly purified mitochondria in high-throughput studies []. This entry represents a conserved region within FMP27 that contains characteristic SW and GKG sequence motifs.
Probab=23.33 E-value=64 Score=24.55 Aligned_cols=61 Identities=15% Similarity=0.307 Sum_probs=41.7
Q ss_pred chhHHHHHHHHHHhcccchhHHHHHHHhcCCCCceEEEeecccccCCccchHHHHHHHHHHHHHh
Q 029165 128 HKCIKELKEFLLKVCQEKDVIRDLRLLMGEQAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWA 192 (198)
Q Consensus 128 ~~~i~~L~~yLl~~~~~~~~~~~L~~lL~~~~~~vGLlinER~iN~P~ql~ppL~~~L~eEI~wA 192 (198)
..+|+.+..+-.... .........+.+....+...-.+++++..| -.|||...+++++...
T Consensus 12 ~SWi~ri~~~k~~~~--~~~~~~~~~~~G~~~~~~~~~~~~~il~~~--~~ppL~~~~~~~l~l~ 72 (103)
T PF10305_consen 12 TSWIRRIRKAKRTQK--RRIKENRSYLWGNDDVPDDIDENENILPYP--QRPPLMRAIFEDLDLT 72 (103)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHhhCCCCCCCccccCcccccCC--CCcHhHHHHHhcccEE
Confidence 456666666655433 234555667777765667777888888554 6799999999988654
No 9
>PF06597 Clostridium_P47: Clostridium P-47 protein; InterPro: IPR010567 This family consists of several P-47 proteins from various Clostridium species [] as well as related sequences from other bacteria. The function of this family is unknown.
Probab=22.66 E-value=1.6e+02 Score=28.16 Aligned_cols=28 Identities=29% Similarity=0.361 Sum_probs=16.2
Q ss_pred ceEEE--EEeecCCCCCcHHHHHHHHHHhh
Q 029165 52 GVVQA--DFVFFDPKPDDFHGVKILLQTYL 79 (198)
Q Consensus 52 e~V~V--DFeffdp~~~DfhgIK~LL~qlf 79 (198)
-.|.+ .+.|-+|...+--.++.+|.++|
T Consensus 124 ~vi~i~~~~~~~~~~~~~~~~~~~~~~~ll 153 (456)
T PF06597_consen 124 AVIIILEGINFTDPDGDNDSIAKALFSALL 153 (456)
T ss_pred ceEEeeccccccCCccchhHHHHHHHHHHH
Confidence 35555 57788887755555455444433
No 10
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=22.61 E-value=1.4e+02 Score=25.54 Aligned_cols=58 Identities=17% Similarity=0.168 Sum_probs=37.9
Q ss_pred ecCCCCCcHHHHHHHHHHhhcc----CCCChhhHHHHHHcCCC-cceEEEecCCCCCCceEEEEe
Q 029165 60 FFDPKPDDFHGVKILLQTYLDD----TQWDLSGFVDLILAQTT-VGTVVKMEGDDDDTPFSIVTA 119 (198)
Q Consensus 60 ffdp~~~DfhgIK~LL~qlf~~----~~~dlseLaDlIi~Q~~-vGTvIK~~~ded~dvfg~~Sv 119 (198)
++.+.+.|...+..||+.|+.+ ..|+-.++.-.++.+.. |-|-|..++ + ..+-.|+|.
T Consensus 31 lR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~-~-~~ITDf~SF 93 (190)
T PF02799_consen 31 LRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDP-D-GKITDFFSF 93 (190)
T ss_dssp EEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEET-T-SEEEEEEEE
T ss_pred cccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecC-C-CceeeEEEE
Confidence 5667888999999999999864 67888999999998765 555555553 2 334444443
No 11
>PF02152 FolB: Dihydroneopterin aldolase; InterPro: IPR006157 Dihydroneopterin aldolase catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. In the opportunistic pathogen Pneumocystis carinii, dihydroneopterin aldolase function is expressed as the N-terminal portion of the multifunctional folic acid synthesis protein (Fas). This region encompasses two domains, FasA and FasB, which are 27% amino acid identical. FasA and FasB also share significant amino acid sequence similarity with bacterial dihydroneopterin aldolases. This region consists of two tandem sequences each homologous to folB and which form tetramers [].; GO: 0004150 dihydroneopterin aldolase activity, 0006760 folic acid-containing compound metabolic process; PDB: 1SQL_P 2O90_A 1B9L_A 1RSI_A 2NM2_C 1RRY_A 1RRW_A 1RS2_A 2DHN_A 1DHN_A ....
Probab=22.17 E-value=1.4e+02 Score=22.15 Aligned_cols=37 Identities=16% Similarity=0.373 Sum_probs=28.2
Q ss_pred CCCCC-cHHHHHHHHHHhhccCCCCh-----hhHHHHHHcCCC
Q 029165 62 DPKPD-DFHGVKILLQTYLDDTQWDL-----SGFVDLILAQTT 98 (198)
Q Consensus 62 dp~~~-DfhgIK~LL~qlf~~~~~dl-----seLaDlIi~Q~~ 98 (198)
+.... ||..|...++.++.+..|++ ..+++.|..+-.
T Consensus 43 ~l~~tvdY~~l~~~i~~~~~~~~f~llE~la~~i~~~i~~~~~ 85 (113)
T PF02152_consen 43 DLDDTVDYAELAEAIRELVENSHFNLLETLAERIADRILKEFP 85 (113)
T ss_dssp TGGGSSHHHHHHHHHHHHHHSSEESSHHHHHHHHHHHHHHHTT
T ss_pred ccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHhCC
Confidence 44444 99999999999999888883 447777777644
No 12
>KOG3375 consensus Phosphoprotein/predicted coiled-coil protein [General function prediction only]
Probab=21.92 E-value=44 Score=28.03 Aligned_cols=23 Identities=26% Similarity=0.175 Sum_probs=12.2
Q ss_pred CCCCcc-ccCCCCCCCCCCcCCCC
Q 029165 28 KGIPKH-TLEGKSDLSGSSEEEGS 50 (198)
Q Consensus 28 ~~~~~~-~~~~~~~~~d~sdde~~ 50 (198)
++-.++ ..++...++|+|+|+++
T Consensus 44 ~~~~~d~~~ee~~~~~dssed~Ed 67 (174)
T KOG3375|consen 44 DGAAGDPKKEESELDSDSSEDSED 67 (174)
T ss_pred cccccCcchhhhcccccccchhhh
Confidence 344444 33344556777777654
Done!