BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029167
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3HVN1|AGUB_SOLTU N-carbamoylputrescine amidase OS=Solanum tuberosum GN=CPA PE=2 SV=1
Length = 300
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/141 (87%), Positives = 133/141 (94%)
Query: 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF 64
K R V V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E+FF
Sbjct: 4 KNRLVTVAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFF 63
Query: 65 QRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI 124
RAKPY HPTI++MQ LAKELGVV+PVSFFEEANNAHYNS+AIIDADG+DLGLYRKSHI
Sbjct: 64 HRAKPYLGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHI 123
Query: 125 PDGPGYQEKFYFNPGDTGFKV 145
PDGPGYQEKFYFNPGDTGFKV
Sbjct: 124 PDGPGYQEKFYFNPGDTGFKV 144
>sp|Q9XGI9|AGUB_SOLLC N-carbamoylputrescine amidase OS=Solanum lycopersicum GN=CPA PE=2
SV=1
Length = 300
Score = 264 bits (674), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/141 (87%), Positives = 133/141 (94%)
Query: 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF 64
K R V V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E+FF
Sbjct: 4 KNRLVTVAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFF 63
Query: 65 QRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI 124
RAKPY HPTI++MQ LAKELGVV+PVSFFEEANNAHYNS+AIIDADG+DLGLYRKSHI
Sbjct: 64 HRAKPYPGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHI 123
Query: 125 PDGPGYQEKFYFNPGDTGFKV 145
PDGPGYQEK+YFNPGDTGFKV
Sbjct: 124 PDGPGYQEKYYFNPGDTGFKV 144
>sp|Q8VYF5|AGUB_ARATH N-carbamoylputrescine amidase OS=Arabidopsis thaliana GN=CPA PE=1
SV=1
Length = 326
Score = 258 bits (660), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 138/170 (81%), Gaps = 27/170 (15%)
Query: 3 KGKRREVVVSALQFACTDDVSTNLATAER---------------------------LVRA 35
+G+RREVVVS+LQFAC+DD+STN+A AER LVR
Sbjct: 4 EGRRREVVVSSLQFACSDDISTNVAAAERFVSLSSSLPLSNYQSLPSSSSFKFPYALVRE 63
Query: 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF 95
AH KGANIILIQELFEGYYFCQAQREDFF+RAKPYK+HPTI +MQ+LAKELGVV+PVSFF
Sbjct: 64 AHAKGANIILIQELFEGYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVIPVSFF 123
Query: 96 EEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKV 145
EEAN AHYNSIAIIDADG+DLG+YRKSHIPDGPGYQEKFYFNPGDTGFKV
Sbjct: 124 EEANTAHYNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTGFKV 173
>sp|Q93XI4|AGUB_ORYSJ N-carbamoylputrescine amidase OS=Oryza sativa subsp. japonica
GN=CPA PE=2 SV=1
Length = 301
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/142 (78%), Positives = 126/142 (88%)
Query: 4 GKRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDF 63
G +V V+A+QFACTD S N+ TAERL+R AH KGANI+L+QELFEG YFCQAQR DF
Sbjct: 6 GAGSKVSVAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDF 65
Query: 64 FQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSH 123
FQRAKPYK +PTI++ Q+LAKEL VV+PVSFFEEANNAHYNS+AIIDADG+DLGLYRKSH
Sbjct: 66 FQRAKPYKGNPTIIRFQKLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSH 125
Query: 124 IPDGPGYQEKFYFNPGDTGFKV 145
IPDGPGYQEKFYFNPGDTGFK
Sbjct: 126 IPDGPGYQEKFYFNPGDTGFKA 147
>sp|Q9UBR1|BUP1_HUMAN Beta-ureidopropionase OS=Homo sapiens GN=UPB1 PE=1 SV=1
Length = 384
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 32 LVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90
+V A G NII QE + + FC ++ + + A+ +D PT Q+LAK +V+
Sbjct: 103 IVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVV 162
Query: 91 PVSFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKV 145
E E + +N+ +I G+ LG RK+HIP + E Y+ G+ G V
Sbjct: 163 VSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPV 220
>sp|Q5RBM6|BUP1_PONAB Beta-ureidopropionase OS=Pongo abelii GN=UPB1 PE=2 SV=1
Length = 384
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 32 LVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90
+V A G NII QE + + FC ++ + + A+ +D PT Q+LAK +V+
Sbjct: 103 IVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVV 162
Query: 91 PVSFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKV 145
E E + +N+ +I G+ LG RK+HIP + E Y+ G+ G V
Sbjct: 163 VSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPV 220
>sp|P60327|DCAS_AGRSK N-carbamoyl-D-amino acid hydrolase OS=Agrobacterium sp. (strain
KNK712) PE=1 SV=1
Length = 304
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 21/132 (15%)
Query: 32 LVRAAHGKGANIILIQEL-----FEGYYFC-QAQREDFFQRAKPYKDHPTILKMQELAKE 85
++ A +GAN I+ EL F ++F +A+ + F++ P P + + E A E
Sbjct: 31 MLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMP---GPVVRPLFEKAAE 87
Query: 86 LGVVMPVSF----FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQ--------EK 133
LG+ + + E +N+ ++D G +G YRK H+P Y+ EK
Sbjct: 88 LGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEK 147
Query: 134 FYFNPGDTGFKV 145
YF PGD GF V
Sbjct: 148 RYFEPGDLGFPV 159
>sp|Q6INI7|NIT2B_XENLA Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1
Length = 276
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
+S +QF + S NL A +L++ A KGA I+ + E F Y + F + A+
Sbjct: 6 LSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPYGTKY----FPEYAEKI 61
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
T L + ++AKE G+ ++ S EE + YN+ A+ DG+ L +RK H+ D
Sbjct: 62 PGESTEL-LSQVAKECGIYLIGGSIPEEDSGKFYNTCAVFGPDGTLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDT 141
PG +QE +PGD+
Sbjct: 121 PGKIRFQESETLSPGDS 137
>sp|Q9X0Y0|NADE2_THEMA Probable glutamine-dependent NAD(+) synthetase OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=nadE2 PE=3 SV=1
Length = 576
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELF-EGYYFCQAQREDF 63
KR V ++ L D NL A +R A +G+++++ ELF GY ED
Sbjct: 2 KRLRVTLAQLN-PTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGY-----PPEDL 55
Query: 64 FQRAKPYKDHPTIL-KMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKS 122
R +++ L K + + LGV + + F + +A YN+ A++ DG LG+YRK
Sbjct: 56 MLRLSFLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVV-KDGEILGVYRKI 113
Query: 123 HIPDGPGYQEKFYFNPGD 140
+P+ + E+ YF PG+
Sbjct: 114 SLPNYGVFDERRYFKPGE 131
>sp|Q28IE5|NIT2_XENTR Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1
Length = 276
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
+S +QF + S NL A +L++ A KGA I+ + E F Y + +F
Sbjct: 6 LSLVQFLVSPVKSENLNRACKLIKEAAQKGAQIVALPECFNSPYGTK-----YFPEYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ ++ ++AKE G+ ++ S EE + YN+ A+ DG+ L +RK H+ D
Sbjct: 61 IPGESTERLSQVAKECGIYLIGGSIPEEDSGKLYNTCAVFGPDGTLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDT 141
PG +QE +PGD+
Sbjct: 121 PGKIRFQESETLSPGDS 137
>sp|Q44185|DCAS_RHIRD N-carbamoyl-D-amino acid hydrolase OS=Rhizobium radiobacter PE=1
SV=1
Length = 304
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 1 MEKGKRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL-----FEGYYF 55
+ + + RE VV L D+ TN A+ +G N I+ EL F ++F
Sbjct: 15 IARAETREQVVGRLL-----DMLTNAAS----------RGVNFIVFPELALTTFFPRWHF 59
Query: 56 C-QAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSF----FEEANNAHYNSIAIID 110
+A+ + F++ P P + + E A ELG+ + + E +N+ ++D
Sbjct: 60 TDEAELDSFYETEMP---GPVVRPLFETAAELGIGFNLGYAELVVEGGVKRRFNTSILVD 116
Query: 111 ADGSDLGLYRKSHIPDGPGYQ--------EKFYFNPGDTGFKV 145
G +G YRK H+P Y+ EK YF PGD GF V
Sbjct: 117 KSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPV 159
>sp|Q10166|YAUB_SCHPO UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC26A3.11 PE=3 SV=1
Length = 322
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQR 66
R + +Q A T D S NL A V A G+N+I++ E+F Y F Q
Sbjct: 42 RAFRIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGY----FNQY 97
Query: 67 AKPYKD-HPTILKMQELAKELGVVM-PVSFFEEANNAHYNSIAIIDADGSDLGLYRKSH- 123
A+P ++ P+ + +AK+ + S E + YN+ + D G + ++RK H
Sbjct: 98 AEPIEESSPSYQALSSMAKDTKTYLFGGSIPERKDGKLYNTAMVFDPSGKLIAVHRKIHL 157
Query: 124 ----IPDGPGYQEKFYFNPGD 140
IP G ++E +PGD
Sbjct: 158 FDIDIPGGVSFRESDSLSPGD 178
>sp|Q6IR61|NIT2A_XENLA Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1
Length = 276
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
+S +QF + S NL A +L++ A KGA I+ + E F Y F + A+
Sbjct: 6 LSLVQFLVSPVKSDNLNRACKLIKEAAQKGAQIVALPECFNSPY----GTTYFPEYAEKI 61
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
T L + ++AKE G+ ++ S EE YN+ A+ DG+ L +RK H+ D
Sbjct: 62 PGESTEL-LSQVAKECGIYLIGGSIPEEDCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDT 141
PG +QE +PGD+
Sbjct: 121 PGKIRFQESETLSPGDS 137
>sp|Q8VC97|BUP1_MOUSE Beta-ureidopropionase OS=Mus musculus GN=Upb1 PE=2 SV=1
Length = 393
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 19 TDDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTIL 77
+ VS + E + A G NII QE + + FC ++ + + A+ +D T
Sbjct: 90 AEQVSALHKSIEEIAEVAAMCGVNIICFQEAWNMPFAFCTREKLPWTEFAESAEDGLTTR 149
Query: 78 KMQELAKELGVVMPVSFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKF 134
Q+LAK+ +V+ E E +N+ +I G +G RK+HIP + E
Sbjct: 150 FCQKLAKKHNMVVVSPILERDREHGGVLWNTAVVISNSGLVMGKTRKNHIPRVGDFNEST 209
Query: 135 YFNPGDTGFKV 145
Y+ G+ G V
Sbjct: 210 YYMEGNLGHPV 220
>sp|Q497B0|NIT2_RAT Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1
Length = 276
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH 73
+Q + S N+ A LVR A +GANI+ + E F Y ++F
Sbjct: 9 IQLQVSSIKSDNITRACSLVREAAKQGANIVSLPECFNSPY-----GTNYFPEYAEKIPG 63
Query: 74 PTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG- 129
+ K+ E+AKE + ++ S EE + YN+ A+ DG+ L +RK H+ D PG
Sbjct: 64 ESTKKLSEVAKENSIYLIGGSIPEEDDGKLYNTCAVFGPDGNLLVKHRKIHLFDIDVPGK 123
Query: 130 --YQEKFYFNPGDT 141
+QE +PGD+
Sbjct: 124 ITFQESKTLSPGDS 137
>sp|Q9JHW2|NIT2_MOUSE Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV=1
Length = 276
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH 73
+Q + S NL A LVR A +GANI+ + E F Y +F
Sbjct: 9 IQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPY-----GTTYFPDYAEKIPG 63
Query: 74 PTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG- 129
+ K+ E+AKE + ++ S EE YN+ ++ DGS L +RK H+ D PG
Sbjct: 64 ESTQKLSEVAKESSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGK 123
Query: 130 --YQEKFYFNPGDT 141
+QE +PGD+
Sbjct: 124 ITFQESKTLSPGDS 137
>sp|Q5R4L6|NIT2_PONAB Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV=1
Length = 275
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH 73
+Q + S N+ A +R A +GA I+ + E F Y + +F
Sbjct: 9 IQLQISSINSDNVTRACSFIREAATQGAKIVSLPECFNSPYGTK-----YFPEYAEKIPG 63
Query: 74 PTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG- 129
+ K+ E+AKE + ++ S EE YN+ A+ DG+ L YRK H+ D PG
Sbjct: 64 ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGK 123
Query: 130 --YQEKFYFNPGDTGFKVGAWNNLNLNLICF 158
+QE +PGD+ + + L IC+
Sbjct: 124 ITFQESKTLSPGDSFCTFDTYCRVGLG-ICY 153
>sp|Q964D8|BUP1_DICDI Beta-ureidopropionase OS=Dictyostelium discoideum GN=pyd3 PE=1 SV=1
Length = 391
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 27 ATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85
A E+++ AA G N++ +QE + + FC ++ + + A+ +I +Q +A++
Sbjct: 101 AKIEKMIDAAGAMGVNVLCLQETWHMPFAFCTREKYPWVEFAESASTGQSIKFIQRMARK 160
Query: 86 LGVVMPVSFFEEANNAH----YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDT 141
+V+ +S E ++ H +N+ ++ +G+ +G RK+HIP + E Y+
Sbjct: 161 YNMVI-ISPMLERDDVHASTIHNTAVVVGNNGNIIGKSRKNHIPRTGDFNESTYYMESTL 219
Query: 142 GFKV 145
G V
Sbjct: 220 GHPV 223
>sp|Q9NQR4|NIT2_HUMAN Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV=1
Length = 276
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH 73
+Q + S N+ A +R A +GA I+ + E F Y + +F
Sbjct: 9 IQLQISSIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAK-----YFPEYAEKIPG 63
Query: 74 PTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG- 129
+ K+ E+AKE + ++ S EE YN+ A+ DG+ L YRK H+ D PG
Sbjct: 64 ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGK 123
Query: 130 --YQEKFYFNPGDT 141
+QE +PGD+
Sbjct: 124 ITFQESKTLSPGDS 137
>sp|Q4VBV9|NIT2_DANRE Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1
Length = 277
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ +Q + + NL A+ LV+ A G+GA ++++ E F Y FF+
Sbjct: 6 LAVVQLHVSKIKADNLGRAQTLVKEAAGQGAKVVVLPECFNSPY-----GTGFFKEYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ + E AK+ G+ ++ S EE YN+ ++ DG+ L +RK H+ D
Sbjct: 61 IPGESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDT 141
PG +QE +PG +
Sbjct: 121 PGKIRFQESETLSPGKS 137
>sp|Q03248|BUP1_RAT Beta-ureidopropionase OS=Rattus norvegicus GN=Upb1 PE=1 SV=1
Length = 393
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 19 TDDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTIL 77
+ VS E + A G NII QE + + FC ++ + + A+ +D T
Sbjct: 90 AEQVSALHKRIEEIAEVAAMCGVNIICFQEAWNMPFAFCTREKLPWTEFAESAEDGLTTR 149
Query: 78 KMQELAKELGVVMPVSFFEEANNAH----YNSIAIIDADGSDLGLYRKSHIPDGPGYQEK 133
Q+LAK+ +V+ +S E + H +N+ +I G +G RK+HIP + E
Sbjct: 150 FCQKLAKKHNMVV-ISPILERDRDHGGVLWNTAVVISNSGLVMGKTRKNHIPRVGDFNES 208
Query: 134 FYFNPGDTGFKV 145
Y+ G+ G V
Sbjct: 209 TYYMEGNLGHPV 220
>sp|Q2T9R6|NIT2_BOVIN Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1
Length = 276
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH 73
+Q + S NL A L+R A +GA I+ + E F Y + +F
Sbjct: 9 IQLQVSSIKSENLTRACGLIREASKQGAQIVSLPECFNSPYGTK-----YFPDYAEKIPG 63
Query: 74 PTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG- 129
+ K+ E+AKE + V+ S E+ YN+ A+ DG+ L +RK H+ D PG
Sbjct: 64 DSTQKLSEVAKECSMYVIGGSIPEKDAGKLYNTCAVFGPDGTLLVKHRKLHLFDIDVPGK 123
Query: 130 --YQEKFYFNPGDT 141
+QE +PGD+
Sbjct: 124 ITFQESETLSPGDS 137
>sp|Q8VDK1|NIT1_MOUSE Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 SV=2
Length = 323
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T + N T LV+ A GA + + E F+ F + ++P
Sbjct: 44 LVAVCQVTSTPNKQENFKTCAELVQEAARLGACLAFLPEAFD---FIARNPAETLLLSEP 100
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
+ + +LA+E G+ + + F E N YN ++++ GS + YRK+H
Sbjct: 101 LNGD-LLGQYSQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTH 159
Query: 124 IPD------GPGYQEKFYFNPGDT 141
+ D GP +E Y PG T
Sbjct: 160 LCDVEIPGQGP-MRESNYTKPGGT 182
>sp|Q32LH4|NIT1_BOVIN Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=1
Length = 328
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T D N T L+R A GA + + E F+ F E+ + ++P
Sbjct: 49 LVAVCQVTSTPDKEQNFKTCAELIREAARLGACLAFLPEAFD---FIARDPEETRRLSEP 105
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
+ + + +LA+E G+ + + F E YN I++ GS + YRK+H
Sbjct: 106 LSGN-LLEEYTQLARECGLWLSLGGFHERGQDWEQTQKIYNCHVIMNNMGSVVATYRKTH 164
Query: 124 IPD 126
+ D
Sbjct: 165 LCD 167
>sp|P55175|Y601_SYNY3 UPF0012 hydrolase sll0601 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0601 PE=3 SV=1
Length = 272
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 20/162 (12%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+ +ALQ +++ NL AE L+ A +GA ++ L E + F + E Q
Sbjct: 5 LAAALQMTSRPNLTENLQEAEELIDLAVRQGAELV---GLPENFAFLGNETEKLEQATAI 61
Query: 70 YKDHPTILKMQELAKELGVVM-----PVSFFEEANNAHYNSIAIIDADGSDLGLYRKSH- 123
L Q +A+ V + P EA A YN+ +I +G +L Y K H
Sbjct: 62 ATATEKFL--QTMAQRFQVTILAGGFPFPVAGEAGKA-YNTATLIAPNGQELARYHKVHL 118
Query: 124 ----IPDGPGYQEKFYFNPGDT---GFKVGAWNNLNLNLICF 158
+PDG Y E G + ++ NL L+ IC+
Sbjct: 119 FDVNVPDGNTYWESATVMAGQKYPPVYHSDSFGNLGLS-ICY 159
>sp|Q86X76|NIT1_HUMAN Nitrilase homolog 1 OS=Homo sapiens GN=NIT1 PE=1 SV=2
Length = 327
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T D N T LVR A GA + + E F+ F + ++P
Sbjct: 48 LVAVCQVTSTPDKQQNFKTCAELVREAARLGACLAFLPEAFD---FIARDPAETLHLSEP 104
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
+ + +LA+E G+ + + F E YN ++++ G+ + YRK+H
Sbjct: 105 LGGK-LLEEYTQLARECGLWLSLGGFHERGQDWEQTQKIYNCHVLLNSKGAVVATYRKTH 163
Query: 124 IPD 126
+ D
Sbjct: 164 LCD 166
>sp|Q7TQ94|NIT1_RAT Nitrilase homolog 1 OS=Rattus norvegicus GN=Nit1 PE=2 SV=1
Length = 292
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T + N T LV+ A GA + + E F+ F + ++P
Sbjct: 13 LVAVCQVTSTPNKQENFKTCAELVQEATRLGACLAFLPEAFD---FIARNPAETLLLSEP 69
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
D + + +LA+E G+ + + F E YN ++++ GS + YRK+H
Sbjct: 70 L-DGDLLGQYSQLARECGIWLSLGGFHERGQDWEQTQKIYNCHVLLNSKGSVVASYRKTH 128
Query: 124 IPD------GPGYQEKFYFNPG 139
+ D GP +E Y PG
Sbjct: 129 LCDVEIPGQGP-MRESNYTMPG 149
>sp|Q9CBZ6|NADE_MYCLE Glutamine-dependent NAD(+) synthetase OS=Mycobacterium leprae
(strain TN) GN=nadE PE=3 SV=1
Length = 680
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAK 68
V + A D +TN A+ RL R H G + + EL GY +D A
Sbjct: 14 VAACTHHASIGDPTTNAASVLRLARQCHDDGVAVAVFPELTLSGYSIEDILLQDLLLEAV 73
Query: 69 PYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGP 128
T+L + + +L V+ + + YN+ A+I G LG+ KS++P
Sbjct: 74 ----EDTVLDIVVASADLLPVLVIGAPLRYRHRIYNT-AVIIHRGVVLGVAPKSYLPTYR 128
Query: 129 GYQEKFYFNPGD 140
+ E+ PGD
Sbjct: 129 EFYERRQLAPGD 140
>sp|O59829|YCU9_SCHPO Probable nitrilase C965.09 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC965.09 PE=4 SV=1
Length = 272
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 21 DVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILK 78
DV NL V N+IL EL Y C F Q A+ + P+
Sbjct: 16 DVKHNLQKMSSYVHEVMESNPSTNLILFPELITSGYECG---NTFTQIAEIAGEGPSFKT 72
Query: 79 MQELAKELGVVMPVSF---FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFY 135
M LA + V + F E+ +N YNS I +G+ G+YRK H+ D E+ +
Sbjct: 73 MSNLAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHLFD----TERKH 128
Query: 136 FNPG 139
F G
Sbjct: 129 FKKG 132
>sp|P47016|NIT2_YEAST Probable hydrolase NIT2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NIT2 PE=3 SV=1
Length = 307
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANII--------LIQELFEGYYFCQAQRED 62
V+ Q + D++ NL + L+ A K A+++ L Q Y Q +
Sbjct: 8 VAVAQLCSSADLTKNLKVVKELISEAIQKKADVVFLPEASDYLSQNPLHSRYLAQ-KSPK 66
Query: 63 FFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE--EANNAHYNSIAIIDADGSDLGLYR 120
F ++ + + + +GV +P S + E N+ N + ID +G L Y+
Sbjct: 67 FIRQLQSSITDLVRDNSRNIDVSIGVHLPPSEQDLLEGNDRVRNVLLYIDHEGKILQEYQ 126
Query: 121 KSH-----IPDGPGYQEKFYFNPG 139
K H +P+GP +E PG
Sbjct: 127 KLHLFDVDVPNGPILKESKSVQPG 150
>sp|Q04958|NTE1_YEAST Lysophospholipase NTE1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NTE1 PE=1 SV=1
Length = 1679
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 63 FFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNA 101
F R P+ HP I M E+ LG V V+ E+A N
Sbjct: 1570 IFNRWNPFSSHPNIPNMAEIQVRLGYVASVNALEKAKNT 1608
>sp|O68008|BACC_BACLI Bacitracin synthase 3 OS=Bacillus licheniformis GN=bacC PE=3 SV=1
Length = 6359
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 2 EKGKR--REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ 59
EKG R E ++ A DD T + T ++ +G I++ ELF Y+ +A+
Sbjct: 5195 EKGFRLNSEPLIRAALMRTEDDSYTFIWTNHHILLDGWSRG---IIMGELFHMYHMKEAR 5251
Query: 60 REDFFQRAKPYKDHPTILKMQE 81
++ + A+PY D+ L+ Q+
Sbjct: 5252 QKHRLEEARPYSDYIGWLQQQD 5273
>sp|Q01S58|GH109_SOLUE Glycosyl hydrolase family 109 protein OS=Solibacter usitatus
(strain Ellin6076) GN=Acid_6590 PE=3 SV=1
Length = 438
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 54 YFCQAQREDF--FQRAKPYKDHPTILKMQELAKELG 87
YF A+REDF R K +HP K+ ELAKELG
Sbjct: 336 YFDGARREDFETLDRYKEKYEHPLWKKVGELAKELG 371
>sp|P46011|NRL4_ARATH Bifunctional nitrilase/nitrile hydratase NIT4 OS=Arabidopsis
thaliana GN=NIT4 PE=1 SV=1
Length = 355
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 16/137 (11%)
Query: 1 MEKGKRREVVVSALQFACTD--DVSTNLATAERLVRAAHGKGANIILIQELFEGYY---- 54
M G +V + + A T D L AERL+ A G+ +++ E F G Y
Sbjct: 27 MSAGDSSSIVRATVVQASTVFYDTPATLDKAERLLSEAAENGSQLVVFPEAFIGGYPRGS 86
Query: 55 --------FCQAQREDFFQRAKPYKD--HPTILKMQELAKELGVVMPVSFFEEANNAHYN 104
R+DF + D P + ++ +AK+ V + + E Y
Sbjct: 87 TFELAIGSRTAKGRDDFRKYHASAIDVPGPEVERLALMAKKYKVYLVMGVIEREGYTLYC 146
Query: 105 SIAIIDADGSDLGLYRK 121
++ D+ G LG +RK
Sbjct: 147 TVLFFDSQGLFLGKHRK 163
>sp|Q87D47|NADE_XYLFT Probable glutamine-dependent NAD(+) synthetase OS=Xylella
fastidiosa (strain Temecula1 / ATCC 700964) GN=nadE PE=3
SV=1
Length = 545
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 29 AERLV----RAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83
AER++ +A GA++++ EL GY ED R + H + + A
Sbjct: 23 AERIIALIEQARDEHGADVVMFPELALSGY-----PPEDLLLRPG-FLAHCQVAIERIAA 76
Query: 84 KELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG- 142
G+V V + + A + YN +A + DG YRK +P+ + E+ YF G
Sbjct: 77 ATHGIVAVVGWPQSAGSVVYN-VASVLCDGQVEQTYRKRELPNYAVFDERRYFEVDPNGS 135
Query: 143 ---FKVGAWNNLNLNLICFFDLIFDD 165
FKV + + ++ DL F +
Sbjct: 136 RCVFKV---KGVPVGVLICEDLWFSE 158
>sp|Q9PC24|NADE_XYLFA Probable glutamine-dependent NAD(+) synthetase OS=Xylella
fastidiosa (strain 9a5c) GN=nadE PE=3 SV=1
Length = 545
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 29 AERLV----RAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83
AER++ +A GA++++ EL GY ED R + H + + A
Sbjct: 23 AERIIALIEQARDEHGADVVMFPELALSGY-----PPEDLLLRPG-FLAHCQVAIERIAA 76
Query: 84 KELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG- 142
G+V V + + A + YN +A + DG YRK +P+ + E+ YF G
Sbjct: 77 ATHGIVAVVGWPQSAGSVVYN-VASVLCDGQVEQTYRKRELPNYAVFDERRYFEVDPNGS 135
Query: 143 ---FKVGAWNNLNLNLICFFDLIFDD 165
FKV + + ++ DL F +
Sbjct: 136 RCVFKV---KGVPVGVLICEDLWFSE 158
>sp|A1RQ92|GPDA_SHESW Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Shewanella sp.
(strain W3-18-1) GN=gpsA PE=3 SV=1
Length = 338
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 23/112 (20%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH 73
L CTD+ S N R A GKG +++ Q + Q + Y++
Sbjct: 248 LVLTCTDNQSRN-----RRFGLALGKGCDVMTAQA-------------EIGQVVEGYRNT 289
Query: 74 PTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIP 125
+ LAK LGV MP++ E+ Y + +DA LG +KS P
Sbjct: 290 KEVFT---LAKRLGVEMPIT--EQIYQVLYQGKSPVDAAKELLGREKKSETP 336
>sp|A4Y1E6|GPDA_SHEPC Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=gpsA PE=3
SV=1
Length = 338
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 23/112 (20%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH 73
L CTD+ S N R A GKG +++ Q + Q + Y++
Sbjct: 248 LVLTCTDNQSRN-----RRFGLALGKGCDVMTAQA-------------EIGQVVEGYRNT 289
Query: 74 PTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIP 125
+ LAK LGV MP++ E+ Y + +DA LG +KS P
Sbjct: 290 KEVFT---LAKRLGVEMPIT--EQIYQVLYQGKSPVDAAKELLGREKKSETP 336
>sp|P20960|NRLA_ALCFA Nitrilase, arylacetone-specific OS=Alcaligenes faecalis PE=1 SV=2
Length = 356
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 6 RREVVVSALQFACTD-DVSTNLATAERLVRAAHGKGANIILIQELF-EGYYF---CQAQR 60
R+ V +A+Q A + D++T + L R A +G ++I+ E + GY F A
Sbjct: 4 RKIVRAAAVQAASPNYDLATGVDKTIELARQARDEGCDLIVFGETWLPGYPFHVWLGAPA 63
Query: 61 EDFFQRAKPYK-----DHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSD 115
A+ Y D ++ + A+ LG+ + + + E + + Y +ID G
Sbjct: 64 WSLKYSARYYANSLSLDSAEFQRIAQAARTLGIFIALGYSERSGGSLYLGQCLIDDKGQM 123
Query: 116 LGLYRK---SHIPD---GPGYQEKFYFNPGDTGFKVGA---WNNLN 152
L RK +H+ G GY + + G +VGA W +L+
Sbjct: 124 LWSRRKLKPTHVERTVFGEGYARDLIVSDTELG-RVGALCCWEHLS 168
>sp|P0A5L6|NADE_MYCTU Glutamine-dependent NAD(+) synthetase OS=Mycobacterium tuberculosis
GN=nadE PE=1 SV=1
Length = 679
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAK 68
V + D + N A+ + RA H GA + + EL GY +D A
Sbjct: 14 VAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAV 73
Query: 69 PYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGP 128
+L + + +L V+ V + YN+ +I G+ LG+ KS++P
Sbjct: 74 ----EDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYR 128
Query: 129 GYQEKFYFNPGD 140
+ E+ PGD
Sbjct: 129 EFYERRQMAPGD 140
>sp|P0A5L7|NADE_MYCBO Glutamine-dependent NAD(+) synthetase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=nadE PE=3 SV=1
Length = 679
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAK 68
V + D + N A+ + RA H GA + + EL GY +D A
Sbjct: 14 VAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAV 73
Query: 69 PYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGP 128
+L + + +L V+ V + YN+ +I G+ LG+ KS++P
Sbjct: 74 ----EDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYR 128
Query: 129 GYQEKFYFNPGD 140
+ E+ PGD
Sbjct: 129 EFYERRQMAPGD 140
>sp|Q557J5|NIT1_DICDI Nitrilase homolog 1 OS=Dictyostelium discoideum GN=nit1-1 PE=3 SV=1
Length = 291
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 15 QFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP-YKDH 73
Q T++ N + ++ A N+ + E F F F R Y D
Sbjct: 19 QITSTNNKEDNFRKCKEMIEKAVENKVNLFCLPECFA---FISGGIHQFESRDNAEYLDQ 75
Query: 74 P--TILKMQELAKELGVVMPVSFFEEA-----NNAHYNSIAIIDADGSDLGLYRKSHIPD 126
I + ++LAK+ + + + F E N+ YN+ IID++G + YRK H+ D
Sbjct: 76 KGGIIERYKDLAKQNNIWLSLGGFHEKILDDPNDMIYNTHLIIDSNGVIVCEYRKMHLFD 135
>sp|Q9ZJY8|AMIF_HELPJ Formamidase OS=Helicobacter pylori (strain J99) GN=amiF PE=3 SV=1
Length = 334
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV+ + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVLSIMERNPDSNENPYNTAIIIDPQGKIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKV 145
YRK P P E +Y PGD G V
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPV 152
>sp|P55176|YPQQ_PSEFL UPF0012 hydrolase in pqqF 5'region OS=Pseudomonas fluorescens PE=3
SV=1
Length = 285
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 103 YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVGAWNNLNLNLICFFDLI 162
YN++ +IDA G L YRK+H+ G + F+ G+ F + + L + +D+
Sbjct: 113 YNAVQLIDAQGQRLCNYRKTHL---FGDLDHSMFSAGEDDFPLVELDGWKLGFLICYDIE 169
Query: 163 FDDD 166
F ++
Sbjct: 170 FPEN 173
>sp|O76463|NFT1_CAEEL Nitrilase and fragile histidine triad fusion protein NitFhit
OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1
Length = 440
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ Q +D+ N A+ ++ A K ++ + E F+ + ++ D
Sbjct: 17 IAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMAT--- 73
Query: 71 KDHPTILKMQELAKELGVVMPVSFFEE---ANNAH-YNSIAIIDADGSDLGLYRKSHIPD 126
D + K +ELA++ + + + ++ AH +N+ IID+DG Y K H+ D
Sbjct: 74 -DCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFD 132
>sp|Q28397|MMP3_HORSE Stromelysin-1 OS=Equus caballus GN=MMP3 PE=2 SV=1
Length = 477
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 28 TAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH-PTILKMQELAKEL 86
+A L R+A + +N+ L+Q+ E YY + + +R KD P + K+QE+ K L
Sbjct: 16 SAYPLDRSARDEDSNMDLLQDYLEKYYDLGKEMRQYVRR----KDSGPIVKKIQEMQKFL 71
Query: 87 GV 88
G+
Sbjct: 72 GL 73
>sp|P08254|MMP3_HUMAN Stromelysin-1 OS=Homo sapiens GN=MMP3 PE=1 SV=2
Length = 477
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 26 LATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH-PTILKMQELAK 84
+ +A L AA G+ ++ L+Q+ E YY + + F +R KD P + K++E+ K
Sbjct: 14 VCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRR----KDSGPVVKKIREMQK 69
Query: 85 ELGV 88
LG+
Sbjct: 70 FLGL 73
>sp|B5Z8N3|AMIF_HELPG Formamidase OS=Helicobacter pylori (strain G27) GN=amiF PE=3 SV=1
Length = 334
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGKIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKV 145
YRK P P E +Y PGD G V
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPV 152
>sp|O25836|AMIF_HELPY Formamidase OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=amiF PE=1 SV=1
Length = 334
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKV 145
YRK P P E +Y PGD G V
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPV 152
>sp|B2UV01|AMIF_HELPS Formamidase OS=Helicobacter pylori (strain Shi470) GN=amiF PE=3
SV=1
Length = 334
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGKIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKV 145
YRK P P E +Y PGD G V
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPV 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,458,959
Number of Sequences: 539616
Number of extensions: 3571478
Number of successful extensions: 6596
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 6569
Number of HSP's gapped (non-prelim): 58
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)