Query 029171
Match_columns 198
No_of_seqs 159 out of 1177
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 13:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bbo_J Ribosomal protein L9; l 100.0 4.5E-66 1.5E-70 431.2 -0.6 193 6-198 4-197 (197)
2 1div_A Ribosomal protein L9; r 100.0 1.7E-53 5.6E-58 342.1 16.5 146 51-197 1-147 (149)
3 1nkw_F 50S ribosomal protein L 100.0 7E-52 2.4E-56 331.6 18.3 143 51-197 1-144 (146)
4 3r8s_H 50S ribosomal protein L 100.0 9.7E-53 3.3E-57 337.6 12.6 146 51-197 1-148 (149)
5 3v2d_I 50S ribosomal protein L 100.0 1.2E-52 4E-57 336.8 12.7 145 51-197 1-146 (148)
6 2hba_A BL17, 50S ribosomal pro 99.9 5.1E-28 1.7E-32 162.2 3.9 51 51-101 1-51 (52)
7 3bbo_G Ribosomal protein L4; l 65.7 2.6 9E-05 36.6 2.0 70 1-74 1-73 (293)
8 3ghd_A A cystathionine beta-sy 48.8 5.7 0.0002 26.3 1.0 24 137-161 31-54 (70)
9 3kxr_A Magnesium transporter, 44.3 20 0.00067 28.2 3.7 26 135-160 154-179 (205)
10 2p9m_A Hypothetical protein MJ 43.5 28 0.00095 24.4 4.1 22 135-156 116-137 (138)
11 3jtf_A Magnesium and cobalt ef 41.7 28 0.00096 24.4 3.9 22 135-156 106-127 (129)
12 2ef7_A Hypothetical protein ST 41.0 20 0.00068 25.1 3.0 22 135-156 105-126 (133)
13 3hf7_A Uncharacterized CBS-dom 40.4 20 0.00069 25.4 3.0 21 135-155 107-127 (130)
14 3k6e_A CBS domain protein; str 39.7 19 0.00067 26.8 2.9 24 134-157 121-144 (156)
15 3gby_A Uncharacterized protein 39.2 16 0.00054 25.6 2.2 22 135-156 106-127 (128)
16 3lqn_A CBS domain protein; csg 38.6 19 0.00065 25.8 2.6 23 135-157 123-145 (150)
17 3kpb_A Uncharacterized protein 37.6 16 0.00054 25.1 2.0 21 135-155 100-120 (122)
18 2yzi_A Hypothetical protein PH 37.4 14 0.00048 26.1 1.7 23 136-158 110-132 (138)
19 3i8n_A Uncharacterized protein 36.5 23 0.00079 24.9 2.8 20 135-154 109-128 (130)
20 2nyc_A Nuclear protein SNF4; b 35.8 25 0.00087 24.6 2.9 22 135-156 121-142 (144)
21 4gqw_A CBS domain-containing p 34.4 32 0.0011 24.3 3.2 22 135-156 123-144 (152)
22 3nqr_A Magnesium and cobalt ef 34.0 24 0.00081 24.7 2.4 20 135-154 106-125 (127)
23 1yav_A Hypothetical protein BS 33.9 61 0.0021 23.4 4.8 23 135-157 122-144 (159)
24 3oco_A Hemolysin-like protein 32.9 26 0.00089 25.4 2.6 22 135-156 123-144 (153)
25 3a1y_A 50S ribosomal protein P 32.2 16 0.00054 23.9 1.1 25 143-168 16-40 (58)
26 2emq_A Hypothetical conserved 32.2 57 0.0019 23.3 4.4 23 135-157 119-141 (157)
27 1q1v_A DEK protein; winged-hel 31.5 21 0.00072 24.2 1.7 24 142-165 31-55 (70)
28 3sl7_A CBS domain-containing p 31.4 42 0.0014 24.5 3.6 22 135-156 136-157 (180)
29 2amw_A Hypothetical protein NE 31.2 16 0.00055 24.3 1.0 33 143-175 39-71 (83)
30 1o50_A CBS domain-containing p 31.1 32 0.0011 25.0 2.8 22 135-156 133-154 (157)
31 3lv9_A Putative transporter; C 30.6 34 0.0012 24.4 2.9 22 135-156 125-146 (148)
32 2lbf_B 60S acidic ribosomal pr 30.6 19 0.00064 24.6 1.3 25 143-168 18-42 (70)
33 2lki_A Putative uncharacterize 30.5 15 0.00052 26.4 0.9 33 143-175 61-93 (105)
34 3ctu_A CBS domain protein; str 30.5 24 0.00083 25.5 2.0 23 135-157 122-144 (156)
35 3ocm_A Putative membrane prote 30.3 32 0.0011 26.0 2.8 22 135-156 137-158 (173)
36 3lfr_A Putative metal ION tran 29.6 17 0.00057 26.0 0.9 22 135-156 107-128 (136)
37 1dv5_A APO-DCP, APO-D-alanyl c 29.6 16 0.00054 24.4 0.8 34 142-175 37-70 (80)
38 2lbf_A 60S acidic ribosomal pr 27.9 22 0.00076 24.1 1.3 25 143-168 22-46 (69)
39 1neu_A Myelin P0 protein; stru 27.1 92 0.0032 20.9 4.6 32 166-197 83-119 (124)
40 2uv4_A 5'-AMP-activated protei 26.0 41 0.0014 24.2 2.6 20 135-154 131-150 (152)
41 1m2d_A [2Fe-2S] ferredoxin; th 25.7 36 0.0012 24.3 2.2 21 136-156 69-89 (110)
42 3fio_A A cystathionine beta-sy 24.9 24 0.00083 21.9 1.0 19 138-156 32-50 (70)
43 2or8_A Hepatitis A virus cellu 24.6 1.1E+02 0.0036 20.4 4.5 32 166-197 75-111 (116)
44 2pfi_A Chloride channel protei 24.3 45 0.0016 23.9 2.6 23 137-159 129-151 (164)
45 3ry3_A Putative solute-binding 23.5 95 0.0032 27.7 5.0 53 127-185 89-147 (528)
46 3lhh_A CBS domain protein; str 23.4 52 0.0018 24.4 2.8 22 135-156 144-165 (172)
47 2z1c_A Hydrogenase expression/ 22.4 16 0.00056 25.2 -0.3 27 50-80 27-53 (75)
48 1g6u_A Domain swapped dimer; d 21.1 1.5E+02 0.0053 18.2 4.3 27 90-116 18-44 (48)
49 3fhm_A Uncharacterized protein 20.3 69 0.0024 23.4 2.9 22 135-156 65-86 (165)
50 1eaj_A Coxsackie virus and ade 20.2 1.7E+02 0.0058 19.1 4.8 31 166-196 91-124 (126)
No 1
>3bbo_J Ribosomal protein L9; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=100.00 E-value=4.5e-66 Score=431.23 Aligned_cols=193 Identities=73% Similarity=1.094 Sum_probs=143.0
Q ss_pred ccccccccccCcc-ccccCCCcccccccCCCceEEEEeeecccCCceEEEEccccccccCCCcEEEeCCcccccccccCC
Q 029171 6 STAATLSWSSSSF-FQTFGNTVNESVKLPDKRSALLVLAQKKAKKTRKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMG 84 (198)
Q Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~kk~kk~mkVIL~edV~~LGk~GdiV~Vk~GyARNfLiP~g 84 (198)
||+++|||+|++| .++|.++.+++++++||+++++++++++++++|+|||++||+|||++||+|+|++|||||||||+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvv~~~k~~~k~MkVILledV~~LGk~GdvV~Vk~GYARNfLiP~g 83 (197)
T 3bbo_J 4 STALSLSWSSSPCWSHSFNGGANETLKVSERRFNFEVVSQKKAKKLRKVILKEDVTDLGKQGQLLDVKAGFFRNFLLPTG 83 (197)
T ss_dssp ----------------------------------------------CCCCCCSCSSSSCSSCCCSCCCSSSCCCCCTTTT
T ss_pred hhhcccCCCcCcchhhccccCccccccCCCCceEEEEEeccccCCceEEEEcccccccCCCCCEEEEcCcceeehcccCC
Confidence 8999999999998 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeccCHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCCceeeccCHHHHHHHHHHhcCCceecc
Q 029171 85 KAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKK 164 (198)
Q Consensus 85 lA~~aT~~nlk~~~~~~~~~e~~~~~~~~~a~~~~~~L~~~~~l~i~~k~g~~gklfGSVt~~dI~~~l~~~~gi~Idk~ 164 (198)
+|++||++|+++++.+++++++++++.+++|++++++|++.+.|+|.+++|++|+||||||++||+++|++++|++||++
T Consensus 84 lAv~AT~~nlk~~e~~~~~~e~~~~~~~~~A~~la~~L~~~~~v~i~~kaGe~GkLFGSVT~~dIa~al~~~~Gi~Idk~ 163 (197)
T 3bbo_J 84 KAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLAMVFQTVGAFKVKRKGGKGKLIFGSVTAQDLVDIIKSQLQKDIDKR 163 (197)
T ss_dssp CCCCCCHHHHHHHHTTTHHHHGGGTTTTHHHHTHHHHSSSCCCCBCCCCBCTTSSBSSCCSSHHHHGGGTSSSSCCCCST
T ss_pred ceecCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEeCCCCcEecccCHHHHHHHHHHhhCCeeeee
Confidence 99999999999999999999998889999999999999996249999999999999999999999999999999999999
Q ss_pred eecccCccceeeEEEEEEeCCCcEEEEEEEEeeC
Q 029171 165 IVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 198 (198)
Q Consensus 165 ~I~l~~Ik~~G~y~V~V~L~~~v~a~i~v~V~~~ 198 (198)
.|.||+||++|+|+|+|+||+||+++|+|+|.+|
T Consensus 164 ~I~L~~IK~lG~y~V~VkLh~eV~a~i~V~V~~~ 197 (197)
T 3bbo_J 164 LVSLPEIRETGEYIAELKLHPDVTARVKINVFAN 197 (197)
T ss_dssp TCCSCCCSSSSCEEECCCCBTTBCCCEEEBCCCC
T ss_pred EEEeccccceEEEEEEEEECCCcEEEEEEEEEeC
Confidence 9999889999999999999999999999999875
No 2
>1div_A Ribosomal protein L9; rRNA-binding; 2.60A {Geobacillus stearothermophilus} SCOP: d.99.1.1 d.100.1.1 PDB: 1giy_K 1yl3_K 2b66_I 2b9n_I 2b9p_I 487d_K
Probab=100.00 E-value=1.7e-53 Score=342.11 Aligned_cols=146 Identities=31% Similarity=0.522 Sum_probs=142.9
Q ss_pred eEEEEccccccccCCCcEEEeCCcccccccccCCceeccCHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEE
Q 029171 51 RKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKV 130 (198)
Q Consensus 51 mkVIL~edV~~LGk~GdiV~Vk~GyARNfLiP~glA~~aT~~nlk~~~~~~~~~e~~~~~~~~~a~~~~~~L~~~~~l~i 130 (198)
|+|||++||++||++||+|+|++|||||||||+|+|++||++|+++++.+++++++++++.+++|++++++|++. .++|
T Consensus 1 MkVILl~dV~~LG~~GdvV~Vk~GYaRNfLiP~glA~~AT~~n~~~~e~~~~~~~~~~~~~~~~A~~~a~~L~~~-~v~i 79 (149)
T 1div_A 1 MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKL-TVTI 79 (149)
T ss_dssp CEEEECSBSSSBGGGTEEEECCTTHHHHTTTTTTSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEE
T ss_pred CEEEEcccccccCCCCCEEEEcCCceeeeeccCCceecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-eEEE
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999998 7999
Q ss_pred EEecCCCCceeeccCHHHHHHHHHHhcCCceecceecccC-ccceeeEEEEEEeCCCcEEEEEEEEee
Q 029171 131 KRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE-IRETGEYIAQLKLHPEVTARIRLNVFA 197 (198)
Q Consensus 131 ~~k~g~~gklfGSVt~~dI~~~l~~~~gi~Idk~~I~l~~-Ik~~G~y~V~V~L~~~v~a~i~v~V~~ 197 (198)
.+++|++|+||||||++||+++|.+++|++||++.|.||+ ||++|+|+|+|+||++|+++|+|+|.+
T Consensus 80 ~~k~g~~gklfGSVt~~dIa~al~~~~g~~idk~~I~l~~~Ik~~G~~~v~vkLh~~V~a~i~v~V~~ 147 (149)
T 1div_A 80 PAKAGEGGRLFGSITSKQIAESLQAQHGLKLDKRKIELADAIRALGYTNVPVKLHPEVTATLKVHVTE 147 (149)
T ss_dssp EECBCGGGEEEEEECHHHHHHHHHHHHCCCCCGGGBCCCSCEEESEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEeCCCCcEEeecCHHHHHHHHHHhhCCeechheEECCCCccccEEEEEEEEECCCCEEEEEEEEEe
Confidence 9999999999999999999999999999999999999987 999999999999999999999999986
No 3
>1nkw_F 50S ribosomal protein L9; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_F* 1nwy_F* 1sm1_F* 1xbp_F* 1pnu_F 1pny_F 1vor_I 1vou_I 1vow_I 1voy_I 1vp0_I
Probab=100.00 E-value=7e-52 Score=331.64 Aligned_cols=143 Identities=36% Similarity=0.571 Sum_probs=139.9
Q ss_pred eEEEEccccccccCCCcEEEeCCcccccccccCCceeccCHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEE
Q 029171 51 RKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKV 130 (198)
Q Consensus 51 mkVIL~edV~~LGk~GdiV~Vk~GyARNfLiP~glA~~aT~~nlk~~~~~~~~~e~~~~~~~~~a~~~~~~L~~~~~l~i 130 (198)
|+|||++| ++||++||+|+|++|||||||||+|+|++||++|+++++.+++++++++++.+++|++++++|++. .++|
T Consensus 1 MkVIL~~d-~~LG~~GdvV~Vk~GYaRNfLiP~glA~~AT~~n~~~~e~~~~~~~~~~~~~~~~A~~~a~~L~~~-~v~i 78 (146)
T 1nkw_F 1 MQVILLEP-SRLGKTGEVVSVKDGYARNWLIPQGLAVSATRTNMKTLEAQLRSIEKRQAQEKAVAEDLASRLNGV-AVEL 78 (146)
T ss_pred CeEEEeec-CCCCCCCCEEEEcCcceehhcccCCceecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-EEEE
Confidence 89999999 999999999999999999999999999999999999999999999999999999999999999997 7999
Q ss_pred EEecCCCCceeeccCHHHHHHHHHHhcCCceecceecccC-ccceeeEEEEEEeCCCcEEEEEEEEee
Q 029171 131 KRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE-IRETGEYIAQLKLHPEVTARIRLNVFA 197 (198)
Q Consensus 131 ~~k~g~~gklfGSVt~~dI~~~l~~~~gi~Idk~~I~l~~-Ik~~G~y~V~V~L~~~v~a~i~v~V~~ 197 (198)
.+++| +|+||||||++||+++|.++ |++||++.|.||+ |+++|+|+|+|+||++|+++|+|+|.+
T Consensus 79 ~~k~g-~gklfGSVt~~dIa~al~~~-g~~idk~~I~l~~~Ik~~G~~~v~vkLh~~V~a~i~v~V~~ 144 (146)
T 1nkw_F 79 SVRAG-EGKIYGAVTHQDVANSLDQL-GFDVDRRKIDMPKTVKEVGEYDIAYRAHPEVTIPMKLVVHA 144 (146)
T ss_pred EEEcC-CCceeeccCHHHHHHHHHHc-CCeechheEECCCcccccEEEEEEEEECCCCEEEEEEEEEe
Confidence 99999 99999999999999999999 9999999999987 999999999999999999999999986
No 4
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=100.00 E-value=9.7e-53 Score=337.63 Aligned_cols=146 Identities=33% Similarity=0.501 Sum_probs=141.0
Q ss_pred eEEEEccccccccCCCcEEEeCCcccccccccCCceeccCHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEE
Q 029171 51 RKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKV 130 (198)
Q Consensus 51 mkVIL~edV~~LGk~GdiV~Vk~GyARNfLiP~glA~~aT~~nlk~~~~~~~~~e~~~~~~~~~a~~~~~~L~~~~~l~i 130 (198)
|+|||++||++||++||+|+|++|||||||||+|+|++||++|+++++.+++++++++++.+++|++++++|++...++|
T Consensus 1 MkVIL~~dV~~LG~~GdvV~Vk~GYaRNfLiP~glA~~AT~~n~k~~e~~~~~~~~~~~~~~~~A~~~~~~L~~~~~v~i 80 (149)
T 3r8s_H 1 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTI 80 (149)
T ss_dssp CCCEESSCCTTTCCSSCBCCCCHHHHTTTTSSSSSEECCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEecccccCCCCCCEEEEcCcceehhhccCCceeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999536999
Q ss_pred EEecCCCCceeeccCHHHHHHHHHHhcCCceecceecccC--ccceeeEEEEEEeCCCcEEEEEEEEee
Q 029171 131 KRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE--IRETGEYIAQLKLHPEVTARIRLNVFA 197 (198)
Q Consensus 131 ~~k~g~~gklfGSVt~~dI~~~l~~~~gi~Idk~~I~l~~--Ik~~G~y~V~V~L~~~v~a~i~v~V~~ 197 (198)
.+++|++|+||||||++||+++|+++ |++||++.|.||+ ||++|+|+|+|+||++|+++|+|+|++
T Consensus 81 ~~k~g~~gklfGSVt~~dIa~al~~~-g~~idk~~I~l~~~pIk~~G~~~v~v~Lh~~V~a~i~v~V~~ 148 (149)
T 3r8s_H 81 ASKAGDEGKLFGSIGTRDIADAVTAA-GVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVA 148 (149)
T ss_dssp EECBCTTSEEEEEECHHHHHHHHHTT-SCCCCTTSEECSSCCEEESEEEEEEECSSSSCCCCEEEEEEE
T ss_pred EEEcCCCCceEcccCHHHHHHHHHHc-CCceehheEEcCCccccceEEEEEEEEECCCCEEEEEEEEEE
Confidence 99999999999999999999999988 9999999999974 999999999999999999999999986
No 5
>3v2d_I 50S ribosomal protein L9; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2j03_I 2jl6_I 2jl8_I 2v47_I 2v49_I 2wdi_I 2wdj_I 2wdl_I 2wdn_I 2wh2_I 2x9s_I 2x9u_I 2xg0_I 2xg2_I 3hux_I 3huz_I 3i8f_K 3i8i_K 3i9c_K 3i9e_K ...
Probab=100.00 E-value=1.2e-52 Score=336.82 Aligned_cols=145 Identities=36% Similarity=0.570 Sum_probs=141.4
Q ss_pred eEEEEccccccccCCCcEEEeCCcccccccccCCceeccCHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEE
Q 029171 51 RKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKV 130 (198)
Q Consensus 51 mkVIL~edV~~LGk~GdiV~Vk~GyARNfLiP~glA~~aT~~nlk~~~~~~~~~e~~~~~~~~~a~~~~~~L~~~~~l~i 130 (198)
|+|||++||+|||++||+|+|++|||||||||+|+|++||++|+++++.+++++++++++.+++|++++++|++. .++|
T Consensus 1 MkVILl~dV~~LG~~GdvV~Vk~GYaRNfLiP~g~A~~AT~~n~k~~e~~~~~~~~~~~~~~~~A~~~~~~L~~~-~v~i 79 (148)
T 3v2d_I 1 MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAERKAEAERLKEILENL-TLTI 79 (148)
T ss_dssp CEEEESSCBTTTBSTTCEEECCHHHHHHTTGGGTSEEECCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHSSSC-CEEE
T ss_pred CeEEEccccccCCCCccEEEEcCCceehhhcccCchhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-EEEE
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999998 7999
Q ss_pred EEecCCCCceeeccCHHHHHHHHHHhcCCceecceecccC-ccceeeEEEEEEeCCCcEEEEEEEEee
Q 029171 131 KRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE-IRETGEYIAQLKLHPEVTARIRLNVFA 197 (198)
Q Consensus 131 ~~k~g~~gklfGSVt~~dI~~~l~~~~gi~Idk~~I~l~~-Ik~~G~y~V~V~L~~~v~a~i~v~V~~ 197 (198)
.+++|++ +||||||++||+++|.+++|++||++.|.||+ ||++|+|+|+|+||++|+++|+|+|.+
T Consensus 80 ~~kag~~-kLfGSVt~~dIa~al~~~~g~~idk~~I~l~~pIk~~G~~~v~v~Lh~~V~a~i~v~V~~ 146 (148)
T 3v2d_I 80 PVRAGET-KIYGSVTAKDIAEALSRQHGVTIDPKRLALEKPIKELGEYVLTYKPHPEVPIQLKVSVVA 146 (148)
T ss_dssp ECCBSSS-SBSSCBCHHHHHHHHTTTTCCCCCTTSSCCSSCBCSCEEEEEECCSBTTBCCEEEEEEEC
T ss_pred EEEcCCC-ccccccCHHHHHHHHHHhcCCCcchheEEcCchhhceEEEEEEEEECCCcEEEEEEEEEe
Confidence 9999999 99999999999999999889999999999997 999999999999999999999999985
No 6
>2hba_A BL17, 50S ribosomal protein L9; NTL9, K12M, RNA binding protein; 1.25A {Geobacillus stearothermophilus} SCOP: d.100.1.1 PDB: 1cqu_A 2hbb_A 2hvf_A
Probab=99.94 E-value=5.1e-28 Score=162.19 Aligned_cols=51 Identities=35% Similarity=0.582 Sum_probs=49.3
Q ss_pred eEEEEccccccccCCCcEEEeCCcccccccccCCceeccCHHHHHHhHHHH
Q 029171 51 RKIILKEDVAELGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEE 101 (198)
Q Consensus 51 mkVIL~edV~~LGk~GdiV~Vk~GyARNfLiP~glA~~aT~~nlk~~~~~~ 101 (198)
|+|||++||++||++||+|+|++|||||||||+|+|++||++|+++++.++
T Consensus 1 MkVIL~~dV~~lG~~Gdvv~V~~GYaRN~LiP~g~A~~AT~~n~~~~~~~~ 51 (52)
T 2hba_A 1 MKVIFLKDVKGMGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQK 51 (52)
T ss_dssp CEEEESSCBTTTBCTTCEEECCHHHHHHTTTTTTSEEECCHHHHHHHHHHH
T ss_pred CEEEEcccccccCcCCCEEEEcCCceehhhccCCceeeCCHHHHHHHHHhh
Confidence 899999999999999999999999999999999999999999999998765
No 7
>3bbo_G Ribosomal protein L4; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=65.74 E-value=2.6 Score=36.57 Aligned_cols=70 Identities=24% Similarity=0.249 Sum_probs=10.0
Q ss_pred CCCCcccccccccccCcccc--ccCCCcccccccCCCceEEEEeeecccCCce-EEEEccccccccCCCcEEEeCCc
Q 029171 1 MAASSSTAATLSWSSSSFFQ--TFGNTVNESVKLPDKRSALLVLAQKKAKKTR-KIILKEDVAELGKKGQLLDVKAG 74 (198)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~kk~kk~m-kVIL~edV~~LGk~GdiV~Vk~G 74 (198)
||+|.++.+.|++.||+... ++....+.+..++.|++...-..-.. ...| +|-+. |..| ...| .|++.+-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~M~~v~V~-~~~G-~~~g-~veLp~~ 73 (293)
T 3bbo_G 1 MATSTSSSLSLSFFSSSLFSSKSRNFSSKPILKLPSSSHSQTSLSLSI-KSELIPLPIL-NFSG-EKVG-ETFLNLK 73 (293)
T ss_dssp ---------------------------------------------------CCEEEECC-CSSS-CCCS-EEEECSS
T ss_pred CCccccCcceeeeeeccccccCccccCccchhhcCCCCCcccccccch-hhcCceeEEE-cCCC-CEee-eEEcCHH
Confidence 88887777788988887632 22223333333444444443322223 3335 44332 3443 2334 6777743
No 8
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=48.76 E-value=5.7 Score=26.33 Aligned_cols=24 Identities=33% Similarity=0.659 Sum_probs=18.8
Q ss_pred CCceeeccCHHHHHHHHHHhcCCce
Q 029171 137 GKQIFGSVTAQDVVDIIKAQLQRDV 161 (198)
Q Consensus 137 ~gklfGSVt~~dI~~~l~~~~gi~I 161 (198)
+|++.|.||..||...+..+ |.+.
T Consensus 31 ~~~lvGIvT~~Di~~~~~~~-~~~~ 54 (70)
T 3ghd_A 31 GDEILGVVTERDILDKVVAK-GKNP 54 (70)
T ss_dssp TTEEEEEEEHHHHHHHTTTT-TCCG
T ss_pred CCEEEEEEEHHHHHHHHHhc-CCCc
Confidence 57999999999999877655 5443
No 9
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=44.26 E-value=20 Score=28.23 Aligned_cols=26 Identities=12% Similarity=0.378 Sum_probs=20.9
Q ss_pred CCCCceeeccCHHHHHHHHHHhcCCc
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQLQRD 160 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~~gi~ 160 (198)
.++|++-|.||..||.+.+.+...-+
T Consensus 154 D~~g~lvGiIT~~Dil~~i~~e~~ed 179 (205)
T 3kxr_A 154 DDAGELIGRVTLRAATALVREHYEAQ 179 (205)
T ss_dssp CTTSBEEEEEEHHHHHHHHHHHHC--
T ss_pred cCCCeEEEEEEHHHHHHHHHHHHHHH
Confidence 56789999999999999998775433
No 10
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=43.46 E-value=28 Score=24.37 Aligned_cols=22 Identities=18% Similarity=0.437 Sum_probs=18.7
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++.|.||..||.+.+.++
T Consensus 116 d~~g~~~Giit~~dll~~~~~~ 137 (138)
T 2p9m_A 116 DKNNKLVGIISDGDIIRTISKI 137 (138)
T ss_dssp CTTSBEEEEEEHHHHHHHHHHC
T ss_pred CCCCeEEEEEEHHHHHHHHHhh
Confidence 3578999999999999988754
No 11
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=41.71 E-value=28 Score=24.42 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=18.0
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.++|...
T Consensus 106 d~~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 106 DEHGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp CC-CCEEEEEEHHHHHHHHHHT
T ss_pred eCCCCEEEEEEHHHHHHHHhCC
Confidence 4568999999999999998653
No 12
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=41.02 E-value=20 Score=25.09 Aligned_cols=22 Identities=14% Similarity=0.283 Sum_probs=19.3
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++.|.||..||.+.+.+.
T Consensus 105 d~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 105 DDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp CTTSCEEEEEEHHHHHHHHHHH
T ss_pred CCCCeEEEEEEHHHHHHHHHHH
Confidence 3568999999999999999876
No 13
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=40.36 E-value=20 Score=25.39 Aligned_cols=21 Identities=29% Similarity=0.368 Sum_probs=18.3
Q ss_pred CCCCceeeccCHHHHHHHHHH
Q 029171 135 GKGKQIFGSVTAQDVVDIIKA 155 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~ 155 (198)
.++|++-|.||..||.++|..
T Consensus 107 d~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 107 DEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp CTTSCEEEEEEHHHHHHHHHC
T ss_pred cCCCCEEEEeeHHHHHHHHhC
Confidence 467899999999999999864
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=39.67 E-value=19 Score=26.78 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=21.0
Q ss_pred cCCCCceeeccCHHHHHHHHHHhc
Q 029171 134 GGKGKQIFGSVTAQDVVDIIKAQL 157 (198)
Q Consensus 134 ~g~~gklfGSVt~~dI~~~l~~~~ 157 (198)
+.++|++-|.||..||.+++....
T Consensus 121 Vd~~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 121 VDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp ECTTSBEEEEEEHHHHHHHHHHHS
T ss_pred EecCCEEEEEEEHHHHHHHHHHHh
Confidence 467899999999999999998763
No 15
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=39.22 E-value=16 Score=25.65 Aligned_cols=22 Identities=9% Similarity=0.277 Sum_probs=19.0
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++.|.||..||.+.+.+.
T Consensus 106 d~~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 106 DEDGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp CTTCBEEEEEEHHHHHHHHHTT
T ss_pred CCCCCEEEEEEHHHHHHHHHhh
Confidence 4678999999999999998754
No 16
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=38.57 E-value=19 Score=25.84 Aligned_cols=23 Identities=9% Similarity=0.297 Sum_probs=20.1
Q ss_pred CCCCceeeccCHHHHHHHHHHhc
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQL 157 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~~ 157 (198)
.++|++-|.||..||.+.+.+.+
T Consensus 123 d~~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 123 NEDGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp CTTCBEEEEEEHHHHHHHHHHHC
T ss_pred CCCCcEEEEEEHHHHHHHHHHHh
Confidence 46789999999999999998763
No 17
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=37.62 E-value=16 Score=25.10 Aligned_cols=21 Identities=19% Similarity=0.433 Sum_probs=17.5
Q ss_pred CCCCceeeccCHHHHHHHHHH
Q 029171 135 GKGKQIFGSVTAQDVVDIIKA 155 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~ 155 (198)
.++|++.|.||..||.+.+.+
T Consensus 100 d~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 100 DDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp CTTCBEEEEEEHHHHHHHHC-
T ss_pred CCCCCEEEEEeHHHHHHHhhc
Confidence 356899999999999998864
No 18
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=37.41 E-value=14 Score=26.09 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=19.4
Q ss_pred CCCceeeccCHHHHHHHHHHhcC
Q 029171 136 KGKQIFGSVTAQDVVDIIKAQLQ 158 (198)
Q Consensus 136 ~~gklfGSVt~~dI~~~l~~~~g 158 (198)
++|++-|.||..||.+.+.++..
T Consensus 110 ~~g~~~Giit~~dil~~~~~~~~ 132 (138)
T 2yzi_A 110 EEGKIVGIFTLSDLLEASRRRLE 132 (138)
T ss_dssp ETTEEEEEEEHHHHHHHHHCCSC
T ss_pred CCCCEEEEEEHHHHHHHHHHHHH
Confidence 46799999999999999987643
No 19
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=36.54 E-value=23 Score=24.86 Aligned_cols=20 Identities=20% Similarity=0.363 Sum_probs=17.5
Q ss_pred CCCCceeeccCHHHHHHHHH
Q 029171 135 GKGKQIFGSVTAQDVVDIIK 154 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~ 154 (198)
.++|++-|.||..||.++|.
T Consensus 109 d~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 109 DEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp CTTSCEEEEEEHHHHHHHHH
T ss_pred cCCCCEEEEEEHHHHHHHHc
Confidence 46789999999999999875
No 20
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=35.79 E-value=25 Score=24.64 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=18.7
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||...+.++
T Consensus 121 d~~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 121 DDVGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp CTTSBEEEEEEHHHHHHHHHHC
T ss_pred CCCCCEEEEEEHHHHHHHHHhc
Confidence 3568999999999999998754
No 21
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=34.36 E-value=32 Score=24.27 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=18.6
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.+.+.+.
T Consensus 123 d~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 123 DSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp CTTSBEEEEEEHHHHHHHHHC-
T ss_pred CCCCcEEEEEEHHHHHHHHHhc
Confidence 4578999999999999999754
No 22
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=34.03 E-value=24 Score=24.70 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=16.8
Q ss_pred CCCCceeeccCHHHHHHHHH
Q 029171 135 GKGKQIFGSVTAQDVVDIIK 154 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~ 154 (198)
.++|++-|.||..||.++|.
T Consensus 106 d~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 106 DEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp CTTSCEEEEEEHHHHHHHC-
T ss_pred eCCCCEEEEEEHHHHHHHHh
Confidence 46789999999999998864
No 23
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=33.86 E-value=61 Score=23.37 Aligned_cols=23 Identities=13% Similarity=0.187 Sum_probs=19.7
Q ss_pred CCCCceeeccCHHHHHHHHHHhc
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQL 157 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~~ 157 (198)
.++|++.|.||..||.+.+.+++
T Consensus 122 d~~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 122 NDEQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp CTTCBEEEEEEHHHHHHHHHHHC
T ss_pred eCCCeEEEEEEHHHHHHHHHHHH
Confidence 34789999999999999998764
No 24
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=32.93 E-value=26 Score=25.43 Aligned_cols=22 Identities=18% Similarity=0.170 Sum_probs=18.5
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.++|...
T Consensus 123 d~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 123 DEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp CTTSCEEEEECHHHHHHHHHC-
T ss_pred eCCCCEEEEeeHHHHHHHHhcc
Confidence 4578999999999999999754
No 25
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=32.23 E-value=16 Score=23.95 Aligned_cols=25 Identities=4% Similarity=0.248 Sum_probs=21.6
Q ss_pred ccCHHHHHHHHHHhcCCceecceecc
Q 029171 143 SVTAQDVVDIIKAQLQRDVDKKIVDL 168 (198)
Q Consensus 143 SVt~~dI~~~l~~~~gi~Idk~~I~l 168 (198)
++|.++|...|+.- |+++|..++.+
T Consensus 16 ~~t~~~I~~il~aa-Gveve~~~~~~ 40 (58)
T 3a1y_A 16 EINEENLKAVLQAA-GVEPEEARIKA 40 (58)
T ss_dssp CCCHHHHHHHHHHT-TCCCCHHHHHH
T ss_pred CCCHHHHHHHHHHc-CCCccHHHHHH
Confidence 79999999999876 99999887653
No 26
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=32.19 E-value=57 Score=23.30 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=19.8
Q ss_pred CCCCceeeccCHHHHHHHHHHhc
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQL 157 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~~ 157 (198)
.++|++.|.||..||...+....
T Consensus 119 d~~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 119 NDDGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp CSSSSEEEEEEHHHHHHHHHHTT
T ss_pred cCCCeEEEEEEHHHHHHHHHHHh
Confidence 45689999999999999998763
No 27
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=31.53 E-value=21 Score=24.23 Aligned_cols=24 Identities=13% Similarity=0.234 Sum_probs=20.9
Q ss_pred eccCHHHHHHHHHHhc-CCceecce
Q 029171 142 GSVTAQDVVDIIKAQL-QRDVDKKI 165 (198)
Q Consensus 142 GSVt~~dI~~~l~~~~-gi~Idk~~ 165 (198)
-+||.++|...|.++| |+++..++
T Consensus 31 ~tvT~K~VR~~Le~~~pg~dLs~kK 55 (70)
T 1q1v_A 31 EEVTMKQICKKVYENYPTYDLTERK 55 (70)
T ss_dssp GGCCHHHHHHHHHHHCSSSCCSHHH
T ss_pred HHHhHHHHHHHHHHHccCCCChHHH
Confidence 5799999999999999 99887654
No 28
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=31.44 E-value=42 Score=24.50 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=19.1
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.+.+.+.
T Consensus 136 d~~g~~vGiit~~dil~~~~~~ 157 (180)
T 3sl7_A 136 DADGKLIGILTRGNVVRAALQI 157 (180)
T ss_dssp CTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCCCeEEEEEEHHHHHHHHHHH
Confidence 4578999999999999998764
No 29
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=31.20 E-value=16 Score=24.34 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=25.4
Q ss_pred ccCHHHHHHHHHHhcCCceecceecccCcccee
Q 029171 143 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETG 175 (198)
Q Consensus 143 SVt~~dI~~~l~~~~gi~Idk~~I~l~~Ik~~G 175 (198)
|+..-+++-.|.++||++|+...+....++++|
T Consensus 39 Sl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~ 71 (83)
T 2amw_A 39 SMAVVNVITALEEYFDFSVDDDEISAQTFETLG 71 (83)
T ss_dssp HHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHH
T ss_pred HHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHH
Confidence 788888899999999999998876543355444
No 30
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=31.14 E-value=32 Score=24.96 Aligned_cols=22 Identities=9% Similarity=0.222 Sum_probs=18.9
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++.|.||..||.+.+.+.
T Consensus 133 d~~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 133 DEKGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp CTTSCEEEEEEHHHHHHHHHHS
T ss_pred cCCCEEEEEEEHHHHHHHHHHh
Confidence 3578999999999999998764
No 31
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=30.59 E-value=34 Score=24.45 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=18.7
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.++|...
T Consensus 125 d~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 125 DEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp CTTSSEEEEEEHHHHHHHHHHT
T ss_pred eCCCCEEEEEEHHHHHHHHhCc
Confidence 4578999999999999998653
No 32
>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A
Probab=30.57 E-value=19 Score=24.59 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=21.5
Q ss_pred ccCHHHHHHHHHHhcCCceecceecc
Q 029171 143 SVTAQDVVDIIKAQLQRDVDKKIVDL 168 (198)
Q Consensus 143 SVt~~dI~~~l~~~~gi~Idk~~I~l 168 (198)
++|++||...|+.- |+++|..++.+
T Consensus 18 ~~ta~~I~~il~aa-Gvevd~~~~~~ 42 (70)
T 2lbf_B 18 SPSAKDIKKILDSV-GIEADDDRLNK 42 (70)
T ss_dssp SCCHHHHHHHHHTT-TCCCCTTHHHH
T ss_pred CCCHHHHHHHHHHc-CCCccHHHHHH
Confidence 79999999999876 99999987753
No 33
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=30.54 E-value=15 Score=26.37 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=26.3
Q ss_pred ccCHHHHHHHHHHhcCCceecceecccCcccee
Q 029171 143 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETG 175 (198)
Q Consensus 143 SVt~~dI~~~l~~~~gi~Idk~~I~l~~Ik~~G 175 (198)
|+..-+++-.|.+.||++|+...+....++++|
T Consensus 61 SL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~ 93 (105)
T 2lki_A 61 SMAVVNVITALEEYFDFSVDDDEISAQTFETLG 93 (105)
T ss_dssp HHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHH
T ss_pred HHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHH
Confidence 788888889999999999998886544466554
No 34
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=30.48 E-value=24 Score=25.48 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=20.2
Q ss_pred CCCCceeeccCHHHHHHHHHHhc
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQL 157 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~~ 157 (198)
.++|++-|.||..||.+.+.+.+
T Consensus 122 d~~g~~~Giit~~dil~~l~~~~ 144 (156)
T 3ctu_A 122 DAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp CTTSBEEEEEETTHHHHHHHHHS
T ss_pred cCCCeEEEEEEHHHHHHHHHHHH
Confidence 46789999999999999998774
No 35
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=30.33 E-value=32 Score=26.00 Aligned_cols=22 Identities=32% Similarity=0.299 Sum_probs=19.1
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.++|...
T Consensus 137 de~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 137 DEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp CTTCCEEEEECHHHHHHHHHCC
T ss_pred eCCCCEEEEEeHHHHHHHHhCc
Confidence 4678999999999999999754
No 36
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=29.59 E-value=17 Score=26.02 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=17.0
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.++|..+
T Consensus 107 d~~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 107 DEYGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp CTTSCEEEEEEHHHHHTTC---
T ss_pred eCCCCEEEEEEHHHHHHHHhCC
Confidence 4678999999999999888654
No 37
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=29.55 E-value=16 Score=24.43 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=26.6
Q ss_pred eccCHHHHHHHHHHhcCCceecceecccCcccee
Q 029171 142 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETG 175 (198)
Q Consensus 142 GSVt~~dI~~~l~~~~gi~Idk~~I~l~~Ik~~G 175 (198)
=|+..-+++-.|.+.||++|+...+....++++|
T Consensus 37 DSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~ 70 (80)
T 1dv5_A 37 DSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPN 70 (80)
T ss_dssp CSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHH
T ss_pred ChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHH
Confidence 4888889999999999999998876544455554
No 38
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=27.92 E-value=22 Score=24.07 Aligned_cols=25 Identities=28% Similarity=0.315 Sum_probs=21.6
Q ss_pred ccCHHHHHHHHHHhcCCceecceecc
Q 029171 143 SVTAQDVVDIIKAQLQRDVDKKIVDL 168 (198)
Q Consensus 143 SVt~~dI~~~l~~~~gi~Idk~~I~l 168 (198)
++|+++|...|+.- |+++|..++.+
T Consensus 22 ~~ta~~I~~il~Aa-Gveve~~~~~l 46 (69)
T 2lbf_A 22 TVTEDKINALIKAA-GVNVEPFWPGL 46 (69)
T ss_dssp CCCHHHHHHHHHHH-TCCCCTHHHHH
T ss_pred CCCHHHHHHHHHHc-CCCccHHHHHH
Confidence 79999999999887 99999987653
No 39
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=27.08 E-value=92 Score=20.90 Aligned_cols=32 Identities=22% Similarity=0.551 Sum_probs=20.9
Q ss_pred ecccC--ccceeeEEEEEEeCCCc---EEEEEEEEee
Q 029171 166 VDLPE--IRETGEYIAQLKLHPEV---TARIRLNVFA 197 (198)
Q Consensus 166 I~l~~--Ik~~G~y~V~V~L~~~v---~a~i~v~V~~ 197 (198)
+.+.+ ...-|.|.|.+.-..+. .+.+.|.|..
T Consensus 83 L~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~ 119 (124)
T 1neu_A 83 IVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFE 119 (124)
T ss_dssp EEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC
T ss_pred EEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEec
Confidence 44444 67899999999977654 6777777753
No 40
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=25.96 E-value=41 Score=24.21 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=17.1
Q ss_pred CCCCceeeccCHHHHHHHHH
Q 029171 135 GKGKQIFGSVTAQDVVDIIK 154 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~ 154 (198)
.++|++-|.||..||.+.|.
T Consensus 131 d~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 131 DENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp CTTSBEEEEEEHHHHHHHHC
T ss_pred CCCCeEEEEEEHHHHHHHHH
Confidence 34689999999999998874
No 41
>1m2d_A [2Fe-2S] ferredoxin; thioredoxin-like fold, [2Fe-2S] cluster, Cys59Ser variant, electron transport; 1.05A {Aquifex aeolicus} SCOP: c.47.1.11 PDB: 1m2a_A 1f37_A 1m2b_A
Probab=25.66 E-value=36 Score=24.25 Aligned_cols=21 Identities=24% Similarity=0.469 Sum_probs=18.1
Q ss_pred CCCceeeccCHHHHHHHHHHh
Q 029171 136 KGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 136 ~~gklfGSVt~~dI~~~l~~~ 156 (198)
.+|.+||-||+++|.+.|.+.
T Consensus 69 P~~~~y~~vt~e~v~~il~~~ 89 (110)
T 1m2d_A 69 PDGVWYGQVKPEDVDEIVEKH 89 (110)
T ss_dssp TTTEEECSCCGGGHHHHHHHT
T ss_pred eCCEEEecCCHHHHHHHHHHH
Confidence 467899999999999999874
No 42
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=24.89 E-value=24 Score=21.85 Aligned_cols=19 Identities=37% Similarity=0.679 Sum_probs=16.8
Q ss_pred CceeeccCHHHHHHHHHHh
Q 029171 138 KQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 138 gklfGSVt~~dI~~~l~~~ 156 (198)
|++.|.||..||...+...
T Consensus 32 ~~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 32 DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp TEEEEEEEHHHHHHHTTTT
T ss_pred CEEEEEEEHHHHHHHHHHc
Confidence 7999999999999988654
No 43
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=24.60 E-value=1.1e+02 Score=20.42 Aligned_cols=32 Identities=13% Similarity=0.231 Sum_probs=23.3
Q ss_pred ecccC--ccceeeEEEEEEeCCC---cEEEEEEEEee
Q 029171 166 VDLPE--IRETGEYIAQLKLHPE---VTARIRLNVFA 197 (198)
Q Consensus 166 I~l~~--Ik~~G~y~V~V~L~~~---v~a~i~v~V~~ 197 (198)
+.+.+ ...-|.|.|.+.-..+ ..+.+.|.|.+
T Consensus 75 L~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 75 LTIENSVESDSGLYCCRVEIPGWFNDQKVTFSLQVKP 111 (116)
T ss_dssp EEESSCCGGGCEEEEEEECCSSTTCCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEcCCcccccEEEEEEEECC
Confidence 44444 6799999999987653 37788888765
No 44
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=24.35 E-value=45 Score=23.90 Aligned_cols=23 Identities=13% Similarity=0.121 Sum_probs=19.7
Q ss_pred CCceeeccCHHHHHHHHHHhcCC
Q 029171 137 GKQIFGSVTAQDVVDIIKAQLQR 159 (198)
Q Consensus 137 ~gklfGSVt~~dI~~~l~~~~gi 159 (198)
+|++-|.||..||.+.+.+..+.
T Consensus 129 ~g~l~Giit~~dil~~~~~~~~~ 151 (164)
T 2pfi_A 129 RGRAVGCVSWVEMKKAISNLTNP 151 (164)
T ss_dssp TTEEEEEEEHHHHHHHHHHHHSC
T ss_pred CCEEEEEEEHHHHHHHHHhhhCC
Confidence 47899999999999999887543
No 45
>3ry3_A Putative solute-binding protein; structural genomics, IDP00509, center for structural genomic infectious diseases, csgid, transport prote; 2.43A {Yersinia pestis}
Probab=23.52 E-value=95 Score=27.74 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=37.1
Q ss_pred eEEEEEecC---CCCceeeccCHHHHHHHHHHhcCCceecceecc---cCccceeeEEEEEEeCC
Q 029171 127 AFKVKRKGG---KGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDL---PEIRETGEYIAQLKLHP 185 (198)
Q Consensus 127 ~l~i~~k~g---~~gklfGSVt~~dI~~~l~~~~gi~Idk~~I~l---~~Ik~~G~y~V~V~L~~ 185 (198)
+++|+.+.| .||. .||++|++-.+.....-. ....+ ..|+.++.|+|+|+|..
T Consensus 89 t~tf~LR~gv~f~DG~---p~TA~DV~~s~~~~~~~~---~~~~~~~i~~v~~~d~~Tv~i~l~~ 147 (528)
T 3ry3_A 89 TWLLTLKPDLKFSDGS---PLTAKDVAFTYNNAAASG---GKVDMGNFLSAEVIDPLNVRIHLKA 147 (528)
T ss_dssp EEEEEECTTCBCTTSC---BCCHHHHHHHHHHHTSSS---CSSCCSSEEEEEEEETTEEEEEESS
T ss_pred EEEEEECCCCEeCCcC---CCCHHHHHHHHHHHHhcc---cccccccceEEEEecCCEEEEEECC
Confidence 788888765 4665 699999999998653211 11112 23788999999999874
No 46
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=23.37 E-value=52 Score=24.39 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=18.9
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++-|.||..||.++|...
T Consensus 144 d~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 144 DEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp CTTSCEEEEEEHHHHHHHHHTT
T ss_pred eCCCCEEEEeeHHHHHHHHhCC
Confidence 4568999999999999999754
No 47
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=22.36 E-value=16 Score=25.23 Aligned_cols=27 Identities=30% Similarity=0.374 Sum_probs=20.8
Q ss_pred ceEEEEccccccccCCCcEEEeCCccccccc
Q 029171 50 TRKIILKEDVAELGKKGQLLDVKAGFYRNYL 80 (198)
Q Consensus 50 ~mkVIL~edV~~LGk~GdiV~Vk~GyARNfL 80 (198)
.+.+-|..|+ ..||.|-|..|||.+-+
T Consensus 27 ~V~l~Lv~~~----~vGD~VLVH~GfAi~~i 53 (75)
T 2z1c_A 27 EVRLDLMPDT----KPGDWVIVHTGFAIEKL 53 (75)
T ss_dssp EEECTTSTTC----CTTCEEEEETTEEEEEE
T ss_pred EEEEEEeCCC----CCCCEEEEecchhhhhC
Confidence 4555566664 68999999999999754
No 48
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=21.10 E-value=1.5e+02 Score=18.15 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=16.6
Q ss_pred CHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 029171 90 TPLLLKEMKMEEERIEAEKKRVKEEAQ 116 (198)
Q Consensus 90 T~~nlk~~~~~~~~~e~~~~~~~~~a~ 116 (198)
+|+.++.++.+....+++.+..+...|
T Consensus 18 speelaaleselqalekklaalksklq 44 (48)
T 1g6u_A 18 SPEELAALESELQALEKKLAALKSKLQ 44 (48)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788777776666665444444333
No 49
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=20.26 E-value=69 Score=23.35 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=18.8
Q ss_pred CCCCceeeccCHHHHHHHHHHh
Q 029171 135 GKGKQIFGSVTAQDVVDIIKAQ 156 (198)
Q Consensus 135 g~~gklfGSVt~~dI~~~l~~~ 156 (198)
.++|++.|.||..||...+...
T Consensus 65 d~~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 65 DADGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp CTTSCEEEEEEHHHHHHHHHHH
T ss_pred cCCCeEEEEEEHHHHHHHHHhc
Confidence 3578999999999999988764
No 50
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=20.18 E-value=1.7e+02 Score=19.08 Aligned_cols=31 Identities=26% Similarity=0.582 Sum_probs=22.6
Q ss_pred ecccC--ccceeeEEEEEEeCCCc-EEEEEEEEe
Q 029171 166 VDLPE--IRETGEYIAQLKLHPEV-TARIRLNVF 196 (198)
Q Consensus 166 I~l~~--Ik~~G~y~V~V~L~~~v-~a~i~v~V~ 196 (198)
+.+.. ...-|.|.|.+.-..+. .+.+.+.|.
T Consensus 91 L~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 124 (126)
T 1eaj_A 91 INVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVL 124 (126)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECcCChHHCeEEEEEEEcCCccCCcEEEEEEE
Confidence 44444 67899999999877664 567777765
Done!