Query 029178
Match_columns 197
No_of_seqs 149 out of 654
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 14:09:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gle_A Neurabin-1; SAM domain, 99.7 3.1E-17 1E-21 116.1 6.3 63 133-195 3-66 (74)
2 3bq7_A Diacylglycerol kinase d 99.7 4E-17 1.4E-21 118.2 6.6 65 131-195 4-69 (81)
3 3k1r_B Usher syndrome type-1G 99.7 4.1E-17 1.4E-21 117.7 6.5 58 139-196 2-59 (74)
4 2f3n_A SH3 and multiple ankyri 99.7 4.3E-17 1.5E-21 116.8 5.9 61 135-195 3-64 (76)
5 2e8o_A SAM domain and HD domai 99.7 8.2E-17 2.8E-21 121.6 6.6 68 128-195 21-91 (103)
6 2ean_A Connector enhancer of k 99.7 9.8E-17 3.3E-21 116.1 5.5 66 130-195 4-72 (83)
7 3bs5_B Connector enhancer of k 99.6 1.5E-16 5.2E-21 114.0 5.7 64 132-195 2-68 (80)
8 1kw4_A Polyhomeotic; SAM domai 99.6 2E-16 6.9E-21 117.6 6.1 69 128-196 8-78 (89)
9 3bs7_A Protein aveugle; sterIl 99.6 3.4E-16 1.2E-20 111.7 5.0 64 132-195 1-67 (78)
10 2e8n_A Ephrin type-A receptor 99.6 9.8E-16 3.4E-20 112.8 7.0 59 137-195 10-70 (88)
11 2kso_A Ephrin type-A receptor 99.6 6E-16 2.1E-20 113.2 5.3 62 134-195 11-74 (82)
12 1b4f_A EPHB2; SAM domain, EPH 99.6 1.5E-15 5E-20 110.0 7.2 58 138-195 10-69 (82)
13 3bs5_A Protein aveugle; sterIl 99.6 5.7E-16 2E-20 118.3 5.1 69 127-195 16-87 (106)
14 2qkq_A Ephrin type-B receptor 99.6 1.2E-15 4E-20 111.0 5.8 58 138-195 14-73 (83)
15 1ucv_A Ephrin type-A receptor 99.6 1.3E-15 4.6E-20 110.5 6.0 58 138-195 6-65 (81)
16 1v85_A Similar to ring finger 99.6 5.6E-16 1.9E-20 114.7 3.7 67 129-195 12-83 (91)
17 3h8m_A Ephrin type-A receptor 99.6 2.6E-15 8.8E-20 112.1 7.2 62 134-195 20-83 (90)
18 2eao_A Ephrin type-B receptor 99.6 3.2E-15 1.1E-19 112.3 7.6 59 137-195 20-80 (99)
19 1b0x_A Protein (EPHA4 receptor 99.6 2.5E-15 8.7E-20 111.9 6.3 59 137-195 24-84 (94)
20 3hil_A Ephrin type-A receptor 99.6 3.3E-15 1.1E-19 109.8 6.7 59 137-195 21-81 (82)
21 2dl0_A SAM and SH3 domain-cont 99.6 1.9E-15 6.6E-20 114.1 5.5 66 130-195 14-81 (97)
22 2kg5_A ARF-GAP, RHO-GAP domain 99.6 2.6E-15 9E-20 113.9 6.1 62 134-195 21-84 (100)
23 2k4p_A Phosphatidylinositol-3, 99.6 3.4E-15 1.2E-19 110.8 6.2 62 134-195 21-84 (86)
24 1v38_A SAM-domain protein sams 99.5 9.7E-15 3.3E-19 105.8 7.4 65 131-195 4-70 (78)
25 3kka_C Ephrin type-A receptor 99.5 9.7E-15 3.3E-19 108.1 6.4 58 138-195 20-79 (86)
26 2d8c_A Phosphatidylcholine:cer 99.5 9.3E-15 3.2E-19 110.6 5.6 64 130-195 13-79 (97)
27 2eam_A Putative 47 kDa protein 99.5 6.6E-15 2.2E-19 106.3 4.5 59 137-195 10-72 (80)
28 1x40_A ARAP2; ASAP-related pro 99.5 1.4E-14 4.7E-19 107.7 6.1 58 138-195 14-73 (91)
29 1wwv_A Connector enhancer of k 99.5 9.6E-15 3.3E-19 109.3 4.1 66 128-195 5-73 (91)
30 2ke7_A Ankyrin repeat and ster 99.5 1.2E-14 4.2E-19 110.0 3.9 61 135-195 18-82 (103)
31 1pk1_B Sex COMB on midleg CG94 99.5 4.8E-14 1.7E-18 105.1 5.7 66 130-195 10-78 (89)
32 2lmr_A ODIN, ankyrin repeat an 99.4 7.2E-14 2.4E-18 106.5 5.3 58 138-195 28-89 (101)
33 3sei_A Caskin-1; SAM domain, p 99.4 3.4E-13 1.2E-17 107.9 6.1 58 138-195 9-67 (149)
34 3sei_A Caskin-1; SAM domain, p 99.4 9.5E-13 3.3E-17 105.3 7.0 57 139-195 79-137 (149)
35 1ow5_A Serine/threonine-protei 99.3 4.6E-13 1.6E-17 100.2 3.8 58 138-195 14-73 (85)
36 2y9u_A Tumor protein 63; apopt 99.3 1.9E-12 6.6E-17 92.9 6.6 58 138-195 3-61 (69)
37 2kiv_A Ankyrin repeat and ster 99.3 2.6E-12 8.8E-17 102.1 6.6 59 138-196 87-148 (148)
38 2d3d_A VTS1 protein; RNA bindi 99.3 3E-12 1E-16 96.2 6.2 55 139-195 18-73 (88)
39 2kiv_A Ankyrin repeat and ster 99.3 2E-12 7E-17 102.7 4.6 58 138-195 13-74 (148)
40 2y9t_A Tumor protein 63; apopt 99.3 5.1E-12 1.7E-16 93.5 5.7 58 138-195 5-63 (82)
41 2b6g_A VTS1P; alpha-helix, pen 99.2 8.5E-12 2.9E-16 98.3 4.8 56 138-195 48-104 (119)
42 2es6_A VTS1P; SAM domain, prot 99.2 1.1E-11 3.9E-16 95.2 4.8 55 139-195 31-86 (101)
43 3tad_C Liprin-beta-1; protein 99.1 2.6E-11 9E-16 106.1 4.8 66 130-195 11-78 (265)
44 1oxj_A RNA-binding protein sma 99.0 3.4E-10 1.1E-14 94.1 5.4 56 138-195 6-61 (173)
45 3tad_C Liprin-beta-1; protein 98.9 9.8E-10 3.4E-14 96.2 5.4 61 135-195 88-149 (265)
46 2dkz_A Hypothetical protein LO 98.9 2.6E-09 9E-14 79.7 5.7 66 129-194 10-77 (84)
47 1uqv_A STE50 protein; SAM, ste 98.7 8.6E-09 2.9E-13 77.1 3.5 64 132-195 7-75 (85)
48 3tac_B Liprin-alpha-2; transfe 98.7 2.7E-08 9.4E-13 89.7 6.4 64 133-196 35-102 (334)
49 2l5y_A Stromal interaction mol 98.3 1.3E-07 4.4E-12 76.9 2.0 57 134-190 78-140 (150)
50 2k60_A Protein (stromal intera 98.3 2E-07 6.7E-12 75.9 1.7 57 134-190 78-140 (150)
51 1dxs_A P53-like transcription 98.2 2.7E-06 9.1E-11 63.0 6.3 59 138-196 5-64 (80)
52 3tac_B Liprin-alpha-2; transfe 98.2 1.9E-06 6.4E-11 77.8 6.1 58 138-195 161-221 (334)
53 2eap_A Lymphocyte cytosolic pr 98.2 3.5E-06 1.2E-10 63.6 6.2 66 129-195 14-81 (90)
54 3idw_A Actin cytoskeleton-regu 97.8 2.8E-05 9.6E-10 56.5 4.7 53 144-196 7-64 (72)
55 2qar_B Telsam domain; polymer, 95.8 0.0047 1.6E-07 46.1 2.6 54 130-185 8-65 (93)
56 1sv0_C Modulator of the activi 95.7 0.0027 9.3E-08 46.0 0.9 54 130-185 7-66 (82)
57 1ji7_A ETS-related protein TEL 95.4 0.0046 1.6E-07 45.8 1.3 48 130-178 8-58 (89)
58 1wwu_A Hypothetical protein FL 93.6 0.064 2.2E-06 40.9 3.9 41 137-179 24-65 (99)
59 2e8m_A Epidermal growth factor 93.0 0.15 5E-06 38.9 5.1 40 138-179 35-75 (99)
60 1x66_A Friend leukemia integra 91.6 0.3 1E-05 36.6 5.2 48 130-179 20-72 (98)
61 1sv0_A ETS DNA-binding protein 89.7 0.22 7.4E-06 36.5 2.9 47 130-178 6-56 (85)
62 2e8p_A ELF3 protein; cell-free 89.2 0.23 7.9E-06 37.1 2.8 48 131-178 21-72 (92)
63 2dkx_A SAM pointed domain-cont 87.9 0.37 1.3E-05 35.9 3.2 47 130-178 20-70 (96)
64 1sxd_A GA repeat binding prote 86.1 0.25 8.5E-06 36.6 1.3 47 130-178 19-69 (91)
65 1sxe_A Transcriptional regulat 84.6 1.3 4.4E-05 33.1 4.6 48 130-179 23-75 (97)
66 2jv3_A ETS1 proto-oncogene; ET 81.6 0.48 1.6E-05 36.2 1.2 47 130-178 37-87 (110)
67 2qb0_B Telsam domain - lysozym 79.8 0.75 2.6E-05 38.7 2.0 46 131-178 9-58 (241)
68 2p2u_A HOST-nuclease inhibitor 68.7 3.9 0.00013 32.9 3.4 44 137-182 107-150 (171)
69 2dky_A RHO-GTPase-activating p 68.6 4.1 0.00014 30.5 3.2 41 138-178 22-68 (91)
70 2h80_A STAR-related lipid tran 62.3 3.6 0.00012 30.2 1.9 31 138-168 20-52 (81)
71 2lpe_A Kinase suppressor of RA 61.7 6.1 0.00021 32.0 3.3 56 138-194 82-142 (149)
72 2ytu_A Friend leukemia integra 51.7 14 0.0005 28.8 3.9 47 130-178 34-85 (128)
73 2qol_A Ephrin receptor; recept 30.1 11 0.00037 32.0 0.0 34 139-172 339-373 (373)
No 1
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=99.69 E-value=3.1e-17 Score=116.12 Aligned_cols=63 Identities=25% Similarity=0.381 Sum_probs=60.4
Q ss_pred ccCCCCcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 133 KDQQKAETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 133 ~~~~W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+...|+..+|++||.++||++|.+.|.+|+||++.|+.||++||++|||+ +|||++|+++|+.
T Consensus 3 ~v~~Ws~~~V~~WL~~~gl~~y~~~F~~~~i~g~~Ll~l~~~dL~~lGI~~~g~r~kil~~i~~ 66 (74)
T 2gle_A 3 MVHEWSVQQVSHWLVGLSLDQYVSEFSAQNISGEQLLQLDGNKLKALGMTSSQDRALVKKKLKE 66 (74)
T ss_dssp CGGGCCSGGGHHHHHHTTTHHHHHHHTTTTCCHHHHHTCCHHHHHTTTCCCHHHHHHHHHHHHS
T ss_pred CcccCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHhhCCHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999 9999999999875
No 2
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=99.68 E-value=4e-17 Score=118.24 Aligned_cols=65 Identities=28% Similarity=0.477 Sum_probs=61.4
Q ss_pred CcccCCCCcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 131 KKKDQQKAETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 131 rk~~~~W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+++...|+..+|.+||+++||++|.+.|.+++||+..|+.||++||++|||+ +|||+||+.+|+.
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~ghr~kIl~aI~~ 69 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGIKE 69 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHCcCCHHHHhHcCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999998 9999999999975
No 3
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=99.68 E-value=4.1e-17 Score=117.68 Aligned_cols=58 Identities=36% Similarity=0.718 Sum_probs=55.4
Q ss_pred cchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCCcchHHHHHHHHHhc
Q 029178 139 ETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIPMGPRKKILLALESR 196 (197)
Q Consensus 139 ~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~lGpRKKIL~aIq~~ 196 (197)
.++|.+||+++||++|.+.|.+++||++.|.+||++||++|||++|||+||+++|+++
T Consensus 2 ~~~v~~wL~~lgL~~Y~~~F~~~~id~e~l~~lt~~DL~~lGI~~G~RkkIl~ai~~~ 59 (74)
T 3k1r_B 2 TSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPREKILGAVRRR 59 (74)
T ss_dssp CCHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHCCCHHHHHHHHHcCcCHHHHhHCCHHHHHHcCCCcchHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999999999999999864
No 4
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=99.68 E-value=4.3e-17 Score=116.82 Aligned_cols=61 Identities=30% Similarity=0.410 Sum_probs=59.2
Q ss_pred CCCCcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 135 QQKAETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 135 ~~W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
..|+..+|.+||+++||++|.+.|.+++||++.|+.||++||++|||+ +|||+||+++|+.
T Consensus 3 ~~Ws~~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~Ghr~kIl~aI~~ 64 (76)
T 2f3n_A 3 QLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALRQ 64 (76)
T ss_dssp GGCCHHHHHHHHHHTTCGGGHHHHHHTTCCGGGGGGCCHHHHHHTTCCCHHHHHHHHHHHHT
T ss_pred hhCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHccCCHHHHHHcCCCChhHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999 9999999999975
No 5
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=8.2e-17 Score=121.62 Aligned_cols=68 Identities=22% Similarity=0.337 Sum_probs=63.8
Q ss_pred CCCCcccCCCCcchHHHHHHhCCChh--hHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 128 PASKKKDQQKAETSVDGFLRSLGLEK--YSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 128 ~~~rk~~~~W~~~~V~~wLksLGL~k--Y~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
....++...|+..+|++||+.+||++ |++.|.+|+||++.|+.|+++||++|||. .|||++|+++|+.
T Consensus 21 ~~~~~~v~~Ws~~~V~~WL~~lgl~~~~y~~~F~~~~I~G~~Ll~Lt~~dLkeLGI~~~G~R~kil~~I~~ 91 (103)
T 2e8o_A 21 LELHPDYKTWGPEQVCSFLRRGGFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQR 91 (103)
T ss_dssp CCCCSCGGGCHHHHHHHHHHHHTCCCHHHHHHHHHTTCCTTTTTTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cccccChhhCCHHHHHHHHHHcCCChHHHHHHHHHcCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 44567789999999999999999999 99999999999999999999999999998 9999999999975
No 6
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=9.8e-17 Score=116.13 Aligned_cols=66 Identities=24% Similarity=0.454 Sum_probs=62.2
Q ss_pred CCcccCCCCcchHHHHHHhC--CChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 130 SKKKDQQKAETSVDGFLRSL--GLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksL--GL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+.++...|+..+|++||+.+ ||++|.+.|.+|+||++.|+.||++||++|||+ +|||++|+++|+.
T Consensus 4 ~~~~v~~Wt~~~V~~WL~~l~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL~~LGI~~~ghr~~il~~I~~ 72 (83)
T 2ean_A 4 GSSGVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDL 72 (83)
T ss_dssp SCCSGGGCCTTHHHHHHTTSCGGGTTTHHHHHHHTCCHHHHTTCCHHHHHHHTCCCSHHHHHHHHHHHH
T ss_pred CCCccccCCHHHHHHHHHHHHhhHHHHHHHHHHCCCCHHHHhhCCHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 55678899999999999999 599999999999999999999999999999998 9999999999874
No 7
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=99.64 E-value=1.5e-16 Score=114.03 Aligned_cols=64 Identities=25% Similarity=0.473 Sum_probs=60.2
Q ss_pred cccCCCCcchHHHHHHhC--CChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 132 KKDQQKAETSVDGFLRSL--GLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 132 k~~~~W~~~~V~~wLksL--GL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
++...|+..+|+.||+++ ||++|.+.|.+|+||++.|+.||++||++|||+ +|||++|+.+|+.
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~~gl~~Y~~~F~~~~i~G~~Ll~L~~~dL~~lGI~~~ghr~~il~~I~~ 68 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDL 68 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSCGGGGGGHHHHHHHTCCHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHhhhHHHHHHHHHHcCCCHHHHHHCCHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 346789999999999999 599999999999999999999999999999998 9999999999875
No 8
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=99.64 E-value=2e-16 Score=117.59 Aligned_cols=69 Identities=30% Similarity=0.509 Sum_probs=63.5
Q ss_pred CCCCcccCCCCcchHHHHHHhC-CChhhHHHHhhcCcCHHHhcCCCHHHH-hcCCCCcchHHHHHHHHHhc
Q 029178 128 PASKKKDQQKAETSVDGFLRSL-GLEKYSITFQAEEVDMTALLHMTDEDL-KALGIPMGPRKKILLALESR 196 (197)
Q Consensus 128 ~~~rk~~~~W~~~~V~~wLksL-GL~kY~~~F~~eeIDgdaLl~LTeeDL-KeLGI~lGpRKKIL~aIq~~ 196 (197)
..++.+...|+..+|++||+++ ||++|.+.|.+++|||++|+.||++|| ++|||++|||+||+++|+..
T Consensus 8 ~~~~~~v~~Ws~edV~~wL~~l~gl~~y~~~F~~~~IdG~~LL~Lt~~dL~k~lgIklG~r~kI~~~I~~L 78 (89)
T 1kw4_A 8 GTDRPPISSWSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVAKVESI 78 (89)
T ss_dssp --CCCCGGGCCHHHHHHHHHTSTTCGGGHHHHHHTTCCHHHHHHCCHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCchhCCHHHHHHHHHHCcChHHHHHHHHHhCccHHHHhcCCHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 3456678999999999999999 999999999999999999999999999 89999999999999999763
No 9
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=99.61 E-value=3.4e-16 Score=111.72 Aligned_cols=64 Identities=22% Similarity=0.290 Sum_probs=60.5
Q ss_pred cccCCCCcchHHHHHHhC--CChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 132 KKDQQKAETSVDGFLRSL--GLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 132 k~~~~W~~~~V~~wLksL--GL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
|+...|+..+|+.||+.+ |+++|.+.|.+|+||++.|+.||++||++|||+ .|||++|+.+|+.
T Consensus 1 k~v~~Wt~~~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L~~~dL~~lGI~~~g~r~~il~~I~~ 67 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVK 67 (78)
T ss_dssp CCGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhCCHHHHhHcCCCCHHHHHHHHHHHHH
Confidence 456789999999999997 999999999999999999999999999999999 9999999999874
No 10
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=9.8e-16 Score=112.79 Aligned_cols=59 Identities=25% Similarity=0.481 Sum_probs=55.7
Q ss_pred CCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 137 KAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 137 W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
....+|.+||.++||++|.+.|.+++|| ++.|..||++||++|||+ +|||+||+++|+.
T Consensus 10 ~~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhRkkIl~ai~~ 70 (88)
T 2e8n_A 10 VPFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVKRIGVRLPGHQKRIAYSLLG 70 (88)
T ss_dssp CSCSSHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCTTHHHHTTCCSHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHH
Confidence 3467999999999999999999999999 999999999999999999 8999999999875
No 11
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=99.60 E-value=6e-16 Score=113.23 Aligned_cols=62 Identities=24% Similarity=0.483 Sum_probs=53.5
Q ss_pred cCCCCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 134 DQQKAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 134 ~~~W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+..|...+|.+||.++||++|.+.|.+++|| ++.|..||++||++|||+ +|||+||+.+|+.
T Consensus 11 ~~~~~~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~ 74 (82)
T 2kso_A 11 VPRGSHMTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLG 74 (82)
T ss_dssp -------CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTCCHHHHHHHHCCCTTHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHH
Confidence 4557889999999999999999999999999 999999999999999999 8999999999875
No 12
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=99.60 E-value=1.5e-15 Score=110.05 Aligned_cols=58 Identities=24% Similarity=0.457 Sum_probs=54.9
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+++||++|.+.|.+++| |++.|..||++||++|||+ +|||+||+.+|+.
T Consensus 10 ~~~~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhrkkIl~ai~~ 69 (82)
T 1b4f_A 10 SFNTVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQV 69 (82)
T ss_dssp CCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999999 7999999999999999999 8999999999875
No 13
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=99.60 E-value=5.7e-16 Score=118.26 Aligned_cols=69 Identities=20% Similarity=0.261 Sum_probs=62.3
Q ss_pred CCCCCcccCCCCcchHHHHHHhC--CChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 127 VPASKKKDQQKAETSVDGFLRSL--GLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 127 ~~~~rk~~~~W~~~~V~~wLksL--GL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
.....++...|+..+|+.||+.+ ||++|.+.|.+|+||++.|+.|+++||++|||+ .|||++|+.+|+.
T Consensus 16 ~~~~~~~v~~Wt~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dLk~LGI~~~GhR~kIl~~I~~ 87 (106)
T 3bs5_A 16 KTTRPKAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVK 87 (106)
T ss_dssp ----CCCGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhCCHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 33456678899999999999999 999999999999999999999999999999999 9999999999875
No 14
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=110.97 Aligned_cols=58 Identities=29% Similarity=0.492 Sum_probs=55.2
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcC-cCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEE-VDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~ee-IDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+++||++|.+.|.+++ +|++.|..||++||++|||+ +|||+||+++|+.
T Consensus 14 ~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhrkkIl~ai~~ 73 (83)
T 2qkq_A 14 AFGSVGEWLRAIKMGRYEESFAAAGFGSFELVSQISAEDLLRIGVTLAGHQKKILASVQH 73 (83)
T ss_dssp CCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 4679999999999999999999998 89999999999999999999 9999999999975
No 15
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.59 E-value=1.3e-15 Score=110.54 Aligned_cols=58 Identities=33% Similarity=0.569 Sum_probs=55.0
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+++||++|.+.|.+++|| ++.|..||++||++|||+ +|||+||+.+|+.
T Consensus 6 ~~~~V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~ 65 (81)
T 1ucv_A 6 SGLTVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRALGITLMGHQKKILGSIQT 65 (81)
T ss_dssp CCSBHHHHHHHTTCGGGHHHHHHTTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHCCCHHHHHHHHHcCCChHHHHHHcCHHHHHhCCCCChhHHHHHHHHHHH
Confidence 457899999999999999999999999 999999999999999999 8999999999875
No 16
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.58 E-value=5.6e-16 Score=114.73 Aligned_cols=67 Identities=28% Similarity=0.334 Sum_probs=62.9
Q ss_pred CCCcccCCCCcchHHHHHHhCCC--hhhHHHHhhcCcCHHHhcCCCHHHHhc--CCCC-cchHHHHHHHHHh
Q 029178 129 ASKKKDQQKAETSVDGFLRSLGL--EKYSITFQAEEVDMTALLHMTDEDLKA--LGIP-MGPRKKILLALES 195 (197)
Q Consensus 129 ~~rk~~~~W~~~~V~~wLksLGL--~kY~~~F~~eeIDgdaLl~LTeeDLKe--LGI~-lGpRKKIL~aIq~ 195 (197)
...++...|+..+|+.||+.+|+ ++|.+.|.+|+||++.|+.||++||++ |||. .|||++|+.+|+.
T Consensus 12 ~~~~~v~~Wt~~dV~~WL~~~gl~~~~Y~~~F~~~~IdG~~Ll~Lt~~dL~~~~LGI~~~g~r~~il~~I~~ 83 (91)
T 1v85_A 12 LVHKAVDKWTTEEVVLWLEQLGPWASLYRDRFLSERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILTELER 83 (91)
T ss_dssp HHHSCGGGCCHHHHHHHHHHHCGGGHHHHHHHHHTTCCHHHHHHCCHHHHHSTTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCHHHHHHHHHHhCCCHHHHhcCCHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence 44567889999999999999999 999999999999999999999999998 9999 9999999999975
No 17
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=99.58 E-value=2.6e-15 Score=112.08 Aligned_cols=62 Identities=29% Similarity=0.503 Sum_probs=58.3
Q ss_pred cCCCCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 134 DQQKAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 134 ~~~W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+.-+...+|.+||+++||++|.+.|.+++|| ++.|..|+++||++|||+ +|||+||+.+|+.
T Consensus 20 ~~~~~~~~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL~~lGIt~~GHRkkIL~ai~~ 83 (90)
T 3h8m_A 20 PDFTTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQT 83 (90)
T ss_dssp CCCCCCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred CCCcchhHHHHHHHHCChHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 4556789999999999999999999999998 999999999999999999 8999999999975
No 18
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=3.2e-15 Score=112.32 Aligned_cols=59 Identities=34% Similarity=0.520 Sum_probs=55.9
Q ss_pred CCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 137 KAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 137 W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
....+|.+||+++||++|.+.|.+++|| ++.|..||++||++|||+ +|||+||+.+|+.
T Consensus 20 ~~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~ 80 (99)
T 2eao_A 20 TAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHS 80 (99)
T ss_dssp TSCCBHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHCCcHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHH
Confidence 3568999999999999999999999999 999999999999999999 8999999999975
No 19
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=99.57 E-value=2.5e-15 Score=111.93 Aligned_cols=59 Identities=29% Similarity=0.573 Sum_probs=55.6
Q ss_pred CCcchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 137 KAETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 137 W~~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
....+|.+||+++||++|.+.|.+++| |++.|.+||++||++|||+ +|||+||+.+|+.
T Consensus 24 ~~~~~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~ 84 (94)
T 1b0x_A 24 SAVVSVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQA 84 (94)
T ss_dssp CSSCCHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHH
Confidence 356899999999999999999999999 8999999999999999999 8999999999875
No 20
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=99.57 E-value=3.3e-15 Score=109.81 Aligned_cols=59 Identities=31% Similarity=0.603 Sum_probs=56.1
Q ss_pred CCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 137 KAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 137 W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
....+|.+||+++||++|.+.|.+++|| ++.|..|+++||++|||+ +|||+||+.+|+.
T Consensus 21 ~~~~~V~~WL~~lgL~qY~~~F~~~g~~s~e~l~~lt~~DL~~lGIt~~GHRkkIL~aiq~ 81 (82)
T 3hil_A 21 IPYRTVSEWLESIRMKRYILHFHSAGLDTMECVLELTAEDLTQMGITLPGHQKRILCSIQG 81 (82)
T ss_dssp CCCSSHHHHHHHTTCGGGHHHHHHTTCCSGGGGTTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHhCCHHHHHHHHHHcCCChHHHHhcCCHHHHHHCCCCCHHHHHHHHHHHHh
Confidence 3668999999999999999999999998 999999999999999999 8999999999985
No 21
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.9e-15 Score=114.12 Aligned_cols=66 Identities=23% Similarity=0.298 Sum_probs=62.0
Q ss_pred CCcccCCCCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 130 SKKKDQQKAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
.|++...|...+|.+||..+||++|.+.|.++++| ++.|.+|+++||++|||+ +|||+||+++|+.
T Consensus 14 ~~~p~~~~~~~sV~eWL~~igL~qY~~~F~~~g~d~le~l~~lt~~DL~~lGIt~~gHrkkIl~ai~~ 81 (97)
T 2dl0_A 14 CRKPVSPGCISSVSDWLISIGLPMYAGTLSTAGFSTLSQVPSLSHTCLQEAGITEERHIRKLLSAARL 81 (97)
T ss_dssp CCCCCCCSCCCSHHHHHHHHTCGGGHHHHHHHTCCSTTSGGGCCHHHHHHHTCCCHHHHHHHHHHHHT
T ss_pred ccCCCCccccCcHHHHHHHCCCHHHHHHHHHcCCCcHHHHHhcCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 56667778999999999999999999999999998 799999999999999999 9999999999975
No 22
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=99.57 E-value=2.6e-15 Score=113.92 Aligned_cols=62 Identities=31% Similarity=0.460 Sum_probs=58.1
Q ss_pred cCCCCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 134 DQQKAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 134 ~~~W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+...+|.+||.++||++|.+.|.+++|| ++.|..||++||++|||+ .|||+||+++|+.
T Consensus 21 m~~~~~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~Lt~eDLkeLGIt~~GhRkkIL~aI~~ 84 (100)
T 2kg5_A 21 MAAPQDLDIAVWLATVHLEQYADTFRRHGLATAGAARGLGHEELKQLGISATGHRKRILRLLQT 84 (100)
T ss_dssp CSCCTTCBHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHTT
T ss_pred cCCCCcChHHHHHHHCCCHHHHHHHHHcCCChHHHHHhcCHHHHHHCCCCChhHHHHHHHHHHH
Confidence 4455778999999999999999999999999 999999999999999999 9999999999975
No 23
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=99.56 E-value=3.4e-15 Score=110.83 Aligned_cols=62 Identities=26% Similarity=0.434 Sum_probs=57.5
Q ss_pred cCCCCcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 134 DQQKAETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 134 ~~~W~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...|...+|.+||.++||++|.+.|.++++| ++.|..||++||++|||+ +|||+||+.+|+.
T Consensus 21 ~~~~~~~~V~eWL~~lgL~qY~~~F~~~g~~~le~l~~lt~~DL~~lGIt~~GHRkkIL~aI~~ 84 (86)
T 2k4p_A 21 MSGLGEAGMSAWLRAIGLERYEEGLVHNGWDDLEFLSDITEEDLEEAGVQDPAHKRLLLDTLQL 84 (86)
T ss_dssp -CCCCSCSSHHHHHTTTCGGGHHHHHTTTCCCHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 3557889999999999999999999999985 899999999999999999 9999999999975
No 24
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=99.55 E-value=9.7e-15 Score=105.77 Aligned_cols=65 Identities=22% Similarity=0.371 Sum_probs=58.5
Q ss_pred CcccCCCCcchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 131 KKKDQQKAETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 131 rk~~~~W~~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
++.+......+|.+||..+||++|.+.|..+++ +++.+..||++||++|||+ +|||+||+.+|+.
T Consensus 4 ~~~~~~~~~~~V~eWL~~i~L~~Y~~~F~~~gy~~~~~~~~lt~~DL~~lGI~~~ghrkkil~ai~~ 70 (78)
T 1v38_A 4 GSSGRRENHQTIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLSAAES 70 (78)
T ss_dssp SCCCCCSSCCBHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCcHHHHHHHCCCHHHHHHHHHcCCCCHHHHhhcCHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 333455588899999999999999999999998 5999999999999999999 9999999999874
No 25
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=99.53 E-value=9.7e-15 Score=108.14 Aligned_cols=58 Identities=26% Similarity=0.505 Sum_probs=53.3
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+++||++|.+.|.+++|| ++.|..|+++||++|||+ +|||+||+.+|+.
T Consensus 20 ~~~~V~~WL~~lgL~qY~~~F~~~g~d~le~l~~lt~~DL~~LGIt~~GHRkkIL~ai~~ 79 (86)
T 3kka_C 20 PFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLG 79 (86)
T ss_dssp ---CHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHhCCcHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 567999999999999999999999998 999999999999999999 8999999999975
No 26
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=99.52 E-value=9.3e-15 Score=110.60 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=59.9
Q ss_pred CCcccCCCCcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhc--CCCC-cchHHHHHHHHHh
Q 029178 130 SKKKDQQKAETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKA--LGIP-MGPRKKILLALES 195 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKe--LGI~-lGpRKKIL~aIq~ 195 (197)
..++...|+.++|+.||+++||++|++.| +| ||++.|+.||++||++ |||. .|+|+||+.+|+.
T Consensus 13 ~~~~v~~Ws~edV~~WL~~~Gl~~Y~~~F-~~-IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~~I~~ 79 (97)
T 2d8c_A 13 TMKEVVYWSPKKVADWLLENAMPEYCEPL-EH-FTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIET 79 (97)
T ss_dssp CCSCCSSCCTTHHHHHHHHTTCTTTTTTT-TT-CCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHcCCHHHHHHH-Hc-CCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHHHHHH
Confidence 45667899999999999999999999999 67 9999999999999999 9998 9999999999975
No 27
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=6.6e-15 Score=106.34 Aligned_cols=59 Identities=32% Similarity=0.478 Sum_probs=53.9
Q ss_pred CCcchHHHHHHhCCChhhHHHHhhcCcCHHHh---cCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 137 KAETSVDGFLRSLGLEKYSITFQAEEVDMTAL---LHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 137 W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaL---l~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+...+|.+||+++||++|.+.|.+++||...+ ..||++||++|||+ +|||+||+.+|+.
T Consensus 10 ~~~~~V~~WL~~lgL~~Y~~~F~~~~i~~~~~l~~~~lt~~dL~~lGI~~~ghR~kIl~ai~~ 72 (80)
T 2eam_A 10 CPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQL 72 (80)
T ss_dssp CCCCCHHHHHHHHTCGGGHHHHHHTTCCCTTTSSSSSSCTTHHHHSSCCCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 36679999999999999999999999986654 59999999999999 9999999999975
No 28
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.52 E-value=1.4e-14 Score=107.68 Aligned_cols=58 Identities=28% Similarity=0.519 Sum_probs=54.5
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+++||++|.+.|.++++ +++.|.+||++||++|||+ +|||+||+.+|+.
T Consensus 14 ~~~~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GHrkkIl~ai~~ 73 (91)
T 1x40_A 14 VNVDIKDFLMSINLEQYLLHFHESGFTTVKDCAAINDSLLQKIGISPTGHRRRILKQLQI 73 (91)
T ss_dssp TCCBHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhcCHHHHHHCCCCCHhHHHHHHHHHHH
Confidence 56789999999999999999999998 5999999999999999999 9999999999874
No 29
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.50 E-value=9.6e-15 Score=109.29 Aligned_cols=66 Identities=24% Similarity=0.394 Sum_probs=60.6
Q ss_pred CCCCcccCCCCcchHHHHHHhC--CChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 128 PASKKKDQQKAETSVDGFLRSL--GLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 128 ~~~rk~~~~W~~~~V~~wLksL--GL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
....++...|+..+|+.||+.+ ++.+| .|.+|+|+++.|+.||++||++|||. .|||++|+.+|+.
T Consensus 5 ~~~~~~v~~Wt~~~V~~WL~~l~~~l~~Y--~F~~~~I~G~~LL~Lt~~dL~~LGI~~~Ghr~~Il~~I~~ 73 (91)
T 1wwv_A 5 SSGMEPVETWTPGKVATWLRGLDDSLQDY--PFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQ 73 (91)
T ss_dssp SCSCCCTTTCCTTTHHHHHHHHCHHHHTS--CHHHHCCCHHHHTTCCTTTGGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCccccCCHHHHHHHHHhcCCccccc--cHHhcCccHHHHhhCCHHHHHHcCCCcHhHHHHHHHHHHH
Confidence 3455678899999999999977 79999 89999999999999999999999999 9999999999974
No 30
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=99.49 E-value=1.2e-14 Score=109.97 Aligned_cols=61 Identities=31% Similarity=0.470 Sum_probs=52.9
Q ss_pred CCCCcchHHHHHHhCCChhhHHHHhhcCcCHHHh---cCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 135 QQKAETSVDGFLRSLGLEKYSITFQAEEVDMTAL---LHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 135 ~~W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaL---l~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
..|...+|.+||.++||++|.+.|.+++||+..+ ..||++||++|||+ +|||+||+.+|+.
T Consensus 18 ~~w~~~~V~~WL~~igL~qY~~~F~~~gid~~~~l~~~~lt~~DL~~lGI~~~GhRkkIl~ai~~ 82 (103)
T 2ke7_A 18 PRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQL 82 (103)
T ss_dssp -----CCTTHHHHHTTCTTCHHHHHHTTCCCHHHHHTTCCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred cCCCHhHHHHHHHHCCCHHHHHHHHHcCCCcHHHHhcccCCHHHHhHCCCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999997765 59999999999999 9999999999975
No 31
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=99.46 E-value=4.8e-14 Score=105.08 Aligned_cols=66 Identities=24% Similarity=0.332 Sum_probs=60.9
Q ss_pred CCcccCCCCcchHHHHHHhC--CChhhHHHHhhcCcCHHHhcCCCHHHH-hcCCCCcchHHHHHHHHHh
Q 029178 130 SKKKDQQKAETSVDGFLRSL--GLEKYSITFQAEEVDMTALLHMTDEDL-KALGIPMGPRKKILLALES 195 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksL--GL~kY~~~F~~eeIDgdaLl~LTeeDL-KeLGI~lGpRKKIL~aIq~ 195 (197)
.+.++..|+..+|++||+++ |+++|.+.|.+++|||++|+.||++|| +.|||.+||+.||..+|+.
T Consensus 10 ~~~~v~~WsvedV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt~~dl~~~mgiklGpalKi~~~I~~ 78 (89)
T 1pk1_B 10 LRSQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSERMMKYMGLKLGPALKICNLVNK 78 (89)
T ss_dssp -CCCGGGCCHHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCCHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred CCCCchhCCHHHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCCHHHHHHccCCCccHHHHHHHHHHH
Confidence 45667899999999999999 799999999999999999999999997 5799999999999999975
No 32
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=99.44 E-value=7.2e-14 Score=106.50 Aligned_cols=58 Identities=34% Similarity=0.516 Sum_probs=53.3
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcC-HHHhc--CCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVD-MTALL--HMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl--~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+++||++|.+.|.+++|| ++.|. .||++||++|||+ +|||+||+.+|+.
T Consensus 28 ~~~~V~eWL~~LgL~qY~~~F~~~g~d~~e~l~~~~Lt~eDL~eLGIt~~GHRkkIL~aI~~ 89 (101)
T 2lmr_A 28 LEQSVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARS 89 (101)
T ss_dssp SSCCHHHHHHHHTCGGGHHHHHHTTCCCTTSTTTSCCCHHHHHHHTCCCHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 345899999999999999999999998 67787 8999999999999 9999999999975
No 33
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=99.39 E-value=3.4e-13 Score=107.90 Aligned_cols=58 Identities=31% Similarity=0.527 Sum_probs=55.5
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+..+|.+||+++||++|.+.|.++++|++.|..||++||++|||+ +|||+||+.+|+.
T Consensus 9 ~~~~V~~WL~~lgL~~Y~~~F~~~g~d~~~l~~lt~~DL~~lGIt~~gHrkkil~ai~~ 67 (149)
T 3sei_A 9 SSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDLTAIGVTKPGHRKKIAAEISG 67 (149)
T ss_dssp HHHHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCSHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHCCcHHHHHHHHHcCCCHHHHccCCHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 457999999999999999999999999999999999999999999 9999999999975
No 34
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=99.36 E-value=9.5e-13 Score=105.32 Aligned_cols=57 Identities=26% Similarity=0.501 Sum_probs=54.3
Q ss_pred cchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 139 ETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 139 ~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
..+|.+||+++||++|.+.|.+++|| ++.|..||++||++|||+ +|||+||+.+|+.
T Consensus 79 p~~v~~WL~~igL~qY~~~F~~~g~d~~~~l~~lt~~dL~~lGI~~~gHr~kIl~ai~~ 137 (149)
T 3sei_A 79 PANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVRK 137 (149)
T ss_dssp CSCHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHcCchhhHHHHHHCCCchHHHHhhCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999998 999999999999999999 9999999999974
No 35
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=99.34 E-value=4.6e-13 Score=100.24 Aligned_cols=58 Identities=28% Similarity=0.335 Sum_probs=53.7
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcCH-HHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVDM-TALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeIDg-daLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+...|++||.++||++|.+.|.+++|++ +.|..|..++|++|||+ +|||.+|+.+++.
T Consensus 14 ~~~~v~~wL~si~c~qY~~~F~eN~I~g~d~L~eLd~e~LkElGI~kvGdRirIlk~vk~ 73 (85)
T 1ow5_A 14 DLPFVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKS 73 (85)
T ss_dssp --CHHHHHHHHHSCTHHHHHHHHHTCCCHHHHHHCCHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHcCChhHHHHHHHcCCCcHHHHHHcCHHHHHHhCCCcccHHHHHHHHHHH
Confidence 3448999999999999999999999999 99999999999999999 9999999999864
No 36
>2y9u_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle, mutations, A syndrome; 1.60A {Homo sapiens} PDB: 1rg6_A
Probab=99.33 E-value=1.9e-12 Score=92.90 Aligned_cols=58 Identities=24% Similarity=0.339 Sum_probs=54.1
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCCHHHHhcCCCCcchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMTDEDLKALGIPMGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LTeeDLKeLGI~lGpRKKIL~aIq~ 195 (197)
.+.+|.+||+.+++++|.+.|.+.++ +++.+..||.+||..|||+.|||+||+.+|+.
T Consensus 3 ~d~sv~~WLd~i~m~~Y~d~F~~~g~~s~~~v~~lt~eDL~~~GIt~ghqkkIl~siq~ 61 (69)
T 2y9u_A 3 TDCSIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLASLKIPEQFRHAIWKGILD 61 (69)
T ss_dssp CCCBHHHHHHTTTCGGGHHHHHTTTCCBHHHHTTCCHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHcCChHHHHHHHHcCCCcHHHHHHcCHHHHHhcCCChhhHHHHHHhHHH
Confidence 56799999999999999999998765 69999999999999999999999999999975
No 37
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=99.31 E-value=2.6e-12 Score=102.14 Aligned_cols=59 Identities=34% Similarity=0.511 Sum_probs=54.9
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcC-HHHhcCCCHHHH-hcCCCC-cchHHHHHHHHHhc
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVD-MTALLHMTDEDL-KALGIP-MGPRKKILLALESR 196 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeID-gdaLl~LTeeDL-KeLGI~-lGpRKKIL~aIq~~ 196 (197)
...+|.+||.++||++|.+.|.+++++ ++.|..||++|| ++|||+ +|||+||+.+|+++
T Consensus 87 ~~~~v~~WL~~i~L~qY~~~F~~~g~~~~~~l~~lt~~dLl~~lGI~~~gHrkrIl~ai~~~ 148 (148)
T 2kiv_A 87 HPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKIAEVELINVLKINLIGHRKRILASLGDR 148 (148)
T ss_dssp CCSSHHHHHHTTTCCTHHHHHHHHTCCSHHHHTSCCHHHHHHHTCCCCHHHHHHHHHHHTCC
T ss_pred CcchHHHHHHHCCcHHHHHHHHHcCCChHHHHHhCCHHHHHHhCCCCChhHHHHHHHHHhhC
Confidence 457899999999999999999999995 799999999997 999998 99999999999875
No 38
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A
Probab=99.30 E-value=3e-12 Score=96.21 Aligned_cols=55 Identities=31% Similarity=0.486 Sum_probs=51.3
Q ss_pred cchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 139 ETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 139 ~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
..+|..||++|+|++|.+.|.. ++++.+..||++||+++||+ .|+|+||+.+|+.
T Consensus 18 ~~~V~~WL~sLrLhKY~~~F~~--~~~~~l~~LtdedL~~~GVta~GaRrKil~aI~~ 73 (88)
T 2d3d_A 18 LKNIPMWLKSLRLHKYSDALSG--TPWIELIYLDDETLEKKGVLALGARRKLLKAFGI 73 (88)
T ss_dssp HTCHHHHHHHTTCGGGHHHHTT--SCHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHcccchhHHHHhc--CCHHHHHHcCHHHHHHcCCccHhHHHHHHHHHHH
Confidence 4589999999999999999974 79999999999999999999 9999999999874
No 39
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=99.28 E-value=2e-12 Score=102.74 Aligned_cols=58 Identities=34% Similarity=0.519 Sum_probs=52.7
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcCH-HHhc--CCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVDM-TALL--HMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeIDg-daLl--~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+++||++|.+.|.++++|+ +.+. .||++||++|||+ +|||+||+.+|+.
T Consensus 13 ~~~~V~~WL~~igL~~Y~~~F~~~g~d~~~~l~~~~lt~~DL~~lGI~~~ghRkkil~ai~~ 74 (148)
T 2kiv_A 13 SVQTVGQWLESIGLPQYENHLMANGFDNVQAMGSNVMEDQDLLEIGILNSGHRQRILQAIQL 74 (148)
T ss_dssp -CCBHHHHHHHHSCTTSHHHHHHTTTTBGGGGTSSCCCHHHHHHHCCSSTTSHHHHHHHHHH
T ss_pred CcchHHHHHHHCCCHHHHHHHHHcCCCHHHHhhhccCCHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 5578999999999999999999999997 5555 9999999999999 9999999999975
No 40
>2y9t_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle; NMR {Homo sapiens}
Probab=99.26 E-value=5.1e-12 Score=93.52 Aligned_cols=58 Identities=24% Similarity=0.339 Sum_probs=54.0
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCCHHHHhcCCCCcchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMTDEDLKALGIPMGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LTeeDLKeLGI~lGpRKKIL~aIq~ 195 (197)
.+.+|.+||+.+++++|.+.|.+.++ +++.+..||.+||..|||+.|||+||+.+|+.
T Consensus 5 ~~~SV~~WLd~i~m~~Y~d~F~~~G~~sl~~V~~lt~eDL~~mGIt~gHqkkIl~siq~ 63 (82)
T 2y9t_A 5 TDCSIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLASLKIPEQFRHAIWKGILD 63 (82)
T ss_dssp CSSBHHHHHHHHTCGGGHHHHHTTTCCBSGGGTTCCHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCchHHHHHHHHcCCCcHHHHHhcCHHHHHhcCCChhhHHHHHhhHHH
Confidence 56799999999999999999998765 69999999999999999999999999999875
No 41
>2b6g_A VTS1P; alpha-helix, pentaloop, hairpin, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.21 E-value=8.5e-12 Score=98.27 Aligned_cols=56 Identities=30% Similarity=0.462 Sum_probs=51.6
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
...+|.+||+.|+|++|.+.| +.++++.|..||++||+++||+ .|+|+||+.+|+.
T Consensus 48 ~~~dV~~WL~sLrL~KY~~~F--~~~~~d~l~~LTeeDL~~lGVta~GaRrKlL~AI~~ 104 (119)
T 2b6g_A 48 LLKNIPMWLKSLRLHKYSDAL--SGTPWIELIYLDDETLEKKGVLALGARRKLLKAFGI 104 (119)
T ss_dssp HHHCHHHHHHHHTCHHHHHHH--TTSCHHHHTTCCHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHCCChhHHHHH--ccCCHHHHHhcCHHHHHHCCCCccccHHHHHHHHHH
Confidence 456889999999999999999 4689999999999999999999 9999999998864
No 42
>2es6_A VTS1P; SAM domain, protein structure, gene regulation; NMR {Saccharomyces cerevisiae} PDB: 2ese_A
Probab=99.20 E-value=1.1e-11 Score=95.24 Aligned_cols=55 Identities=31% Similarity=0.486 Sum_probs=51.3
Q ss_pred cchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 139 ETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 139 ~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
..+|..||++|+|.+|.+.|.. ++++.+..||++||+++||+ .|+|+||+.+|+.
T Consensus 31 ~~dV~~WLksLrLhKY~~~F~~--~~~~~l~~LTdedL~~~GVta~GARrKiL~aI~~ 86 (101)
T 2es6_A 31 LKNIPMWLKSLRLHKYSDALSG--TPWIELIYLDDETLEKKGVLALGARRKLLKAFGI 86 (101)
T ss_dssp HTCHHHHHHTTTCCCTHHHHTT--SCHHHHTTCCHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHccCcchHHHHcc--CCHHHHHhcCHHHHHHcCCccHhHHHHHHHHHHH
Confidence 3589999999999999999965 79999999999999999999 9999999999874
No 43
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=99.13 E-value=2.6e-11 Score=106.08 Aligned_cols=66 Identities=27% Similarity=0.292 Sum_probs=60.7
Q ss_pred CCcccCCCCcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHh-cCCCC-cchHHHHHHHHHh
Q 029178 130 SKKKDQQKAETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLK-ALGIP-MGPRKKILLALES 195 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLK-eLGI~-lGpRKKIL~aIq~ 195 (197)
+.++...|..++|+.||+.+||++|.+.|.++.+|+..|+.||++||+ ++||. ++||+||+.+|++
T Consensus 11 ~~~p~~~W~~e~V~~WLe~~GL~~Y~~~f~~n~~dG~~Ll~lt~~dLe~eLGI~nplHRkKL~laI~e 78 (265)
T 3tad_C 11 LDMPFAKWTKEQVCSWLAEQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKLQLALQA 78 (265)
T ss_dssp ---CGGGSCHHHHHHHHHHTTCCTTHHHHTTTCSCSHHHHHSCHHHHHHHTCCCSHHHHHHHHHHHHH
T ss_pred CCCChhhCChHHHHHHHHHHCHHHHHHHHHHhCCchHHHHhCCHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 445688999999999999999999999999999999999999999996 99999 9999999999975
No 44
>1oxj_A RNA-binding protein smaug; SAM domain, PHAT domain; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 a.118.1.13
Probab=98.99 E-value=3.4e-10 Score=94.11 Aligned_cols=56 Identities=25% Similarity=0.498 Sum_probs=51.7
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCCcchHHHHHHHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIPMGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~lGpRKKIL~aIq~ 195 (197)
...+|..||++|+|.+|.+.|.. ++++.+..||++||+++||+.|+|+||+.+|+.
T Consensus 6 ~~~dV~~WLksLrLhKY~~~F~~--~~~e~~~~LTdedL~~~GVT~GARrKIL~aIq~ 61 (173)
T 1oxj_A 6 GMSGIGLWLKSLRLHKYIELFKN--MTYEEMLLITEDFLQSVGVTKGASHKLALCIDK 61 (173)
T ss_dssp TCTTHHHHHHHTTCGGGGGGGTT--CCHHHHTTCCHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHcccchhHHHHcc--CCHHHHHhcCHHHHHHCCCchHHHHHHHHHHHH
Confidence 34699999999999999999974 789999999999999999999999999999864
No 45
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=98.91 E-value=9.8e-10 Score=96.16 Aligned_cols=61 Identities=26% Similarity=0.292 Sum_probs=56.8
Q ss_pred CCCCcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 135 QQKAETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 135 ~~W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
..++...|.+||.++||.+|...|.++.||+..|.+||++||+++||+ .+||++|+.+|+.
T Consensus 88 ~~~d~~wv~~WL~~IGL~QY~~~F~~~~iDg~~L~~LT~~DL~~LGIt~~~HR~kil~aI~~ 149 (265)
T 3tad_C 88 GKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVVSVLHHLSIKRAIQV 149 (265)
T ss_dssp GGCCHHHHHHHHHHHTCGGGHHHHHHHTCCHHHHHTCBHHHHHHTTCCBHHHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHcCcHHHHHHHHHcCCCHHHhcccCHHHHHHcCCCcHHhHHHHHHHHHH
Confidence 345677889999999999999999999999999999999999999999 9999999999875
No 46
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=2.6e-09 Score=79.74 Aligned_cols=66 Identities=23% Similarity=0.241 Sum_probs=60.9
Q ss_pred CCCcccCCCCcchHHHHHHhCCChh-hHHHHhhcCcCHHHhcCCCHHHHh-cCCCCcchHHHHHHHHH
Q 029178 129 ASKKKDQQKAETSVDGFLRSLGLEK-YSITFQAEEVDMTALLHMTDEDLK-ALGIPMGPRKKILLALE 194 (197)
Q Consensus 129 ~~rk~~~~W~~~~V~~wLksLGL~k-Y~~~F~~eeIDgdaLl~LTeeDLK-eLGI~lGpRKKIL~aIq 194 (197)
.++++...|+..+|+.||+.+||++ |.+.|++|.||++.|+.|++++|. ++|++.=+.+||+.+|+
T Consensus 10 ~pP~dLs~lSv~EVs~~Lr~igL~e~vv~~F~~e~IDG~lL~~L~ee~L~edf~ls~Lq~kKi~~fI~ 77 (84)
T 2dkz_A 10 QPPADLSGLSIEEVSKSLRFIGLSEDVISFFVTEKIDGNLLVQLTEEILSEDFKLSKLQVKKIMQFIN 77 (84)
T ss_dssp CCCSCCSSCCHHHHHHHGGGTCCCHHHHHHHHTTTCCHHHHHHCCHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred CCchhhhhcCHHHHHHHHHHcCCcHHHHHHHHHHccchHHHHhCCHHHHHhhcCCCHHHHHHHHHHHh
Confidence 4577889999999999999999997 579999999999999999999996 69999889999999985
No 47
>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A
Probab=98.69 E-value=8.6e-09 Score=77.13 Aligned_cols=64 Identities=13% Similarity=0.102 Sum_probs=58.9
Q ss_pred cccCCCCcchHHHHH-HhCCChh---hHHHHhhcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 132 KKDQQKAETSVDGFL-RSLGLEK---YSITFQAEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 132 k~~~~W~~~~V~~wL-ksLGL~k---Y~~~F~~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
.....|+...|+.|+ ..+|+.. .++.|.+|.|+|+.|+.|+.+|||+|+|. .|.|.++...|+.
T Consensus 7 ~~v~~Wt~~~V~~W~~~~lg~~d~d~~~~~f~~ndItG~vL~eL~leDlKEL~i~s~~~r~~lk~~In~ 75 (85)
T 1uqv_A 7 EDFSQWSVDDVITWCISTLEVEETDPLCQRLRENDIVGDLLPELCLQDCQDLCDGDLNKAIKFKILINK 75 (85)
T ss_dssp CCTTTCCHHHHHHHHHHHHSSCTTSTHHHHHHHSCCCGGGHHHHHHHHHHHTSSSCHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHhCCCCccHHHHHHHHcCCchhhHHHcCHHHHHHhCchHHHHHHHHHHHHHH
Confidence 346789999999999 8889876 78999999999999999999999999999 9999999998874
No 48
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=98.65 E-value=2.7e-08 Score=89.65 Aligned_cols=64 Identities=22% Similarity=0.289 Sum_probs=59.9
Q ss_pred ccCCCCcchHHHHHHh-CCChh-hHHHHhhcCcCHHHhcCCCHHHHh-cCCCC-cchHHHHHHHHHhc
Q 029178 133 KDQQKAETSVDGFLRS-LGLEK-YSITFQAEEVDMTALLHMTDEDLK-ALGIP-MGPRKKILLALESR 196 (197)
Q Consensus 133 ~~~~W~~~~V~~wLks-LGL~k-Y~~~F~~eeIDgdaLl~LTeeDLK-eLGI~-lGpRKKIL~aIq~~ 196 (197)
+...|...+|+.||+. +||.. |...|.++.+++..|+.||++||. ++||. +.||+||..+|++.
T Consensus 35 Pfs~W~~~~V~aWLe~~iGmp~~Yv~~~r~nvkSG~~Ll~LSd~dLekeLGI~nPLHRKKL~LAIqel 102 (334)
T 3tac_B 35 PFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEM 102 (334)
T ss_dssp CGGGCCHHHHHHHHHHTTCCCHHHHHHHHHHCCSHHHHHTCCHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ChhhCCcHHHHHHHHHHhcChHHHHHHHHHHccchHHHHhCCHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 3788999999999999 89987 999999999999999999999996 99999 99999999999863
No 49
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=98.34 E-value=1.3e-07 Score=76.90 Aligned_cols=57 Identities=19% Similarity=0.258 Sum_probs=52.2
Q ss_pred cCCCCcchHHHHHHh-CCChhhHHHHhhcCcCHHHhcCCCHHH----HhcCCCC-cchHHHHH
Q 029178 134 DQQKAETSVDGFLRS-LGLEKYSITFQAEEVDMTALLHMTDED----LKALGIP-MGPRKKIL 190 (197)
Q Consensus 134 ~~~W~~~~V~~wLks-LGL~kY~~~F~~eeIDgdaLl~LTeeD----LKeLGI~-lGpRKKIL 190 (197)
...|+..+|..||.. +||.+|.+.|.++.|||..|+.|+..+ +.+|||. .+||.||.
T Consensus 78 V~nWTvedV~~WL~~~v~LpqY~~~Fr~~~IdG~~LprL~~~~~~~L~~~LGI~~~~hR~Kl~ 140 (150)
T 2l5y_A 78 VHNWTLEDTLQWLIEFVELPQYEKNFRDNNVKGTTLPRIAVHEPSFMISQLKISDRSHRQKLQ 140 (150)
T ss_dssp HHHCCHHHHHHHHHHHTCCTTSHHHHHHHHCSSSTTTTCCSSSCCSTTTTSSCCCHHHHHHHH
T ss_pred chhCCHHHHHHHHHHcCCcHHHHHHHHHcCCCHHHhhhhhhcchHHHHHHhCCCCHHHHHHHH
Confidence 457999999999988 599999999999999999999999876 4599998 99999997
No 50
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=98.27 E-value=2e-07 Score=75.89 Aligned_cols=57 Identities=18% Similarity=0.224 Sum_probs=51.6
Q ss_pred cCCCCcchHHHHHHhC-CChhhHHHHhhcCcCHHHhcCCCHHH--H--hcCCCC-cchHHHHH
Q 029178 134 DQQKAETSVDGFLRSL-GLEKYSITFQAEEVDMTALLHMTDED--L--KALGIP-MGPRKKIL 190 (197)
Q Consensus 134 ~~~W~~~~V~~wLksL-GL~kY~~~F~~eeIDgdaLl~LTeeD--L--KeLGI~-lGpRKKIL 190 (197)
...|+..+|..||... +|.+|.+.|.++.|||.+|+.|+.++ + .+|||. .+||.||-
T Consensus 78 V~nWTvedV~~WL~~~v~LpqY~~~Fr~~~I~G~~LprLa~~~~~~L~~~LgI~~~~hRqKl~ 140 (150)
T 2k60_A 78 VYNWTVDEVVQWLITYVELPQYEETFRKLQLSGHAMPRLAVTNTTMTGTVLKMTDRSHRQKLQ 140 (150)
T ss_dssp HHHCCHHHHHHHHHHHHCCTTHHHHHHHHCCSTTHHHHHSSCHHHHCSSCSCSCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHcCCcHHHHHHHHHcCCCHHHHHhhccccHHHHHHhcCCCCHHHHHHHH
Confidence 4579999999999554 99999999999999999999999986 4 799999 99999987
No 51
>1dxs_A P53-like transcription factor; P73 SAM-like domain, gene regulation, P53 P63 homologue, sterIle alpha motif, tumour supressor; 2.54A {Homo sapiens} SCOP: a.60.1.2 PDB: 1cok_A
Probab=98.20 E-value=2.7e-06 Score=63.02 Aligned_cols=59 Identities=32% Similarity=0.383 Sum_probs=52.1
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCCHHHHhcCCCCcchHHHHHHHHHhc
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMTDEDLKALGIPMGPRKKILLALESR 196 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LTeeDLKeLGI~lGpRKKIL~aIq~~ 196 (197)
.+.+|+.||..|||..|.+.|.++++ ++..|-.++-+||..|.|+-.+|.||..++.+.
T Consensus 5 ~D~Sv~s~Lt~LGc~~~Id~F~~qgl~~i~qL~~~~ledL~~mkIpe~~R~kIWk~l~e~ 64 (80)
T 1dxs_A 5 ADPSLVSFLTGLGCPNCIEYFTSQGLQSIYHLQNLTIEDLGALKIPEQYRMTIWRGLQDL 64 (80)
T ss_dssp ---CHHHHHHHTTCTTSHHHHHTTTCCCHHHHHTCCHHHHHHTTCCTTTHHHHHHHHHHC
T ss_pred CCccHHHHHHhcCchHHHHHHHHcCcccchhhccCCHHHHHhCCCCHHHHHHHHhhHHHh
Confidence 57899999999999999999998765 699999999999999999999999999988653
No 52
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=98.18 E-value=1.9e-06 Score=77.80 Aligned_cols=58 Identities=28% Similarity=0.328 Sum_probs=53.0
Q ss_pred CcchHH-HHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHH-hcCCCC-cchHHHHHHHHHh
Q 029178 138 AETSVD-GFLRSLGLEKYSITFQAEEVDMTALLHMTDEDL-KALGIP-MGPRKKILLALES 195 (197)
Q Consensus 138 ~~~~V~-~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDL-KeLGI~-lGpRKKIL~aIq~ 195 (197)
+..-|. .||.++||.+|...|..+.||+..|-+||.+|| ..+||+ ..||++|+.+|+.
T Consensus 161 dh~WV~~~WL~dIGLpQY~~~F~~~~VDgR~L~~Lt~~DL~~~LgIt~~~Hr~sI~~gI~~ 221 (334)
T 3tac_B 161 NHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMC 221 (334)
T ss_dssp CHHHHHHTHHHHTTCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred ccCcchhhhccccChHHhHHHHHhcCcchhhhhhccHHHHHhccCCCcHHHHHHHHHHHHH
Confidence 344556 899999999999999999999999999999999 699999 9999999999864
No 53
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=3.5e-06 Score=63.61 Aligned_cols=66 Identities=11% Similarity=0.148 Sum_probs=51.5
Q ss_pred CCCcccCCCCcchHHHHHHhCCChhhHHHHh-hcCcCHHHhcCCCHHHHhcCCCC-cchHHHHHHHHHh
Q 029178 129 ASKKKDQQKAETSVDGFLRSLGLEKYSITFQ-AEEVDMTALLHMTDEDLKALGIP-MGPRKKILLALES 195 (197)
Q Consensus 129 ~~rk~~~~W~~~~V~~wLksLGL~kY~~~F~-~eeIDgdaLl~LTeeDLKeLGI~-lGpRKKIL~aIq~ 195 (197)
+.+++...|+..+|++||+.+|+.+ ++.|. +|+|||.+|+.|||+||+..--. .---.||-..|+.
T Consensus 14 ps~seV~~Wsp~~VadWLkk~g~~~-cd~lv~Kh~IDG~~lL~LtE~Dlrk~Pkl~~p~~~k~~q~in~ 81 (90)
T 2eap_A 14 PFRSEVLGWDPDSLADYFKKLNYKD-CEKAVKKYHIDGARFLNLTENDIQKFPKLRVPILSKLSQEINK 81 (90)
T ss_dssp CCHHHHTTCCTTTHHHHHHHTTCHH-HHHHHHHTTCCHHHHHTCCHHHHTTSCTTTHHHHHHHHHHHHT
T ss_pred ccCccccccCHHHHHHHHHHcCCch-HHHHHHHhccCchhhhcccHHHhccCCccccHHHHHHHHHHhc
Confidence 3567778999999999999999999 88886 78899999999999999972221 3334455555543
No 54
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=97.76 E-value=2.8e-05 Score=56.54 Aligned_cols=53 Identities=21% Similarity=0.495 Sum_probs=47.8
Q ss_pred HHHHhCC-----ChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCCcchHHHHHHHHHhc
Q 029178 144 GFLRSLG-----LEKYSITFQAEEVDMTALLHMTDEDLKALGIPMGPRKKILLALESR 196 (197)
Q Consensus 144 ~wLksLG-----L~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~lGpRKKIL~aIq~~ 196 (197)
+|+-..| +++|...|.++.|+-+.|..|+.+-|++|||..|+..+|++++..+
T Consensus 7 ~FFl~aGv~~~~c~rYA~~F~~~ri~e~mL~Dl~~~~Lr~LGi~eGDIIrVmk~l~~k 64 (72)
T 3idw_A 7 EFFLNCGVDVSNCQRYTINFDREQLTEDMMPDINNSMLRTLGLREGDIVRVMKHLDKK 64 (72)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHTTCCGGGGGGCCHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCChHHHHHHHHHHHHccCCHHHHhhCCHHHHHHcCCchhhHHHHHHHHHHH
Confidence 5666777 4689999999999999999999999999999999999999998754
No 55
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=95.77 E-value=0.0047 Score=46.05 Aligned_cols=54 Identities=22% Similarity=0.230 Sum_probs=41.7
Q ss_pred CCcccCCCCcchHHHHHHhCCChhhH---HHHhhcCcCHHHhcCCCHHHHhc-CCCCcch
Q 029178 130 SKKKDQQKAETSVDGFLRSLGLEKYS---ITFQAEEVDMTALLHMTDEDLKA-LGIPMGP 185 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksLGL~kY~---~~F~~eeIDgdaLl~LTeeDLKe-LGI~lGp 185 (197)
-++++..|+..+|..||.-.+ .+|. ..|....+||..|+.||.+|+.. ++. .|+
T Consensus 8 l~~DP~~WS~~~V~~WL~w~~-~ef~L~~i~~~~f~mdGk~Lc~Lt~edF~~~~p~-~Gd 65 (93)
T 2qar_B 8 LRLQPIYWSRDDVAQWLKWAE-NEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPH-SGD 65 (93)
T ss_dssp GCSCGGGCCHHHHHHHHHHHH-HHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHCTT-THH
T ss_pred CCCChhhCCHHHHHHHHHHHH-HhcCCCCcchhcCCCCHHHHHcCCHHHHhhhCCc-chH
Confidence 367889999999999997665 4554 23556789999999999999886 443 454
No 56
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=95.67 E-value=0.0027 Score=46.02 Aligned_cols=54 Identities=13% Similarity=-0.068 Sum_probs=40.4
Q ss_pred CCcccCCCCcchHHHHHHhCCChhh-HH----HHhhcCcCHHHhcCCCHHHHhc-CCCCcch
Q 029178 130 SKKKDQQKAETSVDGFLRSLGLEKY-SI----TFQAEEVDMTALLHMTDEDLKA-LGIPMGP 185 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksLGL~kY-~~----~F~~eeIDgdaLl~LTeeDLKe-LGI~lGp 185 (197)
-++++..|+...|..||.-. ..+| .+ .|....+||.+|+.||.+|+.+ .+ ..|+
T Consensus 7 i~~dP~~Ws~~~V~~WL~w~-~~e~~l~l~~~~~~~f~m~G~~Lc~ls~edF~~~~p-~~Gd 66 (82)
T 1sv0_C 7 LPLDPRDWTRADVWKWLINM-AVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRVP-VGGK 66 (82)
T ss_dssp SBSSGGGCCHHHHHHHHHHH-HHHHTCCCCTHHHHTCCSCHHHHHHCCHHHHHHHCT-TTHH
T ss_pred CCCChhhCCHHHHHHHHHHH-HHHhCCCCCCCccccCCCCHHHHHhCCHHHHHhhCC-CchH
Confidence 46788999999999999644 3333 21 2566679999999999999886 44 3454
No 57
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=95.38 E-value=0.0046 Score=45.81 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=37.5
Q ss_pred CCcccCCCCcchHHHHHHhCCChhhH---HHHhhcCcCHHHhcCCCHHHHhc
Q 029178 130 SKKKDQQKAETSVDGFLRSLGLEKYS---ITFQAEEVDMTALLHMTDEDLKA 178 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLksLGL~kY~---~~F~~eeIDgdaLl~LTeeDLKe 178 (197)
-++++..|+...|..||.-. ..+|. ..|...++||.+|+.||.+|+..
T Consensus 8 l~~DP~~WS~~~V~~WL~w~-~~ef~L~~~~~~~f~mdGk~Lc~Ls~edF~~ 58 (89)
T 1ji7_A 8 LRLQPIYWSRDDVAQWLKWA-ENEFSLRPIDSNTFEMNGKALLLLTKEDFRY 58 (89)
T ss_dssp GCSCGGGCCHHHHHHHHHHH-HHHTTCSCCCTTTTCSCHHHHTTCCHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHH-HHhcCCCCCchhcCCCCHHHHHcCCHHHHHh
Confidence 46788999999999999655 33343 23455679999999999999874
No 58
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=93.55 E-value=0.064 Score=40.91 Aligned_cols=41 Identities=15% Similarity=0.237 Sum_probs=36.9
Q ss_pred CCcchHHHHHHhCCChhh-HHHHhhcCcCHHHhcCCCHHHHhcC
Q 029178 137 KAETSVDGFLRSLGLEKY-SITFQAEEVDMTALLHMTDEDLKAL 179 (197)
Q Consensus 137 W~~~~V~~wLksLGL~kY-~~~F~~eeIDgdaLl~LTeeDLKeL 179 (197)
-...+|..||+.-|++.| ++.|. .+++..|+.|+.+||+.+
T Consensus 24 Ssp~EV~~WL~~kgFS~~tv~~Lg--~ltGaqLf~Ltk~eL~~v 65 (99)
T 1wwu_A 24 SGPDEVRAWLEAKAFSPRIVENLG--ILTGPQLFSLNKEELKKV 65 (99)
T ss_dssp CCHHHHHHHHHHHTCCTTHHHHTT--SSCHHHHHTCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHc--CCCHHHHHcCCHHHHHHH
Confidence 367899999999999998 88887 889999999999999963
No 59
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.04 E-value=0.15 Score=38.92 Aligned_cols=40 Identities=15% Similarity=0.352 Sum_probs=36.4
Q ss_pred CcchHHHHHHhCCChhh-HHHHhhcCcCHHHhcCCCHHHHhcC
Q 029178 138 AETSVDGFLRSLGLEKY-SITFQAEEVDMTALLHMTDEDLKAL 179 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY-~~~F~~eeIDgdaLl~LTeeDLKeL 179 (197)
..++|..||+.-|++.| ++.|. .+++..|+.|+.+||+.+
T Consensus 35 sp~EV~~WL~~kgFS~~tv~~Lg--~ltGaqLl~Ltk~eL~~v 75 (99)
T 2e8m_A 35 TPEDVKTWLQSKGFNPVTVNSLG--VLNGAQLFSLNKDELRTV 75 (99)
T ss_dssp CTTHHHHHHHHHTCCHHHHHHTS--SSCHHHHHHCCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHc--CCCHHHHHcCCHHHHHHH
Confidence 66899999999999998 88886 889999999999999973
No 60
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.57 E-value=0.3 Score=36.56 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=36.8
Q ss_pred CCcccCCCCcchHHHHHH----hCCChhhHHHHhhc-CcCHHHhcCCCHHHHhcC
Q 029178 130 SKKKDQQKAETSVDGFLR----SLGLEKYSITFQAE-EVDMTALLHMTDEDLKAL 179 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLk----sLGL~kY~~~F~~e-eIDgdaLl~LTeeDLKeL 179 (197)
-++++..|+...|..||. +.+|... .+..- .+||.+|+.|+.+|+.++
T Consensus 20 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v--~~~~F~~m~G~~LC~ls~edF~~~ 72 (98)
T 1x66_A 20 VPADPTLWTQEHVRQWLEWAIKEYSLMEI--DTSFFQNMDGKELCKMNKEDFLRA 72 (98)
T ss_dssp CCSSGGGCCTTHHHHHHHHHHHHTTCCSC--CGGGGTTCCHHHHHHCCHHHHHTT
T ss_pred CCCChhhcCHHHHHHHHHHHHHhcCCCCC--ChhhCCCCCHHHHHcCCHHHHHHH
Confidence 356889999999999994 4555332 23443 699999999999998765
No 61
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=89.73 E-value=0.22 Score=36.49 Aligned_cols=47 Identities=21% Similarity=0.222 Sum_probs=35.3
Q ss_pred CCcccCCCCcchHHHHHH----hCCChhhHHHHhhcCcCHHHhcCCCHHHHhc
Q 029178 130 SKKKDQQKAETSVDGFLR----SLGLEKYSITFQAEEVDMTALLHMTDEDLKA 178 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLk----sLGL~kY~~~F~~eeIDgdaLl~LTeeDLKe 178 (197)
-++++..|+...|..||. +.+|..- .|..-.+||.+|+.||.+|+..
T Consensus 6 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i--~~~~F~m~G~~LC~ls~edF~~ 56 (85)
T 1sv0_A 6 LPSDPRLWSREDVLVFLRFCVREFDLPKL--DFDLFQMNGKRLCLLTRADFGH 56 (85)
T ss_dssp SCSSGGGCCHHHHHHHHHHHHHHTTCCCC--CGGGGCSCHHHHTTCCHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHccCCCCC--ChhhCCCCHHHHHcCCHHHHHH
Confidence 367789999999999995 4455331 1233369999999999999774
No 62
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.18 E-value=0.23 Score=37.08 Aligned_cols=48 Identities=19% Similarity=0.214 Sum_probs=35.7
Q ss_pred CcccCCCCcchHHHHHHhC----CChhhHHHHhhcCcCHHHhcCCCHHHHhc
Q 029178 131 KKKDQQKAETSVDGFLRSL----GLEKYSITFQAEEVDMTALLHMTDEDLKA 178 (197)
Q Consensus 131 rk~~~~W~~~~V~~wLksL----GL~kY~~~F~~eeIDgdaLl~LTeeDLKe 178 (197)
+.++..|+...|..||.-. +++--...|..-.+||.+|+.|+.+|+..
T Consensus 21 ~~dP~~Ws~~~V~~WL~Wavke~~~dl~~i~~~~f~m~G~~LC~mskedF~~ 72 (92)
T 2e8p_A 21 GEQPQFWSKTQVLDWISYQVEKNKYDASAIDFSRCDMDGATLCNCALEELRL 72 (92)
T ss_dssp SSCGGGCCHHHHHHHHHHHHHHTTCCCSSCCTTTCCCCSHHHHHSCHHHHHH
T ss_pred CCChhhcCHHHHHHHHHHHHHHhCCCCCCCChhhcCCCHHHHHcCCHHHHHH
Confidence 6789999999999999533 23211223444579999999999999775
No 63
>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.92 E-value=0.37 Score=35.89 Aligned_cols=47 Identities=15% Similarity=0.198 Sum_probs=36.7
Q ss_pred CCcccCCCCcchHHHHH----HhCCChhhHHHHhhcCcCHHHhcCCCHHHHhc
Q 029178 130 SKKKDQQKAETSVDGFL----RSLGLEKYSITFQAEEVDMTALLHMTDEDLKA 178 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wL----ksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKe 178 (197)
-+.++..|+...|..|| ++.+|...- +..-.+||.+|+.||.+|+..
T Consensus 20 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~--~~~f~m~G~~LC~lskedF~~ 70 (96)
T 2dkx_A 20 ITADPMDWSPSNVQKWLLWTEHQYRLPPMG--KAFQELAGKELCAMSEEQFRQ 70 (96)
T ss_dssp CCSCGGGCCSSTHHHHHHHHHHHTTCCCCH--HHHSSCCHHHHHHSCHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHhcCCCCCC--cccCCCCHHHHHhCCHHHHHH
Confidence 46678899999999999 455665432 334469999999999999775
No 64
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=86.10 E-value=0.25 Score=36.59 Aligned_cols=47 Identities=9% Similarity=0.092 Sum_probs=35.5
Q ss_pred CCcccCCCCcchHHHHHH----hCCChhhHHHHhhcCcCHHHhcCCCHHHHhc
Q 029178 130 SKKKDQQKAETSVDGFLR----SLGLEKYSITFQAEEVDMTALLHMTDEDLKA 178 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLk----sLGL~kY~~~F~~eeIDgdaLl~LTeeDLKe 178 (197)
-++++..|+...|..||. +.+|... .|..-.+||..|+.||.+|+..
T Consensus 19 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v--~~~~f~m~G~~LC~ls~edF~~ 69 (91)
T 1sxd_A 19 IPYDPIHWSTDQVLHWVVWVMKEFSMTDI--DLTTLNISGRELCSLNQEDFFQ 69 (91)
T ss_dssp CCSSGGGCCHHHHHHHHHHHHHHTTCCCS--CSGGGCSCHHHHHHSCHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHccCCCCC--ChhhCCCCHHHHHcCCHHHHHH
Confidence 356788999999999994 4455422 2334479999999999999775
No 65
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1
Probab=84.57 E-value=1.3 Score=33.06 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=36.4
Q ss_pred CCcccCCCCcchHHHHHH----hCCChhhHHHHhhc-CcCHHHhcCCCHHHHhcC
Q 029178 130 SKKKDQQKAETSVDGFLR----SLGLEKYSITFQAE-EVDMTALLHMTDEDLKAL 179 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLk----sLGL~kY~~~F~~e-eIDgdaLl~LTeeDLKeL 179 (197)
-++++..|+...|..||. +.+|... .+..- .+||.+|+.||.+|+...
T Consensus 23 ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i--~~~~F~~m~G~~LC~lt~edF~~~ 75 (97)
T 1sxe_A 23 VPADPTLWSTDHVRQWLEWAVKEYGLPDV--NILLFQNIDGKELCKMTKDDFQRL 75 (97)
T ss_dssp SCSSTTSCCHHHHHHHHHHHHHHHTCSSC--CGGGSTTCCHHHHTTCCHHHHTTT
T ss_pred CCcchhccCHHHHHHHHHHHHHhcCCCCC--CHHhcCCCCHHHHHhCCHHHHHHH
Confidence 356789999999999994 4455322 23444 699999999999998764
No 66
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=81.56 E-value=0.48 Score=36.21 Aligned_cols=47 Identities=23% Similarity=0.204 Sum_probs=34.8
Q ss_pred CCcccCCCCcchHHHHHH----hCCChhhHHHHhhcCcCHHHhcCCCHHHHhc
Q 029178 130 SKKKDQQKAETSVDGFLR----SLGLEKYSITFQAEEVDMTALLHMTDEDLKA 178 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLk----sLGL~kY~~~F~~eeIDgdaLl~LTeeDLKe 178 (197)
-++++..|+...|..||. +.+|... .|..-.+||..|+.|+.+|+..
T Consensus 37 ip~DP~~WS~~~V~~WL~W~~~ef~L~~v--~~~~F~m~G~~LC~ls~edF~~ 87 (110)
T 2jv3_A 37 IPKDPRQWTETHVRDWVMWAVNEFSLKGV--DFQKFCMSGAALCALGKECFLE 87 (110)
T ss_dssp CCSSSTTCCHHHHHHHHHHHHHHHTCCCC--CTTTTCCCHHHHHHTHHHHHHH
T ss_pred CCCChHhCCHHHHHHHHHHHHHhcCCCCC--ChhcCCCCHHHHHhCCHHHHHH
Confidence 356788999999999994 4444321 2233369999999999999775
No 67
>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli}
Probab=79.77 E-value=0.75 Score=38.74 Aligned_cols=46 Identities=22% Similarity=0.252 Sum_probs=34.4
Q ss_pred CcccCCCCcchHHHHHHh----CCChhhHHHHhhcCcCHHHhcCCCHHHHhc
Q 029178 131 KKKDQQKAETSVDGFLRS----LGLEKYSITFQAEEVDMTALLHMTDEDLKA 178 (197)
Q Consensus 131 rk~~~~W~~~~V~~wLks----LGL~kY~~~F~~eeIDgdaLl~LTeeDLKe 178 (197)
+.++..|+...|..||.- .+|... .|..-.+++..|+.||.+|+.+
T Consensus 9 p~dP~~Wt~~~V~~Wl~w~~~~f~l~~~--~~~~f~~~G~~Lc~m~~~~F~~ 58 (241)
T 2qb0_B 9 RLQPIYWSRDDVAQWLKWAENEFSLRPI--DSNTFEMNGKALLLLTKEDFRY 58 (241)
T ss_dssp GSCGGGCCHHHHHHHHHHHHHHTTCSCC--CTTTTCSCHHHHTTCCHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHHHhcCCCCC--CHHhcCCChHHHHHcCHHHHHh
Confidence 567889999999999954 445332 1233348999999999999775
No 68
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=68.65 E-value=3.9 Score=32.95 Aligned_cols=44 Identities=23% Similarity=0.286 Sum_probs=37.7
Q ss_pred CCcchHHHHHHhCCChhhHHHHhhcCcCHHHhcCCCHHHHhcCCCC
Q 029178 137 KAETSVDGFLRSLGLEKYSITFQAEEVDMTALLHMTDEDLKALGIP 182 (197)
Q Consensus 137 W~~~~V~~wLksLGL~kY~~~F~~eeIDgdaLl~LTeeDLKeLGI~ 182 (197)
|+...|..||+++||.+|..+ .++++-++|+...+..+.-.||+
T Consensus 107 ~~~~~vle~Lk~~gl~~~Ir~--keevnK~al~~~~~~~~~~~Gv~ 150 (171)
T 2p2u_A 107 ITKDMTLERLRQFGISEGIRI--KEDVNKEAMQGWPDERLEMVGLK 150 (171)
T ss_dssp CCHHHHHHHHHHTTCCTTCCC--CCCCCHHHHTTSCHHHHHHTTCC
T ss_pred CCHHHHHHHHHHCCcHhheee--ccccCHHHHhcCcccceeeCCeE
Confidence 567899999999999865432 48999999999999999999997
No 69
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=68.58 E-value=4.1 Score=30.53 Aligned_cols=41 Identities=15% Similarity=0.360 Sum_probs=30.6
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcC--cCHHHh----cCCCHHHHhc
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEE--VDMTAL----LHMTDEDLKA 178 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~ee--IDgdaL----l~LTeeDLKe 178 (197)
+-.+-+.||+.-|+.+|.+.|++.. ||.+.. ..|.+++|..
T Consensus 22 eA~eAC~WLRaaGFPQYAqlyed~~FPIdi~~VkkDH~FLd~d~l~s 68 (91)
T 2dky_A 22 EAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEA 68 (91)
T ss_dssp HHHHHHHHHHHHTCTTHHHHHHTTCCSCCHHHHHHHTTTSCHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHhcccccccccHHHhccCCCccCHHHHHH
Confidence 4467899999999999999999874 676543 3455665654
No 70
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=62.30 E-value=3.6 Score=30.25 Aligned_cols=31 Identities=16% Similarity=0.487 Sum_probs=25.5
Q ss_pred CcchHHHHHHhCCChhhHHHHhhcC--cCHHHh
Q 029178 138 AETSVDGFLRSLGLEKYSITFQAEE--VDMTAL 168 (197)
Q Consensus 138 ~~~~V~~wLksLGL~kY~~~F~~ee--IDgdaL 168 (197)
+-.+-+.||+..|+.+|.+.|++.. ||.+.+
T Consensus 20 eA~eAC~WLRaaGFPQYAqlyed~qFPIdi~~V 52 (81)
T 2h80_A 20 EAKEACDWLRAAGFPQYAQLYEDSQFPINIVAV 52 (81)
T ss_dssp HHHHHHHHHHHTTCHHHHHTTTTTCCCSCHHHH
T ss_pred HHHHHHHHHHHcCCcHHHHHhhcccccccHHHh
Confidence 4467899999999999999999874 676653
No 71
>2lpe_A Kinase suppressor of RAS 1; SAM domain, CC-SAM, coiled-coil, signaling protein, scaffold protein; NMR {Mus musculus}
Probab=61.75 E-value=6.1 Score=31.96 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=42.8
Q ss_pred CcchHHHHHHhCCChh-hHHHHhhcCcCHHHhcCCCHHHHhc----CCCCcchHHHHHHHHH
Q 029178 138 AETSVDGFLRSLGLEK-YSITFQAEEVDMTALLHMTDEDLKA----LGIPMGPRKKILLALE 194 (197)
Q Consensus 138 ~~~~V~~wLksLGL~k-Y~~~F~~eeIDgdaLl~LTeeDLKe----LGI~lGpRKKIL~aIq 194 (197)
..+.+..||+-.|+.. +.+.. ....++|+|+.|+|+++++ .|..-+.-.++..|++
T Consensus 82 ~yP~l~~WLrvVgl~~esiq~i-~~~~TLe~LLemsd~evr~~L~~~ga~eEEcrRL~~Al~ 142 (149)
T 2lpe_A 82 SYPRFSDWLYIFNVRPEVVQEI-PQELTLDALLEMDEAKAKEMLRRWGASTEECSRLQQALT 142 (149)
T ss_dssp GCSCSTTTHHHHTCCHHHHTTS-CTTCSHHHHTTSCHHHHHHHHHTTTCCTHHHHHHHHHHT
T ss_pred cCchHHHHHHHhccCHHHHHHh-hhhccHHHHHhcCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3457889999999975 44444 5578999999999999886 5555667778877764
No 72
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.73 E-value=14 Score=28.77 Aligned_cols=47 Identities=17% Similarity=0.140 Sum_probs=35.2
Q ss_pred CCcccCCCCcchHHHHHH----hCCChhhHHHHhhc-CcCHHHhcCCCHHHHhc
Q 029178 130 SKKKDQQKAETSVDGFLR----SLGLEKYSITFQAE-EVDMTALLHMTDEDLKA 178 (197)
Q Consensus 130 ~rk~~~~W~~~~V~~wLk----sLGL~kY~~~F~~e-eIDgdaLl~LTeeDLKe 178 (197)
-++++..|+...|..||. +.+|..- .+..- .+||.+|+.||.+|+..
T Consensus 34 IP~DP~~WS~~~V~~WL~Wa~~ef~L~~i--d~~~Fq~mnGk~LC~LskeDF~~ 85 (128)
T 2ytu_A 34 VPADPTLWTQEHVRQWLEWAIKEYSLMEI--DTSFFQNMDGKELCKMNKEDFLR 85 (128)
T ss_dssp CCSCGGGCCTTHHHHHHHHHHHHTCCCSC--CCGGGSSCCTTHHHHCCHHHHHH
T ss_pred CCcchhhCCHHHHHHHHHHHHHhcCCCCC--ChHhCCCCCHHHHHcCCHHHHHH
Confidence 356789999999999994 4455331 23333 68999999999999864
No 73
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=30.15 E-value=11 Score=31.98 Aligned_cols=34 Identities=9% Similarity=0.137 Sum_probs=0.0
Q ss_pred cchHHHHHHhCCChhhHHHHhhcCc-CHHHhcCCC
Q 029178 139 ETSVDGFLRSLGLEKYSITFQAEEV-DMTALLHMT 172 (197)
Q Consensus 139 ~~~V~~wLksLGL~kY~~~F~~eeI-DgdaLl~LT 172 (197)
..+...||....+++|.+.|.+.++ +++.+..||
T Consensus 339 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (373)
T 2qol_A 339 FRTTGDWLNGVWTAHCKEIFTGVEYSSCDTIAKIS 373 (373)
T ss_dssp -----------------------------------
T ss_pred CCCHHHHHHhccchHHHHHHHhcCCCcHHHHhccC
Confidence 4567899999999999999998765 588887765
Done!