BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029181
         (197 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
           OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
          Length = 242

 Score =  171 bits (432), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 112/151 (74%), Gaps = 10/151 (6%)

Query: 52  SDKRRNRV----SFFSGFSTK-----RVESFKEELFQAIKPLDRGAEASPEDQARVDQIA 102
            D+ R RV    SF   F T+     + +  K+EL +AI+PL+RGA ASP+DQ R+DQ+A
Sbjct: 44  GDRERLRVQAIFSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLA 103

Query: 103 RKLEAVNDIKEPLKSNLLNGKWELLYTTSQSLLQTKRPKFLRPNGKIYQAINIDTLRAQN 162
           RK+EAVN  KEPLKS+L+NGKWEL+YTTS S+LQ K+P+FLR     YQ+IN+DTL+ QN
Sbjct: 104 RKVEAVNPTKEPLKSDLVNGKWELIYTTSASILQAKKPRFLRSITN-YQSINVDTLKVQN 162

Query: 163 IETWPFFNQATANLVPLNSKRVAVKFDYFRI 193
           +ETWPF+N  T ++ PLNSK+VAVK   F+I
Sbjct: 163 METWPFYNSVTGDIKPLNSKKVAVKLQVFKI 193


>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
           OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
          Length = 234

 Score =  163 bits (412), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 109/148 (73%), Gaps = 8/148 (5%)

Query: 52  SDKRRNRV-SFFS-----GFSTKRVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKL 105
            D+ R R+ + FS     G + KR +  K EL +AI+PL+RGA ASP+DQ  +DQ+ARK+
Sbjct: 39  GDRERLRIQAVFSFPPRNGGAEKR-KQLKHELVEAIEPLERGATASPDDQLLIDQLARKV 97

Query: 106 EAVNDIKEPLKSNLLNGKWELLYTTSQSLLQTKRPKFLRPNGKIYQAINIDTLRAQNIET 165
           EAVN  KEPLKS+L+NGKWEL+YTTS ++LQ K+P+FLR +   YQ IN+DTL+ Q +ET
Sbjct: 98  EAVNPTKEPLKSDLINGKWELIYTTSAAILQAKKPRFLR-SLTNYQCINMDTLKVQRMET 156

Query: 166 WPFFNQATANLVPLNSKRVAVKFDYFRI 193
           WPF+N  T +L PLNSK VAVK   F+I
Sbjct: 157 WPFYNSVTGDLTPLNSKTVAVKLQVFKI 184


>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
           sativa subsp. japonica GN=PAP2 PE=2 SV=1
          Length = 319

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 15/135 (11%)

Query: 67  TKRVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKS-NLLNGKWE 125
           T  V   K +L +A+   +RG  AS E +A V ++  +LEA N    P ++  LLNGKW 
Sbjct: 89  TSEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWI 148

Query: 126 LLYTTSQSLL----QTKRPKFLRPNGKIYQAINIDTLRAQNIETWPFFNQATANLVPLNS 181
           L YT+   L         P+ ++   +I Q I+ +    QN     F        V  N+
Sbjct: 149 LAYTSFSQLFPLLGSGSLPQLVKVE-EISQTIDSENFTVQNC--IKFSGPLATTSVSTNA 205

Query: 182 -------KRVAVKFD 189
                  KRV +KFD
Sbjct: 206 KFEVRSPKRVQIKFD 220


>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
           OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
          Length = 318

 Score = 44.7 bits (104), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 66  STKRVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKSN-LLNGKW 124
           S +  E  K  L  ++   DRG   S + +A + ++  +LE+ N    P ++  LLNGKW
Sbjct: 87  SVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKW 146

Query: 125 ELLYTTSQSL--LQTKRPKFLRPNGKIYQAINIDTLRAQNIETW--PFFNQA---TANLV 177
            L YT+   L  L ++R + L    +I Q I+ D+   QN   +  PF   +    A   
Sbjct: 147 ILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFE 206

Query: 178 PLNSKRVAVKFDYFRIA 194
             + KRV +KF+   I 
Sbjct: 207 IRSPKRVQIKFEQGVIG 223


>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
           OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
          Length = 310

 Score = 43.5 bits (101), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 12/137 (8%)

Query: 68  KRVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKSN-LLNGKWEL 126
           +  E  K  L  ++   DRG  AS E +A +  +  +LE+ N    P ++  LLNGKW L
Sbjct: 81  EETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWIL 140

Query: 127 LYTTSQSL--LQTKRPKFLRPNGKIYQAINIDTLRAQNIETWPFFNQATANLVPLNS--- 181
            YT+  +L  L ++    L    +I Q I+ D    QN  +  F      N +  N+   
Sbjct: 141 AYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQN--SVRFAGPLGTNSISTNAKFE 198

Query: 182 ----KRVAVKFDYFRIA 194
               KRV +KF+   I 
Sbjct: 199 IRSPKRVQIKFEQGVIG 215


>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
           OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
          Length = 409

 Score = 43.1 bits (100), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)

Query: 86  RGAEASPEDQARVDQIARKLEAVNDIKEPLKSNLLNGKWELLYTTSQSLLQTKRPKFLRP 145
           RG  ASP+    V+   + LE +  I+ P  S+L+ G+W L++TT        RP    P
Sbjct: 88  RGKSASPKQLNDVESAVKVLEGLEGIQNPTDSDLIEGRWRLMFTT--------RPGTASP 139

Query: 146 NGKIYQAINIDTL 158
             + +  +++ T+
Sbjct: 140 IQRTFTGVDVFTV 152


>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
          Length = 358

 Score = 42.7 bits (99), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 68  KRVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKS-NLLNGKWEL 126
           + +E  K  L   +   + G  A  E +A V +   +LEA N    P++  +LLNG W L
Sbjct: 130 ENLEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVL 189

Query: 127 LYTTSQSLL 135
           LYT S  LL
Sbjct: 190 LYTASSELL 198


>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
           campestris GN=PAP1 PE=1 SV=1
          Length = 327

 Score = 42.0 bits (97), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)

Query: 47  LNSSVSDKRRNRVSFFSGFSTKRVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKLE 106
           LNSSV++K    V+  +  S +  E  K  L  ++   DRG  AS E +A + ++  +LE
Sbjct: 81  LNSSVAEK----VAEEAIESAEETERLKRVLAGSLYGTDRGLSASSETRAEISELITQLE 136

Query: 107 AVNDIKEPLKSN-LLNGKWELLYTTSQSL--LQTKRPKFLRPNGKIYQAINIDTLRAQN 162
           + N    P ++  LLNGKW L+YT+   L  L ++R   L    +I Q I+ D+    N
Sbjct: 137 SKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKVDEISQTIDSDSFTVHN 195


>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
           campestris GN=PAP2 PE=1 SV=1
          Length = 319

 Score = 41.6 bits (96), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 66  STKRVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKSN-LLNGKW 124
           S +  E  K  L  ++   DRG  AS E +A +  +  +LE+ N    P  +  LLNGKW
Sbjct: 88  SVEETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKW 147

Query: 125 ELLYTT 130
            L YT+
Sbjct: 148 ILAYTS 153


>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
           OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
          Length = 273

 Score = 41.6 bits (96), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 70  VESFKEELFQAIKPLDRGAEASPED-QARVDQIARKLEAVNDIKEPLKS-NLLNGKWELL 127
           V   KEEL++A+K ++RG      D +  ++ + + LE  N   EP    + + G W+L+
Sbjct: 83  VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142

Query: 128 YTTSQSLLQTKRPKF-LR---PNGKIYQAINI 155
           Y+T  ++L +KR K  LR     G + Q I+I
Sbjct: 143 YSTI-TVLGSKRTKLGLRDFVSLGDLLQQIDI 173


>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
           GN=PAP PE=2 SV=1
          Length = 323

 Score = 40.0 bits (92), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 69  RVESFKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKS-NLLNGKWELL 127
            +++ K+ L  +    DRG  A+ E +A + ++  +LEA N    P ++  LLN KW L+
Sbjct: 95  EIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 154

Query: 128 YTTSQSL 134
           YT+   L
Sbjct: 155 YTSFSGL 161


>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
           OS=Cucumis sativus GN=CHRC PE=1 SV=1
          Length = 322

 Score = 38.9 bits (89), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 73  FKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKS-NLLNGKWELLYTTS 131
            K+ L  +    DRG   S + +A + ++  +LE+ N    P ++  LLNGKW L YTT 
Sbjct: 99  LKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTF 158

Query: 132 QSL--LQTKRPKFLRPNGKIYQAINIDTLRAQN 162
             L  L ++    ++   +I Q I+ + L  QN
Sbjct: 159 AGLFPLLSRNLPLVKVE-EISQTIDSENLTVQN 190


>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
          Length = 326

 Score = 38.9 bits (89), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)

Query: 73  FKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKS-NLLNGKWELLYTTS 131
            K++L  ++   +RG  AS E +A + ++  +LE+ N    P ++  LLNGKW L YT+ 
Sbjct: 102 LKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSF 161

Query: 132 QSLLQTKRPKFLRPN------GKIYQAINIDTLRAQN 162
             L     P   R N       +I Q I+ ++   QN
Sbjct: 162 SGLF----PLLSRGNLPLVRVEEISQTIDSESFTVQN 194


>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
          Length = 326

 Score = 38.9 bits (89), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)

Query: 73  FKEELFQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKS-NLLNGKWELLYTTS 131
            K++L  ++   +RG  AS E +A + ++  +LE+ N    P ++  LLNGKW L YT+ 
Sbjct: 102 LKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSF 161

Query: 132 QSLLQTKRPKFLRPN------GKIYQAINIDTLRAQN 162
             L     P   R N       +I Q I+ ++   QN
Sbjct: 162 SGLF----PLLSRGNLPLVRVEEISQTIDSESFTVQN 194


>sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic
           OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
          Length = 239

 Score = 38.9 bits (89), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 10/114 (8%)

Query: 85  DRGAEASPEDQARVDQIARKLEAVNDIKEPLKSNLLNGKWELLY----TTSQSLLQTKRP 140
           D G   SPE    V Q+A +L+    +KEP+K+ L+ G WE++Y    T+     ++   
Sbjct: 80  DGGVTLSPEQHKEVAQVAGELQKYC-VKEPVKNPLIFGDWEVVYCSRPTSPGGGYRSVIG 138

Query: 141 KFLRPNGKIYQAINI-DTLRAQ-NIETWPFFN---QATANLVPLNSKRVAVKFD 189
           +      ++ QAI+  D +R + +I  + F +     T  L  L+S+ V V F+
Sbjct: 139 RLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLKALDSEWVQVIFE 192


>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
           OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
          Length = 376

 Score = 38.5 bits (88), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 11/157 (7%)

Query: 41  PRNQKPLNSSVSDKRRNRVSFFSGFSTKRVESFKEELFQAIKPLDRGAEASPEDQARVDQ 100
           PRN+      +  +        S  S    E  K  L  ++   + G +A  E +A V +
Sbjct: 122 PRNEDEWGGEIGGETEADAGNGSAVSDPTWE-LKRCLADSVYGTELGFKAGSEVRAEVLE 180

Query: 101 IARKLEAVNDIKEPLKS-NLLNGKWELLYTTSQS---LLQTKRPKFLRPNGKIYQAINID 156
           +  +LEA+N    PL++  LL+G W LLYT       LL       L+    I Q+I+ +
Sbjct: 181 LVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVK-SISQSIDTN 239

Query: 157 TLRAQNIETW--PFFN---QATANLVPLNSKRVAVKF 188
            L   N  T   PF +    ATA+    +  R+ V F
Sbjct: 240 NLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSF 276


>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
           OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
          Length = 284

 Score = 37.4 bits (85), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 20/111 (18%)

Query: 84  LDRGAEASPEDQARVDQIARKLEAVN---DIKEPLKSNLLNGKWELLYTT--SQSLLQTK 138
           L+RG  AS +D  R +  A++LE      D+ + L  + L GKW LLY++  S   L   
Sbjct: 98  LNRGLVASVDDLERAEVAAKELETAGGPVDLTDDL--DKLQGKWRLLYSSAFSSRSLGGS 155

Query: 139 RPKF----LRPN--GKIYQAINIDTLRAQNI------ETWPFFN-QATANL 176
           RP      L P   G+++Q I++ +    NI        WPF   +ATA L
Sbjct: 156 RPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATL 206


>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
           sativa subsp. japonica GN=PAP3 PE=3 SV=1
          Length = 374

 Score = 37.4 bits (85), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 85  DRGAEASPEDQARVDQIARKLEAVNDIKEPLK-SNLLNGKWELLYTTSQSLL 135
           D G  AS E +  V ++  +LEA N   EP++ ++LL G W L+YT    LL
Sbjct: 161 DLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELL 212


>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
           campestris GN=PAP3 PE=2 SV=1
          Length = 360

 Score = 36.2 bits (82), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 87  GAEASPEDQARVDQIARKLEAVNDIKEPLKS-NLLNGKWELLYTTSQSLL 135
           G  A  E +A V +I  +LEA+N  + P+++  LL+G W LLYT    LL
Sbjct: 151 GFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELL 200


>sp|Q06625|GDE_YEAST Glycogen debranching enzyme OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=GDB1 PE=1 SV=1
          Length = 1536

 Score = 35.0 bits (79), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 101 IARKLEAVNDIKEPLKSNLLNGKWELLYTTSQ 132
           + RK+   ND+  PL +NL NG W L YT S+
Sbjct: 943 VLRKIVFYNDLAHPLSANLRNGHWALDYTISR 974


>sp|B9L101|OBG_THERP GTPase obg OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159
           / P-2) GN=obg PE=3 SV=1
          Length = 467

 Score = 32.0 bits (71), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 92  PEDQARVDQIARKLEAVNDIKEPLKSNLLNGKWELLYTTSQSLLQTKRPKFLRPNGKIYQ 151
           PE QA   +IAR L+ +     P+ +    G  EL+  T + L Q  RP+ + P  + ++
Sbjct: 290 PEAQANWPRIARALDELGYTAYPISAATGQGVGELIRATWERLQQLPRPERVAPPLRSHR 349

Query: 152 AINIDTLRAQNIETW 166
              +D  R+Q  E W
Sbjct: 350 VYTLD--RSQ--ERW 360


>sp|A1RRX6|PYRH_PYRIL Uridylate kinase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM
           9189) GN=pyrH PE=3 SV=1
          Length = 217

 Score = 32.0 bits (71), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 22  LNLFYSKPNIIIRTHLL--FCPRNQKPLNSSVSDKRRNRVSFFSGF----STKRVESFKE 75
           L ++ S+ N ++   LL   CP     +   +   RR R++   GF    ST  V +   
Sbjct: 62  LGIYASRLNALLFISLLEDACPIVPTNIEEFLDAWRRCRITVTGGFQPGQSTATVAALVA 121

Query: 76  ELFQAIKPLDRG-AEASPEDQARVDQIARKLEAV--NDIKEPLKSNLLNGKWELLYTTSQ 132
           E  +A   L+    +A   +  +++  A++L  +  ++ +  LKS++L G +EL+ T S 
Sbjct: 122 EAVKAPVLLNAANIDAVYSEDPKINPNAKRLPVLTYDEFERILKSSVLPGGYELMDTWSI 181

Query: 133 SLLQ 136
           S+L+
Sbjct: 182 SILK 185


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.132    0.379 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,685,695
Number of Sequences: 539616
Number of extensions: 2424951
Number of successful extensions: 6899
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 6885
Number of HSP's gapped (non-prelim): 29
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)