BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029184
         (197 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P0C261|YM057_YEAST Putative uncharacterized membrane protein YML057C-A
           OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=YML057C-A PE=5 SV=1
          Length = 129

 Score = 34.7 bits (78), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 1   MGVLGEGKGSTLVHILVVILSLVAFGFSIAAER----RRSTGHMMPVPDQSNATYCVYSS 56
           +GV+ +   S L  I ++I + +   F IA+E     RRSTG  + + +  N ++C+Y S
Sbjct: 46  IGVVDDCGRSVLFSI-ILIAAFICSVFLIASEDIAGSRRSTGSCVTLWEGRNISFCLYRS 104

Query: 57  DVATGYGVGAFLFLLSSESL 76
           +      VG   FL  + SL
Sbjct: 105 NWLNTVPVGYMFFLRKNRSL 124


>sp|Q8BLV3|SL9A7_MOUSE Sodium/hydrogen exchanger 7 OS=Mus musculus GN=Slc9a7 PE=2 SV=1
          Length = 726

 Score = 32.0 bits (71), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 8/46 (17%)

Query: 75  SLLMGVTKCMCFGRPLAPGGNRAWTIIYFMSSWAAFLVAEACLIAG 120
           +L+   TK  CF  PL        T ++F+ SW+ FL+AEAC   G
Sbjct: 346 ALVTKFTKLHCF--PLLE------TALFFLMSWSTFLLAEACGFTG 383


>sp|Q96T83|SL9A7_HUMAN Sodium/hydrogen exchanger 7 OS=Homo sapiens GN=SLC9A7 PE=1 SV=1
          Length = 725

 Score = 31.2 bits (69), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 8/40 (20%)

Query: 81  TKCMCFGRPLAPGGNRAWTIIYFMSSWAAFLVAEACLIAG 120
           TK  CF  PL        T ++F+ SW+ FL+AEAC   G
Sbjct: 351 TKLHCF--PLLE------TALFFLMSWSTFLLAEACGFTG 382


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.134    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,692,904
Number of Sequences: 539616
Number of extensions: 2305219
Number of successful extensions: 6126
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6118
Number of HSP's gapped (non-prelim): 9
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)