BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029186
         (197 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
           radiata GN=ARG7 PE=2 SV=1
          Length = 92

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 72  APEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYEN-QGPIMLPCDVDLF 128
           AP+G  +VYVG   +RFVI     N PLF+ LL  AE E+GY++  G + +PC  DLF
Sbjct: 25  APKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82


>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 72  APEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYEN-QGPIMLPCDVDLF 128
           AP+G  +VYVG + +RFVI   + N P F+ LL  AE E+GY++  G + +PC  D+F
Sbjct: 17  APKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVF 74


>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
          Length = 92

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 62  NNYNNKGCQVAPEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYEN-QGPIM 120
           N  ++K  +V P+G   VYVG + +RF+I   + N P F+ LL  AE E+GY++  G + 
Sbjct: 16  NQASSKSVEV-PKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLT 74

Query: 121 LPCDVDLFFKVLAEL 135
           +PC  D F  V + L
Sbjct: 75  IPCKEDEFLTVTSHL 89


>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 72  APEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYEN-QGPIMLPCDVDLFFK 130
           AP+G  +VYVG + +RFVI   + N P F+ LL  AE E+GY++  G + +PC  ++F +
Sbjct: 17  APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQR 76

Query: 131 V 131
           +
Sbjct: 77  I 77


>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
          Length = 93

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 72  APEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYEN-QGPIMLPCDVDLFFK 130
            P+G  +VYVG + +RF I   + N P F+ LL  AE E+GY++  G + +PC  + F  
Sbjct: 26  VPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLN 85

Query: 131 VLAEL 135
           V A L
Sbjct: 86  VTAHL 90


>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
          Length = 90

 Score = 52.0 bits (123), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 7/81 (8%)

Query: 49  IKSKSWSSSPERNNNYNNKGCQVAPEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAE 108
           I+  S+S+     N  ++K   V  +G  +VYVG + +RFVI   + N P F+ LL  AE
Sbjct: 8   IRKASFSA-----NQASSKAVDVE-KGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAE 61

Query: 109 SEYGYEN-QGPIMLPCDVDLF 128
            E+GY +  G + +PC  D+F
Sbjct: 62  EEFGYHHPNGGLTIPCSEDVF 82


>sp|A6W6E9|ISPF_KINRD 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
           OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM
           14245 / SRS30216) GN=ispF PE=3 SV=1
          Length = 159

 Score = 32.0 bits (71), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 131 VLAELESTGDED-DDHDIANKGCCSPLVLCSSPARRPNHRISSKDYGAGAGGAYRLLSPS 189
           +L E E+ G E   D D+A   CC  L   +       H  +++   AGA GA  L   +
Sbjct: 27  LLWEGEAAGPEGHSDGDVAAHACCDALFAAAGLGDLGAHFGTARPEFAGASGARLLAEAA 86

Query: 190 RLLKMNGF 197
           RL++  GF
Sbjct: 87  RLVREAGF 94


>sp|P50734|MECA2_BACSU Adapter protein MecA 2 OS=Bacillus subtilis (strain 168) GN=mecB
           PE=1 SV=1
          Length = 194

 Score = 30.8 bits (68), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 91  KTEFANHPLFKILLEDAESEYGYENQGPIMLPC 123
           K  F  H LFK ++ +A +E G+E  GPI +  
Sbjct: 32  KDSFKVHQLFKDMMNEANTELGFEANGPIAVEV 64


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.132    0.404 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,873,625
Number of Sequences: 539616
Number of extensions: 3549114
Number of successful extensions: 13638
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 12728
Number of HSP's gapped (non-prelim): 600
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)