BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029190
(197 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224073782|ref|XP_002304170.1| predicted protein [Populus trichocarpa]
gi|222841602|gb|EEE79149.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 166/203 (81%), Gaps = 7/203 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQS+IDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTG-SAPLVPGMRPPVLPRPGPSPPGYVS 119
TAAFQQVGAAYNQHL+ QRPRLPVLPTPVMP+ G +APL PGMRPPVLPRP P PGY++
Sbjct: 61 TAAFQQVGAAYNQHLMVQRPRLPVLPTPVMPIGGNNAPLFPGMRPPVLPRPMPGAPGYMN 120
Query: 120 APGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATPQTYQAN 179
P MPPMMAPPGAPS PGQ+NG PRPP ++ V GS A P + SG PSM P TYQAN
Sbjct: 121 PPMMPPMMAPPGAPSLPGQMNGIPRPPTMIAQPNVPGSTAAP-TPSGPPSMGPPVTYQAN 179
Query: 180 PTVPTSG-----NLNAQAPEMNH 197
TSG N+NA APE NH
Sbjct: 180 QAATTSGGFDSFNVNAAAPEANH 202
>gi|225436815|ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
Length = 213
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 159/214 (74%), Positives = 167/214 (78%), Gaps = 18/214 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTGSA------PLVPGMRPPVLPR 109
TAAFQQVGAAYNQHL++ RPRLPVLPTP MP+ GSA PLVPGMRPPVLPR
Sbjct: 61 TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR 120
Query: 110 PGPSPPGYVSAPGMPPMMAPPGAPSAPG-QLNGFPRPPAVMNPTAVSGSAAPPASSSGAP 168
P P PGY+ APGMP MMAPPGAPS P LN PRPP + P AV GS + P +S GAP
Sbjct: 121 PVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTP-TSGGAP 179
Query: 169 SMATPQTYQANPTVPTSG-----NLNAQAPEMNH 197
SM T YQANP PTSG N+NAQ PE NH
Sbjct: 180 SMMTQPMYQANPAGPTSGGFDSFNINAQGPEANH 213
>gi|255559356|ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
gi|223540083|gb|EEF41660.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
Length = 206
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 149/197 (75%), Positives = 162/197 (82%), Gaps = 9/197 (4%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSA------PLVPGM-RPPVLPRPGPS 113
AAFQQVGAAYNQHLL QRPRLPVLPTP+MP+ GSA PL+PG+ PPVLPRP P+
Sbjct: 61 AAAFQQVGAAYNQHLL-QRPRLPVLPTPMMPIPGSAQLPANTPLMPGIRPPPVLPRPVPA 119
Query: 114 PPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATP 173
PGY+S+P MPPM+APPGAPS PGQ+NG PRPP + P V GSAA A SGAPSM P
Sbjct: 120 APGYMSSPAMPPMVAPPGAPSLPGQVNGLPRPPMSIPPATVPGSAA-VAPPSGAPSMVPP 178
Query: 174 QTYQANPTVPTSGNLNA 190
+YQ NP PTS ++
Sbjct: 179 ASYQTNPAPPTSAGFDS 195
>gi|449462314|ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus]
gi|449491514|ref|XP_004158922.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus]
Length = 197
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 148/191 (77%), Gaps = 8/191 (4%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAP-LVPGMRPPVLPRPGPSPPGYVS 119
AAFQQVGAA+NQHLL QRPRLPVLPTPVMP G+AP L+PG+RPPVLPRP P PGY+
Sbjct: 61 AAAFQQVGAAFNQHLLGQRPRLPVLPTPVMP--GAAPGLMPGIRPPVLPRPIPGAPGYLP 118
Query: 120 APGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATPQTYQAN 179
P P M P PGQ+N P P + GSA P+S++GAP +A P TYQAN
Sbjct: 119 TP-TMPPMMAPPGAPIPGQVN---IPSRPPPPAPLPGSAPQPSSTNGAP-LAAPSTYQAN 173
Query: 180 PTVPTSGNLNA 190
P P SG ++
Sbjct: 174 PAAPGSGGYDS 184
>gi|356535539|ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
Length = 206
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 154/209 (73%), Gaps = 15/209 (7%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMT-------GSAPLVPGMRPPVLPRPGPS 113
AAFQQVG AYN HL+ QRP LP + P G PL+ GMRPPV PRP P
Sbjct: 61 AAAFQQVGVAYN-HLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRP-PG 118
Query: 114 PPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATP 173
PGYVSA MPPM+ PPGAP PGQLN PRPP++ P V GS A PA S+GAPSM +
Sbjct: 119 APGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPA-SNGAPSMVSS 177
Query: 174 QTYQANPTVPTSG-----NLNAQAPEMNH 197
YQANP P+SG N +AQAPE NH
Sbjct: 178 AMYQANPPAPSSGSYDNYNTSAQAPEGNH 206
>gi|388496966|gb|AFK36549.1| unknown [Lotus japonicus]
Length = 192
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 141/213 (66%), Gaps = 37/213 (17%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLA-----------QRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPR 109
AAFQQVG AYN HL+ +PR P+ MP G PL+PGMR P++P
Sbjct: 61 AAAFQQVGVAYN-HLMVPRPGGPPLLPMPQPRFPMPGNVQMP--GGQPLMPGMR-PLMPL 116
Query: 110 PGPSPPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPS 169
P P PGAP PGQLN PRPP+ PT GS A PA S+GAPS
Sbjct: 117 PRPV----------------PGAPHVPGQLNAIPRPPSFAPPTTAPGSTAAPA-SNGAPS 159
Query: 170 MATPQTYQANPTVPTSG-----NLNAQAPEMNH 197
M + YQ NP+ P+SG N NAQAP+ NH
Sbjct: 160 MVSSAMYQPNPSAPSSGGYDNYNANAQAPDGNH 192
>gi|294460061|gb|ADE75613.1| unknown [Picea sitchensis]
Length = 244
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 131/180 (72%), Gaps = 16/180 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQ 60
Query: 61 TAAF-QQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTGSAPL------VPGMRPPVLP 108
TAAF QQVGAA+ QHL + QRPR+P+LP P +P+ GS L +P +RPP+L
Sbjct: 61 TAAFQQQVGAAFQQHLASMQAGQQRPRIPMLPPPTLPVPGSTQLPNGLSMLPTLRPPILT 120
Query: 109 RPGPSPPGYVSAPGMPPMMAPPGA----PSAPGQLNGFPRPPAVMNPTAVSGSAAPPASS 164
RP PPGY + G PM+ PPGA P Q NG+PRPP + P + +A+ SS
Sbjct: 121 RPTLIPPGYGVSVGTSPMIRPPGAAVTSPPGVAQSNGWPRPPTLTPPVSTGVTASTATSS 180
>gi|356502842|ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 159/209 (76%), Gaps = 15/209 (7%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMT-------GSAPLVPGMRPPVLPRPGPS 113
AAFQQVG AYN HL+ QRP LP + P GS PL+PGMRPPV PRP P
Sbjct: 61 AAAFQQVGVAYN-HLMVQRPNLPPVLPPPRLPIPGNAQIPGSQPLMPGMRPPVFPRP-PG 118
Query: 114 PPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATP 173
PGYVSAP MPPM+ PPGAP APGQLN PRPP++ P AV GS A PA S+GAPSM +
Sbjct: 119 APGYVSAPTMPPMLPPPGAPQAPGQLNTIPRPPSLAPPPAVPGSTAAPA-SNGAPSMVSS 177
Query: 174 QTYQANPTVPTSG-----NLNAQAPEMNH 197
YQANP P+SG N +AQAPE NH
Sbjct: 178 AMYQANPPAPSSGSYDNYNASAQAPEGNH 206
>gi|346467509|gb|AEO33599.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/151 (71%), Positives = 118/151 (78%), Gaps = 12/151 (7%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 63 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 122
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTGSAP------LVPGMRPPVLPR 109
AAF QVGA +NQHL++ QRPRLP+L P+ PM G++P L+PGMRPPVLP
Sbjct: 123 AAAFHQVGATFNQHLMSLQGNPQRPRLPILAPPIFPM-GASPQGPIPSLLPGMRPPVLPV 181
Query: 110 PGPSPPGYVSAPGMPPMMAPPGAPSAPGQLN 140
P PGY + P PP M PP A S P Q+N
Sbjct: 182 PMAGVPGYGAPPNAPPSMLPPVATSMPMQMN 212
>gi|296086639|emb|CBI32274.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/160 (80%), Positives = 134/160 (83%), Gaps = 12/160 (7%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTGSA------PLVPGMRPPVLPR 109
TAAFQQVGAAYNQHL++ RPRLPVLPTP MP+ GSA PLVPGMRPPVLPR
Sbjct: 61 TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR 120
Query: 110 PGPSPPGYVSAPGMPPMMAPPGAPSAPG-QLNGFPRPPAV 148
P P PGY+ APGMP MMAPPGAPS P LN PRPP +
Sbjct: 121 PVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTM 160
>gi|115445447|ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group]
gi|50251962|dbj|BAD27897.1| putative u1 small nuclear ribonucleoprotein C [Oryza sativa
Japonica Group]
gi|113536034|dbj|BAF08417.1| Os02g0266100 [Oryza sativa Japonica Group]
gi|125581580|gb|EAZ22511.1| hypothetical protein OsJ_06175 [Oryza sativa Japonica Group]
gi|215686377|dbj|BAG87638.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707035|dbj|BAG93495.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 139/211 (65%), Gaps = 36/211 (17%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPM----TGSAPLVPGMRPPVLPRPG 111
AAF QVGA +NQHLL+ RPRLP+LPTP MP+ APL+PG+RPP+LP PG
Sbjct: 61 AAAF-QVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRPPILPAPG 119
Query: 112 -PSPPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVM------------NPTAVSGSA 158
P PG + P MP APPG+ PG + PP M P SG+
Sbjct: 120 IPGYPGAPNVPTMPQTGAPPGS-MPPGSM-----PPGSMPMQMAPLPRPPTLPPPTSGAP 173
Query: 159 APPASSSGAPSMATPQTYQAN---PTVPTSG 186
P +SGAP P YQ N P PTSG
Sbjct: 174 GAPIPNSGAP----PAMYQTNPPQPAGPTSG 200
>gi|125538898|gb|EAY85293.1| hypothetical protein OsI_06664 [Oryza sativa Indica Group]
Length = 238
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 138/221 (62%), Gaps = 46/221 (20%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQ-----RPRLPVLPTPVMPM----TGSAPLVPGMRPPVLPRPG 111
AAF QVGA +NQHLL+ RPRLP+LPTP MP+ APL+PG+RPP+LP PG
Sbjct: 61 AAAF-QVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRPPILPAPG 119
Query: 112 -----------PSPPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVM----------- 149
PG + P MP APPG+ PG + PP M
Sbjct: 120 IPGQIQKQQCVKGYPGAPNVPTMPQTGAPPGS-MPPGSM-----PPGSMPMQMAPLPRPP 173
Query: 150 -NPTAVSGSAAPPASSSGAPSMATPQTYQAN---PTVPTSG 186
P SG+ P +SGAP P YQ N P PTSG
Sbjct: 174 TLPPPTSGAPGAPIPNSGAP----PAMYQTNPPQPAGPTSG 210
>gi|326491215|dbj|BAK05707.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 124/175 (70%), Gaps = 15/175 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLL-----AQRPRLPVLPTPVMPM---TGSAPLVPGMRPPVLPRPGP 112
AAF QVGA +NQHLL RPRLP+LPTP+M P P RPP+LP PG
Sbjct: 61 AAAF-QVGAPFNQHLLQYPGNMSRPRLPILPTPMMQHGYPQHQQPGGPFARPPILPVPG- 118
Query: 113 SPPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGA 167
PGY AP MP APPG S P Q+ PRP + PT SG+ P S++ +
Sbjct: 119 -APGYPGAPTMPLPGAPPG--SMPMQVAPLPRPQTLPPPT--SGAPGAPMSNNAS 168
>gi|18412147|ref|NP_567250.1| C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]
gi|75217907|sp|Q56XE4.1|RU1C_ARATH RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|62320807|dbj|BAD93742.1| putative C-type U1 snRNP [Arabidopsis thaliana]
gi|332656876|gb|AEE82276.1| C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]
Length = 207
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 113/148 (76%), Gaps = 8/148 (5%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSA 120
T +QQVGA +NQH+LA+ +LP MPM GMRPPVLPRP P GY+
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPM--------GMRPPVLPRPMMPPQGYMPP 112
Query: 121 PGMPPMMAPPGAPSAPGQLNGFPRPPAV 148
PG+P MMAPPGAP P NG RPP +
Sbjct: 113 PGVPQMMAPPGAPLPPPPQNGILRPPGM 140
>gi|350538849|ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
gi|62751087|dbj|BAD95791.1| similar to u1 small nuclear ribonucleoprotein C [Solanum
lycopersicum]
Length = 197
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 131/211 (62%), Gaps = 28/211 (13%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHK NVR+YYQQFE Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLG- 59
Query: 61 TAAFQQVGAAYNQ---------HLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPG 111
AF+ VG + Q Q P P +P A VPGMRPPVLPRP
Sbjct: 60 --AFRPVGLPFPQLRPGLPGLPTPPMQMPGNPQMPA-------GAQWVPGMRPPVLPRPM 110
Query: 112 PSPPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMA 171
P PGY P MP M+APPGAP PGQ+N RP P+AV GS PA + G P A
Sbjct: 111 PGLPGYAPPP-MPQMLAPPGAP-MPGQVNNMQRPAGP--PSAVPGSMGMPAPTGGPPMFA 166
Query: 172 TPQTYQANPTVPTSGNL-----NAQAPEMNH 197
P YQ + TVPT+G + NAQA + N
Sbjct: 167 PPPVYQGSTTVPTTGGVDNSSTNAQAADSNQ 197
>gi|357141531|ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822246 [Brachypodium
distachyon]
Length = 211
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 107/138 (77%), Gaps = 9/138 (6%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSL+DQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLLDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLL-----AQRPRLPVLPTPVMPMTG-SAPLVPGMRPPVLPRPGPSP 114
AAF QVGA +NQH+L RPRLP+LPTP+MP P P RPP+LP PG
Sbjct: 61 AAAF-QVGAPFNQHMLQFPGNVPRPRLPILPTPMMPHGFPQQPGGPFARPPILPVPG--A 117
Query: 115 PGYVSAPGMPPMMAPPGA 132
PGY AP MP PPG+
Sbjct: 118 PGYPGAPTMPQPGGPPGS 135
>gi|28466929|gb|AAO44073.1| At4g03120 [Arabidopsis thaliana]
gi|110743941|dbj|BAE99804.1| putative C-type U1 snRNP [Arabidopsis thaliana]
Length = 207
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/148 (70%), Positives = 113/148 (76%), Gaps = 8/148 (5%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR Y+QQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYHQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSA 120
T +QQVGA +NQH+LA+ +LP MPM GMRPPVLPRP P GY+
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPM--------GMRPPVLPRPMMPPQGYMPP 112
Query: 121 PGMPPMMAPPGAPSAPGQLNGFPRPPAV 148
PG+P MMAPPGAP P NG RPP +
Sbjct: 113 PGVPQMMAPPGAPLPPPPQNGILRPPGM 140
>gi|242062554|ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor]
gi|363805509|sp|C5XYW4.1|RU1C2_SORBI RecName: Full=U1 small nuclear ribonucleoprotein C-2; Short=U1
snRNP C-2; Short=U1-C-2; Short=U1C-2
gi|241932397|gb|EES05542.1| hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor]
Length = 228
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 136/213 (63%), Gaps = 35/213 (16%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHL-G 59
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTG-SAPLVPGMRPPVLPRPGPSP 114
AA Q GA +NQH+LA RPRLP+LPTP MP APL+PG+RPP+LP PG
Sbjct: 60 QAAAFQAGAPFNQHMLAFPGAVARPRLPILPTPGMPHGFPQAPLMPGVRPPILPAPG--V 117
Query: 115 PGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVM-NPTAVSGS-----------AAPPA 162
PGY PG PP M PGAP PG + PP M P A GS P
Sbjct: 118 PGY---PGAPPTMPQPGAP--PGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPP 172
Query: 163 SSSGAP------SMATPQTYQANPTV---PTSG 186
+SG P S A P YQANP PTSG
Sbjct: 173 PTSGVPGAPIPNSAAPPAIYQANPPAPAGPTSG 205
>gi|413925918|gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]
Length = 421
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 134/211 (63%), Gaps = 31/211 (14%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL
Sbjct: 194 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHL-G 252
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVM----PMTGSAPLVPGMRPPVLP--- 108
AA Q GA +NQHLLA RPRLP+LPTP M P APL+PG+RPP+LP
Sbjct: 253 QAAAFQAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGIRPPILPAPG 312
Query: 109 ---------RPGPSPPGYVSAPGMPPMMAP-PGAPSAPGQLNGFPRPPAVMNPTAVSGSA 158
+PG +PPG + PG PP P PGAP + P P P SG
Sbjct: 313 YPGPPPTMQQPG-APPGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPPTSGVP 371
Query: 159 APPASSSGAPSMATPQTYQANPTV---PTSG 186
P +SGAP P YQANP PTSG
Sbjct: 372 GAPIPNSGAP----PAIYQANPQASAGPTSG 398
>gi|297813993|ref|XP_002874880.1| hypothetical protein ARALYDRAFT_911890 [Arabidopsis lyrata subsp.
lyrata]
gi|297320717|gb|EFH51139.1| hypothetical protein ARALYDRAFT_911890 [Arabidopsis lyrata subsp.
lyrata]
Length = 194
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 118/188 (62%), Gaps = 13/188 (6%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIK+HL Q
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKQHLDQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSA 120
T + QVGA +NQH+LA+ +LP MPM GMRPPVLPRP GY+
Sbjct: 61 TGGYPQVGAVFNQHMLARPRPPMMLPPGGMPM--------GMRPPVLPRPMMPGQGYMPP 112
Query: 121 PGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATPQTYQANP 180
G+P MMAPPGAP P NG RPP + + P Y NP
Sbjct: 113 QGVPQMMAPPGAPLPPPPQNGILRPPGM-----APIPGQGGGPPPNYNGLPPPPPYHTNP 167
Query: 181 TVPTSGNL 188
P SG+
Sbjct: 168 AAPPSGSF 175
>gi|4262140|gb|AAD14440.1| putative C-type U1 snRNP [Arabidopsis thaliana]
gi|7270182|emb|CAB77797.1| putative C-type U1 snRNP [Arabidopsis thaliana]
Length = 112
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 92/116 (79%), Gaps = 8/116 (6%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPG 116
T +QQVGA +NQH+LA+ +LP MPM GMRPPVLPRP P G
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPM--------GMRPPVLPRPMMPPQG 108
>gi|212722338|ref|NP_001131283.1| uncharacterized protein LOC100192596 [Zea mays]
gi|194691078|gb|ACF79623.1| unknown [Zea mays]
gi|195658989|gb|ACG48962.1| WW domain-binding protein 11 [Zea mays]
Length = 228
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 134/211 (63%), Gaps = 31/211 (14%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHL-G 59
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVM----PMTGSAPLVPGMRPPVLP--- 108
AA Q GA +NQHLLA RPRLP+LPTP M P APL+PG+RPP+LP
Sbjct: 60 QAAAFQAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGIRPPILPAPG 119
Query: 109 ---------RPGPSPPGYVSAPGMPPMMAP-PGAPSAPGQLNGFPRPPAVMNPTAVSGSA 158
+PG +PPG + PG PP P PGAP + P P P SG
Sbjct: 120 YPGPPPTMQQPG-APPGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPPTSGVP 178
Query: 159 APPASSSGAPSMATPQTYQANPTV---PTSG 186
P +SGAP P YQANP PTSG
Sbjct: 179 GAPIPNSGAP----PAIYQANPQASAGPTSG 205
>gi|413925919|gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 322
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/120 (75%), Positives = 97/120 (80%), Gaps = 10/120 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL
Sbjct: 194 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHL-G 252
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTG----SAPLVPGMRPPVLPRPG 111
AA Q GA +NQHLLA RPRLP+LPTP MP APL+PG+RPP+LP PG
Sbjct: 253 QAAAFQAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGIRPPILPAPG 312
>gi|223942415|gb|ACN25291.1| unknown [Zea mays]
Length = 129
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/120 (76%), Positives = 97/120 (80%), Gaps = 10/120 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTG----SAPLVPGMRPPVLPRPG 111
AAFQ NQHLLA RPRLP+LPTP MP APL+PG+RPP+LP PG
Sbjct: 61 AAAFQAGAPF-NQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGIRPPILPAPG 119
>gi|242064726|ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor]
gi|363805507|sp|C5XZK6.1|RU1C1_SORBI RecName: Full=U1 small nuclear ribonucleoprotein C-1; Short=U1
snRNP C-1; Short=U1-C-1; Short=U1C-1
gi|241933483|gb|EES06628.1| hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor]
Length = 231
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 131/214 (61%), Gaps = 34/214 (15%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHL-G 59
Query: 61 TAAFQQVGAAYNQHLL-----AQRPRLPVLPTPVM----PMTGSAPLVPGMRPPVLP--- 108
AA Q GA +NQH+L RPRLP+LPTP M P APL+PG+RPP+LP
Sbjct: 60 QAAAFQAGAPFNQHMLTFPGAVARPRLPILPTPGMPHGFPQAPGAPLMPGVRPPILPAPG 119
Query: 109 ------------RPGPSPPGYVSAPGMPPMMAP-PGAPSAPGQLNGFPRPPAVMNPTAVS 155
+PG +PPG + PG PP P PGAP + P P P S
Sbjct: 120 IPGYPGGPPTMLQPG-APPGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPPTS 178
Query: 156 GSAAPPASSSGAPSMATPQTYQANPTV---PTSG 186
G P +S AP P YQ NP PTSG
Sbjct: 179 GVPGAPIPNSAAP----PAIYQTNPPAPAGPTSG 208
>gi|413925917|gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 345
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 95/121 (78%), Gaps = 10/121 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL
Sbjct: 194 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHL-G 252
Query: 61 TAAFQQVGAAYNQHLLA-----QRPRLPVLPTPVMPMTG----SAPLVPGMRPPVLPRPG 111
AA Q GA +NQHLLA RPRLP+LPTP MP APL+PG+RPP + +
Sbjct: 253 QAAAFQAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGIRPPAIYQAN 312
Query: 112 P 112
P
Sbjct: 313 P 313
>gi|302793885|ref|XP_002978707.1| hypothetical protein SELMODRAFT_418544 [Selaginella moellendorffii]
gi|300153516|gb|EFJ20154.1| hypothetical protein SELMODRAFT_418544 [Selaginella moellendorffii]
Length = 675
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 79/106 (74%), Gaps = 14/106 (13%)
Query: 4 YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAA 63
YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQS+IDQ++KEH AA
Sbjct: 440 YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSIIDQKVKEHQ-HMAA 498
Query: 64 FQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGS--APLVPGMRPPVL 107
FQ + Q +PVL P M + GS AP++ MRPPV+
Sbjct: 499 FQ----GFKQM-------VPVLSRPGMGLPGSSPAPMIQPMRPPVM 533
>gi|384245040|gb|EIE18536.1| zf-U1-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 127
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
M RYYCDYCDTYLTHDSP VRKQHN GYKHKANVR+YY QFEE QTQSLID +I E +
Sbjct: 1 MTRYYCDYCDTYLTHDSPVVRKQHNDGYKHKANVRNYYMQFEESQTQSLIDSKIMEFEAK 60
Query: 61 TA-AFQ-QVGAAYNQHLLAQ 78
T AFQ QV A++ ++ +
Sbjct: 61 TRNAFQAQVAASFQAQMMGR 80
>gi|303273278|ref|XP_003056000.1| U1 small nuclear ribonucleoprotein C protein [Micromonas pusilla
CCMP1545]
gi|226462084|gb|EEH59376.1| U1 small nuclear ribonucleoprotein C protein [Micromonas pusilla
CCMP1545]
Length = 90
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRI 54
+PRYYCDYCD YLTHDSPSVRKQHNAGYKHKANVR+YY QFEEQ T S ID+++
Sbjct: 6 VPRYYCDYCDAYLTHDSPSVRKQHNAGYKHKANVRNYYMQFEEQTTLSFIDKKL 59
>gi|168040659|ref|XP_001772811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675888|gb|EDQ62378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 309
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 77/114 (67%), Gaps = 14/114 (12%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLG- 59
MPRYYCDYCDT+LTHDSPSVRKQH AGYKHKANVR YYQQFEEQQTQSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTHLTHDSPSVRKQHCAGYKHKANVRQYYQQFEEQQTQSLIDQKVKEHLGQ 60
Query: 60 --QTAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSA----PLVPGMRPPVL 107
A QQVG A H L L PM P++ +RPPVL
Sbjct: 61 TAAALAQQQVGGAVYSH-------LATLGGGYKPMAAPGLLRPPVLAAVRPPVL 107
>gi|339236925|ref|XP_003380017.1| U1 small nuclear ribonucleoprotein C [Trichinella spiralis]
gi|316977239|gb|EFV60367.1| U1 small nuclear ribonucleoprotein C [Trichinella spiralis]
Length = 426
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 35/143 (24%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+Y+CDYCDT+LTHDSPSVRK HN+G KHK NVR YYQQ+ E Q Q L+D K
Sbjct: 1 MPKYFCDYCDTHLTHDSPSVRKTHNSGRKHKENVRMYYQQWMEDQAQKLVDATAK----- 55
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSA 120
AF++ ++P + P+V MRPP++P PG PG S
Sbjct: 56 --AFKE-------------GKIP-----------ANPIVGMMRPPMIP-PGAMVPG--SV 86
Query: 121 PGMPPMMAPPGAPSAPGQLNGFP 143
PGM P+ PP + PG G P
Sbjct: 87 PGM-PVGIPPQGMNLPGMTPGVP 108
>gi|440804342|gb|ELR25219.1| U1 zinc finger protein [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCD +LTHDSPSVRK HN G+KHKA VR+YY QFE+ TQSLI Q+IKE+
Sbjct: 1 MPKYYCDYCDVFLTHDSPSVRKSHNDGWKHKAAVRAYYAQFEQDLTQSLIQQKIKEYQEG 60
Query: 61 TAAF 64
F
Sbjct: 61 KTGF 64
>gi|431916846|gb|ELK16606.1| UHRF1-binding protein 1 [Pteropus alecto]
Length = 1654
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|67971420|dbj|BAE02052.1| unnamed protein product [Macaca fascicularis]
Length = 198
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|297290639|ref|XP_001111611.2| PREDICTED: hypothetical protein LOC718654 [Macaca mulatta]
Length = 213
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 55 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 107
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 108 TAAFQQ 113
>gi|402866738|ref|XP_003897532.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Papio anubis]
Length = 213
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 55 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 107
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 108 TAAFQQ 113
>gi|115738273|ref|XP_789197.2| PREDICTED: uncharacterized protein LOC584236 [Strongylocentrotus
purpuratus]
Length = 367
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 50/70 (71%), Gaps = 7/70 (10%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTA 62
RYYCDYCDTYLTHDSPSVRK H G KHK NVR YYQ++ E+Q QSLID+ TA
Sbjct: 222 RYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVRIYYQKWMEEQAQSLIDK-------TTA 274
Query: 63 AFQQVGAAYN 72
AFQ A+N
Sbjct: 275 AFQAGKIAHN 284
>gi|324523192|gb|ADY48208.1| U1 small nuclear ribonucleoprotein C [Ascaris suum]
Length = 126
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E+Q Q L+D K +L Q
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRIFYQKWMEEQAQKLVDATAKAYLQQ 60
Query: 61 TAAFQQVGA 69
A + A
Sbjct: 61 KARIEATRA 69
>gi|317418679|emb|CBN80717.1| U1 small nuclear ribonucleoprotein C [Dicentrarchus labrax]
Length = 246
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|348575940|ref|XP_003473746.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cavia
porcellus]
Length = 198
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 40 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 92
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 93 TAAFQQ 98
>gi|410925753|ref|XP_003976344.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Takifugu
rubripes]
Length = 157
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|296193910|ref|XP_002744727.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Callithrix
jacchus]
Length = 159
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|156375087|ref|XP_001629914.1| predicted protein [Nematostella vectensis]
gi|363805523|sp|A7SEP9.1|RU1C_NEMVE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|156216924|gb|EDO37851.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR YYQ++ E+Q Q+LIDQ
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNNGRKHKENVRFYYQKWMEEQAQTLIDQ-------T 53
Query: 61 TAAFQ 65
TAAFQ
Sbjct: 54 TAAFQ 58
>gi|291396656|ref|XP_002714640.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
Length = 159
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|417408325|gb|JAA50723.1| Putative u1 snrnp-specific protein c, partial [Desmodus rotundus]
Length = 170
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 12 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 64
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 65 TAAFQQ 70
>gi|27545257|ref|NP_775358.1| U1 small nuclear ribonucleoprotein C [Danio rerio]
gi|82177316|sp|Q8JGS0.1|RU1C_DANRE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|20977573|gb|AAM28214.1| U1 small nuclear ribonucleoprotein C [Danio rerio]
gi|60688605|gb|AAH91442.1| Small nuclear ribonucleoprotein polypeptide C [Danio rerio]
gi|182891922|gb|AAI65527.1| Snrpc protein [Danio rerio]
Length = 159
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|297300147|ref|XP_001098767.2| PREDICTED: hypothetical protein LOC710189 [Macaca mulatta]
Length = 159
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|380793437|gb|AFE68594.1| U1 small nuclear ribonucleoprotein C, partial [Macaca mulatta]
Length = 128
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|62859983|ref|NP_001016598.1| U1 small nuclear ribonucleoprotein C [Xenopus (Silurana)
tropicalis]
gi|363805534|sp|B0JYS7.1|RU1C_XENTR RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|166796116|gb|AAI58896.1| small nuclear ribonucleoprotein polypeptide C [Xenopus (Silurana)
tropicalis]
gi|213625522|gb|AAI70789.1| small nuclear ribonucleoprotein polypeptide C [Xenopus (Silurana)
tropicalis]
gi|213627726|gb|AAI70783.1| small nuclear ribonucleoprotein polypeptide C [Xenopus (Silurana)
tropicalis]
Length = 159
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|4507127|ref|NP_003084.1| U1 small nuclear ribonucleoprotein C [Homo sapiens]
gi|298104134|ref|NP_001177132.1| small nuclear ribonucleoprotein polypeptide C [Sus scrofa]
gi|114607004|ref|XP_001171894.1| PREDICTED: U1 small nuclear ribonucleoprotein C isoform 2 [Pan
troglodytes]
gi|149732134|ref|XP_001498478.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Equus
caballus]
gi|291396069|ref|XP_002714665.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
gi|296197957|ref|XP_002746505.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Callithrix
jacchus]
gi|301757023|ref|XP_002914348.1| PREDICTED: hypothetical protein LOC100467723 [Ailuropoda
melanoleuca]
gi|332259591|ref|XP_003278870.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Nomascus
leucogenys]
gi|344298792|ref|XP_003421075.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Loxodonta
africana]
gi|345778629|ref|XP_532115.3| PREDICTED: U1 small nuclear ribonucleoprotein C [Canis lupus
familiaris]
gi|397474217|ref|XP_003808583.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Pan paniscus]
gi|403261636|ref|XP_003923221.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Saimiri
boliviensis boliviensis]
gi|410958980|ref|XP_003986090.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Felis catus]
gi|426250173|ref|XP_004018812.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Ovis aries]
gi|426352827|ref|XP_004043907.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gorilla gorilla
gorilla]
gi|134093|sp|P09234.1|RU1C_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363548468|sp|Q32PA0.2|RU1C_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363805516|sp|E2RGI3.1|RU1C_CANFA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363805520|sp|F6TFD9.1|RU1C_MACMU RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|37543|emb|CAA31037.1| unnamed protein product [Homo sapiens]
gi|111305879|gb|AAI21083.1| Small nuclear ribonucleoprotein polypeptide C [Homo sapiens]
gi|111309436|gb|AAI21084.1| Small nuclear ribonucleoprotein polypeptide C [Homo sapiens]
gi|119624202|gb|EAX03797.1| small nuclear ribonucleoprotein polypeptide C, isoform CRA_c
[Homo sapiens]
gi|189065172|dbj|BAG34895.1| unnamed protein product [Homo sapiens]
gi|296474586|tpg|DAA16701.1| TPA: U1 small nuclear ribonucleoprotein C [Bos taurus]
gi|383414233|gb|AFH30330.1| U1 small nuclear ribonucleoprotein C [Macaca mulatta]
gi|384948964|gb|AFI38087.1| U1 small nuclear ribonucleoprotein C [Macaca mulatta]
gi|410223870|gb|JAA09154.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
gi|410262982|gb|JAA19457.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
gi|410300748|gb|JAA28974.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
gi|410338655|gb|JAA38274.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
Length = 159
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|147907144|ref|NP_001084130.1| U1 small nuclear ribonucleoprotein C [Xenopus laevis]
gi|548881|sp|Q03369.1|RU1C_XENLA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|65317|emb|CAA45354.1| snRNP C [Xenopus laevis]
gi|54038654|gb|AAH84206.1| Snrp1c protein [Xenopus laevis]
Length = 159
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|47220764|emb|CAG11833.1| unnamed protein product [Tetraodon nigroviridis]
Length = 147
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|334323611|ref|XP_001378181.2| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
Length = 159
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|148697420|gb|EDL29367.1| mCG5378 [Mus musculus]
Length = 159
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|224085239|ref|XP_002199189.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Taeniopygia
guttata]
Length = 159
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|432858275|ref|XP_004068879.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Oryzias
latipes]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|327271225|ref|XP_003220388.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Anolis
carolinensis]
Length = 159
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|118102526|ref|XP_418026.2| PREDICTED: U1 small nuclear ribonucleoprotein C [Gallus gallus]
gi|363805517|sp|E1C6F0.1|RU1C_CHICK RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 159
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|297677907|ref|XP_002816827.1| PREDICTED: U1 small nuclear ribonucleoprotein C, partial [Pongo
abelii]
Length = 83
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|259089482|ref|NP_001158541.1| U1 small nuclear ribonucleoprotein C [Oncorhynchus mykiss]
gi|225704718|gb|ACO08205.1| U1 small nuclear ribonucleoprotein C [Oncorhynchus mykiss]
Length = 157
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|6755596|ref|NP_035562.1| U1 small nuclear ribonucleoprotein C [Mus musculus]
gi|402534511|ref|NP_001257969.1| U1 small nuclear ribonucleoprotein C [Rattus norvegicus]
gi|6094204|sp|Q62241.1|RU1C_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363805530|sp|D3ZCL3.1|RU1C_RAT RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|1360017|emb|CAA65542.1| U1 snRNP-specific protein C [Mus musculus]
gi|1562574|gb|AAB08894.1| U1 snRNP-specific protein C [Mus musculus]
gi|14198360|gb|AAH08243.1| U1 small nuclear ribonucleoprotein C [Mus musculus]
gi|62204138|gb|AAH92266.1| U1 small nuclear ribonucleoprotein C [Mus musculus]
gi|74209391|dbj|BAE23273.1| unnamed protein product [Mus musculus]
gi|74223289|dbj|BAE40776.1| unnamed protein product [Mus musculus]
gi|148690604|gb|EDL22551.1| mCG21696 [Mus musculus]
gi|149043452|gb|EDL96903.1| rCG60784 [Rattus norvegicus]
Length = 159
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|326933859|ref|XP_003213016.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Meleagris
gallopavo]
Length = 158
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|351704048|gb|EHB06967.1| UHRF1-binding protein 1 [Heterocephalus glaber]
Length = 1596
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK 52
>gi|332226582|ref|XP_003262469.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Nomascus
leucogenys]
Length = 159
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK N++ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENMKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|209734596|gb|ACI68167.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 158
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQ 65
TAAFQ
Sbjct: 54 TAAFQ 58
>gi|209730778|gb|ACI66258.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
gi|209735108|gb|ACI68423.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 156
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|126325547|ref|XP_001362328.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
gi|363805521|sp|F7ARS3.1|RU1C_MONDO RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 138
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NVR YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
T AFQQ
Sbjct: 54 TTAFQQ 59
>gi|126337551|ref|XP_001378009.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
gi|126342474|ref|XP_001377139.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
gi|395547158|ref|XP_003775156.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Sarcophilus
harrisii]
Length = 138
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NVR YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
T AFQQ
Sbjct: 54 TTAFQQ 59
>gi|359320012|ref|XP_003639232.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Canis lupus
familiaris]
Length = 159
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
T AFQQ
Sbjct: 54 TTAFQQ 59
>gi|324519813|gb|ADY47485.1| U1 small nuclear ribonucleoprotein C [Ascaris suum]
Length = 138
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 77/144 (53%), Gaps = 23/144 (15%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E+Q Q L+D
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVD-------AT 53
Query: 61 TAAFQQ-----VGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVL--PRPGPS 113
T AF Q PR+P+ MP APL+P + P + P P P
Sbjct: 54 TKAFTQGRIGVAAPPVAAGGAGAAPRMPI----TMPGPRGAPLMPPIGAPPMRGPMPFPY 109
Query: 114 PP--GYVSAPGM---PPMMAPPGA 132
PP + PGM PP M PP A
Sbjct: 110 PPMGAAMGPPGMMIRPPFMMPPAA 133
>gi|348532444|ref|XP_003453716.1| PREDICTED: hypothetical protein LOC100701306 [Oreochromis
niloticus]
Length = 149
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|126335848|ref|XP_001374016.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
Length = 138
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NVR YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDYYQKWIEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
T AFQQ
Sbjct: 54 TTAFQQ 59
>gi|395533991|ref|XP_003769032.1| PREDICTED: uncharacterized protein LOC100921353, partial
[Sarcophilus harrisii]
Length = 268
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 7/64 (10%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTA 62
R+YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TA
Sbjct: 43 RFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTA 95
Query: 63 AFQQ 66
AFQQ
Sbjct: 96 AFQQ 99
>gi|209732846|gb|ACI67292.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 157
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|170070053|ref|XP_001869448.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
gi|167865897|gb|EDS29280.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
Length = 145
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ EQQ Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEQQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPV-LPTPVMPMTGSAPLVPGMRPPVL 107
TAAF + G A P+ V +P P M M ++PGM+ P L
Sbjct: 54 TAAF-KAGKIQQNPFTAGPPKPNVTIPPPGMGMAARPGMMPGMQQPPL 100
>gi|109111850|ref|XP_001101394.1| PREDICTED: hypothetical protein LOC706270 [Macaca mulatta]
Length = 159
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVR+ H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRRTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|293351364|ref|XP_001063116.2| PREDICTED: U1 small nuclear ribonucleoprotein C [Rattus
norvegicus]
gi|392331659|ref|XP_003752352.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Rattus
norvegicus]
gi|149052090|gb|EDM03907.1| rCG63495 [Rattus norvegicus]
Length = 159
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|115496404|ref|NP_001069802.1| U1 small nuclear ribonucleoprotein C [Bos taurus]
gi|79160256|gb|AAI08202.1| Small nuclear ribonucleoprotein polypeptide C [Bos taurus]
Length = 159
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+ YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKLYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|178847389|pdb|2VRD|A Chain A, The Structure Of The Zinc Finger From The Human
Spliceosomal Protein U1c
Length = 61
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|261860622|dbj|BAI46833.1| small nuclear ribonucleoprotein polypeptide C [synthetic
construct]
Length = 180
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
+ R+YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 22 LFRFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 74
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 75 TAAFQQ 80
>gi|355721051|gb|AES07136.1| small nuclear ribonucleoprotein polypeptide C [Mustela putorius
furo]
Length = 127
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 10 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKT------- 62
Query: 61 TAAFQQ 66
AAFQQ
Sbjct: 63 XAAFQQ 68
>gi|291387106|ref|XP_002710123.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
Length = 159
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
AAFQQ
Sbjct: 54 AAAFQQ 59
>gi|395817005|ref|XP_003781969.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform 1
[Otolemur garnettii]
gi|395817007|ref|XP_003781970.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform 2
[Otolemur garnettii]
Length = 159
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLT DSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTRDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|354488386|ref|XP_003506351.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cricetulus
griseus]
Length = 271
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 7/63 (11%)
Query: 4 YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAA 63
+YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TAA
Sbjct: 116 FYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAA 168
Query: 64 FQQ 66
FQQ
Sbjct: 169 FQQ 171
>gi|225734048|pdb|3CW1|L Chain L, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734057|pdb|3CW1|9 Chain 9, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734066|pdb|3CW1|0 Chain 0, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734075|pdb|3CW1|LL Chain l, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 77
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YY ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYCKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|66816575|ref|XP_642297.1| C2H2-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|74856662|sp|Q54YA5.1|RU1C_DICDI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|60470360|gb|EAL68340.1| C2H2-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 174
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 70/129 (54%), Gaps = 18/129 (13%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCD YLTHDSPSVRK H G +HK V+ +YQQFE + TQSLI+ R+KE+
Sbjct: 1 MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEYEES 60
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPP----- 115
L +P + ++PTP M + +LP G PP
Sbjct: 61 KGR------------LIHQPPMGIIPTPYGQMY-QQQQQQQQQQGILPFQGMQPPPHQQQ 107
Query: 116 GYVSAPGMP 124
G V +PGMP
Sbjct: 108 GMVLSPGMP 116
>gi|157136350|ref|XP_001663716.1| hypothetical protein AaeL_AAEL013527 [Aedes aegypti]
gi|108869989|gb|EAT34214.1| AAEL013527-PB [Aedes aegypti]
Length = 144
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 12/111 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPV-LPTPVMPMTGSAPLVPGM---RPPVL 107
TAAF+ A N A P+ V +P P M M ++PGM PP+L
Sbjct: 54 TAAFKAGKIAQNP-FSAGPPKPNVAIPPPSMGMPARPGMIPGMPAGAPPLL 103
>gi|391328640|ref|XP_003738794.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Metaseiulus
occidentalis]
Length = 144
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDT+LTHDSPSVRK H G KHK NVR YYQ++ E Q Q+LIDQ
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHCGGRKHKENVRFYYQKWVEDQAQNLIDQ-------T 53
Query: 61 TAAFQQ 66
TAAF+Q
Sbjct: 54 TAAFKQ 59
>gi|308470268|ref|XP_003097368.1| hypothetical protein CRE_16270 [Caenorhabditis remanei]
gi|308240217|gb|EFO84169.1| hypothetical protein CRE_16270 [Caenorhabditis remanei]
Length = 142
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQ 52
>gi|449267025|gb|EMC78001.1| U1 small nuclear ribonucleoprotein C, partial [Columba livia]
Length = 157
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 7/64 (10%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTA 62
R+YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TA
Sbjct: 1 RFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTA 53
Query: 63 AFQQ 66
AFQQ
Sbjct: 54 AFQQ 57
>gi|341877918|gb|EGT33853.1| hypothetical protein CAEBREN_07221 [Caenorhabditis brenneri]
gi|341896000|gb|EGT51935.1| hypothetical protein CAEBREN_11652 [Caenorhabditis brenneri]
Length = 142
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQ 52
>gi|209730930|gb|ACI66334.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
gi|303660658|gb|ADM16002.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 156
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H + KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSDRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|268553375|ref|XP_002634673.1| Hypothetical protein CBG19656 [Caenorhabditis briggsae]
gi|363805514|sp|A8XW44.1|RU1C_CAEBR RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 142
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQ 52
>gi|312082852|ref|XP_003143616.1| hypothetical protein LOAG_08036 [Loa loa]
gi|307761219|gb|EFO20453.1| hypothetical protein LOAG_08036 [Loa loa]
Length = 128
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E+Q Q L+D
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVD 51
>gi|195391204|ref|XP_002054253.1| GJ24347 [Drosophila virilis]
gi|194152339|gb|EDW67773.1| GJ24347 [Drosophila virilis]
Length = 144
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 80/151 (52%), Gaps = 31/151 (20%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPG-PSPPGYVS 119
TAAF + G N P P TG + P M P PRPG P+ P Y+
Sbjct: 54 TAAF-KAGKITNNPFAG--------PAPGNKPTGVSIPPPNMGAP--PRPGMPNMPPYMQ 102
Query: 120 APGMPPMMAPPGAPSAPGQLNGFPRPPAVMN 150
P M P+MAP G RPP ++N
Sbjct: 103 -PMMNPLMAPTGI-----------RPPPILN 121
>gi|17539712|ref|NP_501490.1| Protein F08B4.7 [Caenorhabditis elegans]
gi|74961216|sp|P90815.1|RU1C_CAEEL RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|351060028|emb|CCD67653.1| Protein F08B4.7 [Caenorhabditis elegans]
Length = 142
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQ 52
>gi|402590067|gb|EJW83998.1| U1 zinc finger protein [Wuchereria bancrofti]
Length = 128
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E+Q Q L+D
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVD 51
>gi|170587258|ref|XP_001898395.1| U1 zinc finger [Brugia malayi]
gi|158594221|gb|EDP32807.1| U1 zinc finger [Brugia malayi]
Length = 128
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E+Q Q L+D
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVD 51
>gi|157136352|ref|XP_001663717.1| hypothetical protein AaeL_AAEL013527 [Aedes aegypti]
gi|122104823|sp|Q16IW3.1|RU1C_AEDAE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|108869990|gb|EAT34215.1| AAEL013527-PA [Aedes aegypti]
Length = 154
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 12/111 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPV-LPTPVMPMTGSAPLVPGM---RPPVL 107
TAAF+ A N A P+ V +P P M M ++PGM PP+L
Sbjct: 54 TAAFKAGKIAQNP-FSAGPPKPNVAIPPPSMGMPARPGMIPGMPAGAPPLL 103
>gi|391328711|ref|XP_003738828.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Metaseiulus
occidentalis]
Length = 139
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDT+LTHDSPSVRK H G KHK NVR YYQ++ E Q Q+LIDQ
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHCGGRKHKENVRFYYQKWVEDQAQNLIDQT------- 53
Query: 61 TAAFQQ 66
TAAF+Q
Sbjct: 54 TAAFKQ 59
>gi|62897757|dbj|BAD96818.1| small nuclear ribonucleoprotein polypeptide C variant [Homo
sapiens]
Length = 159
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYCDTYLTHDSPSVRK H +G KH+ N + YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHRENEKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|363805511|sp|E3X5D6.1|RU1C_ANODA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|312375503|gb|EFR22865.1| hypothetical protein AND_14095 [Anopheles darlingi]
Length = 151
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 12/111 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLA-QRPRLPVLPTPVMPMTGSAPLVPGM---RPPVL 107
TAA++ A N +P + + P P M M ++PGM PP+L
Sbjct: 54 TAAYKAGKIAQNPFTAGPPKPNISI-PPPTMNMPPRPGIIPGMPAGAPPLL 103
>gi|281338444|gb|EFB14028.1| hypothetical protein PANDA_002243 [Ailuropoda melanoleuca]
Length = 131
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK 52
>gi|19577373|emb|CAD27755.1| putative sRNP [Anopheles gambiae]
Length = 151
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 11/110 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLA-QRPRLPVLPTPVMPMTGSAPLVPGM--RPPVL 107
TAA++ A N +P + +P P M M ++PGM PP+L
Sbjct: 54 TAAYKAGKIAPNPFTAGPPKPNI-SIPPPTMNMPPRPGMIPGMPGAPPLL 102
>gi|58395833|ref|XP_321527.2| AGAP001584-PA [Anopheles gambiae str. PEST]
gi|122064007|sp|Q7PXU6.2|RU1C_ANOGA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|55233767|gb|EAA00983.2| AGAP001584-PA [Anopheles gambiae str. PEST]
Length = 152
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 12/111 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLA-QRPRLPVLPTPVMPMTGSAPLVPGM---RPPVL 107
TAA++ A N +P + +P P M M ++PGM PP+L
Sbjct: 54 TAAYKAGKIAPNPFTAGPPKPNI-SIPPPTMNMPPRPGMIPGMPAGAPPLL 103
>gi|170034282|ref|XP_001845003.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
gi|167875636|gb|EDS39019.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
Length = 138
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 12/111 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMETQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYNQHLLAQRPRLP--VLPTPVMPMTGSAPLVPGM--RPPVL 107
TAA+ + G P+ P +P P M + P++PGM +PP+L
Sbjct: 54 TAAY-KAGKIQQNPFTVGPPKPPNVAIPPPNMGIPTRPPMIPGMQQQPPLL 103
>gi|395832600|ref|XP_003804122.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
C [Otolemur garnettii]
Length = 247
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 7/62 (11%)
Query: 5 YCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAF 64
YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TAAF
Sbjct: 93 YCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAF 145
Query: 65 QQ 66
QQ
Sbjct: 146 QQ 147
>gi|346464873|gb|AEO32281.1| hypothetical protein [Amblyomma maculatum]
Length = 159
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKFYYQKWMEEQAQNLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|330798431|ref|XP_003287256.1| hypothetical protein DICPUDRAFT_32190 [Dictyostelium purpureum]
gi|325082716|gb|EGC36189.1| hypothetical protein DICPUDRAFT_32190 [Dictyostelium purpureum]
Length = 84
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 46/57 (80%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
MP+YYCDYCD YLTHDSPSVRK H G +HK V+ YYQQFE + TQSLI+ R+KE+
Sbjct: 1 MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLYYQQFEAEFTQSLIESRLKEY 57
>gi|427786831|gb|JAA58867.1| Putative u1 snrnp-specific protein c [Rhipicephalus pulchellus]
Length = 164
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKFYYQKWMEEQAQNLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|189234617|ref|XP_975233.2| PREDICTED: similar to CG5454 CG5454-PA [Tribolium castaneum]
gi|270001649|gb|EEZ98096.1| hypothetical protein TcasGA2_TC000509 [Tribolium castaneum]
Length = 153
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYN 72
TAAF+ A N
Sbjct: 54 TAAFKAGKIANN 65
>gi|297294570|ref|XP_002804466.1| PREDICTED: hypothetical protein LOC100430762 [Macaca mulatta]
Length = 159
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+ YCDYC+TYLTHDSPSV K H++G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKSYCDYCNTYLTHDSPSVGKTHHSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|291405007|ref|XP_002718945.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
Length = 159
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCD CDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLI +
Sbjct: 1 MPKFYCDCCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIHK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|296189227|ref|XP_002742697.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Callithrix
jacchus]
Length = 159
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++Y DYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ +
Sbjct: 1 MPKFYYDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTV------ 54
Query: 61 TAAFQQ 66
AAFQQ
Sbjct: 55 -AAFQQ 59
>gi|119624201|gb|EAX03796.1| small nuclear ribonucleoprotein polypeptide C, isoform CRA_b
[Homo sapiens]
Length = 181
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 7/62 (11%)
Query: 5 YCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAF 64
YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TAAF
Sbjct: 27 YCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAF 79
Query: 65 QQ 66
QQ
Sbjct: 80 QQ 81
>gi|357625180|gb|EHJ75707.1| hypothetical protein KGM_20795 [Danaus plexippus]
Length = 167
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYN 72
TAAF+ A N
Sbjct: 54 TAAFKAGKIAQN 65
>gi|432109719|gb|ELK33778.1| U1 small nuclear ribonucleoprotein C [Myotis davidii]
Length = 108
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
+ R+YCDYCDTYLTHDSPSVRK H +G KHK NV Y Q++ E+Q QSLID+
Sbjct: 18 LSRFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVEDYCQKWMEEQAQSLIDK-------T 70
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 71 TAAFQQ 76
>gi|242010156|ref|XP_002425842.1| U1 small nuclear ribonucleoprotein C, putative [Pediculus humanus
corporis]
gi|363805525|sp|E0VI98.1|RU1C_PEDHC RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|212509775|gb|EEB13104.1| U1 small nuclear ribonucleoprotein C, putative [Pediculus humanus
corporis]
Length = 173
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|119616180|gb|EAW95774.1| hCG1758872 [Homo sapiens]
Length = 155
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YCDYC+TYLTHDSP VRK H +G KHK NV+ YYQ++ ++Q QSLID+
Sbjct: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDK-------T 53
Query: 61 TAAFQQ 66
TAAFQQ
Sbjct: 54 TAAFQQ 59
>gi|195453368|ref|XP_002073758.1| GK12970 [Drosophila willistoni]
gi|194169843|gb|EDW84744.1| GK12970 [Drosophila willistoni]
Length = 146
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|194900072|ref|XP_001979581.1| GG16240 [Drosophila erecta]
gi|190651284|gb|EDV48539.1| GG16240 [Drosophila erecta]
Length = 145
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|125775241|ref|XP_001358872.1| GA18892 [Drosophila pseudoobscura pseudoobscura]
gi|195144768|ref|XP_002013368.1| GL24104 [Drosophila persimilis]
gi|121990949|sp|Q298E0.1|RU1C_DROPS RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|54638613|gb|EAL28015.1| GA18892 [Drosophila pseudoobscura pseudoobscura]
gi|194102311|gb|EDW24354.1| GL24104 [Drosophila persimilis]
Length = 146
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|24648101|ref|NP_650767.1| small ribonucleoprotein particle U1 subunit C [Drosophila
melanogaster]
gi|195356988|ref|XP_002044904.1| GM13647 [Drosophila sechellia]
gi|195497814|ref|XP_002096260.1| GE25158 [Drosophila yakuba]
gi|195569781|ref|XP_002102887.1| GD20140 [Drosophila simulans]
gi|74947819|sp|Q9VE17.1|RU1C_DROME RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|7300460|gb|AAF55616.1| small ribonucleoprotein particle U1 subunit C [Drosophila
melanogaster]
gi|28316881|gb|AAO39463.1| RH29440p [Drosophila melanogaster]
gi|194123797|gb|EDW45840.1| GM13647 [Drosophila sechellia]
gi|194182361|gb|EDW95972.1| GE25158 [Drosophila yakuba]
gi|194198814|gb|EDX12390.1| GD20140 [Drosophila simulans]
gi|220949292|gb|ACL87189.1| snRNP-U1-PA [synthetic construct]
gi|220958498|gb|ACL91792.1| snRNP-U1-PA [synthetic construct]
Length = 145
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|307206317|gb|EFN84374.1| U1 small nuclear ribonucleoprotein C [Harpegnathos saltator]
Length = 175
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ +YQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQQVGAAYN 72
TAAF+ A N
Sbjct: 54 TAAFKAGKIASN 65
>gi|321478476|gb|EFX89433.1| hypothetical protein DAPPUDRAFT_40364 [Daphnia pulex]
Length = 63
Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
RYYCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E Q QSLID
Sbjct: 1 RYYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKFYYQKWMEDQAQSLID 49
>gi|195054176|ref|XP_001994002.1| GH22525 [Drosophila grimshawi]
gi|195080474|ref|XP_001997274.1| GH23369 [Drosophila grimshawi]
gi|193895872|gb|EDV94738.1| GH22525 [Drosophila grimshawi]
gi|193905972|gb|EDW04839.1| GH23369 [Drosophila grimshawi]
Length = 144
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|194764807|ref|XP_001964520.1| GF23008 [Drosophila ananassae]
gi|190614792|gb|EDV30316.1| GF23008 [Drosophila ananassae]
Length = 147
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|193594149|ref|XP_001943959.1| PREDICTED: hypothetical protein LOC100159876 [Acyrthosiphon
pisum]
Length = 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
>gi|443731135|gb|ELU16372.1| hypothetical protein CAPTEDRAFT_227784 [Capitella teleta]
Length = 144
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+Y+CDYCDT+LTHDSPSVRK H G KHK NVR YYQ++ E Q Q L+D
Sbjct: 1 MPKYFCDYCDTFLTHDSPSVRKTHCNGRKHKDNVRDYYQKWLEDQVQKLVDD-------T 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|195112875|ref|XP_002000997.1| GI22226 [Drosophila mojavensis]
gi|193917591|gb|EDW16458.1| GI22226 [Drosophila mojavensis]
Length = 144
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KH+ NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|114145435|ref|NP_001041454.1| U1 small nuclear ribonucleoprotein C [Ciona intestinalis]
gi|121961656|sp|Q1RLC9.1|RU1C_CIOIN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|93003106|tpd|FAA00136.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 122
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+Y+CDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ + E+Q Q LID+
Sbjct: 1 MPKYFCDYCDTYLTHDSPSVRKTHCSGRKHKDNVKMYYQTWMEEQAQELIDK-------T 53
Query: 61 TAAFQQ 66
T AFQ+
Sbjct: 54 TQAFQK 59
>gi|307189202|gb|EFN73650.1| U1 small nuclear ribonucleoprotein C [Camponotus floridanus]
Length = 175
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ +YQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|239792749|dbj|BAH72680.1| ACYPI001217 [Acyrthosiphon pisum]
Length = 146
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
>gi|332017058|gb|EGI57857.1| U1 small nuclear ribonucleoprotein C [Acromyrmex echinatior]
Length = 175
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ +YQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|110758091|ref|XP_001120253.1| PREDICTED: hypothetical protein LOC725416 [Apis mellifera]
gi|340720371|ref|XP_003398614.1| PREDICTED: hypothetical protein LOC100646869 [Bombus terrestris]
gi|350398112|ref|XP_003485091.1| PREDICTED: hypothetical protein LOC100744638 [Bombus impatiens]
gi|380018123|ref|XP_003692985.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Apis
florea]
gi|383847483|ref|XP_003699382.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Megachile
rotundata]
Length = 170
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ +YQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|358342032|dbj|GAA49587.1| U1 small nuclear ribonucleoprotein C [Clonorchis sinensis]
Length = 714
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
RYYCDYCDTYLTHDSPSVRK H G HK NVR YYQ++ E+Q Q L+D
Sbjct: 372 RYYCDYCDTYLTHDSPSVRKTHCGGRNHKDNVRDYYQKWLEEQVQKLVDH 421
>gi|217330625|ref|NP_001136101.1| small nuclear ribonucleoprotein polypeptide C [Nasonia
vitripennis]
Length = 171
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ +YQ++ E+Q Q LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLID-------AT 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|56756402|gb|AAW26374.1| SJCHGC01443 protein [Schistosoma japonicum]
gi|226471218|emb|CAX70690.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226471220|emb|CAX70691.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488016|emb|CAX75673.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488018|emb|CAX75674.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488020|emb|CAX75675.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488022|emb|CAX75676.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
Length = 132
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 41/52 (78%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP+YYCDYCDTYLTHDSPSVRK H G HK NV+ YYQ++ E+Q Q L+D
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCGGRNHKDNVKEYYQKWLEEQVQRLVDH 52
>gi|256062496|ref|XP_002570341.1| cleavage and polyadenylation specificity factor [Schistosoma
mansoni]
gi|256087991|ref|XP_002580144.1| cleavage and polyadenylation specificity factor [Schistosoma
mansoni]
gi|227294399|emb|CAY18730.1| cleavage and polyadenylation specificity factor,putative
[Schistosoma mansoni]
gi|238665654|emb|CAZ36383.1| cleavage and polyadenylation specificity factor,putative
[Schistosoma mansoni]
Length = 132
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 41/52 (78%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP+YYCDYCDTYLTHDSPSVRK H G HK NV+ YYQ++ E+Q Q L+D
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCGGRNHKDNVKEYYQKWLEEQVQRLVDH 52
>gi|241640727|ref|XP_002410902.1| U1 small nuclear ribonucleoprotein C, putative [Ixodes
scapularis]
gi|363805519|sp|B7Q2M2.1|RU1C_IXOSC RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|215503600|gb|EEC13094.1| U1 small nuclear ribonucleoprotein C, putative [Ixodes
scapularis]
Length = 150
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 7/63 (11%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTA 62
RYYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID TA
Sbjct: 11 RYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKFYYQKWMEEQAQNLID-------ATTA 63
Query: 63 AFQ 65
AF+
Sbjct: 64 AFK 66
>gi|260805050|ref|XP_002597400.1| hypothetical protein BRAFLDRAFT_69314 [Branchiostoma floridae]
gi|363805513|sp|C3Z1P5.1|RU1C_BRAFL RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|229282665|gb|EEN53412.1| hypothetical protein BRAFLDRAFT_69314 [Branchiostoma floridae]
Length = 221
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 87/197 (44%), Gaps = 53/197 (26%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+Y+CDYCDTYLTHDSPSVRK H G KHK NVR YYQ++ E+Q Q LIDQ
Sbjct: 1 MPKYFCDYCDTYLTHDSPSVRKTHCNGRKHKENVRVYYQKWMEEQAQQLIDQT------- 53
Query: 61 TAAFQ--------------QVGA---------AYNQHLLAQRPRLPVLPTPVMPMTGSAP 97
TAAFQ QVG A Q Q ++ P P
Sbjct: 54 TAAFQAGKIPNNPFPNAAGQVGNEPGAKVLPPAILQAAAFQAGKIASNPFPTSQAGPGPQ 113
Query: 98 LVPGMRPPVLPRPGPSPPGYVSAPGMPPMMAPPGAP-SAPGQLNGFPRPPAVMNPTAVSG 156
M PP PP + PG P SAP PR P + T G
Sbjct: 114 GGGTMIPP------------------PPSLQGPGGPGSAPAP----PRMPGPLLMTPPPG 151
Query: 157 SAAPPASSSGAPSMATP 173
+AAP + GAP++ P
Sbjct: 152 AAAPGMAPPGAPTLPQP 168
>gi|302831293|ref|XP_002947212.1| hypothetical protein VOLCADRAFT_116316 [Volvox carteri f.
nagariensis]
gi|300267619|gb|EFJ51802.1| hypothetical protein VOLCADRAFT_116316 [Volvox carteri f.
nagariensis]
Length = 128
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MPRYYCDYCDTYLTH+S +VRKQHN+GYKHKANVR+YY F
Sbjct: 1 MPRYYCDYCDTYLTHESAAVRKQHNSGYKHKANVRNYYNNF 41
>gi|321261858|ref|XP_003195648.1| U1 small nuclear ribonucleoprotein [Cryptococcus gattii WM276]
gi|317462122|gb|ADV23861.1| U1 small nuclear ribonucleoprotein, putative [Cryptococcus gattii
WM276]
Length = 214
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M +YYCDYCD YLTHDS + RK HN+G H ANVR Y+ Q QSLIDQ I++H
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQH 57
>gi|58271212|ref|XP_572762.1| U1 small nuclear ribonucleoprotein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114610|ref|XP_774013.1| hypothetical protein CNBH0600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|74683500|sp|Q5KC16.1|RU1C_CRYNJ RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|50256643|gb|EAL19366.1| hypothetical protein CNBH0600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229021|gb|AAW45455.1| U1 small nuclear ribonucleoprotein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 220
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M +YYCDYCD YLTHDS + RK HN+G H ANVR Y+ Q QSLIDQ I++H
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQH 57
>gi|428164783|gb|EKX33797.1| hypothetical protein GUITHDRAFT_81129 [Guillardia theta CCMP2712]
Length = 82
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 45/73 (61%), Gaps = 14/73 (19%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKAN--------------VRSYYQQFEEQQT 46
MPRYYCDYCD +LTHDSPSVRKQHN+G KH+ N VR YY QF +Q
Sbjct: 1 MPRYYCDYCDVFLTHDSPSVRKQHNSGRKHRDNVSMSSWGAGGDREQVRDYYGQFVSKQA 60
Query: 47 QSLIDQRIKEHLG 59
QS+ID I G
Sbjct: 61 QSVIDSIISRREG 73
>gi|159474196|ref|XP_001695215.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276149|gb|EDP01923.1| predicted protein [Chlamydomonas reinhardtii]
Length = 154
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MPRYYCDYCDTYLTH+S +VRKQHN+GYKHKANVR+YY F
Sbjct: 1 MPRYYCDYCDTYLTHESAAVRKQHNSGYKHKANVRNYYNNF 41
>gi|405122446|gb|AFR97213.1| U1 small nuclear ribonucleoprotein [Cryptococcus neoformans var.
grubii H99]
Length = 222
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M +YYCDYCD YLTHDS + RK HN+G H ANVR Y+ Q QSLIDQ I++H
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQH 57
>gi|196012323|ref|XP_002116024.1| hypothetical protein TRIADDRAFT_9459 [Trichoplax adhaerens]
gi|190581347|gb|EDV21424.1| hypothetical protein TRIADDRAFT_9459 [Trichoplax adhaerens]
Length = 59
Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 5/64 (7%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTA 62
RY+CDYCDT+LTHDSPSVRK HN+G KHK NVR YYQQ+ ++ + + Q I Q+
Sbjct: 1 RYFCDYCDTFLTHDSPSVRKTHNSGRKHKDNVRLYYQQWYDENIRDQVAQGI-----QSP 55
Query: 63 AFQQ 66
AFQQ
Sbjct: 56 AFQQ 59
>gi|392568265|gb|EIW61439.1| Sua5/YciO/YrdC/YwlC family protein [Trametes versicolor FP-101664
SS1]
Length = 543
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|431908982|gb|ELK12573.1| U1 small nuclear ribonucleoprotein C [Pteropus alecto]
Length = 136
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
M ++YCDYCDTYLTHD PSVRK H G +HK NV+ YYQ+ E+Q QSLI++
Sbjct: 42 MLKFYCDYCDTYLTHDPPSVRKTHCNGRRHKENVKVYYQKRIEEQAQSLIEK-------T 94
Query: 61 TAAFQQ 66
T AFQQ
Sbjct: 95 TVAFQQ 100
>gi|340371949|ref|XP_003384507.1| PREDICTED: hypothetical protein LOC100634011 [Amphimedon
queenslandica]
Length = 138
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 40/55 (72%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIK 55
M +YYCDYCDTYLTHDSPSVRK HN+G +HK NVR YY + E Q QS I+
Sbjct: 1 MGKYYCDYCDTYLTHDSPSVRKTHNSGRRHKENVRLYYVNWLESQAQSFRMSLIR 55
>gi|307102929|gb|EFN51195.1| hypothetical protein CHLNCDRAFT_59317 [Chlorella variabilis]
Length = 207
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQS 48
M R+YCDYCD++LTHDSP+VRKQHN+GYKHK+NV++YY Q QT +
Sbjct: 1 MVRFYCDYCDSFLTHDSPAVRKQHNSGYKHKSNVKAYYLQASTYQTHT 48
>gi|328876695|gb|EGG25058.1| C2H2-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 149
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 43/58 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHL 58
MP+YYC+YCD YLTHDSPSVR+ H G H+ VR YYQQFE +S+ +QRIKE +
Sbjct: 1 MPKYYCEYCDKYLTHDSPSVRRSHIIGKVHQQAVRLYYQQFEADYHKSITEQRIKEMI 58
>gi|308800576|ref|XP_003075069.1| U1snrC U1 small nuclear ribonucleoprotein C, probable (IC)
[Ostreococcus tauri]
gi|119358875|emb|CAL52341.2| U1snrC U1 small nuclear ribonucleoprotein C, probable (IC)
[Ostreococcus tauri]
Length = 66
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFE 42
M RYYCDYCD +LTHDS +VRKQHN+G+KHKAN R+YY QF+
Sbjct: 1 MARYYCDYCDAFLTHDSATVRKQHNSGFKHKANARAYYAQFQ 42
>gi|403417354|emb|CCM04054.1| predicted protein [Fibroporia radiculosa]
Length = 241
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 30 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 81
>gi|109511276|ref|XP_001067425.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Rattus
norvegicus]
gi|293351240|ref|XP_002727732.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Rattus
norvegicus]
Length = 159
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
M + Y D CDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSL D+
Sbjct: 1 MLKVYWDDCDTYLTHDSPSVRKTHCSGQKHKENVKEYYQKWMEEQAQSLTDK-------T 53
Query: 61 TAAFQQ 66
TA FQQ
Sbjct: 54 TAVFQQ 59
>gi|167535798|ref|XP_001749572.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771964|gb|EDQ85623.1| predicted protein [Monosiga brevicollis MX1]
Length = 393
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQ 44
MPRYYCDYCD YLTHDSPSVRK HN G KHK VR +Y ++ E+
Sbjct: 1 MPRYYCDYCDAYLTHDSPSVRKTHNGGRKHKEAVRDFYAKWAEE 44
>gi|389744417|gb|EIM85600.1| zf-U1-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD YLTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVYLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|412994110|emb|CCO14621.1| U1 small nuclear ribonucleoprotein C [Bathycoccus prasinos]
Length = 111
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 40/46 (86%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQT 46
MPRYYC+YCD YLTHDSP+VR+QH +G+KHKANVR+YY QF + T
Sbjct: 1 MPRYYCEYCDAYLTHDSPTVRRQHISGFKHKANVRNYYLQFTDFNT 46
>gi|341886138|gb|EGT42073.1| hypothetical protein CAEBREN_06165 [Caenorhabditis brenneri]
Length = 151
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCD +LTHDS RK HN G +HK NVR +YQ++ E Q Q L+D + Q
Sbjct: 1 MPKYYCDYCDAFLTHDSLKGRKTHNEGRRHKDNVRGFYQKWLEAQAQKLVDNTARAFTAQ 60
>gi|336266836|ref|XP_003348185.1| hypothetical protein SMAC_04030 [Sordaria macrospora k-hell]
Length = 201
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 13/94 (13%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSI------- 53
Query: 61 TAAFQQVGAAYNQHLLAQR------PRLPVLPTP 88
T+++ G A+ +L Q P L V P P
Sbjct: 54 TSSYAAEGQAHANPMLPQNQPGGIPPGLGVFPPP 87
>gi|340923678|gb|EGS18581.1| hypothetical protein CTHT_0051860 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 283
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV YYQQ +++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVIDYYQQISQEKAQSVID 51
>gi|145343715|ref|XP_001416458.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576683|gb|ABO94751.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 53
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
M RYYCDYC+ +LTHDS +VRKQHN+G+KHKANVR+YY QF
Sbjct: 1 MARYYCDYCNAHLTHDSATVRKQHNSGFKHKANVRAYYAQF 41
>gi|325184914|emb|CCA19406.1| U1 small nuclear ribonucleoprotein C putative [Albugo laibachii
Nc14]
Length = 177
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 36/46 (78%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQT 46
MPRYYCDYCDTYLTHDS + RKQHN G+KH+ NV+ YY Q QT
Sbjct: 47 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYDQLLANQT 92
>gi|393216184|gb|EJD01675.1| zf-U1-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 211
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD YLTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVYLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|363805630|sp|Q4WQM6.3|RU1C_ASPFU RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 216
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVID 51
>gi|296417462|ref|XP_002838376.1| hypothetical protein [Tuber melanosporum Mel28]
gi|363805532|sp|D5GDH4.1|RU1C_TUBMM RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|295634306|emb|CAZ82567.1| unnamed protein product [Tuber melanosporum]
Length = 220
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSISVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|238599142|ref|XP_002394798.1| hypothetical protein MPER_05256 [Moniliophthora perniciosa FA553]
gi|215464416|gb|EEB95728.1| hypothetical protein MPER_05256 [Moniliophthora perniciosa FA553]
Length = 64
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANV+ YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGKNHLANVKDYYASLGHDKAQSIIDQ 52
>gi|392593018|gb|EIW82344.1| zf-U1-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 207
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|308462127|ref|XP_003093349.1| hypothetical protein CRE_30184 [Caenorhabditis remanei]
gi|308250298|gb|EFO94250.1| hypothetical protein CRE_30184 [Caenorhabditis remanei]
Length = 208
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCD +LTHDS RK HN G KHK VR +YQ++ E Q Q ++DQ +
Sbjct: 82 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLESQAQKMVDQTAQ----- 136
Query: 61 TAAFQQ 66
AFQQ
Sbjct: 137 --AFQQ 140
>gi|170111352|ref|XP_001886880.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638238|gb|EDR02517.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 205
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H +NVR YY Q QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSTSVRKAHNSGRNHLSNVRDYYASLGHDQAQSIIDQ 52
>gi|320031630|gb|EFW13590.1| hypothetical protein CPSG_09804 [Coccidioides posadasii str.
Silveira]
Length = 241
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HNAG H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVID 51
>gi|409079691|gb|EKM80052.1| hypothetical protein AGABI1DRAFT_113282 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198546|gb|EKV48472.1| hypothetical protein AGABI2DRAFT_192075 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 37/52 (71%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNNGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|392863975|gb|EAS35237.2| hypothetical protein CIMG_00556 [Coccidioides immitis RS]
Length = 240
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHL-- 58
MP+++CDYCD YLTHDS SVRK HNAG H NV YYQQ ++ QS+ID +
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 59 GQTAA 63
GQ AA
Sbjct: 61 GQAAA 65
>gi|449549920|gb|EMD40885.1| hypothetical protein CERSUDRAFT_111466 [Ceriporiopsis
subvermispora B]
Length = 218
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|409050336|gb|EKM59813.1| hypothetical protein PHACADRAFT_138067 [Phanerochaete carnosa
HHB-10118-sp]
Length = 201
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|302694089|ref|XP_003036723.1| hypothetical protein SCHCODRAFT_83874 [Schizophyllum commune
H4-8]
gi|300110420|gb|EFJ01821.1| hypothetical protein SCHCODRAFT_83874 [Schizophyllum commune
H4-8]
Length = 209
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN G H ANVR YY + Q++IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNNGRNHLANVRDYYASLGHDKAQNIIDQ 52
>gi|301105202|ref|XP_002901685.1| U1 small nuclear ribonucleoprotein C, putative [Phytophthora
infestans T30-4]
gi|363805526|sp|D0NHA2.1|RU1C_PHYIT RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|262100689|gb|EEY58741.1| U1 small nuclear ribonucleoprotein C, putative [Phytophthora
infestans T30-4]
Length = 138
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MPRYYCDYCDTYLTHDS + RKQHN G+KH+ NV+ YY+QF
Sbjct: 1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQF 41
>gi|169861668|ref|XP_001837468.1| hypothetical protein CC1G_01380 [Coprinopsis cinerea
okayama7#130]
gi|363805518|sp|A8NYM5.1|RU1C_COPC7 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|116501489|gb|EAU84384.1| hypothetical protein CC1G_01380 [Coprinopsis cinerea
okayama7#130]
Length = 209
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 52
>gi|390601511|gb|EIN10905.1| zf-U1-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 193
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H ANVR YY + Q++IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQNIIDQ 52
>gi|384500985|gb|EIE91476.1| hypothetical protein RO3G_16187 [Rhizopus delemar RA 99-880]
Length = 160
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP+YYC+YCD +LTHDS SVRK HNAG H NVR+YY + + + Q++ID+
Sbjct: 1 MPKYYCEYCDIFLTHDSSSVRKAHNAGKNHILNVRNYYAEISQDKAQAIIDE 52
>gi|380091121|emb|CCC11327.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 222
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|363805627|sp|Q5BBX9.2|RU1C_EMENI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 236
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ +++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQQIGQEKAQSVID 51
>gi|449296075|gb|EMC92095.1| hypothetical protein BAUCODRAFT_53356, partial [Baudoinia
compniacensis UAMH 10762]
Length = 60
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+Y+CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKYFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|392572818|gb|EIW65962.1| hypothetical protein TREMEDRAFT_72500 [Tremella mesenterica DSM
1558]
Length = 193
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M +YYCDYCD YLTHDS + RK HN G H +NVR Y+ QS+IDQ +++H
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNTGRNHVSNVRDYFASLGHDTAQSIIDQIVQQH 57
>gi|452983603|gb|EME83361.1| hypothetical protein MYCFIDRAFT_72224 [Pseudocercospora fijiensis
CIRAD86]
Length = 208
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ Q++ID G
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVID-------GI 53
Query: 61 TAAFQQVGAAYNQHLLAQRPRLP 83
T+++ AA Q + P+LP
Sbjct: 54 TSSY----AAEGQSMPMPNPQLP 72
>gi|217330628|ref|NP_001136102.1| small nuclear ribonucleoprotein polypeptide C-like [Nasonia
vitripennis]
Length = 117
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 7/65 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYC+YCDTYL +DSP+V H G KHK NV +YYQ++ E++TQ +ID+
Sbjct: 1 MPKYYCEYCDTYLANDSPTVTDTHRQGRKHKDNVTNYYQKWLEEKTQKMIDE-------A 53
Query: 61 TAAFQ 65
TAAF+
Sbjct: 54 TAAFK 58
>gi|453086668|gb|EMF14710.1| zf-U1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 205
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ Q++ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVID 51
>gi|308462125|ref|XP_003093348.1| hypothetical protein CRE_30173 [Caenorhabditis remanei]
gi|308250297|gb|EFO94249.1| hypothetical protein CRE_30173 [Caenorhabditis remanei]
Length = 127
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYCDYCD +LTHDS RK HN G KHK VR +YQ++ E Q Q ++DQ +
Sbjct: 1 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLEAQAQKMVDQTAQ----- 55
Query: 61 TAAFQQ 66
AFQQ
Sbjct: 56 --AFQQ 59
>gi|261197263|ref|XP_002625034.1| conserved hypothetical protein [Ajellomyces dermatitidis
SLH14081]
gi|239595664|gb|EEQ78245.1| conserved hypothetical protein [Ajellomyces dermatitidis
SLH14081]
Length = 246
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQ+ ++ QS+ID + +
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAE 60
Query: 61 TAA 63
A
Sbjct: 61 GQA 63
>gi|402226556|gb|EJU06616.1| zf-U1-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 193
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
MP++YCDYCD +LTHDS SVRK HN+G H NV+ YY + Q +IDQ K +
Sbjct: 1 MPKHYCDYCDVFLTHDSTSVRKAHNSGRNHLQNVKDYYASLGHDKAQDIIDQITKAY 57
>gi|239606653|gb|EEQ83640.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 251
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQ+ ++ QS+ID + +
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAE 60
Query: 61 TAA 63
A
Sbjct: 61 GQA 63
>gi|430811200|emb|CCJ31294.1| unnamed protein product [Pneumocystis jirovecii]
gi|430812248|emb|CCJ30340.1| unnamed protein product [Pneumocystis jirovecii]
Length = 160
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 4 YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQT 61
+YCDYCD +LTHDS SVRK HNAG H NVR YYQ+ ++ Q++ID K + Q+
Sbjct: 3 HYCDYCDVFLTHDSASVRKAHNAGKNHITNVREYYQEISHEKAQNVIDSITKAYENQS 60
>gi|148668213|gb|EDL00543.1| mCG1042514 [Mus musculus]
Length = 159
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 7/66 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YC YCD YLTH+SPS+RK H +G KHK NV+ Q++ E+Q Q+LID+
Sbjct: 1 MPKFYCYYCDMYLTHNSPSMRKTHCSGRKHKENVKENCQKWMEEQVQTLIDK-------P 53
Query: 61 TAAFQQ 66
TA FQQ
Sbjct: 54 TATFQQ 59
>gi|429858203|gb|ELA33032.1| u1 small nuclear ribonucleoprotein [Colletotrichum
gloeosporioides Nara gc5]
Length = 193
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID-------SI 53
Query: 61 TAAFQQVGAAYNQHLLAQ 78
T+++ G A+N +L Q
Sbjct: 54 TSSYAAEGQAHNNPMLPQ 71
>gi|336472579|gb|EGO60739.1| hypothetical protein NEUTE1DRAFT_127544 [Neurospora tetrasperma
FGSC 2508]
gi|350294186|gb|EGZ75271.1| zf-U1-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 216
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|398398882|ref|XP_003852898.1| hypothetical protein MYCGRDRAFT_104068 [Zymoseptoria tritici
IPO323]
gi|339472780|gb|EGP87874.1| hypothetical protein MYCGRDRAFT_104068 [Zymoseptoria tritici
IPO323]
Length = 204
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ Q++ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVID 51
>gi|85102947|ref|XP_961427.1| hypothetical protein NCU01341 [Neurospora crassa OR74A]
gi|363805524|sp|Q1K7T5.1|RU1C_NEUCR RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|11595611|emb|CAC18231.1| related to U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C [Neurospora
crassa]
gi|28922972|gb|EAA32191.1| predicted protein [Neurospora crassa OR74A]
Length = 216
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|440639746|gb|ELR09665.1| hypothetical protein GMDG_04151 [Geomyces destructans 20631-21]
Length = 222
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNTGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|342887514|gb|EGU86996.1| hypothetical protein FOXB_02390 [Fusarium oxysporum Fo5176]
Length = 196
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|353234540|emb|CCA66564.1| related to lipoyltransferase [Piriformospora indica DSM 11827]
Length = 492
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS +VRK HN+G H +NVR YY + Q++IDQ
Sbjct: 1 MPKHYCDYCDVWLTHDSAAVRKAHNSGRNHLSNVREYYASLGHDKAQTIIDQ 52
>gi|171691891|ref|XP_001910870.1| hypothetical protein [Podospora anserina S mat+]
gi|170945894|emb|CAP72695.1| unnamed protein product [Podospora anserina S mat+]
Length = 218
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|336364679|gb|EGN93034.1| hypothetical protein SERLA73DRAFT_172391 [Serpula lacrymans var.
lacrymans S7.3]
Length = 200
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H +NVR YY + Q++IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLSNVRDYYASLGHDKAQNIIDQ 52
>gi|226289874|gb|EEH45358.1| hypothetical protein PADG_01508 [Paracoccidioides brasiliensis
Pb18]
Length = 229
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVID 51
>gi|358395598|gb|EHK44985.1| hypothetical protein TRIATDRAFT_88100 [Trichoderma atroviride IMI
206040]
Length = 194
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|402085871|gb|EJT80769.1| hypothetical protein GGTG_00763 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 211
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVIEYYQQIGHEKAQSVID 51
>gi|452844700|gb|EME46634.1| hypothetical protein DOTSEDRAFT_70596 [Dothistroma septosporum
NZE10]
Length = 199
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ Q++ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVID 51
>gi|347833154|emb|CCD48851.1| hypothetical protein [Botryotinia fuckeliana]
Length = 187
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|169606872|ref|XP_001796856.1| hypothetical protein SNOG_06486 [Phaeosphaeria nodorum SN15]
gi|160707098|gb|EAT86317.2| hypothetical protein SNOG_06486 [Phaeosphaeria nodorum SN15]
Length = 127
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV++YY+Q QTQ +I+
Sbjct: 17 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVIN 67
>gi|348689590|gb|EGZ29404.1| hypothetical protein PHYSODRAFT_476304 [Phytophthora sojae]
Length = 66
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MPRYYCDYCDTYLTHDS RKQHN G+KH+ NV+ YY+QF
Sbjct: 1 MPRYYCDYCDTYLTHDSVPGRKQHNRGWKHRENVKLYYEQF 41
>gi|389635077|ref|XP_003715191.1| hypothetical protein MGG_08209 [Magnaporthe oryzae 70-15]
gi|351647524|gb|EHA55384.1| hypothetical protein MGG_08209 [Magnaporthe oryzae 70-15]
gi|440468016|gb|ELQ37201.1| hypothetical protein OOU_Y34scaffold00610g38 [Magnaporthe oryzae
Y34]
gi|440487510|gb|ELQ67294.1| hypothetical protein OOW_P131scaffold00323g14 [Magnaporthe oryzae
P131]
Length = 218
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVIEYYQQIGHEKAQSVID 51
>gi|310793702|gb|EFQ29163.1| U1 zinc finger [Glomerella graminicola M1.001]
Length = 197
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|380478163|emb|CCF43756.1| glucose N-acetyltransferase 1 [Colletotrichum higginsianum]
Length = 197
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|358389547|gb|EHK27139.1| hypothetical protein TRIVIDRAFT_207688 [Trichoderma virens
Gv29-8]
Length = 194
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|452822887|gb|EME29902.1| U1 small nuclear ribonucleoprotein C [Galdieria sulphuraria]
Length = 126
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKE 56
M +YYCDYCD YLTHDSP+VRKQHN G +H+ N YY+QF + Q ID + +
Sbjct: 1 MGKYYCDYCDVYLTHDSPAVRKQHNDGNRHRMNFAEYYRQFIGESLQQQIDAVVYD 56
>gi|302913091|ref|XP_003050842.1| hypothetical protein NECHADRAFT_80502 [Nectria haematococca mpVI
77-13-4]
gi|363805522|sp|C7YRT4.1|RU1C_NECH7 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|256731780|gb|EEU45129.1| hypothetical protein NECHADRAFT_80502 [Nectria haematococca mpVI
77-13-4]
Length = 204
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|408398045|gb|EKJ77181.1| hypothetical protein FPSE_02631 [Fusarium pseudograminearum
CS3096]
Length = 196
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YY+Q ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYEQIGHEKAQSVID 51
>gi|340522372|gb|EGR52605.1| predicted protein [Trichoderma reesei QM6a]
Length = 218
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 51
>gi|189191362|ref|XP_001932020.1| glucose N-acetyltransferase 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973626|gb|EDU41125.1| glucose N-acetyltransferase 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 371
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV++YY+Q QTQ +I+
Sbjct: 164 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVIN 214
>gi|393228924|gb|EJD36557.1| zf-U1-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 202
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YCDYCD +LTHDS SVRK HN+G H +NVR YY + Q++IDQ
Sbjct: 1 MPKHYCDYCDVFLTHDSTSVRKAHNSGRNHLSNVRDYYASLGHDKAQNIIDQ 52
>gi|443898320|dbj|GAC75657.1| hypothetical protein PANT_16d00086 [Pseudozyma antarctica T-34]
Length = 227
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M ++YCDYCD +LTHDS SVRK HN+G H NVR YYQ + +Q Q +ID E+
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLDPEQIQQVIDTLAHEY 57
>gi|330927242|ref|XP_003301797.1| hypothetical protein PTT_13388 [Pyrenophora teres f. teres 0-1]
gi|311323215|gb|EFQ90104.1| hypothetical protein PTT_13388 [Pyrenophora teres f. teres 0-1]
Length = 573
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV++YY+Q QTQ +I+
Sbjct: 371 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVIN 421
>gi|298708559|emb|CBJ30644.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 180
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQ 47
MPRYYCDYC TYLTHDS R+QHN G+KH NV+ +Y+QF E+ Q
Sbjct: 1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLEKFVQ 47
>gi|343426493|emb|CBQ70023.1| related to U1 small nuclear ribonucleoprotein C [Sporisorium
reilianum SRZ2]
Length = 220
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M ++YCDYCD +LTHDS SVRK HN+G H NVR YYQ + +Q Q ++D +E+
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLDPEQIQQVLDTLAQEY 57
>gi|396465764|ref|XP_003837490.1| hypothetical protein LEMA_P037240.1 [Leptosphaeria maculans JN3]
gi|312214048|emb|CBX94050.1| hypothetical protein LEMA_P037240.1 [Leptosphaeria maculans JN3]
Length = 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV++YY+Q QTQ +I+
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVIN 51
>gi|358054954|dbj|GAA99021.1| hypothetical protein E5Q_05710 [Mixia osmundae IAM 14324]
Length = 511
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MPR+YCDYCD +LTHDS SVR HN+G H NV+ YY Q++ID+
Sbjct: 1 MPRHYCDYCDIFLTHDSRSVRHAHNSGRNHLTNVKDYYASLGTDDIQTMIDK 52
>gi|451855034|gb|EMD68326.1| hypothetical protein COCSADRAFT_22776 [Cochliobolus sativus
ND90Pr]
Length = 207
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV++YY+Q QTQ +I+
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVIN 51
>gi|452001211|gb|EMD93671.1| hypothetical protein COCHEDRAFT_1171680 [Cochliobolus
heterostrophus C5]
Length = 207
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+++CDYCD YLTHDS SVRK HN G H NV++YY+Q QTQ +I+
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVIN 51
>gi|388856036|emb|CCF50413.1| related to U1 small nuclear ribonucleoprotein C [Ustilago hordei]
Length = 230
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M ++YCDYCD +LTHDS SVRK HN+G H NVR YYQ + Q Q ++D KE+
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQSLDPDQIQQVLDTLAKEY 57
>gi|395330397|gb|EJF62780.1| zf-U1-domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 174
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
++YCDYCD +LTHDS SVRK HN+G H ANVR YY + QS+IDQ
Sbjct: 1 KHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQ 50
>gi|331250853|ref|XP_003338031.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|363805506|sp|E3LAN7.1|RU1C1_PUCGT RecName: Full=U1 small nuclear ribonucleoprotein C-1; Short=U1
snRNP C-1; Short=U1-C-1; Short=U1C-1
gi|309317021|gb|EFP93612.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 190
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIK 55
M +YYCDYCD +L +SPSVRK HN+G H NVR YY + QS ID+ +
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQSYIDEITR 55
>gi|71023051|ref|XP_761755.1| hypothetical protein UM05608.1 [Ustilago maydis 521]
gi|74699535|sp|Q4P2Q5.1|RU1C_USTMA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|46101241|gb|EAK86474.1| hypothetical protein UM05608.1 [Ustilago maydis 521]
Length = 221
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
M ++YCDYCD +LTHDS SVRK HN+G H NVR YYQ E + Q ++D +E+
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLEPECIQQVLDTLAQEY 57
>gi|331232035|ref|XP_003328680.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|363805508|sp|E3KIY6.1|RU1C2_PUCGT RecName: Full=U1 small nuclear ribonucleoprotein C-2; Short=U1
snRNP C-2; Short=U1-C-2; Short=U1C-2
gi|309307670|gb|EFP84261.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 188
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIK 55
M +YYCDYCD +L +SPSVRK HN+G H NVR YY + QS ID+ +
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQSYIDEITR 55
>gi|164659072|ref|XP_001730661.1| hypothetical protein MGL_2457 [Malassezia globosa CBS 7966]
gi|159104557|gb|EDP43447.1| hypothetical protein MGL_2457 [Malassezia globosa CBS 7966]
Length = 166
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
M ++YCDYCD +LTHDS SVRK HN G H NVR YY + Q++ D ++E
Sbjct: 1 MGKHYCDYCDVFLTHDSTSVRKAHNCGRNHLQNVRDYYASISPYEMQAIADSILRE---- 56
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPV-LPTPVMPMTGSAPLVPG--MRPP 105
+Q+ G L+A P+L LP P + G AP + G MRPP
Sbjct: 57 ---YQKRGLPPPMELVA--PQLAYRLPPPSLMPNGRAPFMGGAAMRPP 99
>gi|320591751|gb|EFX04190.1| u1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 275
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+ CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID + +
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 58
Query: 61 TAA 63
A
Sbjct: 59 GQA 61
>gi|297286640|ref|XP_001101734.2| PREDICTED: hypothetical protein LOC712667 [Macaca mulatta]
Length = 160
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 31/125 (24%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++ CD+C+TYLTH PSV H +G KHK NV+ YYQ++ EQQ +SL D+ +
Sbjct: 1 MPKFCCDFCNTYLTHACPSVGTYHCSGRKHKENVKDYYQKWMEQQARSLADR------TK 54
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSA 120
TA +Q+ R P P SAPL G + +P P P + S+
Sbjct: 55 TA--------------SQQGRTP-------PTLFSAPLPAG----AMIQPLPXPGSFCSS 89
Query: 121 PGMPP 125
PGM P
Sbjct: 90 PGMMP 94
>gi|290991023|ref|XP_002678135.1| predicted protein [Naegleria gruberi]
gi|284091746|gb|EFC45391.1| predicted protein [Naegleria gruberi]
Length = 226
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLI 50
MP++YCDYCD +LT+DS SVRK H G++HK NVR+++ QF T +L+
Sbjct: 1 MPKFYCDYCDVFLTNDSISVRKLHCKGWRHKTNVRAFFAQFVGDPTSALM 50
>gi|328850558|gb|EGF99721.1| hypothetical protein MELLADRAFT_118240 [Melampsora
larici-populina 98AG31]
Length = 210
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M +YYCDYCD +L +SPSVRK HN+G H NVR YY + Q++ID+ R+ E
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQNIIDEITRMYESG 60
Query: 59 GQTAA 63
G A
Sbjct: 61 GSNPA 65
>gi|363805529|sp|D3B3B7.1|RU1C_POLPA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|281209647|gb|EFA83815.1| C2H2-type zinc finger-containing protein [Polysphondylium
pallidum PN500]
Length = 141
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQR 53
MP+YYC+YCD YLTHDSPSVRK H G H+ V YY+QFE + +S + Q+
Sbjct: 1 MPKYYCEYCDKYLTHDSPSVRKSHTIGKVHQQAVTLYYKQFEAEWFKSQMQQK 53
>gi|326431941|gb|EGD77511.1| hypothetical protein PTSG_08609 [Salpingoeca sp. ATCC 50818]
Length = 299
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQ 44
MPRYYCDYCDT+LTHDSPSVRK HN G KHK V YY+ + ++
Sbjct: 1 MPRYYCDYCDTFLTHDSPSVRKTHNTGRKHKDAVIHYYRTWLDE 44
>gi|328857018|gb|EGG06136.1| hypothetical protein MELLADRAFT_71940 [Melampsora larici-populina
98AG31]
Length = 210
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
M +YYCDYCD +L +SPSVRK HN+G H NVR YY + Q++ID+
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQNIIDE 52
>gi|159125570|gb|EDP50687.1| U1 small nuclear ribonucleoprotein C, putative [Aspergillus
fumigatus A1163]
Length = 238
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 34/46 (73%)
Query: 6 CDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
CDYCD YLTHDS SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 28 CDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVID 73
>gi|367023837|ref|XP_003661203.1| hypothetical protein MYCTH_2048966, partial [Myceliophthora
thermophila ATCC 42464]
gi|347008471|gb|AEO55958.1| hypothetical protein MYCTH_2048966, partial [Myceliophthora
thermophila ATCC 42464]
Length = 55
Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 5 YCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
+CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 FCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 47
>gi|19112176|ref|NP_595384.1| U1 snRNP-associated protein Usp103 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74625357|sp|Q9P794.1|RU1C_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|7573202|emb|CAB87371.1| U1 snRNP-associated protein Usp103 (predicted)
[Schizosaccharomyces pombe]
Length = 182
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQR 53
MPRY CDYC +LTHDS SVRK HNAG H NV+ YY + +++ Q +++R
Sbjct: 1 MPRYLCDYCQVWLTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQEEAQKQLEER 53
>gi|134055442|emb|CAK43957.1| unnamed protein product [Aspergillus niger]
Length = 194
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+Y DYCD YLTHDS SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 1 MPKY-NDYCDVYLTHDSMSVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVID 50
>gi|367036637|ref|XP_003648699.1| hypothetical protein THITE_2033836, partial [Thielavia terrestris
NRRL 8126]
gi|346995960|gb|AEO62363.1| hypothetical protein THITE_2033836, partial [Thielavia terrestris
NRRL 8126]
Length = 55
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 5 YCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
+CDYCD YLTHDS SVRK HN G H NV YYQQ ++ QS+ID
Sbjct: 1 FCDYCDVYLTHDSMSVRKAHNNGRNHLRNVVDYYQQIGHEKAQSVID 47
>gi|406864024|gb|EKD17070.1| u1 small nuclear ribonucleoprotein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 185
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 6 CDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 4 CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 49
>gi|255947242|ref|XP_002564388.1| Pc22g03450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591405|emb|CAP97633.1| Pc22g03450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 185
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+Y DYCD YLTHDS SVRK HN+G H NV YYQQ +++ QS+ID
Sbjct: 1 MPKY-NDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGQEKAQSVID 50
>gi|322710172|gb|EFZ01747.1| U1 small nuclear ribonucleoprotein C, putative [Metarhizium
anisopliae ARSEF 23]
Length = 193
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+ CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGKNHLRNVVDYYQQIGHEKAQSVID 49
>gi|121708613|ref|XP_001272188.1| U1 small nuclear ribonucleoprotein C, putative [Aspergillus
clavatus NRRL 1]
gi|119400336|gb|EAW10762.1| U1 small nuclear ribonucleoprotein C, putative [Aspergillus
clavatus NRRL 1]
Length = 218
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 4 YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAA 63
+ DYCD YLTHDS SVRK HN+G H NV YYQQ +++ QS+ID + + A
Sbjct: 3 WIGDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAAEGQA 62
>gi|317138174|ref|XP_003189021.1| hypothetical protein AOR_1_392184 [Aspergillus oryzae RIB40]
Length = 366
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 7 DYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
DYCD YLTHDS SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 154 DYCDVYLTHDSMSVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVID 198
>gi|154298100|ref|XP_001549474.1| hypothetical protein BC1G_12015 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+ CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 49
>gi|156044630|ref|XP_001588871.1| hypothetical protein SS1G_10419 [Sclerotinia sclerotiorum 1980]
gi|363805531|sp|A7EYK3.1|RU1C_SCLS1 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|154694807|gb|EDN94545.1| hypothetical protein SS1G_10419 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 181
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
MP+ CDYCD YLTHDS SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 49
>gi|350638399|gb|EHA26755.1| hypothetical protein ASPNIDRAFT_35817 [Aspergillus niger ATCC 1015]
Length = 589
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 7 DYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
DYCD YLTHDS SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 375 DYCDVYLTHDSMSVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVID 419
>gi|240281974|gb|EER45477.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325088113|gb|EGC41423.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 242
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 33/49 (67%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
Y DYCD YLTHDS SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 2 NYLGDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVID 50
>gi|363805510|sp|C0NN85.1|RU1C_AJECG RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|225559050|gb|EEH07333.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 242
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 33/49 (67%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
Y DYCD YLTHDS SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 2 NYLGDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVID 50
>gi|392355380|ref|XP_003752022.1| PREDICTED: uncharacterized protein LOC100910029 [Rattus
norvegicus]
Length = 203
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKE 56
MP++YCDYCD YLT DSP+ R++ + KHK VR YQ+ E+Q QSLID+ E
Sbjct: 1 MPKFYCDYCDKYLTLDSPTERQKCCSERKHK--VRDSYQKRTEEQAQSLIDKTTLE 54
>gi|388580103|gb|EIM20420.1| zf-U1-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 102
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH 57
++YCDYCD +LTH+S +VRK HN+G H NV+ YY + Q +ID+ + H
Sbjct: 5 KFYCDYCDVFLTHNSAAVRKAHNSGRNHLINVKDYYASLGHDKAQFIIDEICRIH 59
>gi|392338452|ref|XP_003753540.1| PREDICTED: uncharacterized LOC100910029 [Rattus norvegicus]
Length = 259
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKE 56
MP++YCDYCD YLT DSP+ R++ + KHK VR YQ+ E+Q QSLID+ E
Sbjct: 1 MPKFYCDYCDKYLTLDSPTERQKCCSERKHK--VRDSYQKRTEEQAQSLIDKTTLE 54
>gi|295661015|ref|XP_002791063.1| hypothetical protein PAAG_06974 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280990|gb|EEH36556.1| hypothetical protein PAAG_06974 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 508
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 7 DYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
DYCD YLTHDS SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 264 DYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVID 308
>gi|400598594|gb|EJP66303.1| U1 small nuclear ribonucleoprotein [Beauveria bassiana ARSEF
2860]
Length = 219
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MP+++CDYCD YLTHDS SVRK HN+G H NV YYQ+
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQRL 41
>gi|47028269|gb|AAT09067.1| U1 small nuclear ribonucleoprotein [Bigelowiella natans]
Length = 128
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
M R+YCDYCD YLTHDS + RKQH G +H+ NVR YY +F
Sbjct: 1 MGRFYCDYCDIYLTHDSQAGRKQHMHGRRHQENVRQYYSEF 41
>gi|414873159|tpg|DAA51716.1| TPA: hypothetical protein ZEAMMB73_769664 [Zea mays]
Length = 431
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 12/54 (22%)
Query: 23 QHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLL 76
+HNAGYKHK EQQTQ +IDQ IKEHLGQ AAF Q GA +NQHLL
Sbjct: 279 KHNAGYKHK-----------EQQTQGVIDQIIKEHLGQVAAF-QAGAQFNQHLL 320
>gi|443912139|gb|ELU35816.1| zf-U1 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 117
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 18/70 (25%)
Query: 1 MPRYYCDYCDTYLTHDSPS------------------VRKQHNAGYKHKANVRSYYQQFE 42
MP++YCDYCD +LTHDS S VRK HN+G H ANV+ YY
Sbjct: 1 MPKHYCDYCDVFLTHDSTSGMKYIHVLLGLISNRIHLVRKAHNSGRNHLANVQDYYASLG 60
Query: 43 EQQTQSLIDQ 52
+ Q++IDQ
Sbjct: 61 HDKAQNIIDQ 70
>gi|168055789|ref|XP_001779906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668719|gb|EDQ55321.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 75/127 (59%), Gaps = 17/127 (13%)
Query: 18 PSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLG---QTAAFQQVGAAYNQH 74
PSVRKQH AGYKHKANVR YYQQFEEQQTQSLIDQ++KEHLG A QQVG A H
Sbjct: 3 PSVRKQHCAGYKHKANVRQYYQQFEEQQTQSLIDQKVKEHLGQTAAALAQQQVGGAVYSH 62
Query: 75 LLAQRPRLPVLPTPVMPMTGSA----PLVPGMRPPVLPRPGPSPPGYVSA---PGMPPMM 127
L + PM S P++ +RPPVLP P GY S PP++
Sbjct: 63 LAG-------MGGGYKPMAASGLLRPPMLAAVRPPVLPPPSGPASGYGSGALPSYRPPVV 115
Query: 128 APPGAPS 134
PPG+ S
Sbjct: 116 QPPGSGS 122
>gi|363805512|sp|F4NYQ2.1|RU1C_BATDJ RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|328772028|gb|EGF82067.1| hypothetical protein BATDEDRAFT_23335 [Batrachochytrium
dendrobatidis JAM81]
Length = 228
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 7 DYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ-QFEEQQTQSLIDQRIKEHL 58
DYCD +LTHDS SVRK HN G+KHK V YY + + + QS+ID K ++
Sbjct: 14 DYCDIFLTHDSASVRKAHNTGWKHKMQVEHYYNAEVDPAKIQSVIDNVTKAYI 66
>gi|403221525|dbj|BAM39658.1| U1 snRNP-specific protein C [Theileria orientalis strain Shintoku]
Length = 160
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YC+YC YLTH SP+ RKQH+ G KH YYQ+ ++E Q
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHINAKVDYYQKL------------VRERFFQ 48
Query: 61 TAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPP 115
F P++P+ P PM G P PG +P ++P +PP
Sbjct: 49 PPPFAN-------------PQMPLFPG--FPMMGLMPGFPGFQPGMVPSMDGNPP 88
>gi|260947742|ref|XP_002618168.1| hypothetical protein CLUG_01627 [Clavispora lusitaniae ATCC
42720]
gi|238848040|gb|EEQ37504.1| hypothetical protein CLUG_01627 [Clavispora lusitaniae ATCC
42720]
Length = 135
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQ 47
MP+YYCDYC +YLTHD SVRK H AG K ++R Y +EE+ Q
Sbjct: 1 MPKYYCDYCKSYLTHDKMSVRKSHLAG---KNHIRKYCLYYEEKAKQ 44
>gi|84997764|ref|XP_953603.1| RNA-binding protein (U1 snRNP-like) [Theileria annulata]
gi|74954025|sp|Q4UJ14.1|RU1C_THEAN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|65304600|emb|CAI72925.1| RNA-binding protein (U1 snRNP-like), putative [Theileria
annulata]
Length = 151
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP++YC+YC YLTH SP+ RKQH+ G KH + Y+Q+ +Q
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHISAKVEYFQRLVREQ 45
>gi|345308972|ref|XP_001509353.2| PREDICTED: hypothetical protein LOC100078281, partial
[Ornithorhynchus anatinus]
Length = 302
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 18 PSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ-----------RIKEHLGQTAAFQQ 66
PSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ R+K +G+ A +
Sbjct: 1 PSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTKKKCPGFGTIRLKTGVGEVEAKKN 60
Query: 67 VGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGY-VSAP-GMP 124
+ + + + P + GS+ G PP P S P Y SAP G
Sbjct: 61 L-------TMPEDGCISTRKNPSHAVLGSSSW-RGDDPPAPESPRSSSPRYDASAPYGGS 112
Query: 125 PMMAPPGAPSAPGQLNG 141
P A G+PS+ G
Sbjct: 113 PYDADDGSPSSWNDARG 129
>gi|320165818|gb|EFW42717.1| hypothetical protein CAOG_07849 [Capsaspora owczarzaki ATCC
30864]
Length = 251
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MPRY+C YC +LTHDS SVRK H +G KHK V+ +++ +
Sbjct: 30 MPRYFCHYCQAHLTHDSSSVRKTHISGRKHKEAVKLFFENY 70
>gi|118347669|ref|XP_001007311.1| U1 zinc finger family protein [Tetrahymena thermophila]
gi|89289078|gb|EAR87066.1| U1 zinc finger family protein [Tetrahymena thermophila SB210]
Length = 626
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YC+YC YLTH SPS R QH G KH N YY+Q E + D++ + GQ
Sbjct: 384 MPKFYCEYCGIYLTHSSPSGRSQHAKGRKHINNRIEYYKQVIEDLIKENQDKQKQMQSGQ 443
Query: 61 TAA 63
+ +
Sbjct: 444 SMS 446
>gi|399216245|emb|CCF72933.1| unnamed protein product [Babesia microti strain RI]
Length = 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP++YC+YC+ YLTH SP+ RKQH+ G KH YYQ ++
Sbjct: 1 MPKFYCEYCNIYLTHSSPAGRKQHSQGKKHINAKIEYYQNLIRER 45
>gi|71034095|ref|XP_766689.1| hypothetical protein [Theileria parva strain Muguga]
gi|122052875|sp|Q4N6K2.1|RU1C_THEPA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|68353646|gb|EAN34406.1| hypothetical protein TP01_1168 [Theileria parva]
Length = 141
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP++YC+YC YLTH SP+ RKQH+ G KH + Y+Q+ +Q
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHISAKVEYFQRLVREQ 45
>gi|66356784|ref|XP_625570.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46226567|gb|EAK87555.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 198
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ 40
MP++YCDYCD YLTH S + RKQHN G KH N +Y+
Sbjct: 1 MPKFYCDYCDIYLTHSSTNGRKQHNLGRKHINNKIDHYKN 40
>gi|156088117|ref|XP_001611465.1| U1 zinc finger family protein [Babesia bovis]
gi|154798719|gb|EDO07897.1| U1 zinc finger family protein [Babesia bovis]
Length = 128
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP++YC+YC YLTH SP+ RKQH+ G KH + YYQ+ ++EH Q
Sbjct: 1 MPKFYCEYCGIYLTHSSPAGRKQHSMGRKHISMKVEYYQRL------------VREHFFQ 48
Query: 61 TAAFQQVGA 69
+ GA
Sbjct: 49 PPPYTLSGA 57
>gi|237842205|ref|XP_002370400.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211968064|gb|EEB03260.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221502856|gb|EEE28570.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 215
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEE-------QQTQSLIDQR 53
MP+YYC+YCD YLTH SP+ R+QH G KH Y+Q QQ S + QR
Sbjct: 1 MPKYYCEYCDIYLTHSSPAGRRQHATGRKHINQKIEYFQNLIREPDFMPPQQLDSTVVQR 60
>gi|428672006|gb|EKX72921.1| conserved hypothetical protein [Babesia equi]
Length = 135
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP++YC+YC YLTH SP+ RKQH+ G KH YYQ+ ++
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHINAKVDYYQKLVRER 45
>gi|320580751|gb|EFW94973.1| U1 snRNP U1C (U1-C), putative [Ogataea parapolymorpha DL-1]
Length = 125
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQ----QTQSL 49
MP+YYCDYC +YLTHDS SVRK H G H YY++ + +TQ L
Sbjct: 1 MPKYYCDYCKSYLTHDSLSVRKSHLQGRNHLTFYCEYYEEIARENGLLETQEL 53
>gi|401403179|ref|XP_003881430.1| putative U1 small nuclear ribonucleoprotein [Neospora caninum
Liverpool]
gi|325115842|emb|CBZ51397.1| putative U1 small nuclear ribonucleoprotein [Neospora caninum
Liverpool]
Length = 234
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MP+YYC+YCD YLTH SP+ R+QH G KH Y+Q
Sbjct: 1 MPKYYCEYCDIYLTHSSPAGRRQHATGRKHINQKIEYFQNL 41
>gi|403216485|emb|CCK70982.1| hypothetical protein KNAG_0F03200 [Kazachstania naganishii CBS
8797]
Length = 207
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYY--QQFEEQQTQSLIDQ-RIKEH 57
M RYYC+YC +YLTHD+ SVRK H G H V YY +Q E+ +S + + K
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLVGKNHLRVVADYYRNKQLEQDGKRSRGRRGKTKRT 60
Query: 58 LGQTAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPG 101
G T + G+ + + R+P L P+ G + L G
Sbjct: 61 AGATEVKIEPGSLLTRREKRAKRRVPSL----YPLAGLSSLYRG 100
>gi|145509180|ref|XP_001440534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407751|emb|CAK73137.1| unnamed protein product [Paramecium tetraurelia]
Length = 132
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YC+YC YLTH SPS RKQH+ G KH + YY+ L+DQ
Sbjct: 1 MPKFYCEYCGIYLTHSSPSGRKQHSLGKKHISAREDYYRAV----MSDLVDQ 48
>gi|45184966|ref|NP_982684.1| AAR142Cp [Ashbya gossypii ATCC 10895]
gi|44980575|gb|AAS50508.1| AAR142Cp [Ashbya gossypii ATCC 10895]
gi|374105884|gb|AEY94795.1| FAAR142Cp [Ashbya gossypii FDAG1]
Length = 212
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 27/47 (57%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQ 47
M RYYCDYC YLTHDS SVRK H G H YY +QQ +
Sbjct: 1 MARYYCDYCHAYLTHDSLSVRKSHLIGKNHIRLTADYYYNKAQQQAK 47
>gi|145535842|ref|XP_001453654.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421376|emb|CAK86257.1| unnamed protein product [Paramecium tetraurelia]
Length = 132
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
MP++YC+YC YLTH SPS RKQH+ G KH + YY+ L+DQ
Sbjct: 1 MPKFYCEYCGIYLTHSSPSGRKQHSLGKKHISAREDYYRAV----MSDLVDQ 48
>gi|83273883|ref|XP_729593.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|74882724|sp|Q7RNM5.1|RU1C_PLAYO RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|23487848|gb|EAA21158.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 201
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP+YYC+YCD YLTH SP R+QHN G KH + Y+Q ++
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHNQGRKHISAKIEYFQNLLREE 45
>gi|70943469|ref|XP_741777.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|74976169|sp|Q4XRM7.1|RU1C_PLACH RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|56520371|emb|CAH80435.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 192
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP+YYC+YCD YLTH SP R+QHN G KH + Y+Q ++
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHNQGRKHISAKIEYFQNLLREE 45
>gi|68071759|ref|XP_677793.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|74983065|sp|Q4YBG7.1|RU1C_PLABA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|56498044|emb|CAI04780.1| conserved hypothetical protein [Plasmodium berghei]
Length = 197
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP+YYC+YCD YLTH SP R+QHN G KH + Y+Q ++
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHNQGRKHISAKIEYFQNLLREE 45
>gi|365990327|ref|XP_003671993.1| hypothetical protein NDAI_0I01810 [Naumovozyma dairenensis CBS
421]
gi|343770767|emb|CCD26750.1| hypothetical protein NDAI_0I01810 [Naumovozyma dairenensis CBS
421]
Length = 275
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEH--L 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ QQ + H
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLVGKNHIRITADYYRNKNVQQYTKCTHRDRSRHNAK 60
Query: 59 GQTAAFQQVGAAYNQHLLAQRPRLPVLPTPVMP 91
G+T + + L + RL P P++
Sbjct: 61 GKTQSHHRSKITKVSDELDELNRLKKTPKPLLK 93
>gi|448517199|ref|XP_003867736.1| hypothetical protein CORT_0B05900 [Candida orthopsilosis Co
90-125]
gi|380352075|emb|CCG22299.1| hypothetical protein CORT_0B05900 [Candida orthopsilosis]
Length = 146
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQT 46
MP+YYCDYC +YLTHD+ SVRK H G KH Y +F+ ++T
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLMG-KHHIKYYCDYYEFKAKET 45
>gi|156102995|ref|XP_001617190.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|363805528|sp|A5JZQ2.1|RU1C_PLAVS RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|148806064|gb|EDL47463.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 240
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP+YYC+YCD YLTH SP R+QH G KH + Y+Q ++
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIQGRKHISAKIEYFQNLLREE 45
>gi|363750406|ref|XP_003645420.1| hypothetical protein Ecym_3094 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889054|gb|AET38603.1| Hypothetical protein Ecym_3094 [Eremothecium cymbalariae
DBVPG#7215]
Length = 255
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 26/45 (57%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
M RYYCDYC +YLTHD+ SVRK H G H YY QQ
Sbjct: 1 MARYYCDYCHSYLTHDTLSVRKSHLIGKNHIRLTADYYYNKANQQ 45
>gi|300123751|emb|CBK25023.2| unnamed protein product [Blastocystis hominis]
Length = 59
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQ 44
MPRYYCDYC +Y+ +DS RK+H G KH+ V +Y++ E
Sbjct: 1 MPRYYCDYCKSYIKNDSARSRKEHIRGAKHRECVVEHYKKVFEH 44
>gi|448118568|ref|XP_004203531.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
gi|448120973|ref|XP_004204114.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
gi|359384399|emb|CCE79103.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
gi|359384982|emb|CCE78517.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
Length = 121
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
MP+YYCDYC +YLTHD+ SVRK H G H +YY+
Sbjct: 1 MPKYYCDYCKSYLTHDTISVRKSHLTGKNHIRYYCNYYE 39
>gi|322698311|gb|EFY90082.1| U1 small nuclear ribonucleoprotein C, putative [Metarhizium
acridum CQMa 102]
Length = 244
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 7 DYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ 40
DYCD YLTHDS SVRK HN+G H NV YYQ+
Sbjct: 28 DYCDVYLTHDSMSVRKAHNSGKNHLRNVVDYYQR 61
>gi|149245042|ref|XP_001527055.1| hypothetical protein LELG_01884 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449449|gb|EDK43705.1| hypothetical protein LELG_01884 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 185
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQT 46
MP+YYCDYC +YLTHD+ SVRK H G H YY +F+ ++T
Sbjct: 1 MPKYYCDYCKSYLTHDTLSVRKSHLMGKNHIKYYCDYY-EFKAKET 45
>gi|323332385|gb|EGA73794.1| Yhc1p [Saccharomyces cerevisiae AWRI796]
Length = 223
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVTCLSNKEKRHIMHVKKM 92
>gi|323347372|gb|EGA81644.1| Yhc1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVXCLSNKEKRHIMHVKKM 92
>gi|365764117|gb|EHN05642.1| Yhc1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVACLSNKEKRHIMHVKKM 92
>gi|389586198|dbj|GAB68927.1| hypothetical protein PCYB_143550, partial [Plasmodium cynomolgi
strain B]
Length = 249
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP+YYC+YCD YLTH SP R+QH G KH + Y+Q ++
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIQGRKHISAKIEYFQNLLREE 45
>gi|259148279|emb|CAY81526.1| Yhc1p [Saccharomyces cerevisiae EC1118]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVACLSNKEKRHIMHVKKM 92
>gi|6323329|ref|NP_013401.1| Yhc1p [Saccharomyces cerevisiae S288c]
gi|3024590|sp|Q05900.1|RU1C_YEAST RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|596051|gb|AAB67343.1| Ylr298cp [Saccharomyces cerevisiae]
gi|51012973|gb|AAT92780.1| YLR298C [Saccharomyces cerevisiae]
gi|151941002|gb|EDN59383.1| U1-C [Saccharomyces cerevisiae YJM789]
gi|190405354|gb|EDV08621.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256269830|gb|EEU05090.1| Yhc1p [Saccharomyces cerevisiae JAY291]
gi|285813712|tpg|DAA09608.1| TPA: Yhc1p [Saccharomyces cerevisiae S288c]
gi|392297802|gb|EIW08901.1| Yhc1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVTCLSNKEKRHIMHVKKM 92
>gi|207342864|gb|EDZ70497.1| YLR298Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVTCLSNKEKRHIMHVKKM 92
>gi|323336351|gb|EGA77619.1| Yhc1p [Saccharomyces cerevisiae Vin13]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVXCLSNKEKRHIMHVKKM 92
>gi|323303829|gb|EGA57612.1| Yhc1p [Saccharomyces cerevisiae FostersB]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVTCLSNKEKRHIMHVKKM 92
>gi|254582184|ref|XP_002497077.1| ZYRO0D14894p [Zygosaccharomyces rouxii]
gi|238939969|emb|CAR28144.1| ZYRO0D14894p [Zygosaccharomyces rouxii]
Length = 202
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + QS R+ + G+
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLIGKNHLRITADYYRN--KGKKQSRFFNRVSKKYGK 58
Query: 61 TAAFQQVG 68
+V
Sbjct: 59 RTEETKVS 66
>gi|323307947|gb|EGA61204.1| Yhc1p [Saccharomyces cerevisiae FostersO]
Length = 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVTCLSNKEKRHIMHVKKM 92
>gi|126137427|ref|XP_001385237.1| hypothetical protein PICST_32313 [Scheffersomyces stipitis CBS
6054]
gi|126092459|gb|ABN67208.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 144
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
MP+YYCDYC++YLTHD+ SVRK H G H +YY+
Sbjct: 1 MPKYYCDYCNSYLTHDTMSVRKSHLIGRNHIKYYCTYYE 39
>gi|170092331|ref|XP_001877387.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647246|gb|EDR11490.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 365
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 26/128 (20%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANV----RSYYQQFEEQQTQSLIDQR--IKE 56
RY+C YC+ Y+ D+PS R+QH G +HK NV R Y+ E+Q+ ++R +
Sbjct: 10 RYFCKYCEIYIADDAPS-RQQHENGLRHKGNVERFIRGIYKSGEKQKKDLEEEKREMARV 68
Query: 57 HLGQTAAF-QQVGAAYNQHLLAQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPP 115
AAF Q VGA + PT P T AP P LP+P
Sbjct: 69 ERAANAAFAQDVGAGIAK------------PTSAAPSTSKAPSKP------LPKPSNPFA 110
Query: 116 GYVSAPGM 123
Y +A +
Sbjct: 111 NYSTAESL 118
>gi|221061187|ref|XP_002262163.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
gi|363805527|sp|B3LC82.1|RU1C_PLAKH RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|193811313|emb|CAQ42041.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
Length = 228
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP+YYC+YCD YLTH SP R+QH G KH + Y+Q ++
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHVQGRKHISAKIEYFQNLLREE 45
>gi|349580002|dbj|GAA25163.1| K7_Yhc1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 231
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ--RIKEHL 58
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + +I++ + H+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDVINKHNHKRRHI 56
Query: 59 GQTAAFQQVGAAYNQHL----LAQRPRLPVLPTPVM 90
G+ ++ ++ N+ L L+ + + ++ M
Sbjct: 57 GKRGRKERENSSQNETLKVTCLSNKEKRHIMHVKKM 92
>gi|367016913|ref|XP_003682955.1| hypothetical protein TDEL_0G03770 [Torulaspora delbrueckii]
gi|359750618|emb|CCE93744.1| hypothetical protein TDEL_0G03770 [Torulaspora delbrueckii]
Length = 191
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
M RYYC+YC +YLTHD+ SVRK H G H V YY+ Q+
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLVGKNHLRIVADYYRNKAHQE 45
>gi|367005881|ref|XP_003687672.1| hypothetical protein TPHA_0K01040 [Tetrapisispora phaffii CBS
4417]
gi|357525977|emb|CCE65238.1| hypothetical protein TPHA_0K01040 [Tetrapisispora phaffii CBS
4417]
Length = 155
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
M RYYC YC++YLTHD+ SVR+ H G H V YY+
Sbjct: 1 MARYYCVYCNSYLTHDTSSVRRSHLVGKHHVKAVADYYR 39
>gi|363805515|sp|C4YIU5.1|RU1C_CANAW RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|238882392|gb|EEQ46030.1| hypothetical protein CAWG_04374 [Candida albicans WO-1]
Length = 150
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
MP+YYCDYC +YLTHD+ SVRK H G H YY+
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLQGRNHIKFYCDYYE 39
>gi|68489334|ref|XP_711508.1| hypothetical protein CaO19.12947 [Candida albicans SC5314]
gi|68489383|ref|XP_711484.1| hypothetical protein CaO19.5492 [Candida albicans SC5314]
gi|74584417|sp|Q59P44.1|RU1C_CANAL RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|46432789|gb|EAK92256.1| hypothetical protein CaO19.5492 [Candida albicans SC5314]
gi|46432815|gb|EAK92281.1| hypothetical protein CaO19.12947 [Candida albicans SC5314]
Length = 150
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
MP+YYCDYC +YLTHD+ SVRK H G H YY+
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLQGRNHIKFYCDYYE 39
>gi|344302819|gb|EGW33093.1| hypothetical protein SPAPADRAFT_137826 [Spathaspora passalidarum
NRRL Y-27907]
Length = 138
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
MP+YYCDYC +YLTHD+ SVRK H G H +YY+
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLMGKNHIKYYCNYYE 39
>gi|389741730|gb|EIM82918.1| hypothetical protein STEHIDRAFT_102376 [Stereum hirsutum FP-91666
SS1]
Length = 370
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKAN----VRSYYQQFEEQQTQSLIDQR 53
RY+C YCD Y+T D+PS R+QH G +H+ N VR+ Y+ E+++ + ++R
Sbjct: 10 RYFCKYCDIYITDDAPS-RQQHENGLRHQGNKERFVRNIYKTGEKRKKDAEEEKR 63
>gi|254568494|ref|XP_002491357.1| Component of the U1 snRNP complex required for pre-mRNA splicing
[Komagataella pastoris GS115]
gi|238031154|emb|CAY69077.1| Component of the U1 snRNP complex required for pre-mRNA splicing
[Komagataella pastoris GS115]
gi|328352129|emb|CCA38528.1| U1 small nuclear ribonucleoprotein C [Komagataella pastoris CBS
7435]
Length = 122
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQ 44
M +YYC+YC++YLTHDS SVRK H G H +R Y +EE+
Sbjct: 1 MAKYYCEYCNSYLTHDSLSVRKSHLIGRNH---LRKYCDYYEEK 41
>gi|123409329|ref|XP_001303388.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
gi|154421899|ref|XP_001583962.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
gi|121884764|gb|EAX90458.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
gi|121918207|gb|EAY22976.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
Length = 218
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
R YC YCD YL H+S R+ H G+KH A V YY +F
Sbjct: 5 RCYCPYCDVYLVHNSLRSRRDHLNGFKHLAAVSIYYHRF 43
>gi|291232342|ref|XP_002736116.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C-like,
partial [Saccoglossus kowalevskii]
Length = 107
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 18 PSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYN 72
PSVRK H G KHK NV+ YYQ++ E+Q Q+LIDQ TAAFQ A N
Sbjct: 1 PSVRKTHCQGRKHKENVKIYYQKWMEEQAQNLIDQT-------TAAFQAGKIAQN 48
>gi|255725110|ref|XP_002547484.1| hypothetical protein CTRG_01791 [Candida tropicalis MYA-3404]
gi|240135375|gb|EER34929.1| hypothetical protein CTRG_01791 [Candida tropicalis MYA-3404]
Length = 149
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
MP+YYCDYC +YLTHD+ SVRK H G H YY+
Sbjct: 1 MPKYYCDYCKSYLTHDTLSVRKSHLQGRNHIKLYCDYYE 39
>gi|209876129|ref|XP_002139507.1| U1 zinc finger domain-containing protein [Cryptosporidium muris
RN66]
gi|209555113|gb|EEA05158.1| U1 zinc finger domain-containing protein [Cryptosporidium muris
RN66]
Length = 136
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MP++YCDYCD YLTH S R+QH+ G KH N +Y+
Sbjct: 1 MPKFYCDYCDIYLTHSSTGGRRQHSLGRKHINNKIEFYRNL 41
>gi|403347521|gb|EJY73186.1| U1 zinc finger family protein [Oxytricha trifallax]
Length = 138
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MP +YC+YC +L H SP RKQH+ G KH+ N YY QF
Sbjct: 1 MPNFYCEYCGIFLKHSSPFGRKQHSRGKKHQFNKIEYYSQF 41
>gi|156840688|ref|XP_001643723.1| hypothetical protein Kpol_1009p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156114346|gb|EDO15865.1| hypothetical protein Kpol_1009p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 171
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
M RYYC+YC +YLTHD+ SVR+ H G H V YY+
Sbjct: 1 MVRYYCEYCHSYLTHDTKSVRRSHLVGKNHLKAVADYYR 39
>gi|241951652|ref|XP_002418548.1| U1 snRNP U1C (U1-C), putative; U1 snRNP complex, putative;
pre-mRNA splicing complex subunit, putative [Candida
dubliniensis CD36]
gi|223641887|emb|CAX43850.1| U1 snRNP U1C (U1-C), putative [Candida dubliniensis CD36]
Length = 157
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
MP+YYCDYC +YLTHD+ SVRK H G H YY+
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLQGRNHIKFYCDYYE 39
>gi|294878465|ref|XP_002768380.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
gi|239870748|gb|EER01098.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
Length = 126
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYY-QQFEEQ 44
MP+Y+C+YCD +L H S RKQH+ G KH N YY +Q +E+
Sbjct: 1 MPKYFCEYCDIFLAHSSFFGRKQHSTGRKHIQNKIDYYTEQMKEK 45
>gi|294885993|ref|XP_002771504.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
gi|239875208|gb|EER03320.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
Length = 125
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYY-QQFEEQ 44
MP+Y+C+YCD +L H S RKQH+ G KH N YY +Q +E+
Sbjct: 1 MPKYFCEYCDIFLAHSSFFGRKQHSTGRKHIQNKIDYYTEQMKEK 45
>gi|124512530|ref|XP_001349398.1| RNA-binding protein (U1 snRNP-like), putative [Plasmodium
falciparum 3D7]
gi|74815005|sp|Q8IAW3.1|RU1C_PLAF7 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|23499167|emb|CAD51247.1| RNA-binding protein (U1 snRNP-like), putative [Plasmodium
falciparum 3D7]
Length = 235
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 45
MP+YYC+YCD YLTH SP R+QH G KH + Y+Q ++
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIHGRKHISAKIEYFQNLLREE 45
>gi|444315251|ref|XP_004178283.1| hypothetical protein TBLA_0A09810 [Tetrapisispora blattae CBS
6284]
gi|387511322|emb|CCH58764.1| hypothetical protein TBLA_0A09810 [Tetrapisispora blattae CBS
6284]
Length = 249
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
M RYYC+YC +YLTHD+ SVR H G H V YY+
Sbjct: 1 MVRYYCEYCHSYLTHDTLSVRNSHLVGKNHIKMVADYYR 39
>gi|401624503|gb|EJS42559.1| yhc1p [Saccharomyces arboricola H-6]
Length = 239
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
M RYYC+YC +YLTHD+ SVRK H G H YY+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR 39
>gi|219118939|ref|XP_002180236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408493|gb|EEC48427.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 216
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQF 41
MPR++ DY +TYLTHDS + RKQ G+K + N + +Y+ +
Sbjct: 1 MPRFFDDYSNTYLTHDSSAGRKQQRRGWKFRENFKLHYETY 41
>gi|401840185|gb|EJT43090.1| YHC1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 231
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + S D + + H G+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYKN-KARDISSKRDHK-RHHKGK 58
Query: 61 TAAFQQVGAAYNQHL 75
++ N+ L
Sbjct: 59 RGRKERENTDANEKL 73
>gi|365759319|gb|EHN01113.1| Yhc1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 231
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
M RYYC+YC +YLTHD+ SVRK H G H YY+ + + S D + + H G+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYRN-KARDISSKRDHK-RHHKGK 58
Query: 61 TAAFQQVGAAYNQHL 75
++ N+ L
Sbjct: 59 RGRKERENTDANEKL 73
>gi|366992972|ref|XP_003676251.1| hypothetical protein NCAS_0D03090 [Naumovozyma castellii CBS
4309]
gi|342302117|emb|CCC69890.1| hypothetical protein NCAS_0D03090 [Naumovozyma castellii CBS
4309]
Length = 244
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
M RYYC+YC +YLTHD+ SVRK H G H YY+
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLIGKNHLRITADYYR 39
>gi|67482081|ref|XP_656390.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56473586|gb|EAL51005.1| hypothetical protein EHI_153250 [Entamoeba histolytica HM-1:IMSS]
gi|407037170|gb|EKE38531.1| U1 zinc finger protein [Entamoeba nuttalli P19]
gi|449705176|gb|EMD45279.1| putative U1 zinc finger protein [Entamoeba histolytica KU27]
Length = 96
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 PRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
RYYC+YC +L + RK+H G KHK + Y++QFE Q +ID
Sbjct: 4 KRYYCEYCQKHLVYGGTRSRKEHILGKKHKDKMVEYFKQFEANILQRMID 53
>gi|410074933|ref|XP_003955049.1| hypothetical protein KAFR_0A04790 [Kazachstania africana CBS
2517]
gi|372461631|emb|CCF55914.1| hypothetical protein KAFR_0A04790 [Kazachstania africana CBS
2517]
Length = 230
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQ 39
M RYYC+YC +YLTHD+ SVRK H G H YY+
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLIGKNHLKITADYYR 39
>gi|405957104|gb|EKC23338.1| U1 small nuclear ribonucleoprotein C [Crassostrea gigas]
Length = 171
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 14 THDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYN 72
+ + PSVRK H G KHK NVR YYQ++ E+Q Q L+D TAAF+ A N
Sbjct: 36 SDEYPSVRKTHCNGRKHKENVRLYYQKWLEEQVQKLVDD-------TTAAFKAGKIASN 87
>gi|255719816|ref|XP_002556188.1| KLTH0H07106p [Lachancea thermotolerans]
gi|238942154|emb|CAR30326.1| KLTH0H07106p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYY 38
MPR+ CDYC +YLTHD+PSVRK H G H YY
Sbjct: 1 MPRF-CDYCHSYLTHDTPSVRKSHLLGKNHVKLAADYY 37
>gi|384484141|gb|EIE76321.1| hypothetical protein RO3G_01025 [Rhizopus delemar RA 99-880]
Length = 151
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
MP+YYC SVRK HNAG H NVR+YY + + + Q++ID+ + +
Sbjct: 1 MPKYYC-----------ASVRKAHNAGKNHILNVRNYYAEISQDKAQAIIDEITRAYENA 49
Query: 61 TAAF 64
+A
Sbjct: 50 SAVL 53
>gi|358367824|dbj|GAA84442.1| cell wall protein, partial [Aspergillus kawachii IFO 4308]
Length = 675
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 82 LPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSAPGMPPMMAPPGAPSAPGQLNG 141
+P +PT +P GS+P P G SP G S P P PGAPS G
Sbjct: 472 VPAVPTVSVPTGGSSPSKPAQSGAPGSPSGVSPSGIPSVPSSPAQSGAPGAPSG-----G 526
Query: 142 FPRPPAVMNPTAVSGSAAPPASSSG-APSMATPQTYQANPT 181
P P + P++ + S AP A S G P+ + P+ A +
Sbjct: 527 VPAPSGGVVPSSPAQSGAPGAPSGGVVPTTSVPEGASAGAS 567
>gi|190897708|gb|ACE97367.1| expressed protein [Populus tremula]
gi|190897710|gb|ACE97368.1| expressed protein [Populus tremula]
gi|190897712|gb|ACE97369.1| expressed protein [Populus tremula]
gi|190897714|gb|ACE97370.1| expressed protein [Populus tremula]
gi|190897716|gb|ACE97371.1| expressed protein [Populus tremula]
gi|190897718|gb|ACE97372.1| expressed protein [Populus tremula]
gi|190897720|gb|ACE97373.1| expressed protein [Populus tremula]
gi|190897722|gb|ACE97374.1| expressed protein [Populus tremula]
gi|190897724|gb|ACE97375.1| expressed protein [Populus tremula]
gi|190897726|gb|ACE97376.1| expressed protein [Populus tremula]
gi|190897728|gb|ACE97377.1| expressed protein [Populus tremula]
gi|190897730|gb|ACE97378.1| expressed protein [Populus tremula]
gi|190897732|gb|ACE97379.1| expressed protein [Populus tremula]
gi|190897734|gb|ACE97380.1| expressed protein [Populus tremula]
gi|190897736|gb|ACE97381.1| expressed protein [Populus tremula]
gi|190897738|gb|ACE97382.1| expressed protein [Populus tremula]
gi|190897740|gb|ACE97383.1| expressed protein [Populus tremula]
gi|190897742|gb|ACE97384.1| expressed protein [Populus tremula]
gi|190897744|gb|ACE97385.1| expressed protein [Populus tremula]
gi|190897746|gb|ACE97386.1| expressed protein [Populus tremula]
gi|190897748|gb|ACE97387.1| expressed protein [Populus tremula]
gi|190897750|gb|ACE97388.1| expressed protein [Populus tremula]
gi|190897752|gb|ACE97389.1| expressed protein [Populus tremula]
gi|190897754|gb|ACE97390.1| expressed protein [Populus tremula]
Length = 58
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 82 LPVLPTPVMPMTGS-APLVPGMRPPVLPRPGPS 113
LPVLPTPVMPM G+ APL PGMRPPVLPRP P
Sbjct: 1 LPVLPTPVMPMGGNNAPLFPGMRPPVLPRPMPG 33
>gi|119499908|ref|XP_001266711.1| U1 small nuclear ribonucleoprotein C, putative [Neosartorya
fischeri NRRL 181]
gi|119414876|gb|EAW24814.1| U1 small nuclear ribonucleoprotein C, putative [Neosartorya
fischeri NRRL 181]
Length = 220
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVID 34
>gi|258573765|ref|XP_002541064.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901330|gb|EEP75731.1| predicted protein [Uncinocarpus reesii 1704]
Length = 222
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHL--GQTAA 63
SVRK HNAG H NV YYQQ ++ QS+ID + GQ AA
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAAA 48
>gi|213408669|ref|XP_002175105.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212003152|gb|EEB08812.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 189
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 12 YLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQ 52
+LTHDS SVRK HNAG H NV+ YY + +++ Q + +
Sbjct: 49 WLTHDSQSVRKAHNAGRAHLQNVQDYYARVAQEEAQKRLSE 89
>gi|315054963|ref|XP_003176856.1| hypothetical protein MGYG_00941 [Arthroderma gypseum CBS 118893]
gi|311338702|gb|EFQ97904.1| hypothetical protein MGYG_00941 [Arthroderma gypseum CBS 118893]
Length = 219
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLL-- 76
SVRK HN+G H NV YYQ+ ++ QS+ID T+++ G A + +L
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVIDSI-------TSSYAAEGQASSNPMLQH 54
Query: 77 -AQRPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSAPGM 123
A + P LP P+ G+A L PP +PG PP PGM
Sbjct: 55 AAGQAGYPPLPF-AFPVCGNADLT----PPPPGQPGALPPPPFGVPGM 97
>gi|115389784|ref|XP_001212397.1| predicted protein [Aspergillus terreus NIH2624]
gi|114194793|gb|EAU36493.1| predicted protein [Aspergillus terreus NIH2624]
Length = 196
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 2 SVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVID 34
>gi|146323889|ref|XP_751496.2| U1 snRNP complex component Yhc1 [Aspergillus fumigatus Af293]
gi|129557485|gb|EAL89458.2| U1 snRNP complex component Yhc1, putative [Aspergillus fumigatus
Af293]
Length = 199
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVID 34
>gi|358365365|dbj|GAA81987.1| hypothetical protein AKAW_00102 [Aspergillus kawachii IFO 4308]
Length = 172
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HNAG H NV YYQQ +++ QS+ID
Sbjct: 2 SVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVID 34
>gi|303312889|ref|XP_003066456.1| Formin 2, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240106118|gb|EER24311.1| Formin 2, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 224
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHL--GQTAA 63
SVRK HNAG H NV YYQQ ++ QS+ID + GQ AA
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAAA 48
>gi|2136118|pir||I56013 ribonucleoprotein - human (fragment)
gi|338261|gb|AAA36618.1| ribonucleoprotein, partial [Homo sapiens]
Length = 106
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 7/38 (18%)
Query: 29 KHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQ 66
KHK NV+ YYQ++ E+Q QSLID+ TAAFQQ
Sbjct: 5 KHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 35
>gi|378732333|gb|EHY58792.1| hypothetical protein HMPREF1120_06795 [Exophiala dermatitidis
NIH/UT8656]
Length = 185
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAA---FQQ 66
SVRK HN+G H NV YYQQ ++ QS+ID + + A FQQ
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQANPMFQQ 52
>gi|212535006|ref|XP_002147659.1| U1 snRNP complex component Yhc1, putative [Talaromyces marneffei
ATCC 18224]
gi|210070058|gb|EEA24148.1| U1 snRNP complex component Yhc1, putative [Talaromyces marneffei
ATCC 18224]
Length = 198
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HNAG H NV YYQQ ++ QS+ID
Sbjct: 2 SVRKAHNAGRNHIRNVVDYYQQIGHEKAQSVID 34
>gi|119192358|ref|XP_001246785.1| predicted protein [Coccidioides immitis RS]
Length = 223
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HNAG H NV YYQQ ++ QS+ID
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVID 34
>gi|67522989|ref|XP_659555.1| hypothetical protein AN1951.2 [Aspergillus nidulans FGSC A4]
gi|40745960|gb|EAA65116.1| hypothetical protein AN1951.2 [Aspergillus nidulans FGSC A4]
gi|259487310|tpe|CBF85883.1| TPA: U1 snRNP complex component Yhc1, putative (AFU_orthologue;
AFUA_4G13350) [Aspergillus nidulans FGSC A4]
Length = 219
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQQ +++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQQIGQEKAQSVID 34
>gi|242791795|ref|XP_002481826.1| U1 snRNP complex component Yhc1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218718414|gb|EED17834.1| U1 snRNP complex component Yhc1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 185
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HNAG H NV YYQQ ++ QS+ID
Sbjct: 2 SVRKAHNAGRNHIRNVVDYYQQIGHEKAQSVID 34
>gi|407921307|gb|EKG14458.1| Zinc finger U1-C type protein [Macrophomina phaseolina MS6]
Length = 200
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQQIGHEKAQSVID 34
>gi|327351579|gb|EGE80436.1| hypothetical protein BDDG_03377 [Ajellomyces dermatitidis ATCC
18188]
Length = 234
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVID 34
>gi|425768774|gb|EKV07290.1| hypothetical protein PDIG_73650 [Penicillium digitatum PHI26]
gi|425776134|gb|EKV14368.1| hypothetical protein PDIP_44120 [Penicillium digitatum Pd1]
Length = 228
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQQ +++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYQQIGQEKAQSVID 34
>gi|345562104|gb|EGX45176.1| hypothetical protein AOL_s00173g277 [Arthrobotrys oligospora ATCC
24927]
Length = 282
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 20 VRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
VRK HN G H NV YYQQ +++ QS+ID
Sbjct: 66 VRKAHNNGRNHIRNVVEYYQQIGQERAQSVID 97
>gi|327308252|ref|XP_003238817.1| U1 snRNP complex component Yhc1 [Trichophyton rubrum CBS 118892]
gi|326459073|gb|EGD84526.1| U1 snRNP complex component Yhc1 [Trichophyton rubrum CBS 118892]
Length = 210
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVID 34
>gi|302421744|ref|XP_003008702.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261351848|gb|EEY14276.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 179
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 34
>gi|326470816|gb|EGD94825.1| U1 small nuclear ribonucleoprotein C [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVID 34
>gi|326478028|gb|EGE02038.1| hypothetical protein TEQG_01078 [Trichophyton equinum CBS 127.97]
Length = 209
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQ+ ++ QS+ID
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVID 34
>gi|410912878|ref|XP_003969916.1| PREDICTED: WASP homolog-associated protein with actin, membranes
and microtubules-like [Takifugu rubripes]
Length = 740
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 30 HKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLLA--QRPRLPVLPT 87
H+ +++ Q+ EEQ+ + +DQ ++ LG+ +F++ Q+LL Q P LP
Sbjct: 499 HQIHLKREKQKEEEQRRKEWVDQEREKTLGRLRSFRE--KRQGQYLLKTPQAKVAPSLPY 556
Query: 88 PVMPMT--GSAPLVPGMRPPVLPRPGPSP 114
P P++ P VP PP + +P P P
Sbjct: 557 PSQPLSLISLGPSVPPDAPPSI-QPAPRP 584
>gi|346324162|gb|EGX93759.1| U1 small nuclear ribonucleoprotein C, putative [Cordyceps
militaris CM01]
Length = 181
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVID 34
>gi|46137243|ref|XP_390313.1| hypothetical protein FG10137.1 [Gibberella zeae PH-1]
Length = 178
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YY+Q ++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYEQIGHEKAQSVID 34
>gi|346974893|gb|EGY18345.1| hypothetical protein VDAG_08679 [Verticillium dahliae VdLs.17]
Length = 179
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
SVRK HN+G H NV YYQQ ++ QS+ID
Sbjct: 2 SVRKAHNSGRNHLRNVVYYYQQIGHEKAQSVID 34
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,830,064,954
Number of Sequences: 23463169
Number of extensions: 199322389
Number of successful extensions: 2209952
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6033
Number of HSP's successfully gapped in prelim test: 47113
Number of HSP's that attempted gapping in prelim test: 1481526
Number of HSP's gapped (non-prelim): 419374
length of query: 197
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 62
effective length of database: 9,191,667,552
effective search space: 569883388224
effective search space used: 569883388224
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)