BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029191
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZT6|TRL32_ARATH Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC2 PE=2 SV=1
Length = 192
Score = 207 bits (526), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 139/200 (69%), Gaps = 15/200 (7%)
Query: 1 MYGAIRLSPSLR-----FRTLLPTNPRDQSRDLFVPPRILSISSSNITKSVNFRGKIDNV 55
M + LS SLR L+P P Q+ F PR S T + +
Sbjct: 1 MSEIVNLSSSLRSLNPKISPLVP--PYRQTSSSFSRPRNFKYHS--FTDKICLAAERIRA 56
Query: 56 IRVTKHEGSIKELNEDDDDDHAPVSIPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWC 115
+ + K +G ++EL D +PVS+ L PI ES FD+V+ +AQ+L ESV+IVWMA+WC
Sbjct: 57 VDIQKQDGGLQEL------DDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWC 110
Query: 116 RKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVI 175
RKCIYLKPKLEKLAA+++PRLRFY+VDVNAVP++LV+RAGV KMPTIQLW+DG+KQAEVI
Sbjct: 111 RKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVI 170
Query: 176 GGHKSYLVINEVREMIGNEN 195
GGHK++ V+NEVREMI N++
Sbjct: 171 GGHKAHFVVNEVREMIENDS 190
>sp|Q9FG36|TRL31_ARATH Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC1 PE=2 SV=3
Length = 210
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 87/115 (75%)
Query: 78 PVSIPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLR 137
P ++ + PI + + D V++ A+QL + +II WMASWCRKCIYLKPKLEKLAA+Y+ R +
Sbjct: 93 PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152
Query: 138 FYNVDVNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYLVINEVREMIG 192
FY VDVN VP LV R + KMPTIQLWK+ + + EVIGGHK +LVI EVRE+I
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELIN 207
>sp|Q6Z7L3|TRL31_ORYSJ Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0774100 PE=2 SV=2
Length = 193
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Query: 81 IPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYN 140
+ + I S + D + + + + +II WMASWCRKCIYLKP+LEK+A ++ P +RFY
Sbjct: 80 VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRLEKIAGEF-PGVRFYF 138
Query: 141 VDVNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYLVINEVREMI 191
VDVN VP +V R + KMPTIQLWKDG+ AEVIGGHK++LV++EVREMI
Sbjct: 139 VDVNKVPQTVVKRGNITKMPTIQLWKDGEWAAEVIGGHKAWLVMDEVREMI 189
>sp|P29429|THIO_EMENI Thioredoxin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=TRX1 PE=1 SV=2
Length = 110
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 85 PIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
PI S+++F + A+ V++ A+WC C + P +EK A Y FY +DV+
Sbjct: 9 PITSKAEFQEKVLNAKGF---VVVDCFATWCGPCKAIAPTVEKFAQTYT-DASFYQIDVD 64
Query: 145 AVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
+ ++ A G+ MPT L+KDG+K ++V+G + L
Sbjct: 65 EL-SEVAAELGIRAMPTFLLFKDGQKVSDVVGANPGAL 101
>sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX1 PE=1 SV=3
Length = 103
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVD 142
+T + S+FD IA+ D+ V++ + A+WC C + P +EK + Y P+ FY +D
Sbjct: 2 VTQFKTASEFDSAIAQ----DKLVVVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLD 56
Query: 143 VNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGH 178
V+ + + + V MPT+ L+K+GK+ A+V+G +
Sbjct: 57 VDEL-GDVAQKNEVSAMPTLLLFKNGKEVAKVVGAN 91
>sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1
Length = 106
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVD 142
+TPI S +++ + +A V++ + A+WC C + P LEKL ++ H ++FY VD
Sbjct: 3 VTPIKSVAEYKEKVTDATG---PVVVDFHATWCGPCKAIAPALEKL-SETHTGIQFYKVD 58
Query: 143 VNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
V+ + ++ A GV MPT +K G++ EV G + + +
Sbjct: 59 VDEL-SEVAASNGVSAMPTFHFYKGGERNEEVKGANPAAI 97
>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX2 PE=1 SV=3
Length = 104
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVD 142
+T + S S++D +A +L V++ + A+WC C + P +EK A Y FY +D
Sbjct: 2 VTQLKSASEYDSALASGDKL---VVVDFFATWCGPCKMIAPMIEKFAEQYSDA-AFYKLD 57
Query: 143 VNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGH 178
V+ V + +A V MPT+ +K GK+ V+G +
Sbjct: 58 VDEV-SDVAQKAEVSSMPTLIFYKGGKEVTRVVGAN 92
>sp|O14463|TRX1_SCHPO Thioredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=trx1 PE=3 SV=3
Length = 103
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
+ S+F ++ + D+ V++ + A+WC C + PK E+ + Y F VDV+
Sbjct: 5 VSDSSEFKSIVCQ----DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDA-TFIKVDVDQ 59
Query: 146 VPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
+ ++ A AGV MP+ L+K+G+K E++G + + L
Sbjct: 60 L-SEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKL 95
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 70 EDDDDDHAPVSIPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLA 129
E D A V +P S+S++ + E+ D V++ + A WC C + P +++LA
Sbjct: 77 EAQDTTAAAVEVPNL---SDSEWQTKVLES---DVPVLVEFWAPWCGPCRMIHPIVDQLA 130
Query: 130 ADYHPRLRFYNVDVNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGG 177
D+ + +FY ++ + P+ R G+ +PT+ ++K G+K+ +IG
Sbjct: 131 KDFAGKFKFYKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>sp|Q8LD49|TRXX_ARATH Thioredoxin X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2
SV=2
Length = 182
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 89 ESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPH 148
ES+F + E+ Q V++ ++A+WC C + P +E L+ +Y +L +D +A P
Sbjct: 76 ESEFSSTVLESAQ---PVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANP- 131
Query: 149 KLVARAGVMKMPTIQLWKDGKK 170
KL+A V +P L+KDGK+
Sbjct: 132 KLIAEFKVYGLPHFILFKDGKE 153
>sp|P52230|THIO_STRCO Thioredoxin OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=trxA PE=1 SV=4
Length = 110
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 103 DESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMKMPTI 162
D+ V++ + A+WC C + P LE +AA+Y ++ ++++ P A+ GVM +PT+
Sbjct: 21 DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGT-AAKYGVMSIPTL 79
Query: 163 QLWKDGKKQAEVIGGHKSYLVINEVREMIGN 193
+++ G+ ++G ++ ++ + I +
Sbjct: 80 NVYQGGEVAKTIVGAKPKAAIVRDLEDFIAD 110
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 85 PIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
P+ ++S +D ++ +A DE V + + A WC C + P + +LA Y + +FY ++ +
Sbjct: 77 PVVNDSTWDSLVLKA---DEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTD 133
Query: 145 AVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGG 177
P + GV +PTI ++ +G+K+ +IG
Sbjct: 134 ESPAT-PGQYGVRSIPTIMIFVNGEKKDTIIGA 165
>sp|P0A0K5|THIO_STAAW Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|P0A0K6|THIO_STAAU Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|Q6GA69|THIO_STAAS Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3
SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|Q6GHU0|THIO_STAAR Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3
SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|P99122|THIO_STAAN Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1
SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|P0A0K4|THIO_STAAM Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=trxA PE=1 SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|Q5HGT9|THIO_STAAC Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|Q2YXD0|THIO_STAAB Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=trxA PE=3 SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|Q2FZD2|THIO_STAA8 Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA
PE=2 SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|Q2FHT6|THIO_STAA3 Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3
SV=1
Length = 104
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGQPVDKVVG 89
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA
PE=1 SV=5
Length = 108
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 103 DESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMKMPTI 162
D++V++ + ASWC C+ L P +E+LA DY + ++V+ P+ + + G+ +PT+
Sbjct: 20 DKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPN-IAGQYGIRSIPTM 78
Query: 163 QLWKDGKKQAEVIGGHKSYLVINEVREMIG 192
+ K GK +++G ++ ++ E IG
Sbjct: 79 LIIKGGKVVDQMVGALPKNMIAKKIDEHIG 108
>sp|O64764|TRXO1_ARATH Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana GN=At2g35010
PE=2 SV=1
Length = 194
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN- 144
+ SE +F +++AQ + + A+WC C ++ P + +L+ Y P + Y VD++
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQY-PDVTTYKVDIDE 147
Query: 145 AVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGG 177
+++ + +PT+ +K G K+ EV+G
Sbjct: 148 GGISNTISKLNITAVPTLHFFKGGSKKGEVVGA 180
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 106 VIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMKMPTIQLW 165
V++ + ASWC C + P + KL+ +Y +L Y ++ + P + + G+ +PT+ ++
Sbjct: 87 VLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPD-IATQFGIRSIPTMMIF 145
Query: 166 KDGKKQAEVIGGHKSYLVINEVREMIG 192
K+G+K+ VIG +++ + + IG
Sbjct: 146 KNGEKKDAVIGAVPESTLVSSIDKYIG 172
>sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1
Length = 175
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
+ E +D ++ + V++ + A WC C + P +++LA DY +++ V+ +
Sbjct: 72 VADEKNWDNMVIACES---PVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDD 128
Query: 146 VPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYLVINEVREMIGN 193
P+ + + G+ +PT+ ++KDG+K+ VIG + + + IG+
Sbjct: 129 CPN-IASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYIGS 175
>sp|Q4L5F0|THIO_STAHJ Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=trxA PE=3 SV=1
Length = 104
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I +L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSNFDENIQSGVKL-----VDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKFEVMSIPTLIVFKDGEPVDKVVG 89
>sp|Q8CPL5|THIO_STAES Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trxA PE=3 SV=1
Length = 104
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I +L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSDFDSKIESGVKL-----VDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGEPVDKVVG 89
>sp|Q5HQ29|THIO_STAEQ Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trxA PE=3 SV=1
Length = 104
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I +L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSDFDSKIESGVKL-----VDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKYEVMSIPTLIVFKDGEPVDKVVG 89
>sp|Q49WR2|THIO_STAS1 Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1
Length = 104
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSNFDDNIQSGVNL-----VDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENP 61
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
A+ VM +PT+ ++KDG+ +V+G
Sbjct: 62 ST-AAKFEVMSIPTLIVFKDGEPVDKVVG 89
>sp|Q655X0|TRXO_ORYSJ Thioredoxin O, mitochondrial OS=Oryza sativa subsp. japonica
GN=Os06g0665900 PE=2 SV=2
Length = 174
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDV-- 143
+GS F ++++ + + + A WC C + P + KL++ Y P++ Y VD+
Sbjct: 67 VGSAESFTSIMSKVEAEKLPAVFYYTAVWCGPCRAMAPVISKLSSRY-PKIPIYKVDIDM 125
Query: 144 NAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
+ V KL + + +PT + G+K EV+G + + L
Sbjct: 126 DGVGSKL-SDLKIFSVPTFHFYYQGRKTGEVVGANATKL 163
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 106 VIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMKMPTIQLW 165
V++ + A+WC C + P + KL+ +Y +L+ Y ++ + P + ++ GV +PT+ ++
Sbjct: 94 VLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDENPD-IASQYGVRSIPTMMIF 152
Query: 166 KDGKKQAEVIGGHKSYLVINEVREMI 191
K+G+K+ VIG +I + + +
Sbjct: 153 KNGEKKDAVIGAVPESTLIASIEKFV 178
>sp|P25372|TRX3_YEAST Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=TRX3 PE=1 SV=1
Length = 127
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVD 142
+T + + ++F +I + ++ ++I + A+WC C ++P L KL Y P +RF D
Sbjct: 27 ITKLTNLTEFRNLIKQ----NDKLVIDFYATWCGPCKMMQPHLTKLIQAY-PDVRFVKCD 81
Query: 143 VNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
V+ P + V MPT L KDG+ ++IG + + L
Sbjct: 82 VDESPD-IAKECEVTAMPTFVLGKDGQLIGKIIGANPTAL 120
>sp|Q7KQL8|THIO_PLAF7 Thioredoxin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0545
PE=1 SV=1
Length = 104
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
+ S+++FD +I++ +E VI+ + A WC C + P E+ + Y ++ F VDV+
Sbjct: 5 VTSQAEFDSIISQ----NELVIVDFFAEWCGPCKRIAPFYEECSKTY-TKMVFIKVDVDE 59
Query: 146 VPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
V ++ + + MPT +++K+G ++G + S L
Sbjct: 60 V-SEVTEKENITSMPTFKVYKNGSSVDTLLGANDSAL 95
>sp|Q93VQ9|TRXO2_ARATH Thioredoxin O2, mitochondrial OS=Arabidopsis thaliana GN=At1g31020
PE=2 SV=1
Length = 159
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN-AV 146
SE++F+ +++A+ + + A+WC C + P + +L+ Y P + Y VD++
Sbjct: 56 SEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKY-PDVTTYKVDIDEGG 114
Query: 147 PHKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
+ + V +PT+Q +K G K+AE++G
Sbjct: 115 LSNAIGKLNVSAVPTLQFFKGGVKKAEIVG 144
>sp|P08628|THIO_RABIT Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2
Length = 105
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
I S+S F V+ A D+ V++ + A+WC C +KP L+ ++ + F VDV+
Sbjct: 5 IESKSAFQEVLDSAG--DKLVVVDFSATWCGPCKMIKPFFHALSEKFN-NVVFIEVDVDD 61
Query: 146 VPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL--VINEV 187
+ A V MPT Q +K G+K E G +K L INE+
Sbjct: 62 CKD-IAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104
>sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1
Length = 107
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++ F++ + +++L V++ + A WC C + P +++LA +Y +++ ++ + P
Sbjct: 8 TDFSFEKEVVNSEKL---VLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENP 64
Query: 148 HKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYLVINEVREMI 191
+ A G+ +PT+ L+KDGK+ VIG + N +++ +
Sbjct: 65 S-ISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 85 PIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
P+ ++S ++ ++ +A DE V++ + A WC C + P + +LA Y +++F+ ++ +
Sbjct: 74 PMVNDSTWESLVLKA---DEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTD 130
Query: 145 AVPHKLVARAGVMKMPTIQLWKDGKKQAEVIGG 177
P + GV +PTI ++ G+K+ +IG
Sbjct: 131 DSPAT-PGKYGVRSIPTIMIFVKGEKKDTIIGA 162
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADY-HPRLRFYNV 141
+ I S FD IA V++ + A WC C L P LE LAA+ H + N+
Sbjct: 1 MVKIISSENFDSFIASGL-----VLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINI 55
Query: 142 DVNAVPHKLVARAGVMKMPTIQLWKDGKKQAEVIG 176
D N+ P + V +PT+ L+KDG + A V+G
Sbjct: 56 DENSKPAETYE---VSSIPTLILFKDGNEVARVVG 87
>sp|Q92249|ERP38_NEUCR Protein disulfide-isomerase erp38 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=erp38 PE=2 SV=2
Length = 369
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 93 DRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADY--HPRLRFYNVDVNA-VPHK 149
D I A D++V++ + A WC C L P EKLAA + P + VD +A K
Sbjct: 148 DATIKGAIGGDKNVLVAFTAPWCGHCKNLAPTWEKLAATFASDPEITIAKVDADAPTGKK 207
Query: 150 LVARAGVMKMPTIQLWKDGKKQAEVIGGHKS 180
A GV PTI+ + G E G +S
Sbjct: 208 SAAEYGVSGFPTIKFFPKGSTTPEDYNGGRS 238
>sp|P48384|TRXM_PEA Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 172
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 48 FRGKIDNVIRVTKHEGSIKELN---------EDDDDDHAPVSIPLTPIGSESQFDRVIAE 98
F+GK + ++ + S ELN E+ HA ++ + ++S +D ++
Sbjct: 24 FKGKACLLTSKSRIQESFAELNSFTSLVLLIENHVLLHAREAVNEVQVVNDSSWDELVIG 83
Query: 99 AQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMK 158
++ V++ + A WC C + P +++LA +Y +++ Y ++ + P+ + G+
Sbjct: 84 SET---PVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNT-ATKYGIRS 139
Query: 159 MPTIQLWKDGKKQAEVIGG 177
+PT+ +K+G+++ VIG
Sbjct: 140 IPTVLFFKNGERKDSVIGA 158
>sp|P00275|THIO1_CORNE Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1
Length = 105
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 101 QLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMKMP 160
Q E V++ + A WC C + P L+++A + +++ V+++ P L A+ GV +P
Sbjct: 16 QSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPE-LAAQFGVRSIP 74
Query: 161 TIQLWKDGKKQAEVIGG 177
T+ ++KDG+ A ++G
Sbjct: 75 TLLMFKDGELAANMVGA 91
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 91 QFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKL 150
+FD + +A++ + VII + ASWC C ++ P + A + P F VDV+ + ++
Sbjct: 16 EFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF-PGAVFLKVDVDEL-KEV 73
Query: 151 VARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
+ V MPT KDG + +V+G K L
Sbjct: 74 AEKYNVEAMPTFLFIKDGAEADKVVGARKDDL 105
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 91 QFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKL 150
+FD + +A++ + VII + ASWC C ++ P + A + P F VDV+ + ++
Sbjct: 16 EFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF-PGAVFLKVDVDEL-KEV 73
Query: 151 VARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
+ V MPT KDG + +V+G K L
Sbjct: 74 AEKYNVEAMPTFLFIKDGAEADKVVGARKDDL 105
>sp|O96952|THIO_GEOCY Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1
Length = 106
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
+ +++ FD+ + +A D+ V+I + ASWC C + PK ++A ++ P + FY VDV+
Sbjct: 5 LKTKADFDQALKDAG--DKLVVIDFTASWCGPCQRIAPKYVEMAKEF-PDVIFYKVDVDE 61
Query: 146 VPHKLVARAGVMKMPTIQLWKDGKKQAEVIGG 177
A + MPT + +K GK ++ + G
Sbjct: 62 NDETAEAEK-IQAMPTFKFYKSGKALSDYVQG 92
>sp|Q9UW02|THIO_COPCM Thioredoxin OS=Coprinus comatus PE=1 SV=1
Length = 106
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 106 VIIVWMASWCRKCIYLKPKLEKLAADYHPR-LRFYNVDVNAVPHKLVARAGVMKMPTIQL 164
+II + A+WC C + P EK + Y + F VDV+ + A + MPT Q+
Sbjct: 21 IIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASD-ISEEAKIRAMPTFQV 79
Query: 165 WKDGKKQAEVIGGHKSYL 182
+KDG+K E++G + + L
Sbjct: 80 YKDGQKIDELVGANPTAL 97
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 97 AEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGV 156
AE D+ ++ + A+WC C+ L P +E+LA DY + ++V+ P+ + G+
Sbjct: 15 AEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNT-AGQYGI 73
Query: 157 MKMPTIQLWKDGKKQAEVIGGHKSYLVINEVREMIG 192
+PT+ + K GK +++G ++ ++ E IG
Sbjct: 74 RSIPTMLIIKGGKVVDQMVGALPKNMIAKKLDEHIG 109
>sp|P11232|THIO_RAT Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2
Length = 105
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
I S+ F +A A D+ V++ + A+WC C +KP L D + + F VDV+
Sbjct: 5 IESKEAFQEALAAAG--DKLVVVDFSATWCGPCKMIKPFFHSL-CDKYSNVVFLEVDVDD 61
Query: 146 VPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
+ A V MPT Q +K G+K E G +K L
Sbjct: 62 C-QDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKL 97
>sp|P10639|THIO_MOUSE Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3
Length = 105
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
I S+ F +A A D+ V++ + A+WC C +KP L D + + F VDV+
Sbjct: 5 IESKEAFQEALAAAG--DKLVVVDFSATWCGPCKMIKPFFHSL-CDKYSNVVFLEVDVDD 61
Query: 146 VPHKLVARAGVMKMPTIQLWKDGKKQAEVIGGHKSYL 182
+ A V MPT Q +K G+K E G +K L
Sbjct: 62 C-QDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKL 97
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 106 VIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVMKMPTIQLW 165
V++ + A WC C L P LE LAA+ P + +D++A P + GV +PT+ L+
Sbjct: 19 VLVDFFAEWCGPCKMLTPVLEALAAEL-PYVTILKLDIDASPRP-AEQFGVSSIPTLILF 76
Query: 166 KDGKKQAEVIG 176
KDGK+ +G
Sbjct: 77 KDGKEVERSVG 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,799,193
Number of Sequences: 539616
Number of extensions: 2911254
Number of successful extensions: 8634
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 8445
Number of HSP's gapped (non-prelim): 307
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)