BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029195
MAEDLCSFTKDTFNLKSPKKSPLVLRMLVLVFVMVCGVYICSVCVKQISARTKSEFLNVQ
VIERPCPVPNIEPWEIPYVHYPKPKTYSRAECACNPVRYFAILSMQRSGSGWFETLLNNH
TNISSNGEVFSVKVRRSNASTIVETLDKIYNLDWFSSASKNECTAAVGLKWMLNQVRLLY
WKCSSISFSFQRPLVGS

High Scoring Gene Products

Symbol, full name Information P value
AT2G15730 protein from Arabidopsis thaliana 1.5e-67
AT3G50620 protein from Arabidopsis thaliana 1.1e-50

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029195
        (197 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2053578 - symbol:AT2G15730 "AT2G15730" species...   686  1.5e-67   1
TAIR|locus:2098710 - symbol:AT3G50620 "AT3G50620" species...   527  1.1e-50   1


>TAIR|locus:2053578 [details] [associations]
            symbol:AT2G15730 "AT2G15730" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
            evidence=IDA] GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR
            HOGENOM:HOG000238344 ProtClustDB:CLSN2690361 EMBL:BT011217
            EMBL:BT012148 IPI:IPI00524886 RefSeq:NP_179175.3 UniGene:At.40360
            ProteinModelPortal:Q6NM29 EnsemblPlants:AT2G15730.1 GeneID:816067
            KEGG:ath:AT2G15730 TAIR:At2g15730 eggNOG:NOG265567 OMA:NTTRHIF
            PhylomeDB:Q6NM29 Genevestigator:Q6NM29 Uniprot:Q6NM29
        Length = 344

 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 125/175 (71%), Positives = 139/175 (79%)

Query:     1 MAEDLCSFTKDTFNLKSPKKSPXXXXXXXXXXXXXCGVYICSVCVKQISARTKSEFLNVQ 60
             M ++     KD+F  K PKKSP             C VYICS+C+KQI     + FLNV+
Sbjct:     1 MGDEHSLIPKDSFVFKLPKKSPLVLRTVVLLFVMVCTVYICSICLKQIGVVPSAGFLNVE 60

Query:    61 VIERPCPVPNIEPWEIPYVHYPKPKTYSRAECACNPVRYFAILSMQRSGSGWFETLLNNH 120
             V ERPCP PNI+PW+IPYVHYPKPKTYSR EC+CNPVRYFAILSMQRSGSGWFETLLNNH
Sbjct:    61 VFERPCPEPNIQPWDIPYVHYPKPKTYSREECSCNPVRYFAILSMQRSGSGWFETLLNNH 120

Query:   121 TNISSNGEVFSVKVRRSNASTIVETLDKIYNLDWFSSASKNECTAAVGLKWMLNQ 175
             TNISSNGE+FSVK RR+N STI ETLDK+YNLDW SSASKNECT+AVGLKWMLNQ
Sbjct:   121 TNISSNGEIFSVKDRRANVSTIFETLDKVYNLDWLSSASKNECTSAVGLKWMLNQ 175


>TAIR|locus:2098710 [details] [associations]
            symbol:AT3G50620 "AT3G50620" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008146
            "sulfotransferase activity" evidence=IEA] InterPro:IPR000863
            Pfam:PF00685 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008146
            EMBL:BT012220 EMBL:BT028938 IPI:IPI00520113 RefSeq:NP_190631.2
            UniGene:At.35472 ProteinModelPortal:Q6NLV9
            EnsemblPlants:AT3G50620.1 GeneID:824225 KEGG:ath:AT3G50620
            TAIR:At3g50620 eggNOG:NOG147593 HOGENOM:HOG000238344
            InParanoid:Q6NLV9 OMA:KNWEDIN PhylomeDB:Q6NLV9
            ProtClustDB:CLSN2690361 Genevestigator:Q6NLV9 Uniprot:Q6NLV9
        Length = 340

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 100/177 (56%), Positives = 128/177 (72%)

Query:     1 MAEDLCSFTKDT--FNLKSPKKSPXXXXXXXXXXXXXCGVYICSVCVKQISARTKSEFLN 58
             MAE +C F KD+    +K PKKSP             CG+YIC+VC+KQ+S      F  
Sbjct:     1 MAEYICLFGKDSAAIVIKQPKKSPLFLRMIVLVFAMVCGLYICAVCLKQLS---NVSFQT 57

Query:    59 VQVIERPCPVPNIEPWEIPYVHYPKPKTYSRAECACNPVRYFAILSMQRSGSGWFETLLN 118
              Q+++   P+ +     +  +HYPKP+T++RAEC  NPVRYFAILSMQRSGSGWFETLLN
Sbjct:    58 SQLVQTS-PIDSHSLRFVTRIHYPKPQTFNRAECGHNPVRYFAILSMQRSGSGWFETLLN 116

Query:   119 NHTNISSNGEVFSVKVRRSNASTIVETLDKIYNLDWFSSASKNECTAAVGLKWMLNQ 175
             +H N+SSNGE+FSV  RR N S+I++TLD++YNLDWF+SASKNEC+AA+G KWMLNQ
Sbjct:   117 SHNNVSSNGEIFSVLDRRKNISSIIQTLDRVYNLDWFTSASKNECSAAIGFKWMLNQ 173


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      197       184   0.00078  110 3  11 22  0.41    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  185 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  17.38u 0.10s 17.48t   Elapsed:  00:00:02
  Total cpu time:  17.38u 0.10s 17.48t   Elapsed:  00:00:03
  Start:  Fri May 10 09:39:02 2013   End:  Fri May 10 09:39:05 2013

Back to top