Query 029195
Match_columns 197
No_of_seqs 59 out of 61
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 14:37:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029195.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029195hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tex_A STF0 sulfotransferase; 99.3 4.6E-14 1.6E-18 118.7 -4.6 106 90-196 18-168 (287)
2 4gox_A Polyketide synthase; ol 97.9 5.9E-06 2E-10 66.2 2.6 29 102-130 29-57 (313)
3 4gbm_A CURM sulfotransferase; 97.7 9.3E-06 3.2E-10 65.8 2.1 33 96-129 32-64 (323)
4 3ap1_A Protein-tyrosine sulfot 97.6 2.1E-05 7.1E-10 66.4 2.8 37 93-129 41-78 (337)
5 3bd9_A Heparan sulfate glucosa 97.6 2.1E-05 7E-10 64.0 2.6 37 93-129 20-57 (280)
6 2zq5_A Putative uncharacterize 97.5 7.5E-05 2.6E-09 63.9 4.2 33 98-130 92-126 (384)
7 1nst_A NST1, heparan sulfate N 97.4 4.3E-05 1.5E-09 63.5 2.2 34 92-127 44-77 (325)
8 1t8t_A Heparan sulfate D-gluco 97.3 6.7E-05 2.3E-09 59.8 2.1 33 97-129 17-50 (271)
9 3uan_A Heparan sulfate glucosa 96.9 0.00036 1.2E-08 58.3 2.1 39 89-129 10-49 (269)
10 2z6v_A Putative uncharacterize 96.8 0.00056 1.9E-08 59.4 2.7 34 98-131 107-140 (414)
11 3rnl_A Sulfotransferase; struc 95.7 0.0032 1.1E-07 53.4 1.6 31 99-129 10-42 (311)
12 1zd1_A Sulfotransferase 4A1; S 95.6 0.0042 1.4E-07 50.9 1.7 26 98-123 46-71 (284)
13 1q20_A SULT2B1B, sulfotransfer 95.1 0.0055 1.9E-07 50.5 1.0 24 99-122 49-72 (299)
14 2zpt_X Tyrosine-ester sulfotra 94.6 0.0077 2.6E-07 49.7 0.6 25 100-124 41-65 (295)
15 1ls6_A ARYL sulfotransferase; 94.4 0.0088 3E-07 49.1 0.6 24 100-123 41-64 (295)
16 2reo_A Putative sulfotransfera 94.1 0.012 3.9E-07 49.0 0.6 24 100-123 50-73 (305)
17 3ckl_A Sulfotransferase family 93.6 0.015 5.2E-07 48.0 0.5 24 100-123 43-66 (298)
18 2gwh_A Sulfotransferase 1C2; s 93.3 0.026 8.9E-07 46.6 1.5 27 100-129 44-70 (298)
19 1q1q_A SULT2B1A, sulfotransfer 93.1 0.025 8.5E-07 48.7 1.1 28 99-129 47-74 (350)
20 1j99_A Alcohol sulfotransferas 92.2 0.047 1.6E-06 44.7 1.6 21 99-119 44-64 (293)
21 3bfx_A Sulfotransferase 1C2; P 92.1 0.029 9.8E-07 46.3 0.1 24 100-123 42-65 (296)
22 2ov8_A STAL; sulfotransferase, 89.9 0.063 2.1E-06 44.4 0.1 26 99-124 22-47 (288)
23 1aqu_A EST, estrogen sulfotran 89.3 0.088 3E-06 43.6 0.6 23 100-122 43-65 (297)
24 1q44_A RARO47, steroid sulfotr 76.7 0.9 3.1E-05 38.3 1.5 21 100-120 68-88 (326)
25 1fmj_A Retinol dehydratase; su 62.5 2.8 9.6E-05 36.0 1.6 19 100-118 66-84 (351)
26 1wzv_A Ubiquitin-conjugating e 54.6 9.8 0.00034 29.0 3.3 33 119-151 77-115 (155)
27 2ucz_A UBC7, ubiquitin conjuga 50.0 13 0.00046 28.6 3.4 33 119-151 78-128 (165)
28 2aak_A UBC1, ubiquitin conjuga 46.5 17 0.00059 27.5 3.5 33 119-151 77-114 (152)
29 1ayz_A UBC2, ubiquitin-conjuga 45.6 11 0.00037 29.6 2.3 33 119-151 77-114 (169)
30 4gpr_A Ubiquitin-conjugating e 44.7 11 0.00039 28.6 2.2 29 120-148 78-111 (151)
31 2r0j_A Ubiquitin carrier prote 43.3 12 0.00043 28.3 2.2 32 119-150 74-110 (149)
32 2fo3_A Ubiquitin-conjugating e 42.7 13 0.00044 27.5 2.2 12 119-130 80-91 (125)
33 1jat_A Ubiquitin-conjugating e 42.7 12 0.00042 28.5 2.1 31 119-149 78-113 (155)
34 2q0v_A Ubiquitin-conjugating e 42.5 11 0.00039 29.3 1.9 28 119-146 98-132 (156)
35 1zdn_A Ubiquitin-conjugating e 42.0 14 0.00046 28.5 2.3 32 119-150 86-122 (158)
36 1c4z_D UBCH7, ubiquitin conjug 40.0 23 0.00077 27.0 3.2 33 119-151 75-113 (154)
37 1z2u_A Ubiquitin-conjugating e 40.0 15 0.00051 27.9 2.2 32 119-150 77-113 (150)
38 3mgb_A TEG12; sulfotransferase 39.3 10 0.00035 33.1 1.3 21 99-119 38-58 (319)
39 1y8x_A Ubiquitin-conjugating e 38.3 16 0.00055 28.2 2.2 32 119-150 77-113 (160)
40 1jat_B Ubiquitin-conjugating e 37.0 16 0.00054 27.5 1.9 11 119-129 83-94 (138)
41 2gjd_A Ubiquitin-conjugating e 36.9 22 0.00076 27.2 2.8 33 119-151 82-121 (157)
42 2nvu_C NEDD8-conjugating enzym 36.8 17 0.00057 28.9 2.1 32 119-150 97-133 (180)
43 3mjh_B Early endosome antigen 36.6 6.2 0.00021 24.8 -0.3 13 39-51 6-18 (34)
44 2e2c_A Ubiquitin conjugating e 35.4 23 0.00078 27.1 2.6 32 119-150 82-118 (156)
45 2a7l_A Hypothetical ubiquitin- 33.8 22 0.00074 27.1 2.2 11 120-130 100-110 (136)
46 2c4o_A Ubiquitin-conjugating e 33.7 21 0.00072 27.8 2.2 32 119-150 92-128 (165)
47 2ayv_A Ubiquitin-conjugating e 33.7 21 0.00072 27.9 2.2 32 119-150 94-130 (166)
48 2grr_A Ubiquitin-conjugating e 33.4 23 0.00079 27.2 2.4 33 119-151 85-124 (161)
49 3h8k_A Ubiquitin-conjugating e 31.8 24 0.00081 27.0 2.2 31 120-150 78-126 (164)
50 3o2u_A NEDD8-conjugating enzym 31.3 25 0.00084 28.1 2.3 32 119-150 106-142 (190)
51 1fxt_A Ubiquitin-conjugating e 29.9 24 0.00082 26.7 1.9 32 119-150 75-112 (149)
52 2zbc_A 83AA long hypothetical 29.2 84 0.0029 20.2 4.3 57 97-153 2-64 (83)
53 1yh2_A HSPC150 protein similar 28.4 29 0.00099 27.0 2.2 32 119-150 77-117 (169)
54 2awf_A Ubiquitin-conjugating e 27.8 30 0.001 27.1 2.2 12 119-130 91-102 (172)
55 2cvi_A 75AA long hypothetical 27.7 83 0.0028 20.8 4.1 58 97-154 2-65 (83)
56 2h2y_A Ubiquitin-conjugating e 27.7 19 0.00064 27.2 0.9 12 119-130 94-105 (136)
57 1yjd_C TP44, T-cell-specific s 27.6 37 0.0013 25.9 2.6 43 36-78 91-137 (140)
58 1i7k_A Ubiquitin-conjugating e 26.9 50 0.0017 26.2 3.3 33 119-151 103-140 (179)
59 3rcz_B SUMO-conjugating enzyme 26.8 36 0.0012 26.5 2.4 32 119-150 88-126 (163)
60 2yyk_A 4-hydroxyphenylacetate- 26.5 32 0.0011 30.7 2.3 45 105-149 1-49 (481)
61 3bzh_A Ubiquitin-conjugating e 25.9 34 0.0012 27.5 2.2 30 119-148 121-155 (194)
62 3fn1_B NEDD8-conjugating enzym 25.3 22 0.00076 27.3 1.0 32 119-150 87-129 (167)
63 3rrq_A Protein PD-1, programme 25.2 67 0.0023 22.5 3.5 39 36-74 87-126 (129)
64 3k9o_A Ubiquitin-conjugating e 25.1 36 0.0012 27.1 2.2 32 119-150 81-118 (201)
65 2c2v_B Ubiquitin-conjugating e 25.0 23 0.00078 27.1 1.0 32 119-150 78-114 (154)
66 3hwc_A Chlorophenol-4-monooxyg 24.2 27 0.00092 32.0 1.5 46 107-153 2-47 (515)
67 2oqt_A Hypothetical protein SP 24.0 22 0.00075 26.5 0.7 81 63-148 67-148 (162)
68 2bep_A Ubiquitin-conjugating e 22.8 44 0.0015 25.5 2.2 32 119-150 84-121 (159)
69 1u8v_A Gamma-aminobutyrate met 22.6 37 0.0013 30.5 2.0 46 105-150 1-50 (490)
70 3rz3_A Ubiquitin-conjugating e 22.4 76 0.0026 24.9 3.6 33 119-151 81-131 (183)
71 2djw_A Probable transcriptiona 21.4 49 0.0017 22.3 2.0 56 97-152 2-63 (92)
72 2cyy_A Putative HTH-type trans 21.1 1.1E+02 0.0038 22.1 4.1 58 96-153 66-128 (151)
73 2cfx_A HTH-type transcriptiona 20.9 1E+02 0.0034 22.3 3.8 56 95-150 63-123 (144)
74 3u9w_A Leukotriene A-4 hydrola 20.8 35 0.0012 31.1 1.5 41 141-181 513-565 (608)
75 2a0j_A PTS system, nitrogen re 20.7 22 0.00076 25.7 0.2 75 69-145 71-145 (149)
76 4ds2_A Ubiquitin-conjugating e 20.5 30 0.001 26.8 0.8 33 119-151 95-133 (167)
77 2hlw_A Ubiquitin-conjugating e 20.4 48 0.0017 26.1 2.1 28 119-146 112-147 (170)
No 1
>1tex_A STF0 sulfotransferase; sulfolipid, sulfation, TREH trehalose-2-sulfate; HET: TRE; 2.60A {Mycobacterium smegmatis} SCOP: c.37.1.5
Probab=99.29 E-value=4.6e-14 Score=118.71 Aligned_cols=106 Identities=20% Similarity=0.142 Sum_probs=71.3
Q ss_pred CccccCCceeeEEEEeeccCchhHHHhhccCCCcccCccccchhh-------hhhcH-----HHHHHHHHhh-------h
Q 029195 90 AECACNPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKV-------RRSNA-----STIVETLDKI-------Y 150 (197)
Q Consensus 90 ~ECacnPvr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~-------Rr~ni-----ssi~~tlD~v-------y 150 (197)
.+=.++|+++|+|++||||||+|+|++||+|+++..+||.|+... ++..+ .+|++.++.. +
T Consensus 18 ~~~m~~~~~~ffIvG~pRSGSTlLe~~L~sh~~~g~p~e~f~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~~ 97 (287)
T 1tex_A 18 GSHMSDHPTAYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPNTSMSPQPREWFADVEDQSILRLLDPLIEGKPDLA 97 (287)
T ss_dssp -----CCCCEEEEEECTTSTHHHHHHHHHHHTSSCCCCCTTCCCTTTSSCCCHHHHTCC-CCTTTTTTSCCCCCCCCCCC
T ss_pred hhhcCCCCCeEEEEcCCCCcHHHHHHHHHcCCCCCCcHHHHhcccccccccchhhhhhccchhHHHhhhccccccchhhh
Confidence 344678999999999999999999999999999999999998332 22222 2333333321 1
Q ss_pred cc-cccccc--ccchhhhhhhhHHHHhhHH-----------------H----HHHhhcCce--EEEecCCCC
Q 029195 151 NL-DWFSSA--SKNECTAAVGLKWMLNQVR-----------------L----LYWKCSSIS--FSFQRPLVG 196 (197)
Q Consensus 151 nl-DW~sSA--sKNectaA~GfKWMlnQG~-----------------m----~y~~~rgVs--fLfRrNlLr 196 (197)
.. +|+.++ .++.++.++|+|+|.||.. . ++|-+ |+. +|.|||.++
T Consensus 98 ~~~~yl~~~~~~~~~~~~~~g~~~~~~~~~~~~~rl~~~p~~~~~~l~~~I~~~fp~-~ak~I~l~Rrdpl~ 168 (287)
T 1tex_A 98 PATIWRDYIQTVGRTPNGVWGGKLMWNQTPLLVQRAKDLPDRSGSGLLSAIRDVVGS-DPVLIHIHRPDVVS 168 (287)
T ss_dssp CHHHHHHHHHHHTBCTTSCEEEEEEGGGHHHHHHHHTTCTTCCCSSHHHHHHHHHTS-CCEEEECBCCCHHH
T ss_pred hHHHHHHHHHHhccCCCcceeeeecccccHHHHHHhhcCccccchhhHHHHHHhcCC-CcEEEEEEcCCcHH
Confidence 11 365554 2356788899999998842 1 66766 666 888888654
No 2
>4gox_A Polyketide synthase; olefin synthase, hydrocarbon, sulfotran PAPS, PAP, 3'phosphoadenosine-5'phosphosulfate, transferase; HET: A3P; 2.15A {Synechococcus SP}
Probab=97.85 E-value=5.9e-06 Score=66.23 Aligned_cols=29 Identities=38% Similarity=0.509 Sum_probs=27.4
Q ss_pred EEEeeccCchhHHHhhccCCCcccCcccc
Q 029195 102 ILSMQRSGSGWFETLLNNHTNISSNGEVF 130 (197)
Q Consensus 102 ilsmqRSGs~wfetlLnsHpnIsSnGEif 130 (197)
|++++||||+|++.+|++||+|.+-||..
T Consensus 29 IvG~pRSGTTlL~~iL~~Hp~v~~~~E~~ 57 (313)
T 4gox_A 29 ILSSPRSGSTLLRVMLAGHPGLYSPPELH 57 (313)
T ss_dssp EECCTTSSHHHHHHHHHTSTTEECCSCCC
T ss_pred EECCCCCHHHHHHHHHHcCCCCccCCchh
Confidence 78999999999999999999999999963
No 3
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta}
Probab=97.74 E-value=9.3e-06 Score=65.77 Aligned_cols=33 Identities=39% Similarity=0.541 Sum_probs=28.8
Q ss_pred CceeeEEEEeeccCchhHHHhhccCCCcccCccc
Q 029195 96 PVRYFAILSMQRSGSGWFETLLNNHTNISSNGEV 129 (197)
Q Consensus 96 Pvr~FailsmqRSGs~wfetlLnsHpnIsSnGEi 129 (197)
|.-.| |++++||||+|++.+|++||+|.+-||.
T Consensus 32 P~~IF-IvG~pRSGTTlL~~iL~~Hp~v~~~~E~ 64 (323)
T 4gbm_A 32 PGIIF-ILSSPRSGSTLLRVMLAGHSSLFSPPEL 64 (323)
T ss_dssp ECCEE-EEECTTSSHHHHHHHHHTCTTEECCSCC
T ss_pred CCcEE-EECCCCCHHHHHHHHHHcCCCcccCCCc
Confidence 43344 6899999999999999999999999996
No 4
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A*
Probab=97.63 E-value=2.1e-05 Score=66.40 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=31.9
Q ss_pred ccCCcee-eEEEEeeccCchhHHHhhccCCCcccCccc
Q 029195 93 ACNPVRY-FAILSMQRSGSGWFETLLNNHTNISSNGEV 129 (197)
Q Consensus 93 acnPvr~-FailsmqRSGs~wfetlLnsHpnIsSnGEi 129 (197)
.|+..++ +.|+++|||||+|++.+|++||.|.+.||.
T Consensus 41 ~~~~~~P~ifIvG~pRSGTTlL~~~L~~hp~i~~~~E~ 78 (337)
T 3ap1_A 41 RYGKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEET 78 (337)
T ss_dssp ECCTTSCCEEEECSSSSSHHHHHHHHHTSTTEECCSCC
T ss_pred eecCCCCCEEEECCCCChHHHHHHHHhcCCCCcCCCcc
Confidence 3343344 889999999999999999999999999997
No 5
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate biosynthesis, substrate specificity, glycoprotein, golgi apparatus, membrane; HET: A3P; 2.30A {Homo sapiens}
Probab=97.63 E-value=2.1e-05 Score=63.99 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=30.5
Q ss_pred ccCCceeeEEEEeeccCchhHHHhhccCCCcccC-ccc
Q 029195 93 ACNPVRYFAILSMQRSGSGWFETLLNNHTNISSN-GEV 129 (197)
Q Consensus 93 acnPvr~FailsmqRSGs~wfetlLnsHpnIsSn-GEi 129 (197)
.|...-.|.|+++|||||+|++++|+.||+|.++ +|+
T Consensus 20 ~~~~~p~~~iiG~pKsGTT~L~~~L~~Hp~i~~~~~E~ 57 (280)
T 3bd9_A 20 HMQQLPKAIIIGVRKGGTRALLEMLNLHPAVVKASQEI 57 (280)
T ss_dssp CEECCCSEEEEECTTSSHHHHHHHHTTSTTEEECSSCC
T ss_pred ccCCCCCEEEECCCCccHHHHHHHHHhCCCcccCCCcC
Confidence 3333445899999999999999999999999986 454
No 6
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A {Mycobacterium tuberculosis}
Probab=97.48 E-value=7.5e-05 Score=63.91 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=29.7
Q ss_pred eeeEEEEeeccCchhHHHhhccCCCcccCc--ccc
Q 029195 98 RYFAILSMQRSGSGWFETLLNNHTNISSNG--EVF 130 (197)
Q Consensus 98 r~FailsmqRSGs~wfetlLnsHpnIsSnG--Eif 130 (197)
++..|++++||||+|++.+|++||.|.+.| |..
T Consensus 92 ~PIFI~G~PRSGTTlL~~lL~~hp~~~~~~~~E~~ 126 (384)
T 2zq5_A 92 RPIFVTGLVRTGTTALHRLLGADPAHQGLHMWLAE 126 (384)
T ss_dssp SCEEEECCTTSSHHHHHHHHTTSTTEEECBHHHHH
T ss_pred CCeEEeCCCCCchHHHHHHHccCccccchhHHHhc
Confidence 345899999999999999999999999999 654
No 7
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP, haparin sulfate, haparin sulfate biosynthesis, glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP: c.37.1.5
Probab=97.44 E-value=4.3e-05 Score=63.53 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=29.7
Q ss_pred cccCCceeeEEEEeeccCchhHHHhhccCCCcccCc
Q 029195 92 CACNPVRYFAILSMQRSGSGWFETLLNNHTNISSNG 127 (197)
Q Consensus 92 CacnPvr~FailsmqRSGs~wfetlLnsHpnIsSnG 127 (197)
|.|.| .|.|+++|||||+|++++|+.||+|.++|
T Consensus 44 ~~~~p--~~~IiG~pKsGTT~L~~~L~~HP~i~~~~ 77 (325)
T 1nst_A 44 CDRFP--KLLIIGPQKTGTTALYLFLGMHPDLSSNY 77 (325)
T ss_dssp CTTSE--EEEECCCTTSSHHHHHHHHHTSTTEEECC
T ss_pred cccCC--CEEEECCCCccHHHHHHHHHhCcCcccCC
Confidence 45554 48899999999999999999999999983
No 8
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1; alpha-beta motif, substrate-binding cleft; HET: A3P CIT; 1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A*
Probab=97.35 E-value=6.7e-05 Score=59.85 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=29.4
Q ss_pred ceeeEEEEeeccCchhHHHhhccCCCcccCc-cc
Q 029195 97 VRYFAILSMQRSGSGWFETLLNNHTNISSNG-EV 129 (197)
Q Consensus 97 vr~FailsmqRSGs~wfetlLnsHpnIsSnG-Ei 129 (197)
.--|.|+++|||||+|+.++|..||+|.+.+ |.
T Consensus 17 ~p~~~iiG~pKsGTT~l~~~L~~hp~v~~~~~e~ 50 (271)
T 1t8t_A 17 LPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEP 50 (271)
T ss_dssp CCSEEEEECTTSSHHHHHHHHTTSTTEEECSSCC
T ss_pred CCCEEEECCCchHHHHHHHHHHhCCCcCcCCCcC
Confidence 3358999999999999999999999999887 55
No 9
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif, CO-FACT PAPS/PAP, heparan sulfate oligosaccharides, golgi-localized transferase; HET: A3P NGY BDP SGN IDS; 1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A*
Probab=96.86 E-value=0.00036 Score=58.32 Aligned_cols=39 Identities=18% Similarity=0.338 Sum_probs=33.3
Q ss_pred CCccccCCceeeEEEEeeccCchhHHHhhccCCCcccC-ccc
Q 029195 89 RAECACNPVRYFAILSMQRSGSGWFETLLNNHTNISSN-GEV 129 (197)
Q Consensus 89 R~ECacnPvr~FailsmqRSGs~wfetlLnsHpnIsSn-GEi 129 (197)
.+-|.|-|- |.|+.+||+||+++.+.|..||.|... +|+
T Consensus 10 ~~~~~~~P~--f~iiG~~K~GTt~L~~~L~~HP~v~~~~kE~ 49 (269)
T 3uan_A 10 NGSTQQLPQ--TIIIGVRKGGTRALLEMLSLHPDVAAAENEV 49 (269)
T ss_dssp --CEECCCS--EEECCCTTSSHHHHHHHHTTSTTEEECSSCC
T ss_pred CCccccCCC--EEEECCCCchHHHHHHHHHHCcCcccccccc
Confidence 466777774 999999999999999999999999987 665
No 10
>2z6v_A Putative uncharacterized protein; sulfotransferase, unknown function; HET: PLM; 2.60A {Mycobacterium avium}
Probab=96.78 E-value=0.00056 Score=59.39 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=30.3
Q ss_pred eeeEEEEeeccCchhHHHhhccCCCcccCccccc
Q 029195 98 RYFAILSMQRSGSGWFETLLNNHTNISSNGEVFS 131 (197)
Q Consensus 98 r~FailsmqRSGs~wfetlLnsHpnIsSnGEif~ 131 (197)
++-.|++++||||++++.+|.+||.|.+-||...
T Consensus 107 ~PIFIvG~PRSGTTlL~~lL~~hp~~~~~~~~~~ 140 (414)
T 2z6v_A 107 RPLIVLGMPRTGTTVISYLLDQDPARRSLLHWQC 140 (414)
T ss_dssp SCEEEEESTTSCCHHHHHHHTTCTTEEECBGGGG
T ss_pred CCeEEeCCCCCchHHHHHHHccCCCcCchhHHHh
Confidence 4568999999999999999999999999998543
No 11
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp}
Probab=95.71 E-value=0.0032 Score=53.38 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=28.2
Q ss_pred eeEEEEeeccCchhHHHhhccCCCccc--Cccc
Q 029195 99 YFAILSMQRSGSGWFETLLNNHTNISS--NGEV 129 (197)
Q Consensus 99 ~FailsmqRSGs~wfetlLnsHpnIsS--nGEi 129 (197)
-|.|+.+||+||+|+.+.|+.||.|.. .+|+
T Consensus 10 ~f~iiGa~K~GTT~L~~~L~~HP~v~~~~~kE~ 42 (311)
T 3rnl_A 10 NFFIVGAAKCGTSSLDRYLSQHPDIYIPPKKEA 42 (311)
T ss_dssp SEEECCCTTSSHHHHHHHHHTSTTEECCSCCCC
T ss_pred CEEEECCCcchHHHHHHHHHhCcCcccCCCCcC
Confidence 499999999999999999999999986 4775
No 12
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural genomics conso transferase; 2.24A {Homo sapiens}
Probab=95.55 E-value=0.0042 Score=50.88 Aligned_cols=26 Identities=12% Similarity=0.151 Sum_probs=23.1
Q ss_pred eeeEEEEeeccCchhHHHhhccCCCc
Q 029195 98 RYFAILSMQRSGSGWFETLLNNHTNI 123 (197)
Q Consensus 98 r~FailsmqRSGs~wfetlLnsHpnI 123 (197)
..+.|+|+|||||+|++++|.+|++.
T Consensus 46 ~di~iv~~PKSGTTwl~~il~~~~~~ 71 (284)
T 1zd1_A 46 SDVWIVTYPKSGTSLLQEVVYLVSQG 71 (284)
T ss_dssp TCEEEEECTTCSCHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHHcC
Confidence 34789999999999999999998764
No 13
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A {Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A*
Probab=95.08 E-value=0.0055 Score=50.52 Aligned_cols=24 Identities=17% Similarity=0.374 Sum_probs=22.3
Q ss_pred eeEEEEeeccCchhHHHhhccCCC
Q 029195 99 YFAILSMQRSGSGWFETLLNNHTN 122 (197)
Q Consensus 99 ~FailsmqRSGs~wfetlLnsHpn 122 (197)
.+.|+|+|||||+|++++|..|++
T Consensus 49 di~iv~~PKsGTTwl~~il~~~~~ 72 (299)
T 1q20_A 49 DIFIITYPKSGTTWMIEIICLILK 72 (299)
T ss_dssp CEEEEESTTSSHHHHHHHHHHHHT
T ss_pred CEEEEccCCCHHHHHHHHHHHHHh
Confidence 489999999999999999999876
No 14
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine, sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB: 2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X*
Probab=94.56 E-value=0.0077 Score=49.71 Aligned_cols=25 Identities=24% Similarity=0.433 Sum_probs=22.9
Q ss_pred eEEEEeeccCchhHHHhhccCCCcc
Q 029195 100 FAILSMQRSGSGWFETLLNNHTNIS 124 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsHpnIs 124 (197)
..|+|+|||||+|++++|.+|++..
T Consensus 41 i~i~s~PKSGTTWl~~il~~~~~~~ 65 (295)
T 2zpt_X 41 ILISTYPKSGTTWVSEILDLIYNNG 65 (295)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHTTT
T ss_pred EEEEecCccchHHHHHHHHHHHhCC
Confidence 5899999999999999999999863
No 15
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive cooperativity, two substrate binding sites; HET: A3P NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A* 3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A* 3qvu_A* 1z29_A* 1cjm_A 2a3r_A*
Probab=94.40 E-value=0.0088 Score=49.10 Aligned_cols=24 Identities=21% Similarity=0.405 Sum_probs=22.2
Q ss_pred eEEEEeeccCchhHHHhhccCCCc
Q 029195 100 FAILSMQRSGSGWFETLLNNHTNI 123 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsHpnI 123 (197)
..|+|+|||||+|++++|..|++.
T Consensus 41 i~i~s~PKSGTTwl~~il~~~~~~ 64 (295)
T 1ls6_A 41 LLISTYPKSGTTWVSQILDMIYQG 64 (295)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCchHHHHHHHHHHHhC
Confidence 689999999999999999998875
No 16
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens} PDB: 2h8k_A*
Probab=94.06 E-value=0.012 Score=49.00 Aligned_cols=24 Identities=21% Similarity=0.490 Sum_probs=21.9
Q ss_pred eEEEEeeccCchhHHHhhccCCCc
Q 029195 100 FAILSMQRSGSGWFETLLNNHTNI 123 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsHpnI 123 (197)
..|+|+|||||+|++++|.+|++.
T Consensus 50 i~i~s~PKSGTTWl~~il~~~~~~ 73 (305)
T 2reo_A 50 LILATYPKSGTTWMHEILDMILND 73 (305)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHC-
T ss_pred EEEEecCCchHHHHHHHHHHHHcC
Confidence 689999999999999999999876
No 17
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human cytosolic sulfotransferase, resveratrol, SGC, cytoplasm, lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens} PDB: 2z5f_A*
Probab=93.60 E-value=0.015 Score=47.99 Aligned_cols=24 Identities=21% Similarity=0.465 Sum_probs=21.4
Q ss_pred eEEEEeeccCchhHHHhhccCCCc
Q 029195 100 FAILSMQRSGSGWFETLLNNHTNI 123 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsHpnI 123 (197)
-.|+|+|||||+|++++|.+|.+.
T Consensus 43 i~i~s~PKSGTTwl~~il~~i~~~ 66 (298)
T 3ckl_A 43 IVIATYPKSGTTWVSEIIDMILND 66 (298)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCchHHHHHHHHHHHhC
Confidence 589999999999999999997654
No 18
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA pesticide, structural genomics, structural genomics consort transferase; HET: A3P PCI; 1.80A {Homo sapiens} PDB: 2ad1_A*
Probab=93.34 E-value=0.026 Score=46.58 Aligned_cols=27 Identities=22% Similarity=0.610 Sum_probs=22.6
Q ss_pred eEEEEeeccCchhHHHhhccCCCcccCccc
Q 029195 100 FAILSMQRSGSGWFETLLNNHTNISSNGEV 129 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsHpnIsSnGEi 129 (197)
..|+|+|||||+|++++|.. |..+||.
T Consensus 44 i~i~s~PKSGTTWl~~il~~---i~~~~~~ 70 (298)
T 2gwh_A 44 LLISTYPKAGTTWTQEIVEL---IQNEGDV 70 (298)
T ss_dssp EEEEESTTSSHHHHHHHHHH---HHTTSCH
T ss_pred EEEEecCCccHHHHHHHHHH---HHcCCCc
Confidence 57999999999999999996 5556663
No 19
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens} SCOP: c.37.1.5
Probab=93.10 E-value=0.025 Score=48.66 Aligned_cols=28 Identities=18% Similarity=0.420 Sum_probs=23.8
Q ss_pred eeEEEEeeccCchhHHHhhccCCCcccCccc
Q 029195 99 YFAILSMQRSGSGWFETLLNNHTNISSNGEV 129 (197)
Q Consensus 99 ~FailsmqRSGs~wfetlLnsHpnIsSnGEi 129 (197)
-+.|+|+|||||+|++++|..|.+ +||.
T Consensus 47 di~Ivg~PKSGTTwl~~iL~~i~~---~ge~ 74 (350)
T 1q1q_A 47 DIFIITYPKSGTTWMIEIICLILK---EGDP 74 (350)
T ss_dssp CEEEEECTTSSHHHHHHHHHHHHT---TTCT
T ss_pred CEEEECCCCChHHHHHHHHHHHHh---CCCC
Confidence 479999999999999999999654 5654
No 20
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND; 1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A* 2qp3_A* 2qp4_A* 1efh_A*
Probab=92.25 E-value=0.047 Score=44.69 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=19.9
Q ss_pred eeEEEEeeccCchhHHHhhcc
Q 029195 99 YFAILSMQRSGSGWFETLLNN 119 (197)
Q Consensus 99 ~FailsmqRSGs~wfetlLns 119 (197)
-+.|+|+|||||+|++++|..
T Consensus 44 di~iv~~PKsGTTwl~~il~~ 64 (293)
T 1j99_A 44 DVIILTYPKSGTNWLAEILCL 64 (293)
T ss_dssp CEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEccCCChHHHHHHHHHH
Confidence 488999999999999999998
No 21
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein structure initiative, structural genomics consortium, SGC, alternative splicing; HET: A3P; 1.80A {Homo sapiens} SCOP: c.37.1.5
Probab=92.09 E-value=0.029 Score=46.30 Aligned_cols=24 Identities=13% Similarity=0.448 Sum_probs=21.2
Q ss_pred eEEEEeeccCchhHHHhhccCCCc
Q 029195 100 FAILSMQRSGSGWFETLLNNHTNI 123 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsHpnI 123 (197)
..|+|+|||||+|++++|..|.+.
T Consensus 42 i~i~s~PKsGTTwl~~il~~i~~~ 65 (296)
T 3bfx_A 42 LLICTYPKAGTTWIQEIVDMIEQN 65 (296)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHT
T ss_pred EEEEecccccHHHHHHHHHHHHhC
Confidence 589999999999999999986554
No 22
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston bacterial structural genomics initiative, BSGI, UN function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A 2ovf_A*
Probab=89.87 E-value=0.063 Score=44.43 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=22.1
Q ss_pred eeEEEEeeccCchhHHHhhccCCCcc
Q 029195 99 YFAILSMQRSGSGWFETLLNNHTNIS 124 (197)
Q Consensus 99 ~FailsmqRSGs~wfetlLnsHpnIs 124 (197)
-..|+|.|||||+|++++|..+.+..
T Consensus 22 di~i~s~PKSGTTWl~~il~~i~~~~ 47 (288)
T 2ov8_A 22 MCWIASYPKAGGHWLRCMLTSYVTGE 47 (288)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 46799999999999999998876543
No 23
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A* 1g3m_A*
Probab=89.29 E-value=0.088 Score=43.63 Aligned_cols=23 Identities=17% Similarity=0.434 Sum_probs=20.3
Q ss_pred eEEEEeeccCchhHHHhhccCCC
Q 029195 100 FAILSMQRSGSGWFETLLNNHTN 122 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsHpn 122 (197)
..|+|+|||||+|++++|..+.+
T Consensus 43 i~i~s~PKsGTTWl~~il~~i~~ 65 (297)
T 1aqu_A 43 LVIATYPKSGTTWISEVVYMIYK 65 (297)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHT
T ss_pred EEEEeCCCcchHHHHHHHHHHHc
Confidence 58999999999999999987544
No 24
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu genomics, protein structure initiative, center for eukaryot structural genomics; 1.90A {Arabidopsis thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Probab=76.69 E-value=0.9 Score=38.31 Aligned_cols=21 Identities=19% Similarity=0.545 Sum_probs=18.5
Q ss_pred eEEEEeeccCchhHHHhhccC
Q 029195 100 FAILSMQRSGSGWFETLLNNH 120 (197)
Q Consensus 100 FailsmqRSGs~wfetlLnsH 120 (197)
-.|+|.|||||+|+.+++...
T Consensus 68 v~i~syPKsGTTW~~~iv~~i 88 (326)
T 1q44_A 68 IILVTNPKSGTTWLKALVFAL 88 (326)
T ss_dssp EEEECCTTSCCHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHHH
Confidence 579999999999999998753
No 25
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'- diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda} SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A*
Probab=62.53 E-value=2.8 Score=35.99 Aligned_cols=19 Identities=32% Similarity=0.333 Sum_probs=16.5
Q ss_pred eEEEEeeccCchhHHHhhc
Q 029195 100 FAILSMQRSGSGWFETLLN 118 (197)
Q Consensus 100 FailsmqRSGs~wfetlLn 118 (197)
-.|+|-|+|||+|+.+++.
T Consensus 66 v~i~syPKsGTTW~q~iv~ 84 (351)
T 1fmj_A 66 VFVASYQRSGTTMTQELVW 84 (351)
T ss_dssp EEEEESTTSSHHHHHHHHH
T ss_pred EEEEeCCCcchHHHHHHHH
Confidence 3689999999999998874
No 26
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=54.61 E-value=9.8 Score=29.03 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=22.6
Q ss_pred cCCCcccCccc------cchhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEV------FSVKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEi------f~~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|+| ...+..-.++++|+..+-.+..
T Consensus 77 ~HPnV~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~ 115 (155)
T 1wzv_A 77 YHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVN 115 (155)
T ss_dssp CBTTBCTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHH
T ss_pred ccCcCCCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHh
Confidence 49999999997 2334455678877766655443
No 27
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=49.99 E-value=13 Score=28.57 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=21.9
Q ss_pred cCCCcccCcccc------------------chhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVF------------------SVKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif------------------~~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|+|= ..+..-.+|++|+..+-.+..
T Consensus 78 ~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~ 128 (165)
T 2ucz_A 78 LHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLS 128 (165)
T ss_dssp SCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHh
Confidence 499999999972 223345677777766655543
No 28
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=46.47 E-value=17 Score=27.54 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=22.6
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|+|=. .+..-.++++|+..+-.+..
T Consensus 77 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~ 114 (152)
T 2aak_A 77 FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 114 (152)
T ss_dssp CCTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHT
T ss_pred ccCCCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHh
Confidence 3999999999732 24455677777766655544
No 29
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=45.57 E-value=11 Score=29.61 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=22.2
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|+|=. .+..-.+|++|+..+-.+..
T Consensus 77 ~HPNI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~ 114 (169)
T 1ayz_A 77 FHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFN 114 (169)
T ss_dssp CCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHT
T ss_pred ccCCCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHh
Confidence 3999999999732 23445677777766555543
No 30
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=44.68 E-value=11 Score=28.64 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=19.4
Q ss_pred CCCcccCccccc-----hhhhhhcHHHHHHHHHh
Q 029195 120 HTNISSNGEVFS-----VKVRRSNASTIVETLDK 148 (197)
Q Consensus 120 HpnIsSnGEif~-----~~~Rr~nissi~~tlD~ 148 (197)
||||.++|+|=. .+..-.++++|+..+-.
T Consensus 78 HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ 111 (151)
T 4gpr_A 78 HPNINKNGVICLDILKDQWSPALTLSRVLLSISS 111 (151)
T ss_dssp BTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHH
T ss_pred cceECCCCEEEcccccCCCCCCCcHHHHHHHHHH
Confidence 999999999742 33445567766655433
No 31
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=43.26 E-value=12 Score=28.34 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=21.1
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|=. .+..-.++++|+..+-.+.
T Consensus 74 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 110 (149)
T 2r0j_A 74 YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL 110 (149)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEechhcCCCCCCCCcHHHHHHHHHHHH
Confidence 4999999999732 2345566777765554443
No 32
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=42.70 E-value=13 Score=27.51 Aligned_cols=12 Identities=42% Similarity=0.814 Sum_probs=10.5
Q ss_pred cCCCcccCcccc
Q 029195 119 NHTNISSNGEVF 130 (197)
Q Consensus 119 sHpnIsSnGEif 130 (197)
-||||.++|+|=
T Consensus 80 ~HPnv~~~G~iC 91 (125)
T 2fo3_A 80 KHTHVYSNGDIC 91 (125)
T ss_dssp CBTTBCTTSBBC
T ss_pred CCCcCCCCCEEE
Confidence 599999999973
No 33
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=42.69 E-value=12 Score=28.55 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=20.3
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKI 149 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~v 149 (197)
-||||..+|+|=. .+..-.++++|+..+-.+
T Consensus 78 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 113 (155)
T 1jat_A 78 YHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQAL 113 (155)
T ss_dssp CBTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEchhhccCCCCCCCHHHHHHHHHHH
Confidence 3999999999732 344456677776554433
No 34
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=42.52 E-value=11 Score=29.28 Aligned_cols=28 Identities=21% Similarity=0.307 Sum_probs=17.6
Q ss_pred cCCCcccCccc----cch---hhhhhcHHHHHHHH
Q 029195 119 NHTNISSNGEV----FSV---KVRRSNASTIVETL 146 (197)
Q Consensus 119 sHpnIsSnGEi----f~~---~~Rr~nissi~~tl 146 (197)
-||||.++|++ ++. +..-.++++|+..+
T Consensus 98 ~HPNV~~~G~icisCL~iL~~WsP~~ti~~vL~sI 132 (156)
T 2q0v_A 98 EMSCVDNCGRVIKNNLHILKNWNRNYTIETILISL 132 (156)
T ss_dssp CCTTBCTTSBBCGGGSHHHHTCCTTCCHHHHHHHH
T ss_pred ccCCCccCCeEehhhcccccCCCCcCcHHHHHHHH
Confidence 49999999998 443 33344555554443
No 35
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=42.02 E-value=14 Score=28.48 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=21.1
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|=. .+..-.++++|+..+-.+.
T Consensus 86 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 122 (158)
T 1zdn_A 86 FHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLL 122 (158)
T ss_dssp CCTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHH
Confidence 4999999999732 3444566777765554443
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=40.02 E-value=23 Score=26.95 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=21.9
Q ss_pred cCCCcccCcccc------chhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVF------SVKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif------~~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|+|= ..+..-.++++|+..+-.+..
T Consensus 75 ~HPnv~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~ 113 (154)
T 1c4z_D 75 YHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVN 113 (154)
T ss_dssp CCTTBCTTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHc
Confidence 499999999972 234445567777766555443
No 37
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=40.01 E-value=15 Score=27.87 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=21.1
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|=. .+..-.++++|+..+-.+.
T Consensus 77 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 113 (150)
T 1z2u_A 77 YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 113 (150)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccCcCCCCCeEeeccccCCCCCCCCHHHHHHHHHHHh
Confidence 4999999999732 2344566777765554443
No 38
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Probab=39.26 E-value=10 Score=33.13 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=17.7
Q ss_pred eeEEEEeeccCchhHHHhhcc
Q 029195 99 YFAILSMQRSGSGWFETLLNN 119 (197)
Q Consensus 99 ~FailsmqRSGs~wfetlLns 119 (197)
--.|+|-|+|||+|+..++..
T Consensus 38 DV~lvSYPKSGTTW~q~Il~~ 58 (319)
T 3mgb_A 38 IRWIASYPKAGNTWVRCMLAA 58 (319)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHH
Confidence 457899999999999987754
No 39
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=38.34 E-value=16 Score=28.25 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=21.5
Q ss_pred cCCCcccCccc-cch----hhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEV-FSV----KVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEi-f~~----~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+| ++. +..-.++++|+..+-.+.
T Consensus 77 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 113 (160)
T 1y8x_A 77 YHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLF 113 (160)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccCcCCCCCeEEcccchhhccCCCCHHHHHHHHHHHH
Confidence 49999999997 332 334557777766655544
No 40
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=37.04 E-value=16 Score=27.48 Aligned_cols=11 Identities=36% Similarity=0.567 Sum_probs=9.8
Q ss_pred cCCCcccC-ccc
Q 029195 119 NHTNISSN-GEV 129 (197)
Q Consensus 119 sHpnIsSn-GEi 129 (197)
-||||..+ |++
T Consensus 83 ~HPnv~~~~G~i 94 (138)
T 1jat_B 83 NLPCVNPTTGEV 94 (138)
T ss_dssp CCTTBCTTTCBB
T ss_pred ccCCEeCCCCEE
Confidence 49999997 998
No 41
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=36.90 E-value=22 Score=27.24 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=22.3
Q ss_pred cCCCcccCcccc----c---hhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVF----S---VKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif----~---~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|++- . .+..-.++++|+..+-.+..
T Consensus 82 ~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~ 121 (157)
T 2gjd_A 82 YHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLD 121 (157)
T ss_dssp CCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHT
T ss_pred ccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHh
Confidence 499999999972 2 24455677777766655543
No 42
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=36.82 E-value=17 Score=28.88 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=21.4
Q ss_pred cCCCcccCcccc-c----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVF-S----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif-~----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|++= + .+..-.++++|+..+-.+.
T Consensus 97 ~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll 133 (180)
T 2nvu_C 97 YHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLF 133 (180)
T ss_dssp CBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHH
Confidence 499999999973 2 2344557777766555444
No 43
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=36.61 E-value=6.2 Score=24.76 Aligned_cols=13 Identities=31% Similarity=1.017 Sum_probs=11.0
Q ss_pred eEeeeEeeccccc
Q 029195 39 YICSVCVKQISAR 51 (197)
Q Consensus 39 yic~i~~kqi~~~ 51 (197)
|||-+|+++.+..
T Consensus 6 FiCP~C~~~l~s~ 18 (34)
T 3mjh_B 6 FICPQCMKSLGSA 18 (34)
T ss_dssp EECTTTCCEESSH
T ss_pred cCCcHHHHHcCCH
Confidence 8999999998754
No 44
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=35.35 E-value=23 Score=27.06 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=21.6
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||..+|+|=. .+..-.++++|+..+-.+.
T Consensus 82 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll 118 (156)
T 2e2c_A 82 WHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLL 118 (156)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHT
T ss_pred ccCCCccCceEECccccccCCCCCcHHHHHHHHHHHH
Confidence 3999999999732 2344567777766655544
No 45
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=33.78 E-value=22 Score=27.08 Aligned_cols=11 Identities=36% Similarity=0.721 Sum_probs=10.0
Q ss_pred CCCcccCcccc
Q 029195 120 HTNISSNGEVF 130 (197)
Q Consensus 120 HpnIsSnGEif 130 (197)
||||.++|+|=
T Consensus 100 HPNV~~~G~IC 110 (136)
T 2a7l_A 100 HPHVYSNGHIC 110 (136)
T ss_dssp BTTBCTTCBBC
T ss_pred CccCCCCCeEE
Confidence 99999999973
No 46
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=33.74 E-value=21 Score=27.79 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=21.2
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|=. .+..-.+|++|+..+-.+.
T Consensus 92 ~HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll 128 (165)
T 2c4o_A 92 YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 128 (165)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred cCCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHH
Confidence 3999999999732 2344566777766555444
No 47
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=33.66 E-value=21 Score=27.88 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=20.2
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|=. .+..-.+|++|+..+-.+.
T Consensus 94 ~HPNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll 130 (166)
T 2ayv_A 94 YHPNINSQGAICLDILKDQWSPALTISKVLLSISSLL 130 (166)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred cCCcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHH
Confidence 3999999999732 2334456777665554443
No 48
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=33.43 E-value=23 Score=27.24 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=21.9
Q ss_pred cCCCcccCccccc-------hhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVFS-------VKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif~-------~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|++-. .+..-.++++|+..+-.+..
T Consensus 85 ~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~ 124 (161)
T 2grr_A 85 FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLN 124 (161)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHh
Confidence 3999999999732 24445577777766555443
No 49
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=31.83 E-value=24 Score=27.04 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=20.2
Q ss_pred CCCcccCcccc------------------chhhhhhcHHHHHHHHHhhh
Q 029195 120 HTNISSNGEVF------------------SVKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 120 HpnIsSnGEif------------------~~~~Rr~nissi~~tlD~vy 150 (197)
||||..+|++= ..+..-.+|++|+..+-.+.
T Consensus 78 HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll 126 (164)
T 3h8k_A 78 HPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSML 126 (164)
T ss_dssp CTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHH
T ss_pred cCCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHH
Confidence 99999999883 22344556777765554443
No 50
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=31.35 E-value=25 Score=28.13 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=21.5
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|=. .+..-.+|++|+..+-.+.
T Consensus 106 ~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 142 (190)
T 3o2u_A 106 FHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLF 142 (190)
T ss_dssp CCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHH
Confidence 4999999999843 2445667777765554443
No 51
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=29.87 E-value=24 Score=26.66 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=20.5
Q ss_pred cCCCccc-Cccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISS-NGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsS-nGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.+ +|+|=. .+..-.++++|+..+-.+.
T Consensus 75 ~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 112 (149)
T 1fxt_A 75 YHPNISSVTGAICLDILKNAWSPVITLKSALISLQALL 112 (149)
T ss_dssp CBTTBCSSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCcCCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHH
Confidence 4999998 999732 2334556776665554444
No 52
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=29.20 E-value=84 Score=20.23 Aligned_cols=57 Identities=11% Similarity=0.155 Sum_probs=38.8
Q ss_pred ceeeEEEEeeccCchhHHHhhccCCCcccCccccchhh-----hhhcHHHHHHHHH-hhhccc
Q 029195 97 VRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKV-----RRSNASTIVETLD-KIYNLD 153 (197)
Q Consensus 97 vr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~-----Rr~nissi~~tlD-~vynlD 153 (197)
+.-|+-++.......-|...|..+|+|..--.+-..+| +-.+..++-+.++ ++..++
T Consensus 2 v~a~v~v~~~~~~~~~~~~~l~~~peV~~~~~vtG~~d~l~~v~~~d~~~l~~~~~~~l~~~~ 64 (83)
T 2zbc_A 2 ASAIVLINTDAGGEDEVFERLKSMSEVTEVHVVYGVYDIVVKVEADSMDKLKDFVTNTIRKLP 64 (83)
T ss_dssp CEEEEEEEESTTCHHHHHHHHTTCTTEEEEEECSSSCSEEEEEECSSHHHHHHHHHHTGGGST
T ss_pred eEEEEEEEEcCCCHHHHHHHHhCCCCeEEEEEEeccCCEEEEEEECCHHHHHHHHHHHhcCCC
Confidence 34567777766555778899999999987555554444 6677777776664 555543
No 53
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=28.42 E-value=29 Score=26.96 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=21.2
Q ss_pred cCCCcccCcccc---------chhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVF---------SVKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif---------~~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|= ..+..-.+|++|+..+-.+.
T Consensus 77 ~HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll 117 (169)
T 1yh2_A 77 YHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLM 117 (169)
T ss_dssp CBTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHH
T ss_pred ccccCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHH
Confidence 499999999962 23445567777765554443
No 54
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=27.81 E-value=30 Score=27.06 Aligned_cols=12 Identities=42% Similarity=0.714 Sum_probs=10.3
Q ss_pred cCCCcccCcccc
Q 029195 119 NHTNISSNGEVF 130 (197)
Q Consensus 119 sHpnIsSnGEif 130 (197)
-||||..+|+|=
T Consensus 91 ~HPNV~~~G~IC 102 (172)
T 2awf_A 91 WHPNVDKNGDVC 102 (172)
T ss_dssp CCTTBCTTCBBC
T ss_pred ccCCCCCCCcEe
Confidence 499999999973
No 55
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=27.68 E-value=83 Score=20.78 Aligned_cols=58 Identities=10% Similarity=0.039 Sum_probs=40.5
Q ss_pred ceeeEEEEeeccCchhHHHhhccCCCcccCccccchhh-----hhhcHHHHHHHHH-hhhcccc
Q 029195 97 VRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKV-----RRSNASTIVETLD-KIYNLDW 154 (197)
Q Consensus 97 vr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~-----Rr~nissi~~tlD-~vynlDW 154 (197)
+.-|+-++++.....-|...|..+|+|..--.+-..+| +-.++.++.+.++ ++..++-
T Consensus 2 v~A~v~v~~~~~~~~~~~~~l~~~peV~e~~~vtG~~D~ll~v~~~d~~~l~~~i~~~l~~~~g 65 (83)
T 2cvi_A 2 VTAFILMVTAAGKEREVMEKLLAMPEVKEAYVVYGEYDLIVKVETDTLKDLDQFITEKIRKMPE 65 (83)
T ss_dssp EEEEEEEEECTTCHHHHHHHHHTSTTEEEEEECBSSCSEEEEEEESSHHHHHHHHHTTGGGCTT
T ss_pred EEEEEEEEEcCCCHHHHHHHHhCCCCeeEEEEEcccCCEEEEEEECCHHHHHHHHHHHhccCCC
Confidence 34577777776666789999999999986544444444 6778888877775 5555543
No 56
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=27.67 E-value=19 Score=27.16 Aligned_cols=12 Identities=42% Similarity=0.814 Sum_probs=10.6
Q ss_pred cCCCcccCcccc
Q 029195 119 NHTNISSNGEVF 130 (197)
Q Consensus 119 sHpnIsSnGEif 130 (197)
-||||.++|+|=
T Consensus 94 ~HPnv~~~G~IC 105 (136)
T 2h2y_A 94 KHTHVYSNGDIC 105 (136)
T ss_dssp CCTTBCTTCCBC
T ss_pred CCCcCCCCCEEE
Confidence 599999999983
No 57
>1yjd_C TP44, T-cell-specific surface glycoprotein CD28; IGSF, CD28 homodimer, immune system-signaling protein comple; HET: NAG; 2.70A {Homo sapiens} SCOP: b.1.1.1
Probab=27.63 E-value=37 Score=25.93 Aligned_cols=43 Identities=23% Similarity=0.334 Sum_probs=12.8
Q ss_pred heeeEeeeEeecccccc---ccccceeeEe-ecCCCCCCCCCCCCCc
Q 029195 36 CGVYICSVCVKQISART---KSEFLNVQVI-ERPCPVPNIEPWEIPY 78 (197)
Q Consensus 36 cGvyic~i~~kqi~~~~---~~~~~~~~v~-e~~c~~~~i~~~e~~y 78 (197)
-|+|+|.+.+-=--... ...-.-+-|+ .++|+++..|+..-||
T Consensus 91 ta~YfCa~~~~~ppp~~~~~~g~GT~l~V~e~~~c~~~~~~~~~~~~ 137 (140)
T 1yjd_C 91 TDIYFCKIEVMYPPPYLDNEKSNGTIIHVKGKHLCPSPLFPGPSKPL 137 (140)
T ss_dssp CEEEEEEEEEEESSSCEEBCCCCCEEEECC-----------------
T ss_pred CEEEEEEEEecCCCceeeeecCCCEEEEEEeccCCCCCCCCCCCCCC
Confidence 58999999882211001 1112223344 4679877665544443
No 58
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=26.88 E-value=50 Score=26.21 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=22.0
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi~~tlD~vyn 151 (197)
-||||.++|+|=. .+..-.+|++|+..+-.+..
T Consensus 103 ~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~ 140 (179)
T 1i7k_A 103 YHPNVDTQGNISLDILKEKWSALYDVRTILLSIQSLLG 140 (179)
T ss_dssp CSTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHH
T ss_pred ccCccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHh
Confidence 4999999999732 23445667777666555543
No 59
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=26.79 E-value=36 Score=26.49 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=21.8
Q ss_pred cCCCcccCccccch-------hhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFSV-------KVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~~-------~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|=.. +..-.+|++|+..+-.+.
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll 126 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLL 126 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHH
Confidence 49999999987332 444557777766655554
No 60
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=26.45 E-value=32 Score=30.74 Aligned_cols=45 Identities=27% Similarity=0.317 Sum_probs=32.5
Q ss_pred eeccCchhHHHhhccCCCcccCccccchh----hhhhcHHHHHHHHHhh
Q 029195 105 MQRSGSGWFETLLNNHTNISSNGEVFSVK----VRRSNASTIVETLDKI 149 (197)
Q Consensus 105 mqRSGs~wfetlLnsHpnIsSnGEif~~~----~Rr~nissi~~tlD~v 149 (197)
|-|+|.-|+|.|=+-.|+|.-+||.-... -=|.-+.++-.+.|-.
T Consensus 1 m~rtg~~y~esl~~~~~~v~~~Ge~v~~v~~hp~~~~~~~~~a~~yD~~ 49 (481)
T 2yyk_A 1 MARTGAEYIEALKTRPPNLWYKGEKVEDPTTHPVFRGIVRTMAALYDLQ 49 (481)
T ss_dssp -CCCHHHHHHHHHHSCCCEEETTEECSCTTTSTTTHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHhcCCCeEEECCEEccCcCCChhhHHHHHHHHHHhCcC
Confidence 35899999999999889999999976532 1245555666665544
No 61
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=25.89 E-value=34 Score=27.53 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=19.0
Q ss_pred cCCCcccCcccc-ch----hhhhhcHHHHHHHHHh
Q 029195 119 NHTNISSNGEVF-SV----KVRRSNASTIVETLDK 148 (197)
Q Consensus 119 sHpnIsSnGEif-~~----~~Rr~nissi~~tlD~ 148 (197)
-||||.++|+|= +. +..-.+|++|+..+-.
T Consensus 121 ~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ 155 (194)
T 3bzh_A 121 YHCNINSQGVICLDILKDNWSPALTISKVLLSICS 155 (194)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHH
T ss_pred ccceECCCCceechhhhccCCCcCcHHHHHHHHHH
Confidence 499999999973 22 2334566666544433
No 62
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=25.32 E-value=22 Score=27.35 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=21.4
Q ss_pred cCCCcccCccccc-----------hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVFS-----------VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif~-----------~~~Rr~nissi~~tlD~vy 150 (197)
-||||..+|+|=. .+..-.+|++|+..+-.+.
T Consensus 87 ~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll 129 (167)
T 3fn1_B 87 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLF 129 (167)
T ss_dssp CCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTT
T ss_pred ccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHH
Confidence 3999999999832 2334457777766655443
No 63
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=25.22 E-value=67 Score=22.47 Aligned_cols=39 Identities=26% Similarity=0.418 Sum_probs=17.6
Q ss_pred heeeEeeeEeeccccc-cccccceeeEeecCCCCCCCCCC
Q 029195 36 CGVYICSVCVKQISAR-TKSEFLNVQVIERPCPVPNIEPW 74 (197)
Q Consensus 36 cGvyic~i~~kqi~~~-~~~~~~~~~v~e~~c~~~~i~~~ 74 (197)
-|+|.|.+.-..-... ....-..+.|.+++=..|..|+.
T Consensus 87 sg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~~~~p~~~~~ 126 (129)
T 3rrq_A 87 SGTYLCGAISLAPKLQIKESLRAELRVTERRAEVPTAHPS 126 (129)
T ss_dssp CEEEEEEEEECGGGCEEEECCCEEEEEECCCC--------
T ss_pred CEEEEEEEEecCCCceeeEeceEEEEEecCccccCCCCCC
Confidence 4899998865433221 12344555677766544444444
No 64
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=25.12 E-value=36 Score=27.08 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=20.7
Q ss_pred cCCCccc-Cccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISS-NGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsS-nGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.+ +|+|=. .+..-.+|++|+..+-.+.
T Consensus 81 ~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 118 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALL 118 (201)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHh
Confidence 3999996 898742 3345567777765554443
No 65
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=25.01 E-value=23 Score=27.07 Aligned_cols=32 Identities=13% Similarity=0.222 Sum_probs=21.3
Q ss_pred cCCCcccCcccc-----chhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISSNGEVF-----SVKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsSnGEif-----~~~~Rr~nissi~~tlD~vy 150 (197)
-||||.++|+|= ..+..-.+|++|+..+-.+.
T Consensus 78 ~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 114 (154)
T 2c2v_B 78 YHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALL 114 (154)
T ss_dssp CCTTBCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHT
T ss_pred ccCcCccCCeEEchhccCCCCCCCcHHHHHHHHHHHH
Confidence 499999999973 23445667777765554443
No 66
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=24.18 E-value=27 Score=32.03 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=32.3
Q ss_pred ccCchhHHHhhccCCCcccCccccchhhhhhcHHHHHHHHHhhhccc
Q 029195 107 RSGSGWFETLLNNHTNISSNGEVFSVKVRRSNASTIVETLDKIYNLD 153 (197)
Q Consensus 107 RSGs~wfetlLnsHpnIsSnGEif~~~~Rr~nissi~~tlD~vynlD 153 (197)
|+|.-|+|.|-+- ++|..+||.-...----.+.-.++++.++|++-
T Consensus 2 ~Tg~~Y~esL~d~-r~vy~~Ge~V~dvt~hP~f~~~~~~~a~~yD~~ 47 (515)
T 3hwc_A 2 RTGKQYLESLNDG-RVVWVGNEKIDNVATHPLTRDYAERVAQFYDLH 47 (515)
T ss_dssp CCHHHHHHHTCSC-CEEEETTEEESCTTTCTTTHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHccC-CeEEECCEEccCCCCChhhHHHHHHHHHHHHHh
Confidence 7899999998776 999999998743322333455566666666653
No 67
>2oqt_A Hypothetical protein SPY0176; APC29699, putative PTS IIA domain, streptococcus pyogenes M1 GAS, structural genomics, PSI-2; 2.41A {Streptococcus pyogenes serotype M1}
Probab=23.98 E-value=22 Score=26.48 Aligned_cols=81 Identities=11% Similarity=0.117 Sum_probs=52.6
Q ss_pred ecCCCCC-CCCCCCCCceeCCCCCccCCCccccCCceeeEEEEeeccCchhHHHhhccCCCcccCccccchhhhhhcHHH
Q 029195 63 ERPCPVP-NIEPWEIPYVHYPKPKTYSRAECACNPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKVRRSNAST 141 (197)
Q Consensus 63 e~~c~~~-~i~~~e~~yvHyP~P~tysR~ECacnPvr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~Rr~niss 141 (197)
=.++... .+...-+-.++.++|-.|. ++ .||+.+..++.+.. ...++.+|..=-.+.+|.+......+-.+..+
T Consensus 67 iPH~~~~~~v~~~~i~i~~l~~pI~~~-d~---~~V~~if~la~~~~-~~hl~~~l~~l~~~l~d~~~~~~L~~~~~~~e 141 (162)
T 2oqt_A 67 MPHAEAGLGVNRNAFALITLTKPVTFS-DG---KEVSVLLTLAATDP-SIHTTVAIPQIVALFELDNAIERLVACQSPKE 141 (162)
T ss_dssp CCCCCC-CCBSSCEECEEEEEEEEECT-TS---CEEEEECCEECSST-THHHHTHHHHHHHHHTSTTHHHHHHTCCSHHH
T ss_pred EEccCcccCcccceEEEEEeCCCEECC-CC---CeEEEEEEEeeCCH-HHHHHHHHHHHHHHHcCHHHHHHHHhCCCHHH
Confidence 3344434 4656667788999999997 33 79999999988875 33455455555556667666665555556666
Q ss_pred HHHHHHh
Q 029195 142 IVETLDK 148 (197)
Q Consensus 142 i~~tlD~ 148 (197)
+.+.|.+
T Consensus 142 i~~~l~~ 148 (162)
T 2oqt_A 142 VLEMVEE 148 (162)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6655544
No 68
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=22.78 E-value=44 Score=25.55 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=20.3
Q ss_pred cCCCccc-Cccccc-----hhhhhhcHHHHHHHHHhhh
Q 029195 119 NHTNISS-NGEVFS-----VKVRRSNASTIVETLDKIY 150 (197)
Q Consensus 119 sHpnIsS-nGEif~-----~~~Rr~nissi~~tlD~vy 150 (197)
-||||.+ +|+|=. .+..-.++++|+..+-.+.
T Consensus 84 ~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 121 (159)
T 2bep_A 84 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALL 121 (159)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred CccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHH
Confidence 4999995 898732 2445566777765554443
No 69
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=22.60 E-value=37 Score=30.46 Aligned_cols=46 Identities=17% Similarity=0.156 Sum_probs=34.1
Q ss_pred eeccCchhHHHhhccCCCcccCccccchh----hhhhcHHHHHHHHHhhh
Q 029195 105 MQRSGSGWFETLLNNHTNISSNGEVFSVK----VRRSNASTIVETLDKIY 150 (197)
Q Consensus 105 mqRSGs~wfetlLnsHpnIsSnGEif~~~----~Rr~nissi~~tlD~vy 150 (197)
|-|+|.-|+|.|=+-.|+|.-+||.-... -=|.-+.++-.+.|-.-
T Consensus 1 m~~tg~~y~esl~~~~~~v~~~Ge~v~~v~~hp~~~~~~~~~a~~yD~~~ 50 (490)
T 1u8v_A 1 MLMTAEQYIESLRKLNTRVYMFGEKIENWVDHPMIRPSINCVRMTYELAQ 50 (490)
T ss_dssp CCCCHHHHHHHHTTCCCCEEETTEECSSGGGCTTTHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCeEEECCEEcCCcCCCchhHHHHHHHHHHhCcCC
Confidence 45899999999998889999999976532 13555666666666554
No 70
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=22.41 E-value=76 Score=24.93 Aligned_cols=33 Identities=27% Similarity=0.285 Sum_probs=22.6
Q ss_pred cCCCcccCcccc------------------chhhhhhcHHHHHHHHHhhhc
Q 029195 119 NHTNISSNGEVF------------------SVKVRRSNASTIVETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif------------------~~~~Rr~nissi~~tlD~vyn 151 (197)
-||||..+|++= ..+..-.+|++|+..+-.+..
T Consensus 81 ~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~ 131 (183)
T 3rz3_A 81 WHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLN 131 (183)
T ss_dssp CCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHh
Confidence 499999999873 234456678877766655443
No 71
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, thermus thermophilus HB8, NPPSFA; 2.40A {Thermus thermophilus}
Probab=21.41 E-value=49 Score=22.30 Aligned_cols=56 Identities=9% Similarity=0.116 Sum_probs=39.1
Q ss_pred ceeeEEEEeeccCchhHHHhhccCCCcccCccccchhh-----hhhcHHHHHHHH-Hhhhcc
Q 029195 97 VRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKV-----RRSNASTIVETL-DKIYNL 152 (197)
Q Consensus 97 vr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~-----Rr~nissi~~tl-D~vynl 152 (197)
+.-|+-+++......-|...|.++|+|..--.+-..+| +-.|..++-+.+ |++..+
T Consensus 2 v~A~v~v~~~~~~~~~~~~~l~~~peV~~~~~vtG~~D~ll~v~~~d~~~l~~~l~~~l~~~ 63 (92)
T 2djw_A 2 ITAFVLIRPRGNRVQALGEAIAELPQVAEVYSVTGPYDLVALVRLKDVEELDDVVTQGILSL 63 (92)
T ss_dssp EEEEEEEEECGGGHHHHHHHHTTSTTEEEEEEESSSSSEEEEEEESSGGGHHHHCCCCCTTS
T ss_pred EEEEEEEEEcCCCHHHHHHHHhcCCCeEEEEEeecCCCEEEEEEECCHHHHHHHHHHhcccC
Confidence 34577777776556778899999999988766666655 566777776655 455444
No 72
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=21.15 E-value=1.1e+02 Score=22.12 Aligned_cols=58 Identities=16% Similarity=0.093 Sum_probs=39.7
Q ss_pred CceeeEEEEeeccCchhHHHhhccCCCcccCccccchhh-----hhhcHHHHHHHHHhhhccc
Q 029195 96 PVRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKV-----RRSNASTIVETLDKIYNLD 153 (197)
Q Consensus 96 Pvr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~-----Rr~nissi~~tlD~vynlD 153 (197)
++..|+-++.+...-.-|...|..+|+|...=.+-..+| +-.+..++.+.+|++..++
T Consensus 66 ~~~a~v~v~~~~~~~~~~~~~l~~~p~V~~~~~~tG~~d~~~~v~~~d~~~l~~~~~~l~~~~ 128 (151)
T 2cyy_A 66 SMLAFILVKVKAGKYSEVASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDLIGSIP 128 (151)
T ss_dssp CEEEEEEEEECTTCHHHHHHHHHTCTTEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHTST
T ss_pred cEEEEEEEEECcccHHHHHHHHhcCCCeeEeeEecCCCCEEEEEEECCHHHHHHHHHHHhCCC
Confidence 455677788887777789999999999986544433333 4556666666666665553
No 73
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=20.95 E-value=1e+02 Score=22.29 Aligned_cols=56 Identities=11% Similarity=0.161 Sum_probs=37.5
Q ss_pred CCceeeEEEEeeccCchhHHHhhccCCCcccCccccchhh-----hhhcHHHHHHHHHhhh
Q 029195 95 NPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKV-----RRSNASTIVETLDKIY 150 (197)
Q Consensus 95 nPvr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~-----Rr~nissi~~tlD~vy 150 (197)
-|+..|+.++.+...-.-|...|..+|+|...-.+-..+| +-.+..++.+.++++.
T Consensus 63 ~~~~a~v~v~~~~~~~~~~~~~l~~~p~V~~~~~~tG~~d~~~~v~~~~~~~l~~~~~~l~ 123 (144)
T 2cfx_A 63 LPVSCIVEATVKNADYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEAVEDFINKTS 123 (144)
T ss_dssp CCEEEEEEEEEGGGCHHHHHHHHHTCTTEEEEEEEESSSSEEEEEEESSHHHHHHHHHHHT
T ss_pred ceEEEEEEEEECcccHHHHHHHHhcChhhheeeeeeCCCCEEEEEEECCHHHHHHHHHHhc
Confidence 4566777788877666788899999999975544433332 4556666666666553
No 74
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=20.75 E-value=35 Score=31.14 Aligned_cols=41 Identities=20% Similarity=0.447 Sum_probs=25.4
Q ss_pred HHHHHHHhhhccc----------cccccccchhhhhhh--hHHHHhhHHHHHH
Q 029195 141 TIVETLDKIYNLD----------WFSSASKNECTAAVG--LKWMLNQVRLLYW 181 (197)
Q Consensus 141 si~~tlD~vynlD----------W~sSAsKNectaA~G--fKWMlnQG~m~y~ 181 (197)
+.++.||+.|+|+ |+.-|-||....+.. -+|+..||-|.|.
T Consensus 513 ~~~~~l~~~y~~~~~~n~ei~~~w~~~~~~~~~~~~~~~~~~~l~~~gr~k~~ 565 (608)
T 3u9w_A 513 GHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDAIPLALKMATEQGRMKFT 565 (608)
T ss_dssp HHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCChhhHHHHHHHHHHcCCCEEe
Confidence 4568899999974 333334444443332 3778888888554
No 75
>2a0j_A PTS system, nitrogen regulatory IIA protein; nitrogen regulation, structural genomics, OPPF, oxford prote production facility; 2.50A {Neisseria meningitidis}
Probab=20.73 E-value=22 Score=25.66 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=46.7
Q ss_pred CCCCCCCCCceeCCCCCccCCCccccCCceeeEEEEeeccCchhHHHhhccCCCcccCccccchhhhhhcHHHHHHH
Q 029195 69 PNIEPWEIPYVHYPKPKTYSRAECACNPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEVFSVKVRRSNASTIVET 145 (197)
Q Consensus 69 ~~i~~~e~~yvHyP~P~tysR~ECacnPvr~FailsmqRSGs~wfetlLnsHpnIsSnGEif~~~~Rr~nissi~~t 145 (197)
..+...-+-+++.++|-.|...+ -.||+.+..++.+...+.-.-.+|..=-.+.++.+.......-.+..++.+.
T Consensus 71 ~~v~~~~i~i~~l~~pi~~~~~d--~~~V~~if~l~~~~~~~~~hl~~l~~l~~~l~~~~~~~~L~~~~~~~ei~~~ 145 (149)
T 2a0j_A 71 AGVKQATGAFIRTREPVGFDAPD--GKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAI 145 (149)
T ss_dssp TTCCSCEEEEEEEEEEECCCCTT--SCCEEEEEEEEEESSCHHHHHHHHHHHHHHHTCHHHHHHHHHCCSHHHHHHH
T ss_pred cccCCCEEEEEEeCCCcccCCCC--CCeeEEEEEEEcCCcchHHHHHHHHHHHHHHCCHHHHHHHHhCCCHHHHHHH
Confidence 44555556678889999987432 2599999999998875554455555544455555554444444444555443
No 76
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=20.47 E-value=30 Score=26.76 Aligned_cols=33 Identities=15% Similarity=0.310 Sum_probs=20.6
Q ss_pred cCCCcccCccccc-----hhhhhhcHHHH-HHHHHhhhc
Q 029195 119 NHTNISSNGEVFS-----VKVRRSNASTI-VETLDKIYN 151 (197)
Q Consensus 119 sHpnIsSnGEif~-----~~~Rr~nissi-~~tlD~vyn 151 (197)
-||||.++|+|=. .+..-.+++++ ++.+..+..
T Consensus 95 ~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~ 133 (167)
T 4ds2_A 95 YSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFS 133 (167)
T ss_dssp CCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHT
T ss_pred ccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHh
Confidence 4999999999843 23345566553 444555544
No 77
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=20.38 E-value=48 Score=26.07 Aligned_cols=28 Identities=25% Similarity=0.256 Sum_probs=17.3
Q ss_pred cCCCcc-cCcccc----c---hhhhhhcHHHHHHHH
Q 029195 119 NHTNIS-SNGEVF----S---VKVRRSNASTIVETL 146 (197)
Q Consensus 119 sHpnIs-SnGEif----~---~~~Rr~nissi~~tl 146 (197)
-||||. .+|+|= + .+..-.+|++|+..+
T Consensus 112 ~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI 147 (170)
T 2hlw_A 112 NMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQEL 147 (170)
T ss_dssp CCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHH
T ss_pred ccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHH
Confidence 499998 799973 2 233444555554443
Done!