Your job contains 1 sequence.
>029198
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD
YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET
DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
GSGIQVTQLGHVKVRKL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029198
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2203028 - symbol:CRB "chloroplast RNA binding"... 939 2.3e-94 1
TAIR|locus:2099222 - symbol:CSP41A "AT3G63140" species:37... 282 9.7e-25 1
TAIR|locus:2025192 - symbol:AT1G75280 species:3702 "Arabi... 120 2.1e-05 1
UNIPROTKB|Q81JK7 - symbol:BA_5697 "Uncharacterized protei... 115 8.0e-05 1
TIGR_CMR|BA_5697 - symbol:BA_5697 "conserved hypothetical... 115 8.0e-05 1
UNIPROTKB|Q71YS4 - symbol:LMOf2365_1769 "Putative unchara... 113 0.00014 1
TAIR|locus:2025197 - symbol:AT1G75290 species:3702 "Arabi... 113 0.00017 1
>TAIR|locus:2203028 [details] [associations]
symbol:CRB "chloroplast RNA binding" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0010319 "stromule" evidence=IDA] [GO:0042631 "cellular response
to water deprivation" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP;RCA] [GO:0042742 "defense response to bacterium"
evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=IEP;IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0005840 "ribosome" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=IGI;RCA] [GO:0048046 "apoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0032544 "plastid translation"
evidence=IMP] [GO:0045727 "positive regulation of translation"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA;IMP] [GO:0005996 "monosaccharide
metabolic process" evidence=IMP] [GO:0010297 "heteropolysaccharide
binding" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0006636 "unsaturated fatty
acid biosynthetic process" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0010218 "response to
far red light" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0043085 "positive regulation of
catalytic activity" evidence=RCA] [GO:0043900 "regulation of
multi-organism process" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005773 GO:GO:0045893
GO:GO:0009611 GO:GO:0005777 GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0007623
GO:GO:0000272 GO:GO:0009409 GO:GO:0042742 GO:GO:0009941
GO:GO:0009658 GO:GO:0003723 GO:GO:0005840 GO:GO:0010287
GO:GO:0045727 GO:GO:0019843 GO:GO:0010319 GO:GO:0042631
GO:GO:0006364 HOGENOM:HOG000232785 ProtClustDB:PLN00016
GO:GO:0032544 EMBL:Y10557 EMBL:Y15382 EMBL:AC006416 EMBL:AY070022
EMBL:AF428282 EMBL:AY035050 EMBL:AF325043 EMBL:AY062570
EMBL:AY087609 IPI:IPI00548101 PIR:E86226 PIR:T51863 PIR:T52072
RefSeq:NP_172405.1 UniGene:At.21708 UniGene:At.50307
ProteinModelPortal:Q9SA52 SMR:Q9SA52 STRING:Q9SA52 PaxDb:Q9SA52
PRIDE:Q9SA52 ProMEX:Q9SA52 EnsemblPlants:AT1G09340.1 GeneID:837455
KEGG:ath:AT1G09340 TAIR:At1g09340 InParanoid:Q9SA52 OMA:PTYIYGP
PhylomeDB:Q9SA52 Genevestigator:Q9SA52 GO:GO:0010297 GO:GO:0005996
Uniprot:Q9SA52
Length = 378
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 171/193 (88%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 239 NSGIQISQLGHVK 251
>TAIR|locus:2099222 [details] [associations]
symbol:CSP41A "AT3G63140" species:3702 "Arabidopsis
thaliana" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IGI;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032544 "plastid translation" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009657 "plastid
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0015979
"photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR016040 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0008266
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
GO:GO:0007623 GO:GO:0009941 GO:GO:0009658 GO:GO:0005840
GO:GO:0009534 GO:GO:0010287 GO:GO:0045727 GO:GO:0019843
GO:GO:0010319 GO:GO:0006364 EMBL:AL163816 EMBL:AF428269
EMBL:AY059887 EMBL:AY128804 IPI:IPI00516646 PIR:T48103
RefSeq:NP_191873.1 UniGene:At.48804 UniGene:At.5159
ProteinModelPortal:Q9LYA9 SMR:Q9LYA9 STRING:Q9LYA9 PaxDb:Q9LYA9
PRIDE:Q9LYA9 ProMEX:Q9LYA9 EnsemblPlants:AT3G63140.1 GeneID:825489
KEGG:ath:AT3G63140 TAIR:At3g63140 HOGENOM:HOG000232785
InParanoid:Q9LYA9 OMA:EYVKIGR PhylomeDB:Q9LYA9 ProtClustDB:PLN00016
Genevestigator:Q9LYA9 GO:GO:0032544 Uniprot:Q9LYA9
Length = 406
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 67/195 (34%), Positives = 104/195 (53%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
GG IG + ++ L+ GH VT+ T G ++++ F+E S + G+ +
Sbjct: 90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
V + + + FDVV D NG++ D V P++D + ++QF++ SSAG+Y ++ PH
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V + H + E L NW S RP Y+ G N EEWFF R+ R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262
Query: 179 IPGSGIQVTQLGHVK 193
IPGSG+Q+T + HV+
Sbjct: 263 IPGSGLQLTNISHVR 277
>TAIR|locus:2025192 [details] [associations]
symbol:AT1G75280 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IGI;IEP]
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005737 GO:GO:0046686 GO:GO:0006979
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491 EMBL:AC025814
EMBL:Z49777 EMBL:AY065395 EMBL:AY117175 EMBL:AY084851
IPI:IPI00517618 PIR:C96783 PIR:S57613 RefSeq:NP_565107.1
UniGene:At.18297 ProteinModelPortal:P52577 SMR:P52577 STRING:P52577
PaxDb:P52577 PRIDE:P52577 ProMEX:P52577 EnsemblPlants:AT1G75280.1
GeneID:843865 KEGG:ath:AT1G75280 TAIR:At1g75280 eggNOG:NOG126691
HOGENOM:HOG000237415 InParanoid:P52577 KO:K00224 OMA:VLSINHA
PhylomeDB:P52577 ProtClustDB:CLSN2682501 Genevestigator:P52577
GermOnline:AT1G75280 InterPro:IPR008030 Pfam:PF05368 Uniprot:P52577
Length = 310
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 44/153 (28%), Positives = 75/153 (49%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT +IG FL K GH R +A ++ + G++ Q F + ILH GD D
Sbjct: 11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
++ + ++ K DVV G + D+ + I+ A+ N+++F+ S GV +
Sbjct: 68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119
Query: 116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
T V+P KS GK+ +E++G+ +T
Sbjct: 120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149
>UNIPROTKB|Q81JK7 [details] [associations]
symbol:BA_5697 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
RefSeq:NP_847843.1 RefSeq:YP_022381.1 ProteinModelPortal:Q81JK7
DNASU:1085440 EnsemblBacteria:EBBACT00000011484
EnsemblBacteria:EBBACT00000015136 GeneID:1085440 GeneID:2817090
KEGG:ban:BA_5697 KEGG:bar:GBAA_5697 PATRIC:18789026
BioCyc:BANT261594:GJ7F-5550-MONOMER Uniprot:Q81JK7
Length = 292
Score = 115 (45.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
>TIGR_CMR|BA_5697 [details] [associations]
symbol:BA_5697 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
RefSeq:NP_847843.1 RefSeq:YP_022381.1 ProteinModelPortal:Q81JK7
DNASU:1085440 EnsemblBacteria:EBBACT00000011484
EnsemblBacteria:EBBACT00000015136 GeneID:1085440 GeneID:2817090
KEGG:ban:BA_5697 KEGG:bar:GBAA_5697 PATRIC:18789026
BioCyc:BANT261594:GJ7F-5550-MONOMER Uniprot:Q81JK7
Length = 292
Score = 115 (45.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
>UNIPROTKB|Q71YS4 [details] [associations]
symbol:LMOf2365_1769 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE017262 GenomeReviews:AE017262_GR
RefSeq:YP_014363.1 ProteinModelPortal:Q71YS4 STRING:Q71YS4
GeneID:2799575 KEGG:lmf:LMOf2365_1769 PATRIC:20324823
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
Uniprot:Q71YS4
Length = 291
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGTRF G L LV EGH+VT+ TRGK ++ F + +++ L + +D
Sbjct: 7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY 109
F L+ + +DV+YD E +DA ++++IY SS VY
Sbjct: 56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVY 101
>TAIR|locus:2025197 [details] [associations]
symbol:AT1G75290 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016651 "oxidoreductase activity,
acting on NAD(P)H" evidence=ISS] InterPro:IPR016040 EMBL:CP002684
GO:GO:0000166 Gene3D:3.40.50.720 eggNOG:COG0702
ProtClustDB:CLSN2682501 InterPro:IPR008030 Pfam:PF05368
EMBL:BT033106 IPI:IPI00521965 RefSeq:NP_177664.4 UniGene:At.52521
ProteinModelPortal:B3LFB7 SMR:B3LFB7 PaxDb:B3LFB7 PRIDE:B3LFB7
EnsemblPlants:AT1G75290.1 GeneID:843866 KEGG:ath:AT1G75290
TAIR:At1g75290 OMA:IDEYLSY PhylomeDB:B3LFB7 ArrayExpress:B3LFB7
Genevestigator:B3LFB7 Uniprot:B3LFB7
Length = 318
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT IG + VK GH R +A ++ G++ Q F +F +LH GD D
Sbjct: 11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL-LPHCE 119
++ + ++ K DVV G ILD + + +L S+ + +
Sbjct: 68 HESLVKAI--KQADVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120
Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ V+P KS KL T +E++G+ +T L Y G Y P +L+ G P
Sbjct: 121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP 174
Query: 179 IPGSGIQVTQLGHVK 193
P +++ G+VK
Sbjct: 175 -PRDKVKIFGDGNVK 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.139 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.50 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 594 (63 KB)
Total size of DFA: 169 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.16u 0.11s 20.27t Elapsed: 00:00:01
Total cpu time: 20.16u 0.11s 20.27t Elapsed: 00:00:01
Start: Fri May 10 09:59:05 2013 End: Fri May 10 09:59:06 2013