BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029199
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0W429|FICD_CULQU Adenosine monophosphate-protein transferase FICD homolog OS=Culex
quinquefasciatus GN=CPIJ001789 PE=3 SV=1
Length = 500
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 63 GGDSQGVEEYYKKMVEENPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEIL 122
G D + + + M +P +P L+ Y +FL S+QD+ A+ YY +A+ +P E L
Sbjct: 136 GKDDKALRLFQHAMAL-SPRHPEILTKYGEFLEHSQQDIVTADHYYYQALTVNPSHSEAL 194
Query: 123 SQYAKLVWEL-HNDQDRAATYYERAVHASPEDSHVHASYAGF 163
+ + + H DQ R +ER S VHA AG
Sbjct: 195 ANRQRTASIVEHLDQKR----FERLDKKRDALSSVHALDAGL 232
>sp|O60184|CYC8_SCHPO General transcriptional corepressor ssn6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ssn6 PE=1 SV=1
Length = 1102
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Query: 71 EYYKKMVEENPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEILSQYAKLVW 130
E Y++ V + NP F + YQ Q A + YSRAI +P E+ L
Sbjct: 605 EAYQQAVYRDGRNPTFWCSIGVLYYQINQ-YQDALDAYSRAIRLNPYISEVWYDLGTLYE 663
Query: 131 ELHNDQDRAATYYERAVHASPEDSHVHASYAGFLWETEEDNDECDAP 177
HN A Y+RA P + H+ A E + +AP
Sbjct: 664 SCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNAP 710
Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 73 YKKMVEENPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEILSQYAKLVWEL 132
Y+ + +NP + + A L ++++ P A EYY + DP GEI S + +
Sbjct: 357 YESALRQNPYSIPAMLQIATIL-RNREQFPLAIEYYQTILDCDPKQGEIWSALGH-CYLM 414
Query: 133 HNDQDRAATYYERAVH--ASPED 153
+D RA + Y +A++ P+D
Sbjct: 415 QDDLSRAYSAYRQALYHLKDPKD 437
>sp|Q17A75|FICD_AEDAE Adenosine monophosphate-protein transferase FICD homolog OS=Aedes
aegypti GN=AAEL005383 PE=3 SV=1
Length = 499
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 80 NPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEILSQYAKLVWEL-HNDQDR 138
+P +P L+ Y +FL ++QD+ +A+ YY +A+ +P E L+ + + H DQ R
Sbjct: 156 SPKHPEILTKYGEFLEHNQQDVVRADHYYYQALTVNPSHSEALANRQRTAQIVEHLDQKR 215
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 103 KAEEYYSRAILADPGDGEILSQYAKLVWELHNDQD--RAATYYERAVHASPEDS 154
KA + A+ P EIL++Y + + HN QD RA YY +A+ +P S
Sbjct: 144 KAARLFQHALALSPKHPEILTKYGEFLE--HNQQDVVRADHYYYQALTVNPSHS 195
>sp|P10505|APC3_SCHPO Anaphase-promoting complex subunit 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nuc2 PE=1 SV=3
Length = 665
Score = 39.3 bits (90), Expect = 0.019, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 64 GDSQGVEEYYKKMVEENPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEILS 123
G + + ++++ E NP N + ++ +Y+ +D KA ++Y RA D
Sbjct: 513 GRNDQADFHFQRAAEINPNNSVLITCIG-MIYERCKDYKKALDFYDRACKLDEKSSLARF 571
Query: 124 QYAKLVWELHNDQDRAATYYERAVHASPEDSHVH 157
+ AK++ LH D D+A E+ +P++++VH
Sbjct: 572 KKAKVLILLH-DHDKALVELEQLKAIAPDEANVH 604
>sp|O25103|HCPB_HELPY Beta-lactamase HcpB OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=hcpB PE=1 SV=1
Length = 138
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 65 DSQGVEEYYKKMVEENPGNPL-FLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEILS 123
+ Q + +Y K E N GN FL ++ + K+DL KA +YYS+A + DG ++
Sbjct: 40 NKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLIL 99
Query: 124 QYAKLVWE-LHNDQDRAATYYERAVHASPEDS 154
Y + + + ++ +A +E+A ED+
Sbjct: 100 GYKQYAGKGVVKNEKQAVKTFEKACRLGSEDA 131
>sp|Q58208|Y798_METJA TPR repeat-containing protein MJ0798 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0798 PE=4 SV=1
Length = 334
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 52 GGGSGFYPAGSGGDSQGVEEYYKKMVEENPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRA 111
G G +Y +S +Y++K++E NP + L + Y+ +D KA Y+ +A
Sbjct: 174 GLGKSYYLMSDNKNSI---KYFEKVLELNPNDVEALEYLGELYYE--EDCEKAINYFKKA 228
Query: 112 ILADPGDGEILSQYAKLVWELHNDQDRAATYYERAVHASP 151
+ P D +++ + A ++L + A Y+E+A+ +P
Sbjct: 229 LELKPDDIDLILKVAFTYFKLKKYK-HALKYFEKALKLNP 267
>sp|Q54NS3|Y5095_DICDI TPR repeat-containing protein DDB_G0285095 OS=Dictyostelium
discoideum GN=DDB_G0285095 PE=4 SV=1
Length = 263
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 86 FLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEILSQYAKLVWELHNDQDRAATYYER 145
L +YA F+ Q ++ KAE+ Y R + + E L +Y + E+ D ++ Y +
Sbjct: 164 LLLSYAIFI-QKSGEIDKAEKLYKRIVTSGARSSESLGRYGLFLLEVKKDVEKGGIYLKD 222
Query: 146 AVHASPEDSHVHASYAGFLWETEED 170
A P Y+ +L ++D
Sbjct: 223 AADIDPPSPEWCTRYSNYLKTYKKD 247
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%)
Query: 63 GGDSQGVEEYYKKMVEENPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEIL 122
G+ E+ YK++V + L Y FL + K+D+ K Y A DP E
Sbjct: 175 SGEIDKAEKLYKRIVTSGARSSESLGRYGLFLLEVKKDVEKGGIYLKDAADIDPPSPEWC 234
Query: 123 SQYAKLVWELHNDQDRAATYYERA 146
++Y+ + D+ A Y +R
Sbjct: 235 TRYSNYLKTYKKDEFEATKYQKRV 258
>sp|P48191|YCF3_CYAPA Photosystem I assembly protein ycf3 OS=Cyanophora paradoxa GN=ycf3
PE=3 SV=1
Length = 173
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 18 NAGFEQERGTVGQEMYLAKGLGVGGRGGRGGGTGGGGSGFYPAGSGGDSQGVEEYYKKM- 76
N F + TV ++ L K L V + G G ++ +E YY+ +
Sbjct: 7 NDNFIDKTFTVIADLIL-KILPVSKKTKEAFAYYRDGMS--AQSEGAYAEALENYYEALR 63
Query: 77 VEENPGNPLFLSNYAQFLYQSKQDLPKAEEYYSRAILADPGDGEILSQYAKLVWELHNDQ 136
+EE+P + + ++ S D KA EYY +A+ +P + L+ A +++ +Q
Sbjct: 64 LEEDPYDKSYTFYNIALIHTSNGDQTKALEYYRQALDLNPKMPQALNNMA-VIYHAQGEQ 122
Query: 137 --------------DRAATYYERAVHASPEDSHVHA 158
D+AA Y+++A+ +P D+++ A
Sbjct: 123 AAEQGDMEMAEALFDQAAFYWKQAIRLAP-DNYIEA 157
>sp|Q66666|TEGU_EHV2 Probable large tegument protein OS=Equine herpesvirus 2 (strain
86/87) GN=64 PE=3 SV=1
Length = 3436
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 9/180 (5%)
Query: 1 MAGTALSEEVKVMEALWNAGFEQERGTVGQEMYLAKGLGVGGRGGRGGGTGGGGSGFYPA 60
+ T L E+ V + + + +Q G G++ A G RG G+ GS A
Sbjct: 1166 LKTTDLGEDSVVSGSRYPSMEQQSVGEGGRDGLPADGKREPKAADRGSGSTAPGSRVPSA 1225
Query: 61 G--SGGDSQGVEEYYKKMVEENPGNPLFLS---NYAQFLYQSKQDLPKAEEYYSRAILAD 115
G GG +G + PG+PL N F ++ P+ S +LA+
Sbjct: 1226 GREPGGQCEGEDHVAMDEGAPGPGSPLVKKKQDNDTLFPHRGDHRAPEPANPVSLLVLAN 1285
Query: 116 PGDGEILSQYAKLVWE---LHNDQDRAATYYERAVHASPEDSHVHASYAGFLWETEEDND 172
P + ++ + L + RA T + A P D H H S + W D+D
Sbjct: 1286 PPSAPVSRAAEDMLTDMASLKRKRSRAGTASDSEDDAGPNDYHAHQSKSAN-WGDALDDD 1344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,281,210
Number of Sequences: 539616
Number of extensions: 4648917
Number of successful extensions: 52196
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 25201
Number of HSP's gapped (non-prelim): 17740
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)