Your job contains 1 sequence.
>029201
MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV
SLIFVMLISVPVIVLER
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029201
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065863 - symbol:AT2G31610 species:3702 "Arabi... 847 1.3e-84 1
TAIR|locus:2084490 - symbol:AT3G53870 species:3702 "Arabi... 846 1.7e-84 1
TAIR|locus:2169518 - symbol:AT5G35530 species:3702 "Arabi... 843 3.4e-84 1
UNIPROTKB|F1N9X5 - symbol:RPS3 "Uncharacterized protein" ... 790 1.4e-78 1
UNIPROTKB|Q3T169 - symbol:RPS3 "40S ribosomal protein S3"... 790 1.4e-78 1
UNIPROTKB|E2RH47 - symbol:RPS3 "40S ribosomal protein S3"... 790 1.4e-78 1
UNIPROTKB|P23396 - symbol:RPS3 "40S ribosomal protein S3"... 790 1.4e-78 1
UNIPROTKB|Q0Z8U2 - symbol:RPS3 "40S ribosomal protein S3"... 790 1.4e-78 1
MGI|MGI:1350917 - symbol:Rps3 "ribosomal protein S3" spec... 790 1.4e-78 1
RGD|619888 - symbol:Rps3 "ribosomal protein S3" species:1... 790 1.4e-78 1
UNIPROTKB|Q5R465 - symbol:RPS3 "40S ribosomal protein S3"... 786 3.8e-78 1
ZFIN|ZDB-GENE-030131-8494 - symbol:rps3 "ribosomal protei... 783 7.9e-78 1
UNIPROTKB|J3KN86 - symbol:RPS3 "40S ribosomal protein S3"... 751 1.9e-74 1
RGD|1560831 - symbol:RGD1560831 "similar to 40S ribosomal... 751 1.9e-74 1
UNIPROTKB|F1NPA9 - symbol:RPS3 "Uncharacterized protein" ... 748 4.0e-74 1
POMBASE|SPBC16G5.14c - symbol:rps3 "40S ribosomal protein... 732 2.0e-72 1
UNIPROTKB|G4MP11 - symbol:MGG_05673 "40S ribosomal protei... 728 5.3e-72 1
FB|FBgn0002622 - symbol:RpS3 "Ribosomal protein S3" speci... 722 2.3e-71 1
UNIPROTKB|E9PL09 - symbol:RPS3 "40S ribosomal protein S3"... 712 2.6e-70 1
ASPGD|ASPL0000016707 - symbol:AN4087 species:162425 "Emer... 704 1.8e-69 1
WB|WBGene00004472 - symbol:rps-3 species:6239 "Caenorhabd... 688 9.2e-68 1
GENEDB_PFALCIPARUM|PF14_0627 - symbol:PF14_0627 "ribosoma... 687 1.2e-67 1
UNIPROTKB|Q8IKH8 - symbol:PF14_0627 "40S ribosomal protei... 687 1.2e-67 1
SGD|S000005122 - symbol:RPS3 "Protein component of the sm... 684 2.4e-67 1
DICTYBASE|DDB_G0293000 - symbol:rps3 "40S ribosomal prote... 627 2.7e-61 1
CGD|CAL0001259 - symbol:RPS3 species:5476 "Candida albica... 587 4.6e-57 1
UNIPROTKB|F1SUM7 - symbol:RPS3 "40S ribosomal protein S3"... 575 8.6e-56 1
UNIPROTKB|E9PL45 - symbol:RPS3 "40S ribosomal protein S3"... 572 1.8e-55 1
UNIPROTKB|F2Z2S8 - symbol:RPS3 "40S ribosomal protein S3"... 513 3.2e-49 1
UNIPROTKB|H0YCJ7 - symbol:RPS3 "40S ribosomal protein S3"... 504 2.9e-48 1
UNIPROTKB|H0YF32 - symbol:RPS3 "40S ribosomal protein S3"... 469 1.5e-44 1
UNIPROTKB|D4AAX0 - symbol:D4AAX0 "Uncharacterized protein... 466 3.1e-44 1
UNIPROTKB|H0YEU2 - symbol:RPS3 "40S ribosomal protein S3"... 282 5.2e-43 2
UNIPROTKB|E9PPU1 - symbol:RPS3 "40S ribosomal protein S3"... 411 2.1e-38 1
UNIPROTKB|E9PJH4 - symbol:RPS3 "40S ribosomal protein S3"... 369 5.8e-34 1
UNIPROTKB|E9PQ96 - symbol:RPS3 "40S ribosomal protein S3"... 369 5.8e-34 1
UNIPROTKB|E9PK82 - symbol:RPS3 "40S ribosomal protein S3"... 334 3.0e-30 1
UNIPROTKB|E9PSF4 - symbol:RPS3 "40S ribosomal protein S3"... 228 5.1e-19 1
UNIPROTKB|E9PJN9 - symbol:RPS3 "40S ribosomal protein S3"... 150 9.4e-11 1
TIGR_CMR|CBU_0244 - symbol:CBU_0244 "ribosomal protein S3... 122 4.9e-06 1
UNIPROTKB|Q9KNZ0 - symbol:rpsC "30S ribosomal protein S3"... 118 1.9e-05 1
TIGR_CMR|VC_2590 - symbol:VC_2590 "ribosomal protein S3" ... 118 1.9e-05 1
TIGR_CMR|CJE_1869 - symbol:CJE_1869 "ribosomal protein S3... 115 4.5e-05 1
UNIPROTKB|P0A7V3 - symbol:rpsC species:83333 "Escherichia... 113 8.0e-05 1
TIGR_CMR|GSU_2851 - symbol:GSU_2851 "ribosomal protein S3... 107 0.00034 1
TIGR_CMR|NSE_0272 - symbol:NSE_0272 "ribosomal protein S3... 104 0.00083 1
>TAIR|locus:2065863 [details] [associations]
symbol:AT2G31610 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 GO:GO:0005774
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0009651 GO:GO:0003723 GO:GO:0003735 UniGene:At.22510
EMBL:AC007071 GO:GO:0022627 UniGene:At.24124 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092 EMBL:AF378887
EMBL:AY046041 EMBL:AY052749 EMBL:AY054622 EMBL:AY081517
EMBL:AY091208 IPI:IPI00542059 PIR:H84722 RefSeq:NP_180719.1
HSSP:P23396 ProteinModelPortal:Q9SIP7 SMR:Q9SIP7 IntAct:Q9SIP7
STRING:Q9SIP7 PaxDb:Q9SIP7 PRIDE:Q9SIP7 EnsemblPlants:AT2G31610.1
GeneID:817719 KEGG:ath:AT2G31610 TAIR:At2g31610
HOGENOM:HOG000210611 InParanoid:Q9SIP7 KO:K02985 OMA:PEGSVEX
PhylomeDB:Q9SIP7 ProtClustDB:CLSN2683263 Genevestigator:Q9SIP7
GermOnline:AT2G31610 TIGRFAMs:TIGR01008 Uniprot:Q9SIP7
Length = 250
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 168/179 (93%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>TAIR|locus:2084490 [details] [associations]
symbol:AT3G53870 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0009651
GO:GO:0003723 GO:GO:0003735 EMBL:AL132960 GO:GO:0022627
UniGene:At.24124 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 eggNOG:COG0092 HSSP:P23396 HOGENOM:HOG000210611
KO:K02985 ProtClustDB:CLSN2683263 TIGRFAMs:TIGR01008 EMBL:AF428405
EMBL:AY035022 EMBL:AY059090 EMBL:AY088808 IPI:IPI00527953
PIR:T45927 RefSeq:NP_190955.1 ProteinModelPortal:Q9M339 SMR:Q9M339
IntAct:Q9M339 STRING:Q9M339 PaxDb:Q9M339 PRIDE:Q9M339
EnsemblPlants:AT3G53870.1 GeneID:824554 KEGG:ath:AT3G53870
TAIR:At3g53870 InParanoid:Q9M339 OMA:TIRRIMN PhylomeDB:Q9M339
Genevestigator:Q9M339 GermOnline:AT3G53870 Uniprot:Q9M339
Length = 249
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 168/179 (93%), Positives = 174/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQ 179
>TAIR|locus:2169518 [details] [associations]
symbol:AT5G35530 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
GO:GO:0009651 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20
InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814 EMBL:AB015477
Gene3D:3.30.1140.32 SUPFAM:SSF54821 HSSP:P23396
HOGENOM:HOG000210611 KO:K02985 ProtClustDB:CLSN2683263
TIGRFAMs:TIGR01008 EMBL:AY058057 EMBL:AY098949 IPI:IPI00539202
RefSeq:NP_198403.1 UniGene:At.23305 ProteinModelPortal:Q9FJA6
SMR:Q9FJA6 STRING:Q9FJA6 PRIDE:Q9FJA6 EnsemblPlants:AT5G35530.1
GeneID:833518 KEGG:ath:AT5G35530 TAIR:At5g35530 InParanoid:Q9FJA6
OMA:YRIANAM PhylomeDB:Q9FJA6 Genevestigator:Q9FJA6
GermOnline:AT5G35530 Uniprot:Q9FJA6
Length = 248
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 167/179 (93%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>UNIPROTKB|F1N9X5 [details] [associations]
symbol:RPS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0045738 "negative regulation of DNA repair" evidence=IEA]
[GO:0051059 "NF-kappaB binding" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0032587
GO:GO:0004519 GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20
InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 OMA:CNDYVET GO:GO:0045738
EMBL:AADN02055154 IPI:IPI00602924 PRIDE:F1N9X5
Ensembl:ENSGALT00000036364 ArrayExpress:F1N9X5 Uniprot:F1N9X5
Length = 243
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>UNIPROTKB|Q3T169 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0051059 "NF-kappaB binding" evidence=IEA] [GO:0045738 "negative
regulation of DNA repair" evidence=IEA] [GO:0032587 "ruffle
membrane" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic
site) lyase activity" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0030529
GO:GO:0032587 GO:GO:0004519 GO:GO:0032088 GO:GO:0003906
Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 EMBL:BC102090
IPI:IPI00685601 RefSeq:NP_001029219.1 UniGene:Bt.15460
ProteinModelPortal:Q3T169 SMR:Q3T169 STRING:Q3T169 PRIDE:Q3T169
Ensembl:ENSBTAT00000003962 GeneID:326588 KEGG:bta:326588 CTD:6188
GeneTree:ENSGT00390000008610 HOVERGEN:HBG002195 InParanoid:Q3T169
OMA:CNDYVET OrthoDB:EOG4GXFNJ NextBio:20809658 ArrayExpress:Q3T169
GO:GO:0045738 Uniprot:Q3T169
Length = 243
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>UNIPROTKB|E2RH47 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9615 "Canis
lupus familiaris" [GO:0051059 "NF-kappaB binding" evidence=IEA]
[GO:0045738 "negative regulation of DNA repair" evidence=IEA]
[GO:0032587 "ruffle membrane" evidence=IEA] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0005634 GO:GO:0006917 GO:GO:0003684
GO:GO:0006412 GO:GO:0003729 GO:GO:0006974 GO:GO:0006919
GO:GO:0003735 GO:GO:0032587 GO:GO:0004519 GO:GO:0032088
GO:GO:0003906 Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0022627
SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821 PDB:2ZKQ
PDBsum:2ZKQ KO:K02985 TIGRFAMs:TIGR01008 CTD:6188
GeneTree:ENSGT00390000008610 OMA:CNDYVET GO:GO:0045738
RefSeq:XP_534008.1 ProteinModelPortal:E2RH47 SMR:E2RH47
PRIDE:E2RH47 Ensembl:ENSCAFT00000008686 GeneID:476804
KEGG:cfa:476804 EvolutionaryTrace:E2RH47 NextBio:20852408
Uniprot:E2RH47
Length = 243
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>UNIPROTKB|P23396 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=NAS;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0045738 "negative regulation of DNA repair"
evidence=IMP] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0004519 "endonuclease activity" evidence=IMP]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006917 "induction of apoptosis"
evidence=IDA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0051536 "iron-sulfur cluster binding" evidence=NAS] [GO:0006412
"translation" evidence=IC;NAS;TAS] [GO:0006413 "translational
initiation" evidence=NAS;TAS] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0051059 "NF-kappaB binding" evidence=IPI]
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0032587 "ruffle membrane" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0006917
GO:GO:0000184 GO:GO:0003684 GO:GO:0006413 EMBL:CH471076
GO:GO:0003729 GO:GO:0006974 GO:GO:0051536 GO:GO:0006919
GO:GO:0003735 GO:GO:0032587 GO:GO:0004519 GO:GO:0032088
GO:GO:0003906 GO:GO:0006415 Gene3D:3.30.300.20 InterPro:IPR015946
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 SUPFAM:SSF54814
GO:GO:0006614 GO:GO:0019083 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 HOVERGEN:HBG002195 OrthoDB:EOG4GXFNJ GO:GO:0045738
ChiTaRS:RpS3 EMBL:U14990 EMBL:U14991 EMBL:U14992 EMBL:X55715
EMBL:S42658 EMBL:AB061838 EMBL:AY791291 EMBL:AK313051 EMBL:BC003137
EMBL:BC003577 EMBL:BC013196 EMBL:BC034149 EMBL:BC071917
EMBL:BC100284 EMBL:L16016 EMBL:AB062288 IPI:IPI00011253 PIR:A41247
RefSeq:NP_000996.2 RefSeq:NP_001243731.1 RefSeq:NP_001247436.1
UniGene:Hs.546286 UniGene:Hs.740358 PDB:1WH9 PDBsum:1WH9
ProteinModelPortal:P23396 SMR:P23396 IntAct:P23396
MINT:MINT-4999144 STRING:P23396 PhosphoSite:P23396 DMDM:417719
PaxDb:P23396 PeptideAtlas:P23396 PRIDE:P23396 DNASU:6188
Ensembl:ENST00000524851 Ensembl:ENST00000527446
Ensembl:ENST00000531188 GeneID:6188 KEGG:hsa:6188 UCSC:uc001owh.3
GeneCards:GC11P075110 HGNC:HGNC:10420 MIM:600454 neXtProt:NX_P23396
PharmGKB:PA34829 InParanoid:P23396 PhylomeDB:P23396
EvolutionaryTrace:P23396 GenomeRNAi:6188 NextBio:24029
ArrayExpress:P23396 Bgee:P23396 CleanEx:HS_RPS3
Genevestigator:P23396 GermOnline:ENSG00000149273 Uniprot:P23396
Length = 243
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>UNIPROTKB|Q0Z8U2 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0030529 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 HOVERGEN:HBG002195 OrthoDB:EOG4GXFNJ EMBL:DQ660373
RefSeq:NP_001038066.1 UniGene:Ssc.53888 ProteinModelPortal:Q0Z8U2
SMR:Q0Z8U2 STRING:Q0Z8U2 PRIDE:Q0Z8U2 GeneID:733671 KEGG:ssc:733671
Uniprot:Q0Z8U2
Length = 243
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>MGI|MGI:1350917 [details] [associations]
symbol:Rps3 "ribosomal protein S3" species:10090 "Mus
musculus" [GO:0003684 "damaged DNA binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=ISO] [GO:0004519 "endonuclease activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0012505 "endomembrane system" evidence=ISO]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0032587 "ruffle membrane" evidence=ISO]
[GO:0045738 "negative regulation of DNA repair" evidence=ISO]
[GO:0051059 "NF-kappaB binding" evidence=ISO] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 MGI:MGI:1350917
GO:GO:0005634 GO:GO:0005737 GO:GO:0006917 GO:GO:0003684
GO:GO:0006412 GO:GO:0003729 GO:GO:0006974 GO:GO:0006919
GO:GO:0003735 GO:GO:0030529 GO:GO:0032587 GO:GO:0004519
GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20 InterPro:IPR015946
GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 HOVERGEN:HBG002195 OMA:CNDYVET OrthoDB:EOG4GXFNJ
GO:GO:0045738 ChiTaRS:RpS3 EMBL:X76772 EMBL:BC010721
IPI:IPI00134599 PIR:S41170 RefSeq:NP_036182.1 UniGene:Mm.236868
ProteinModelPortal:P62908 SMR:P62908 IntAct:P62908 STRING:P62908
PhosphoSite:P62908 PaxDb:P62908 PRIDE:P62908
Ensembl:ENSMUST00000032998 GeneID:27050 KEGG:mmu:27050
InParanoid:P62908 NextBio:304983 Bgee:P62908 CleanEx:MM_RPS3
Genevestigator:P62908 GermOnline:ENSMUSG00000030744 Uniprot:P62908
Length = 243
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>RGD|619888 [details] [associations]
symbol:Rps3 "ribosomal protein S3" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=IC;ISO] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=ISO] [GO:0004519 "endonuclease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006412 "translation" evidence=IC] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0012505 "endomembrane system" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO;ISS] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0032587 "ruffle
membrane" evidence=ISO] [GO:0045738 "negative regulation of DNA
repair" evidence=ISO] [GO:0051059 "NF-kappaB binding" evidence=ISO]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 RGD:619888 GO:GO:0006412 GO:GO:0030425 GO:GO:0012505
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946
GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 GeneTree:ENSGT00390000008610 HOVERGEN:HBG002195
OMA:CNDYVET OrthoDB:EOG4GXFNJ EMBL:X51536 EMBL:BC088450
IPI:IPI00212776 PIR:S13882 RefSeq:NP_001009239.1 UniGene:Rn.127805
ProteinModelPortal:P62909 SMR:P62909 IntAct:P62909 STRING:P62909
PhosphoSite:P62909 PRIDE:P62909 Ensembl:ENSRNOT00000023935
GeneID:140654 KEGG:rno:140654 UCSC:RGD:619888 InParanoid:P62909
NextBio:620608 Genevestigator:P62909 GermOnline:ENSRNOG00000017418
Uniprot:P62909
Length = 243
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>UNIPROTKB|Q5R465 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9601 "Pongo
abelii" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0030529 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 KO:K02985
TIGRFAMs:TIGR01008 CTD:6188 HOVERGEN:HBG002195 EMBL:CR861393
RefSeq:NP_001127020.1 UniGene:Pab.18462 ProteinModelPortal:Q5R465
PRIDE:Q5R465 GeneID:100174045 KEGG:pon:100174045 InParanoid:Q5R465
Uniprot:Q5R465
Length = 243
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>ZFIN|ZDB-GENE-030131-8494 [details] [associations]
symbol:rps3 "ribosomal protein S3" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 ZFIN:ZDB-GENE-030131-8494 GO:GO:0006412 GO:GO:0003723
GO:GO:0009790 GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
KO:K02985 TIGRFAMs:TIGR01008 CTD:6188 HOVERGEN:HBG002195
EMBL:BC045902 IPI:IPI00507986 RefSeq:NP_957447.1 UniGene:Dr.65656
ProteinModelPortal:Q7ZVD9 SMR:Q7ZVD9 STRING:Q7ZVD9 GeneID:336550
KEGG:dre:336550 InParanoid:Q7ZVD9 NextBio:20811799
ArrayExpress:Q7ZVD9 Uniprot:Q7ZVD9
Length = 245
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 160/191 (83%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>UNIPROTKB|J3KN86 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0006412
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 KO:K02985 CTD:6188 OMA:CNDYVET ChiTaRS:RpS3
UniGene:Hs.546286 UniGene:Hs.740358 GeneID:6188 KEGG:hsa:6188
HGNC:HGNC:10420 EMBL:AP000744 RefSeq:NP_001247435.1
ProteinModelPortal:J3KN86 Ensembl:ENST00000278572 Uniprot:J3KN86
Length = 259
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 162/207 (78%), Positives = 169/207 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVEL----------------YAEKVNNRGLCAIAQAES 104
EKGRRIRELT+VVQKRF FPE SVEL YAEKV RGLCAIAQAES
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAES 120
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV 164
LRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV
Sbjct: 121 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 180
Query: 165 NEYIDSAVRHVLLRQVSLIFVMLISVP 191
N Y+D+AVRHVLLRQ L + I +P
Sbjct: 181 NYYVDTAVRHVLLRQGVLGIKVKIMLP 207
>RGD|1560831 [details] [associations]
symbol:RGD1560831 "similar to 40S ribosomal protein S3"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 RGD:1560831
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 OrthoDB:EOG4GXFNJ IPI:IPI00195999
RefSeq:XP_001057158.1 RefSeq:XP_575143.1 PRIDE:D3ZVH2
Ensembl:ENSRNOT00000009988 GeneID:499803 KEGG:rno:499803
UCSC:RGD:1560831 CTD:499803 OMA:RITENTT NextBio:704057
Uniprot:D3ZVH2
Length = 243
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 155/191 (81%), Positives = 165/191 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYS VEVRVTP RTEIII TRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK+F FPE SVELYAEKV GLCAIAQAESL YKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGA+GCEV+VSGKLR QRAKS+KF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAEGCEVVVSGKLRGQRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>UNIPROTKB|F1NPA9 [details] [associations]
symbol:RPS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0045738 "negative regulation of DNA repair" evidence=IEA]
[GO:0051059 "NF-kappaB binding" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0032587
GO:GO:0004519 GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20
InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 GO:GO:0045738 EMBL:AADN02055154
IPI:IPI00822610 Ensembl:ENSGALT00000028006 ArrayExpress:F1NPA9
Uniprot:F1NPA9
Length = 211
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 153/181 (84%), Positives = 160/181 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I +
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 P 191
P
Sbjct: 181 P 181
>POMBASE|SPBC16G5.14c [details] [associations]
symbol:rps3 "40S ribosomal protein S3 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 PomBase:SPBC16G5.14c EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
OMA:YRIANAM EMBL:AB264328 PIR:T39606 RefSeq:NP_596763.1
ProteinModelPortal:O60128 SMR:O60128 IntAct:O60128 STRING:O60128
PRIDE:O60128 EnsemblFungi:SPBC16G5.14c.1 GeneID:2539797
KEGG:spo:SPBC16G5.14c OrthoDB:EOG4GTPP2 NextBio:20800946
Uniprot:O60128
Length = 249
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 146/190 (76%), Positives = 165/190 (86%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 64 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 124 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGV 183
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 184 LGVKVKIMLP 193
>UNIPROTKB|G4MP11 [details] [associations]
symbol:MGG_05673 "40S ribosomal protein S3" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 KO:K02985
TIGRFAMs:TIGR01008 RefSeq:XP_003710572.1 ProteinModelPortal:G4MP11
SMR:G4MP11 EnsemblFungi:MGG_05673T0 GeneID:2675978
KEGG:mgr:MGG_05673 Uniprot:G4MP11
Length = 262
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 AAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFP +SV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 66 QGRRIRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 126 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 183
>FB|FBgn0002622 [details] [associations]
symbol:RpS3 "Ribosomal protein S3" species:7227 "Drosophila
melanogaster" [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=NAS;IDA] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006281 "DNA repair" evidence=IGI;NAS] [GO:0008534 "oxidized
purine nucleobase lesion DNA N-glycosylase activity" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0005840 "ribosome"
evidence=IDA;NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 EMBL:AE014297
GO:GO:0005875 GO:GO:0007067 GO:GO:0005811 GO:GO:0006412
GO:GO:0006281 GO:GO:0043524 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 GO:GO:0090305 GO:GO:0004519 GO:GO:0016363
Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0008534 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
KO:K02985 TIGRFAMs:TIGR01008 CTD:6188 GeneTree:ENSGT00390000008610
OMA:CNDYVET EMBL:L13690 EMBL:X72921 EMBL:AY118971 PIR:S35620
RefSeq:NP_476632.1 UniGene:Dm.20234 ProteinModelPortal:Q06559
SMR:Q06559 DIP:DIP-17168N IntAct:Q06559 MINT:MINT-812597
STRING:Q06559 PaxDb:Q06559 PRIDE:Q06559 EnsemblMetazoa:FBtr0084410
GeneID:42761 KEGG:dme:Dmel_CG6779 FlyBase:FBgn0002622
InParanoid:Q06559 OrthoDB:EOG4SQVCP PhylomeDB:Q06559 ChiTaRS:RpS3
GenomeRNAi:42761 NextBio:830438 Bgee:Q06559 GermOnline:CG6779
Uniprot:Q06559
Length = 246
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 145/187 (77%), Positives = 160/187 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 VMLISVP 191
+ + +P
Sbjct: 187 KVKVMLP 193
>UNIPROTKB|E9PL09 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
TIGRFAMs:TIGR01008 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00978298 ProteinModelPortal:E9PL09 SMR:E9PL09 PRIDE:E9PL09
Ensembl:ENST00000526608 ArrayExpress:E9PL09 Bgee:E9PL09
Uniprot:E9PL09
Length = 231
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 152/191 (79%), Positives = 159/191 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE S LCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGS------------LCAIAQAESLRYKLLGGLAVRRACY 108
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 109 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 168
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 169 VLGIKVKIMLP 179
>ASPGD|ASPL0000016707 [details] [associations]
symbol:AN4087 species:162425 "Emericella nidulans"
[GO:0006407 "rRNA export from nucleus" evidence=IEA] [GO:0000056
"ribosomal small subunit export from nucleus" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0030688
"preribosome, small subunit precursor" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 GO:GO:0006412 GO:GO:0003723 EMBL:BN001302
GO:GO:0003735 SUPFAM:SSF54814 GO:GO:0015935 EMBL:AACD01000066
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 OMA:YRIANAM
OrthoDB:EOG4GTPP2 RefSeq:XP_661691.1 ProteinModelPortal:Q5B5U3
SMR:Q5B5U3 STRING:Q5B5U3 EnsemblFungi:CADANIAT00004594
GeneID:2873506 KEGG:ani:AN4087.2 Uniprot:Q5B5U3
Length = 264
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 141/175 (80%), Positives = 152/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+I T TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDI--STTHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 66 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 126 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 180
>WB|WBGene00004472 [details] [associations]
symbol:rps-3 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0002119 GO:GO:0006412
GO:GO:0018996 GO:GO:0000003 GO:GO:0003723 GO:GO:0019915
GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
GO:GO:0015935 EMBL:FO080630 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 OMA:CNDYVET PIR:T15579
RefSeq:NP_498349.1 ProteinModelPortal:P48152 SMR:P48152
DIP:DIP-25651N IntAct:P48152 MINT:MINT-1039773 STRING:P48152
PaxDb:P48152 PRIDE:P48152 EnsemblMetazoa:C23G10.3.1
EnsemblMetazoa:C23G10.3.2 EnsemblMetazoa:C23G10.3.3 GeneID:175879
KEGG:cel:CELE_C23G10.3 UCSC:C23G10.3.1 CTD:175879 WormBase:C23G10.3
InParanoid:P48152 NextBio:890122 Uniprot:P48152
Length = 247
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 139/187 (74%), Positives = 156/187 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQ +
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 VMLISVP 191
+ I +P
Sbjct: 187 KVKIMLP 193
>GENEDB_PFALCIPARUM|PF14_0627 [details] [associations]
symbol:PF14_0627 "ribosomal protein S3,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 HOGENOM:HOG000210611 KO:K02985
TIGRFAMs:TIGR01008 OMA:CNDYVET ProtClustDB:PTZ00084
RefSeq:XP_001348801.1 ProteinModelPortal:Q8IKH8 SMR:Q8IKH8
PRIDE:Q8IKH8 EnsemblProtists:PF14_0627:mRNA GeneID:812209
KEGG:pfa:PF14_0627 EuPathDB:PlasmoDB:PF3D7_1465900 Uniprot:Q8IKH8
Length = 221
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 140/195 (71%), Positives = 163/195 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 VSLIFVMLISVPVIV 194
L + I +P +
Sbjct: 181 GVLGIKVKIMLPTAI 195
>UNIPROTKB|Q8IKH8 [details] [associations]
symbol:PF14_0627 "40S ribosomal protein S3, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AE014187 GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
OMA:CNDYVET ProtClustDB:PTZ00084 RefSeq:XP_001348801.1
ProteinModelPortal:Q8IKH8 SMR:Q8IKH8 PRIDE:Q8IKH8
EnsemblProtists:PF14_0627:mRNA GeneID:812209 KEGG:pfa:PF14_0627
EuPathDB:PlasmoDB:PF3D7_1465900 Uniprot:Q8IKH8
Length = 221
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 140/195 (71%), Positives = 163/195 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 VSLIFVMLISVPVIV 194
L + I +P +
Sbjct: 181 GVLGIKVKIMLPTAI 195
>SGD|S000005122 [details] [associations]
symbol:RPS3 "Protein component of the small (40S) ribosomal
subunit, has apurinic/" species:4932 "Saccharomyces cerevisiae"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030688 "preribosome,
small subunit precursor" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0000056 "ribosomal small subunit export from nucleus"
evidence=IGI] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0006407 "rRNA
export from nucleus" evidence=IMP] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 SGD:S000005122
EMBL:BK006947 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0003906 KO:K03348 RefSeq:NP_014227.4 GeneID:855549
KEGG:sce:YNL172W GO:GO:0000056 GO:GO:0030686 PDB:1S1H PDBsum:1S1H
GO:GO:0022627 GO:GO:0030688 SUPFAM:SSF54814 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G GO:GO:0006407 Gene3D:3.30.1140.32
SUPFAM:SSF54821 eggNOG:COG0092 PDB:1K5X PDBsum:1K5X
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 OMA:YRIANAM
GeneTree:ENSGT00390000008610 OrthoDB:EOG4GTPP2 EMBL:U34347
EMBL:D25285 EMBL:L31405 EMBL:Z71454 PIR:S48510 RefSeq:NP_014221.3
ProteinModelPortal:P05750 SMR:P05750 DIP:DIP-4328N IntAct:P05750
MINT:MINT-512497 STRING:P05750 UCD-2DPAGE:P05750 PaxDb:P05750
PeptideAtlas:P05750 PRIDE:P05750 EnsemblFungi:YNL178W GeneID:855543
KEGG:sce:YNL178W EvolutionaryTrace:P05750 NextBio:979610
Genevestigator:P05750 GermOnline:YNL178W Uniprot:P05750
Length = 240
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 130/179 (72%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>DICTYBASE|DDB_G0293000 [details] [associations]
symbol:rps3 "40S ribosomal protein S3" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 dictyBase:DDB_G0293000 GO:GO:0005615
GO:GO:0045335 GenomeReviews:CM000155_GR GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AAFI02000199 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092 HSSP:P23396
KO:K02985 TIGRFAMs:TIGR01008 OMA:CNDYVET EMBL:U78756
RefSeq:XP_629347.1 ProteinModelPortal:P90526 SMR:P90526
STRING:P90526 PRIDE:P90526 EnsemblProtists:DDB0201667
GeneID:8629071 KEGG:ddi:DDB_G0293000 InParanoid:P90526
ProtClustDB:PTZ00084 Uniprot:P90526
Length = 218
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 128/189 (67%), Positives = 152/189 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 6 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPN 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY +
Sbjct: 66 ARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAI 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
+ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP ++ID A RHVLLRQ +L
Sbjct: 126 VHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTL 185
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 186 GVKVAIMLP 194
>CGD|CAL0001259 [details] [associations]
symbol:RPS3 species:5476 "Candida albicans" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0030688
"preribosome, small subunit precursor" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0006407 "rRNA
export from nucleus" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR005703 InterPro:IPR009019
Pfam:PF00189 Pfam:PF07650 PROSITE:PS50823 CGD:CAL0001259
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF54814
GO:GO:0015935 EMBL:AACQ01000214 EMBL:AACQ01000213
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
RefSeq:XP_711097.1 RefSeq:XP_711114.1 ProteinModelPortal:Q59N00
SMR:Q59N00 STRING:Q59N00 GeneID:3647287 GeneID:3647299
KEGG:cal:CaO19.13689 KEGG:cal:CaO19.6312 Uniprot:Q59N00
Length = 251
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 116/188 (61%), Positives = 145/188 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL-I 183
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ L I
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 184 FVMLISVP 191
V ++ P
Sbjct: 186 KVKIMKDP 193
>UNIPROTKB|F1SUM7 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001351 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 PROSITE:PS00548
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
TIGRFAMs:TIGR01008 OMA:TIRRIMN GeneTree:ENSGT00390000008610
EMBL:CU655994 Ensembl:ENSSSCT00000016207 Uniprot:F1SUM7
Length = 195
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 118/142 (83%), Positives = 124/142 (87%)
Query: 50 IRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL 109
I ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKL
Sbjct: 2 ILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKL 61
Query: 110 LGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
LGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D
Sbjct: 62 LGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGVMIHSGDPVNYYVD 121
Query: 170 SAVRHVLLRQVSLIFVMLISVP 191
+AVRHVLLRQ L + I +P
Sbjct: 122 TAVRHVLLRQGVLGIKVKIMLP 143
>UNIPROTKB|E9PL45 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 SMART:SM00322
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
Gene3D:3.30.1140.32 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00978911 ProteinModelPortal:E9PL45 SMR:E9PL45 PRIDE:E9PL45
Ensembl:ENST00000530689 ArrayExpress:E9PL45 Bgee:E9PL45
Uniprot:E9PL45
Length = 164
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 117/128 (91%), Positives = 119/128 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIME 128
GVLRFIME
Sbjct: 121 GVLRFIME 128
>UNIPROTKB|F2Z2S8 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 SMART:SM00322
GO:GO:0005737 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00979604 ProteinModelPortal:F2Z2S8 SMR:F2Z2S8 PRIDE:F2Z2S8
Ensembl:ENST00000530164 UCSC:uc001owg.3 ArrayExpress:F2Z2S8
Bgee:F2Z2S8 Uniprot:F2Z2S8
Length = 117
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/117 (90%), Positives = 108/117 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>UNIPROTKB|H0YCJ7 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
PRIDE:H0YCJ7 Ensembl:ENST00000526248 Bgee:H0YCJ7 Uniprot:H0YCJ7
Length = 135
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 104/114 (91%), Positives = 106/114 (92%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKG
Sbjct: 1 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKG 60
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 RRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 114
>UNIPROTKB|H0YF32 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
PRIDE:H0YF32 Ensembl:ENST00000530170 Bgee:H0YF32 Uniprot:H0YF32
Length = 123
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 98/110 (89%), Positives = 100/110 (90%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+
Sbjct: 2 VADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTA 61
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR C G
Sbjct: 62 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR-CAG 110
>UNIPROTKB|D4AAX0 [details] [associations]
symbol:D4AAX0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001351 InterPro:IPR009019 GO:GO:0006412
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 GeneTree:ENSGT00390000008610
EMBL:AC111678 IPI:IPI00391156 Ensembl:ENSRNOT00000038678
Uniprot:D4AAX0
Length = 222
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 113/191 (59%), Positives = 130/191 (68%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISK RK VA+G+F AELNE LT+ELAEDG+SGVEV VT RTEI I ATRTQ+VLG
Sbjct: 1 MAMQISKNRKSVAEGIFKAELNEFLTQELAEDGHSGVEVWVTLTRTEINISATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG IR + V QKRF FPE ++EL AEKV R LCA QAES YKLLG LA+R AC
Sbjct: 61 EKGHGIRSIAGV-QKRFCFPEGNLELCAEKVAMRSLCAFVQAESAGYKLLGRLALR-ACC 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
L FIME GAKGCEV+V+GKL+ K D VN Y+D+ V HVLLRQ
Sbjct: 119 SELWFIMERGAKGCEVVVTGKLQ-----DCKRAD---------VNYYVDTCVCHVLLRQG 164
Query: 181 SLIFVMLISVP 191
L + + +P
Sbjct: 165 MLSIKVKLMLP 175
>UNIPROTKB|H0YEU2 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 PROSITE:PS00548 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
PRIDE:H0YEU2 Ensembl:ENST00000525933 Bgee:H0YEU2 Uniprot:H0YEU2
Length = 171
Score = 282 (104.3 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 57/75 (76%), Positives = 62/75 (82%)
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVL
Sbjct: 45 RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVL 104
Query: 177 LRQVSLIFVMLISVP 191
LRQ L + I +P
Sbjct: 105 LRQGVLGIKVKIMLP 119
Score = 189 (71.6 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATR 54
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATR
Sbjct: 2 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATR 45
>UNIPROTKB|E9PPU1 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00984887 ProteinModelPortal:E9PPU1 SMR:E9PPU1 PRIDE:E9PPU1
Ensembl:ENST00000534440 ArrayExpress:E9PPU1 Bgee:E9PPU1
Uniprot:E9PPU1
Length = 158
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 85/99 (85%), Positives = 88/99 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAI 99
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG+ I
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGVLGI 99
>UNIPROTKB|E9PJH4 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00977579
ProteinModelPortal:E9PJH4 SMR:E9PJH4 PRIDE:E9PJH4
Ensembl:ENST00000532872 ArrayExpress:E9PJH4 Bgee:E9PJH4
Uniprot:E9PJH4
Length = 115
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>UNIPROTKB|E9PQ96 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00980283
ProteinModelPortal:E9PQ96 SMR:E9PQ96 PRIDE:E9PQ96
Ensembl:ENST00000528439 ArrayExpress:E9PQ96 Bgee:E9PQ96
Uniprot:E9PQ96
Length = 91
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>UNIPROTKB|E9PK82 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00981193
ProteinModelPortal:E9PK82 SMR:E9PK82 PRIDE:E9PK82
Ensembl:ENST00000527273 ArrayExpress:E9PK82 Bgee:E9PK82
Uniprot:E9PK82
Length = 128
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 69/76 (90%), Positives = 71/76 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKR 76
EKGRRIRELT+VVQKR
Sbjct: 61 EKGRRIRELTAVVQKR 76
>UNIPROTKB|E9PSF4 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR018280 Pfam:PF00189 PROSITE:PS00548
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1140.32 SUPFAM:SSF54821 ChiTaRS:RpS3 HGNC:HGNC:10420
EMBL:AP000744 IPI:IPI00939811 ProteinModelPortal:E9PSF4 SMR:E9PSF4
PRIDE:E9PSF4 Ensembl:ENST00000422465 ArrayExpress:E9PSF4
Bgee:E9PSF4 Uniprot:E9PSF4
Length = 103
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 47/65 (72%), Positives = 52/65 (80%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVM 186
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L +
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 LISVP 191
I +P
Sbjct: 61 KIMLP 65
>UNIPROTKB|E9PJN9 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001351 Pfam:PF00189
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1140.32
SUPFAM:SSF54821 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00855830 ProteinModelPortal:E9PJN9 SMR:E9PJN9
Ensembl:ENST00000528847 ArrayExpress:E9PJN9 Bgee:E9PJN9
Uniprot:E9PJN9
Length = 36
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 35
>TIGR_CMR|CBU_0244 [details] [associations]
symbol:CBU_0244 "ribosomal protein S3" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
EMBL:AF064946 Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:NP_819288.1
ProteinModelPortal:O85388 SMR:O85388 GeneID:1208125
KEGG:cbu:CBU_0244 PATRIC:17929181
BioCyc:CBUR227377:GJ7S-250-MONOMER Uniprot:O85388
Length = 227
Score = 122 (48.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/151 (31%), Positives = 76/151 (50%)
Query: 13 ADGVFFAE-LNEVLT-RELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKGRR 65
AD FA+ LNE L R+L + G V R+ P R +III + R ++G+KG
Sbjct: 24 ADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKGGE 83
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
I L + K K P V + E+V L A AE++ +L + RRA ++
Sbjct: 84 IEALRDEIFKVMKVP---VHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAVQN 140
Query: 126 IMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
+ GA G ++ VSG+L A+ A++ +++G
Sbjct: 141 TLRQGALGVKISVSGRLGGAEIARTEWYREG 171
>UNIPROTKB|Q9KNZ0 [details] [associations]
symbol:rpsC "30S ribosomal protein S3" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 KO:K02982 eggNOG:COG0092 OMA:MGQKTNP
ProtClustDB:PRK00310 PIR:H82058 RefSeq:NP_232218.1
ProteinModelPortal:Q9KNZ0 SMR:Q9KNZ0 PRIDE:Q9KNZ0 DNASU:2615607
GeneID:2615607 KEGG:vch:VC2590 PATRIC:20084206 Uniprot:Q9KNZ0
Length = 233
Score = 118 (46.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 2 ATQISKKRKFV--ADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + + F DG F ++ + L++ELA S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQYLSKELANASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
A +R GAKG +V VSG+L A+ A+S +++G
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREG 171
>TIGR_CMR|VC_2590 [details] [associations]
symbol:VC_2590 "ribosomal protein S3" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 HAMAP:MF_01309_B
SUPFAM:SSF54821 TIGRFAMs:TIGR01009 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 PIR:H82058 RefSeq:NP_232218.1
ProteinModelPortal:Q9KNZ0 SMR:Q9KNZ0 PRIDE:Q9KNZ0 DNASU:2615607
GeneID:2615607 KEGG:vch:VC2590 PATRIC:20084206 Uniprot:Q9KNZ0
Length = 233
Score = 118 (46.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 2 ATQISKKRKFV--ADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + + F DG F ++ + L++ELA S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQYLSKELANASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
A +R GAKG +V VSG+L A+ A+S +++G
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREG 171
>TIGR_CMR|CJE_1869 [details] [associations]
symbol:CJE_1869 "ribosomal protein S3" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 HAMAP:MF_01309_B
SUPFAM:SSF54821 TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982
eggNOG:COG0092 OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:YP_179839.1
ProteinModelPortal:Q5HS96 SMR:Q5HS96 STRING:Q5HS96 GeneID:3232496
KEGG:cjr:CJE1869 PATRIC:20045570
BioCyc:CJEJ195099:GJC0-1908-MONOMER Uniprot:Q5HS96
Length = 233
Score = 115 (45.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ L R+L G S + V T + + + A R ++G+KG + L +Q
Sbjct: 38 KIRAFLKRKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIG- 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
V + ++ G A AES+ +L +A RRA V++ ++GAKG +V VS
Sbjct: 97 --KDVNINIKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVS 154
Query: 140 GKLR-AQRAKSMKFKDG 155
G+L A+ A++ + +G
Sbjct: 155 GRLGGAEMARTEWYLEG 171
>UNIPROTKB|P0A7V3 [details] [associations]
symbol:rpsC species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 PDB:3J00 PDBsum:3J00 Gene3D:3.30.300.20
InterPro:IPR015946 PDB:3FIH PDB:3IZV PDB:3IZW PDBsum:3FIH
PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 SUPFAM:SSF54814 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ EMBL:X02613 Gene3D:3.30.1140.32
HAMAP:MF_01309_B SUPFAM:SSF54821 TIGRFAMs:TIGR01009
HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092 PDB:4GAS PDB:4GD1
PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87 PDB:1VS5
PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P PDB:2I2U
PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF PDB:2QBH
PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO PDB:2VHP
PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
PDBsum:4GAQ PDBsum:4GD2 OMA:MGQKTNP ProtClustDB:PRK00310 PIR:H23129
RefSeq:NP_417773.1 RefSeq:YP_492118.1 ProteinModelPortal:P0A7V3
SMR:P0A7V3 DIP:DIP-35807N IntAct:P0A7V3 PaxDb:P0A7V3 PRIDE:P0A7V3
EnsemblBacteria:EBESCT00000002180 EnsemblBacteria:EBESCT00000016265
GeneID:12932292 GeneID:947814 KEGG:ecj:Y75_p3862 KEGG:eco:b3314
PATRIC:32122060 EchoBASE:EB0895 EcoGene:EG10902
BioCyc:EcoCyc:EG10902-MONOMER BioCyc:ECOL316407:JW3276-MONOMER
EvolutionaryTrace:P0A7V3 Genevestigator:P0A7V3 Uniprot:P0A7V3
Length = 233
Score = 113 (44.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + LT+ELA+ S + + + I R V+G+KG + +L VV
Sbjct: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P ++ +V L A A+S+ +L + RRA ++ M GAKG +V VS
Sbjct: 98 P---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154
Query: 140 GKLR-AQRAKSMKFKDG 155
G+L A+ A++ +++G
Sbjct: 155 GRLGGAEIARTEWYREG 171
>TIGR_CMR|GSU_2851 [details] [associations]
symbol:GSU_2851 "ribosomal protein S3" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005704
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0006412
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:NP_953894.1
ProteinModelPortal:Q748Z4 SMR:Q748Z4 GeneID:2688714
KEGG:gsu:GSU2851 PATRIC:22028549
BioCyc:GSUL243231:GH27-2825-MONOMER Uniprot:Q748Z4
Length = 211
Score = 107 (42.7 bits), Expect = 0.00034, P = 0.00034
Identities = 34/137 (24%), Positives = 65/137 (47%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+L L + L G S +E+ + +I I R ++G+KG + L + K
Sbjct: 37 KLRNFLKKRLYNSGVSKIEIERAANKAKINIYTARPGLIIGKKGAEVETLKKELAK---L 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ + L ++V L A AE++ +L +A RRA + ++ GAKG + S
Sbjct: 94 TDKEIYLNIQEVRKPELDAQLVAENVALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCS 153
Query: 140 GKLR-AQRAKSMKFKDG 155
G+L A+ +++ +++G
Sbjct: 154 GRLGGAEMSRTEWYREG 170
>TIGR_CMR|NSE_0272 [details] [associations]
symbol:NSE_0272 "ribosomal protein S3" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:YP_506163.1
ProteinModelPortal:Q2GED3 STRING:Q2GED3 GeneID:3931521
KEGG:nse:NSE_0272 PATRIC:22680637
BioCyc:NSEN222891:GHFU-299-MONOMER Uniprot:Q2GED3
Length = 211
Score = 104 (41.7 bits), Expect = 0.00083, P = 0.00083
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
K VA+ F + E A G S V ++ +I + + ++G+KG +
Sbjct: 31 KTVAEDYFVTKYVE---SSFAHIGISKVIIKRKGASCDITLHCMKPGLIIGKKGADLESF 87
Query: 70 TSVVQKRFKF-PE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+ K+F F P N VE+ +K N+ A+ A+S+ ++L + RR + +M
Sbjct: 88 RLKLNKKFGFVPSLNVVEV--KKPNSS---AVLVAKSIAFQLEKRSSFRRVIKKAIATVM 142
Query: 128 -ESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
ES KG +V SG+L A+ A++ FK+G
Sbjct: 143 RESDVKGVKVACSGRLSGAEIARTEVFKEG 172
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.41 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 542 (58 KB)
Total size of DFA: 122 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.09u 0.13s 16.22t Elapsed: 00:00:01
Total cpu time: 16.10u 0.14s 16.24t Elapsed: 00:00:01
Start: Fri May 10 10:03:52 2013 End: Fri May 10 10:03:53 2013