BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029201
(197 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444782|ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 175/179 (97%), Positives = 178/179 (99%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQ 179
>gi|449447888|ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449521735|ref|XP_004167885.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 236
Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/179 (97%), Positives = 178/179 (99%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQ 179
>gi|225442156|ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/179 (97%), Positives = 178/179 (99%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN+VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQ 179
>gi|449446618|ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 243
Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/179 (97%), Positives = 178/179 (99%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQ 179
>gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/179 (97%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQ 179
>gi|359476269|ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 178/179 (99%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGKRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa]
gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa]
gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/179 (97%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQ 179
>gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/179 (97%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQ 179
>gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa]
gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa]
gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 355 bits (910), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQ 179
>gi|356559951|ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 234
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MSTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP+NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQ 179
>gi|356534894|ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|388494596|gb|AFK35364.1| unknown [Lotus japonicus]
gi|388504726|gb|AFK40429.1| unknown [Lotus japonicus]
Length = 237
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP++TEIIIRATRTQ VLG
Sbjct: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|358348478|ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|356534900|ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 239
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|357439691|ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula]
gi|355479171|gb|AES60374.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|388518095|gb|AFK47109.1| unknown [Medicago truncatula]
Length = 239
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|358248410|ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|356559953|ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|357438107|ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK+LGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKVLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|351726176|ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycine max]
gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 177/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC+
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACH 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
Length = 235
Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIS GQPV EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISCGQPVKEYIDSAVRHVLLRQ 179
>gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis]
gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis]
Length = 233
Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQ 179
>gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula]
gi|388507820|gb|AFK41976.1| unknown [Medicago truncatula]
Length = 239
Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR CY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|388495648|gb|AFK35890.1| unknown [Lotus japonicus]
Length = 235
Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPV+TEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVV KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVSKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 233
Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/180 (97%), Positives = 178/180 (98%), Gaps = 1/180 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATAQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRFKFPENSVELYAEKVN+RGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 180
>gi|255638159|gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR CY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|413921202|gb|AFW61134.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 265
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/182 (93%), Positives = 177/182 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
Query: 181 SL 182
Sbjct: 181 CF 182
>gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis]
gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis]
Length = 233
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/179 (96%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAKQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQ 179
>gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
>gi|413921201|gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
>gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
>gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN+YIDSAVRHV+LRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQ 179
>gi|255637340|gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 348 bits (892), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 171/179 (95%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMI SGQPV +YID AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIFSGQPVKDYIDFAVRHVLLRQ 179
>gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1
gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain
[Arabidopsis thaliana]
gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana]
gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
Length = 250
Score = 348 bits (892), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 168/179 (93%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN+YIDSAVRHV+LRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQ 179
>gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQ 179
>gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays]
gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays]
gi|223947389|gb|ACN27778.1| unknown [Zea mays]
gi|223972753|gb|ACN30564.1| unknown [Zea mays]
gi|413917290|gb|AFW57222.1| 40S ribosomal protein S3 [Zea mays]
Length = 229
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLR++MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 121 GVLRYVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
>gi|357144865|ref|XP_003573440.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 227
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQ 179
>gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGA+GCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAEGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
>gi|357498229|ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|357498233|ref|XP_003619405.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494418|gb|AES75621.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494420|gb|AES75623.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 235
Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGY+GVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYAGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFK YMISSGQPV +Y+DSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKQNYMISSGQPVKDYVDSAVRHVLLRQ 179
>gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
gi|75170994|sp|Q9FJA6.1|RS33_ARATH RecName: Full=40S ribosomal protein S3-3
gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana]
gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
Length = 248
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/179 (93%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/179 (93%), Positives = 174/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKF DGYM+SSGQP EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFMDGYMVSSGQPTKEYIDSAVRHVLLRQ 179
>gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza
sativa]
gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group]
gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group]
gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/177 (96%), Positives = 173/177 (97%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
TQISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEK
Sbjct: 5 TQISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV
Sbjct: 65 GRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQ
Sbjct: 125 LRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQ 181
>gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum]
Length = 238
Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/180 (96%), Positives = 176/180 (97%), Gaps = 1/180 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYID+AVRHVLLRQ
Sbjct: 121 YGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQ 180
>gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
gi|75183568|sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2
gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana]
gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana]
gi|332645631|gb|AEE79152.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
Length = 249
Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 168/179 (93%), Positives = 174/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQ 179
>gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 168/179 (93%), Positives = 174/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQ 179
>gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
Length = 230
Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 176/179 (98%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVNE+ID AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQ 179
>gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 166/179 (92%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF+FP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
Length = 248
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/179 (92%), Positives = 174/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIGELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/179 (93%), Positives = 175/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F EN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFLENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQ 179
>gi|414887550|tpg|DAA63564.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 198
Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/176 (95%), Positives = 171/176 (97%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQV
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQV 182
>gi|384247377|gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Coccomyxa
subellipsoidea C-169]
Length = 217
Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/179 (93%), Positives = 174/179 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+ TRELAE GYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATAISKKRKFVADGVFYAELNELFTRELAEHGYSGVEVRVTPLRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELT+VVQKRFKFPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 VKGRRIRELTAVVQKRFKFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIME+GAKGCEVIVSGKLRAQRAK+MKFKDGYMISSGQPVN+YIDSAVRHVLLRQ
Sbjct: 121 GVLRFIMENGAKGCEVIVSGKLRAQRAKAMKFKDGYMISSGQPVNDYIDSAVRHVLLRQ 179
>gi|255637525|gb|ACU19089.1| unknown [Glycine max]
Length = 239
Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 173/179 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAK MKFKDGYMI GQPV +YID AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKFMKFKDGYMIFFGQPVKDYIDFAVRHVLLRQ 179
>gi|212723988|ref|NP_001132637.1| hypothetical protein [Zea mays]
gi|194694962|gb|ACF81565.1| unknown [Zea mays]
gi|414887551|tpg|DAA63565.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
gi|414887552|tpg|DAA63566.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 232
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/175 (95%), Positives = 170/175 (97%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQ
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQ 181
>gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
Length = 232
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/175 (95%), Positives = 170/175 (97%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQ
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQ 181
>gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
Length = 236
Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 169/185 (91%), Positives = 176/185 (95%), Gaps = 6/185 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 116
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVLY 120
Query: 117 --RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 174
RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVNE+ID AVRH
Sbjct: 121 FVRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRH 180
Query: 175 VLLRQ 179
VLLRQ
Sbjct: 181 VLLRQ 185
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 161/179 (89%), Positives = 170/179 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1367 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 1426
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV +RGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 1427 EKGRRIRELTSVVQKRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACY 1486
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG P YID+AVRHVLLRQ
Sbjct: 1487 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQ 1545
>gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 332 bits (850), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/179 (89%), Positives = 169/179 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MALQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAK MKFKDGYMISSG PVN+YID AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKPMKFKDGYMISSGHPVNQYIDGAVRHVLLRQ 179
>gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta]
Length = 230
Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 162/179 (90%), Positives = 170/179 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG P YID AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGHPARVYIDGAVRHVLLRQ 179
>gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 230
Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 161/179 (89%), Positives = 169/179 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVQDGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG P YID AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDGAVRHVLLRQ 179
>gi|357116410|ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 276
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/177 (89%), Positives = 167/177 (94%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTP+RTEIIIRATRTQ+VLGEK
Sbjct: 49 AQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQSVLGEK 108
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRRACYGV
Sbjct: 109 GRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGV 168
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQ
Sbjct: 169 LRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDGAVRHVLLRQ 225
>gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus]
Length = 206
Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 170/191 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+A+RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 GLGIKVKIMLP 191
>gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron camtschaticum]
Length = 240
Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 170/191 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+A+RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus]
Length = 243
Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 170/191 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE+LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEILTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/179 (88%), Positives = 169/179 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF+AELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MSAQISKKRKFVADGVFYAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIME+GAKGCEV+VSGKLR QR K+MKFKDGYMISSG PV EYI+S+VRHVLLRQ
Sbjct: 121 GVLRFIMENGAKGCEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESSVRHVLLRQ 179
>gi|348522975|ref|XP_003448999.1| PREDICTED: 40S ribosomal protein S3-like [Oreochromis niloticus]
Length = 245
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis]
Length = 245
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 170/191 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGTVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis]
Length = 243
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392881646|gb|AFM89655.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/191 (85%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus]
gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus]
Length = 244
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct]
Length = 244
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus]
gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa]
gi|293331917|ref|NP_001168943.1| uncharacterized protein LOC100382757 [Zea mays]
gi|354622982|ref|NP_001238928.1| 40S ribosomal protein S3 [Pan troglodytes]
gi|378548190|ref|NP_001243731.1| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|388453034|ref|NP_001253219.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|395814830|ref|XP_003780943.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Otolemur garnettii]
gi|395814832|ref|XP_003780944.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Otolemur garnettii]
gi|395814834|ref|XP_003780945.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Otolemur garnettii]
gi|395814836|ref|XP_003780946.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Otolemur garnettii]
gi|397487317|ref|XP_003814749.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Pan paniscus]
gi|397487319|ref|XP_003814750.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Pan paniscus]
gi|402894681|ref|XP_003910477.1| PREDICTED: 40S ribosomal protein S3 [Papio anubis]
gi|403262289|ref|XP_003923526.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403262291|ref|XP_003923527.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403262293|ref|XP_003923528.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Saimiri boliviensis
boliviensis]
gi|426245151|ref|XP_004016377.1| PREDICTED: 40S ribosomal protein S3 [Ovis aries]
gi|417719|sp|P23396.2|RS3_HUMAN RecName: Full=40S ribosomal protein S3
gi|91207641|sp|Q3T169.1|RS3_BOVIN RecName: Full=40S ribosomal protein S3
gi|115502828|sp|Q0Z8U2.1|RS3_PIG RecName: Full=40S ribosomal protein S3
gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens]
gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens]
gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens]
gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens]
gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens]
gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens]
gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens]
gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens]
gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens]
gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus]
gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa]
gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens]
gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct]
gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct]
gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens]
gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct]
gi|223973891|gb|ACN31133.1| unknown [Zea mays]
gi|296479794|tpg|DAA21909.1| TPA: 40S ribosomal protein S3 [Bos taurus]
gi|387542628|gb|AFJ71941.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|440899677|gb|ELR50946.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 243
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus]
gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus]
gi|57102362|ref|XP_534008.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Canis lupus
familiaris]
gi|149719291|ref|XP_001494894.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca]
gi|344296780|ref|XP_003420081.1| PREDICTED: 40S ribosomal protein S3-like [Loxodonta africana]
gi|348555219|ref|XP_003463421.1| PREDICTED: 40S ribosomal protein S3-like [Cavia porcellus]
gi|410972647|ref|XP_003992770.1| PREDICTED: 40S ribosomal protein S3 [Felis catus]
gi|51703302|sp|P62909.1|RS3_RAT RecName: Full=40S ribosomal protein S3
gi|51703309|sp|P62908.1|RS3_MOUSE RecName: Full=40S ribosomal protein S3
gi|325530283|sp|E2RH47.1|RS3_CANFA RecName: Full=40S ribosomal protein S3
gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus]
gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus]
gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus]
gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus]
gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus]
gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus]
gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus]
gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus]
gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus]
gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus]
gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus]
gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus]
gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus]
gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus]
gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus]
gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus]
gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus]
gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus]
gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus]
gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus]
gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus]
gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|431838442|gb|ELK00374.1| 40S ribosomal protein S3 [Pteropus alecto]
gi|444731541|gb|ELW71894.1| 40S ribosomal protein S3 [Tupaia chinensis]
Length = 243
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus]
Length = 223
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/196 (83%), Positives = 173/196 (88%), Gaps = 4/196 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ- 179
Query: 181 SLIFVMLISVPVIVLE 196
V+ I V +I++E
Sbjct: 180 ---GVLGIKVKIIIVE 192
>gi|417409029|gb|JAA51041.1| Putative 40s ribosomal protein s3, partial [Desmodus rotundus]
Length = 251
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 9 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 68
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 69 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 128
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 129 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 188
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 189 VLGIKVKIMLP 199
>gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus]
Length = 243
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|350537143|ref|NP_001232278.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|449284051|gb|EMC90633.1| 40S ribosomal protein S3 [Columba livia]
Length = 243
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|126327841|ref|XP_001362617.1| PREDICTED: 40S ribosomal protein S3-like [Monodelphis domestica]
Length = 243
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392877878|gb|AFM87771.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|351696964|gb|EHA99882.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 243
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392873570|gb|AFM85617.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392873790|gb|AFM85727.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874028|gb|AFM85846.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874738|gb|AFM86201.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874910|gb|AFM86287.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392875972|gb|AFM86818.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876244|gb|AFM86954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876330|gb|AFM86997.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876834|gb|AFM87249.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392879612|gb|AFM88638.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881068|gb|AFM89366.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881436|gb|AFM89550.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882158|gb|AFM89911.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882756|gb|AFM90210.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392884244|gb|AFM90954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|387018380|gb|AFJ51308.1| 40S ribosomal protein S3-like [Crotalus adamanteus]
Length = 243
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392875182|gb|AFM86423.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876076|gb|AFM86870.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876116|gb|AFM86890.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877034|gb|AFM87349.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877852|gb|AFM87758.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878058|gb|AFM87861.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878198|gb|AFM87931.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878664|gb|AFM88164.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880050|gb|AFM88857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880832|gb|AFM89248.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881218|gb|AFM89441.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881252|gb|AFM89458.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881368|gb|AFM89516.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392883684|gb|AFM90674.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392873640|gb|AFM85652.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVRIMLP 191
>gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis]
Length = 230
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/179 (87%), Positives = 168/179 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+ +SK RK VADGVF+AELNE+L REL +GYSGVEVRVTP+RTE+IIRATRTQNVLG
Sbjct: 1 MASAVSKTRKAVADGVFYAELNELLMRELGGEGYSGVEVRVTPMRTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELTSVVQKRFKFPE SVELYAEKV NRGLCA+AQAES+RYKLLGGLAVRRACY
Sbjct: 61 VKGRRIRELTSVVQKRFKFPEGSVELYAEKVANRGLCAVAQAESMRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PV+EYIDSA RHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGNPVHEYIDSATRHVLLRQ 179
>gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis]
gi|133940|sp|P02350.2|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A
gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis]
gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis]
Length = 246
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392876674|gb|AFM87169.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar]
Length = 250
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 6 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 65
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 66 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 125
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 126 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 185
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 186 VLGIKVKIMLP 196
>gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus]
Length = 277
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392873892|gb|AFM85778.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis]
gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis]
gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis]
Length = 246
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
Length = 246
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax]
Length = 245
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus]
Length = 251
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus]
Length = 245
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis]
Length = 245
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|432889332|ref|XP_004075224.1| PREDICTED: 40S ribosomal protein S3-like [Oryzias latipes]
Length = 245
Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|410909578|ref|XP_003968267.1| PREDICTED: 40S ribosomal protein S3-like [Takifugu rubripes]
Length = 245
Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix]
Length = 245
Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens]
Length = 243
Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISK+RKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio]
Length = 245
Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus]
Length = 243
Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQ+RF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQERFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii]
gi|75061590|sp|Q5R465.1|RS3_PONAB RecName: Full=40S ribosomal protein S3
gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii]
gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
Length = 243
Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392881092|gb|AFM89378.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRE T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIREFTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis]
Length = 241
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/191 (83%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT +SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATSVSKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392873496|gb|AFM85580.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSM+F DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMEFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392880950|gb|AFM89307.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII A RTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILAARTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Callithrix
jacchus]
gi|390470016|ref|XP_003734218.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Callithrix
jacchus]
gi|390470018|ref|XP_003734219.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Callithrix
jacchus]
gi|390470020|ref|XP_003734220.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Callithrix
jacchus]
Length = 243
Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMES AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESSAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392873614|gb|AFM85639.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV+ Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVSYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|13097759|gb|AAH03577.1| Unknown (protein for IMAGE:3544292), partial [Homo sapiens]
gi|15341992|gb|AAH13196.1| Unknown (protein for IMAGE:4347401), partial [Homo sapiens]
Length = 242
Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 161/190 (84%), Positives = 168/190 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 1 AVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 180
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 181 LGIKVKIMLP 190
>gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus]
Length = 181
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/179 (88%), Positives = 164/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|392880630|gb|AFM89147.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRK VADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKLVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar]
gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar]
gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar]
gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG++GCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSRGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392877392|gb|AFM87528.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFI ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFITESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAE LRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|402913757|ref|XP_003919330.1| PREDICTED: 40S ribosomal protein S3-like [Papio anubis]
Length = 243
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEV VTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVLVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus]
Length = 201
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/179 (88%), Positives = 164/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|2500399|sp|P79891.1|RS3_AMBME RecName: Full=40S ribosomal protein S3
gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum]
Length = 253
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/179 (88%), Positives = 164/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus]
Length = 189
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/179 (88%), Positives = 164/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis]
gi|1350988|sp|P47835.1|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B
gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis]
gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis]
Length = 246
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1 MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392881056|gb|AFM89360.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK F FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKGFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392875076|gb|AFM86370.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SV LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVGLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392878050|gb|AFM87857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHV LRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVSLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio]
gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio]
gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio]
Length = 245
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392873428|gb|AFM85546.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF PE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGSPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/191 (83%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis]
Length = 213
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/191 (83%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQNVLG
Sbjct: 1 MATPISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE++VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus]
Length = 206
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/179 (88%), Positives = 164/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus]
gi|22001962|sp|Q90YS2.1|RS3_ICTPU RecName: Full=40S ribosomal protein S3
gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FP SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPECNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus]
Length = 243
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F ELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKVELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGC+V+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum]
Length = 240
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/182 (90%), Positives = 170/182 (93%), Gaps = 3/182 (1%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIR LTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRSLTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGAK-GCEV-IVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
YGVLRF+MESG GCEV VSGKLRAQRAKSMK DGYMISSG PV++Y+D+AVRHVLL
Sbjct: 121 YGVLRFVMESGTPTGCEVDSVSGKLRAQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLL 180
Query: 178 RQ 179
RQ
Sbjct: 181 RQ 182
>gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/179 (85%), Positives = 166/179 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF+AELNE L RELAE+GY+GVEVRVTP RTEI+IRATRTQNVLG
Sbjct: 1 MTTIISKKRKFVADGVFYAELNEFLQRELAEEGYAGVEVRVTPARTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF +PEN+VELYAEKVNNRGL A+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSIVQKRFNYPENTVELYAEKVNNRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+RF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQP EYID AVRHVLLRQ
Sbjct: 121 GVVRFVMESGAKGCEVVISGKLRAARAKSMKFVDGFMIHSGQPAKEYIDYAVRHVLLRQ 179
>gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
Length = 226
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFGFAEGTVELYAEKVAQRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N Y+DSAVRHV+LRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPANSYVDSAVRHVMLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius]
Length = 247
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG CAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGPCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|392875060|gb|AFM86362.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/191 (84%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRARY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea]
Length = 234
Score = 318 bits (815), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 158/191 (82%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAAQVSKKRKFVNDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFPEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG+P EY+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGEPSREYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|443732033|gb|ELU16925.1| hypothetical protein CAPTEDRAFT_171942 [Capitella teleta]
Length = 242
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/191 (83%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVA+GVF AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVANGVFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVDKAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIQVKIMLP 191
>gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis]
Length = 243
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/191 (82%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTAISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +NSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFIDNSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 237
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/194 (80%), Positives = 170/194 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+TQISKKRKFV+DGVF AELNE LTRELAEDGYSGVEV V P+RTEIII ATRTQNVLG
Sbjct: 1 MSTQISKKRKFVSDGVFKAELNEFLTRELAEDGYSGVEVHVAPLRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTSVVQKRF FPENSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 DKGRRIRELTSVVQKRFSFPENSVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLR+IMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRYIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTACRHVLLRQG 180
Query: 181 SLIFVMLISVPVIV 194
L + I +P V
Sbjct: 181 VLGIKVKIMLPFDV 194
>gi|358346770|ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355503373|gb|AES84576.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 237
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/179 (84%), Positives = 167/179 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRK VADGV AE++E L+R LAEDGYSGVE+RVTP+RTEIII+ATRTQ VLG
Sbjct: 1 MATQMSKKRKVVADGVLNAEMHEFLSRVLAEDGYSGVEIRVTPIRTEIIIKATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+++ KRF FPENSV+LYAEKV+NRGLCA AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTTLIHKRFNFPENSVQLYAEKVSNRGLCAAAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFK G M+SSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKHGDMLSSGQPVKDYIDSAVRHVLLRQ 179
>gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis]
gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/191 (81%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFGFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ +G+P Y+D+AVRHV LRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|355752470|gb|EHH56590.1| hypothetical protein EGM_06037 [Macaca fascicularis]
Length = 243
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/191 (83%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE+ YSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEECYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRR RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRTRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864]
Length = 252
Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/193 (82%), Positives = 168/193 (87%), Gaps = 3/193 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKKRKFV DGVF AELNE LTRELAE+GYSGVEVRVTP RTEIIIRATRTQNVLGEK
Sbjct: 4 TPMSKKRKFVTDGVFRAELNEFLTRELAEEGYSGVEVRVTPTRTEIIIRATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFGFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKG EV+VSGKLR QRAK+MKF+DG+M+ SG P YID AVRHVLLRQ L
Sbjct: 124 LRFIMESGAKGVEVVVSGKLRGQRAKAMKFQDGFMVHSGFPTTYYIDRAVRHVLLRQGVL 183
Query: 183 ---IFVMLISVPV 192
+ +ML P
Sbjct: 184 GLKVKIMLAQDPT 196
>gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus]
Length = 245
Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 158/191 (82%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGV VRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVGVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMK DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKSVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus]
Length = 243
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/174 (88%), Positives = 159/174 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 174
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRH
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRH 174
>gi|72058324|ref|XP_798304.1| PREDICTED: 40S ribosomal protein S3-A-like [Strongylocentrotus
purpuratus]
Length = 279
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/179 (86%), Positives = 163/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F EN+VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFAENTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV +Y+D A+RHV+LRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGAPVKDYVDVAIRHVMLRQ 179
>gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
Length = 187
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/179 (85%), Positives = 162/179 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +SKK+KFVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 2 MANPVSKKKKFVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 62 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVAQRGLCAIAQCESLRYKLIGGLAVRRACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQ
Sbjct: 122 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQ 180
>gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299]
gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299]
Length = 233
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/178 (87%), Positives = 164/178 (92%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGE
Sbjct: 3 SGNISKKRKFVADGVFFAELNELLIRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYG
Sbjct: 63 KGRRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIME+GAKG EV+VSGKLR QR K+MKFKDGYMISSG PV EYI+SA HVLLRQ
Sbjct: 123 VLRFIMENGAKGAEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESACLHVLLRQ 180
>gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
Length = 238
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/179 (85%), Positives = 162/179 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KG+RIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 DKGKRIRELTSVVQKRFNFPEGTVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+D A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDCATRHVLLRQ 179
>gi|338726172|ref|XP_003365268.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
Length = 243
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/191 (82%), Positives = 166/191 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKR+FVA G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRQFVAHGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVAKRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRF MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AV HVLLRQ
Sbjct: 121 GVLRFTMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVCHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|386869503|ref|NP_001247435.1| 40S ribosomal protein S3 isoform 2 [Homo sapiens]
gi|397487321|ref|XP_003814751.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Pan paniscus]
Length = 259
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 169/207 (81%), Gaps = 16/207 (7%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVEL----------------YAEKVNNRGLCAIAQAES 104
EKGRRIRELT+VVQKRF FPE SVEL YAEKV RGLCAIAQAES
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAES 120
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV 164
LRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV
Sbjct: 121 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 180
Query: 165 NEYIDSAVRHVLLRQVSLIFVMLISVP 191
N Y+D+AVRHVLLRQ L + I +P
Sbjct: 181 NYYVDTAVRHVLLRQGVLGIKVKIMLP 207
>gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri]
Length = 240
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/191 (81%), Positives = 169/191 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MTSQISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN+VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+++AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus]
Length = 238
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/193 (81%), Positives = 167/193 (86%), Gaps = 3/193 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 4 TTISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNFPEGSVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++AVRHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVETAVRHVLLRQGVL 183
Query: 183 ---IFVMLISVPV 192
+ +ML PV
Sbjct: 184 GIKVKIMLPWDPV 196
>gi|332220518|ref|XP_003259402.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Nomascus
leucogenys]
gi|441635552|ref|XP_003259404.2| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Nomascus
leucogenys]
gi|441635555|ref|XP_004089921.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635558|ref|XP_004089922.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635561|ref|XP_004089923.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635564|ref|XP_004089924.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635567|ref|XP_004089925.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635570|ref|XP_004089926.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635573|ref|XP_004089927.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
Length = 243
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 166/191 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKRKF+ADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MVVQISKKRKFIADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIPELTAVVQKRFGFPEGIVELYAEKVATRGLCAIAQAESLRYKLVGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFI+ESGAKGC+V+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIIESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona
intestinalis]
Length = 260
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE+L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKF ++ VELYAEKV NRGLCA AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG PV EY+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVREYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus]
Length = 248
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/191 (80%), Positives = 166/191 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKRKFVADGVF AELNE L RELAEDGYSGV++RVTP RTEIII ATRTQNVLG
Sbjct: 1 MTRTVSKKRKFVADGVFKAELNEFLMRELAEDGYSGVQIRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFP+ S+ELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPDGSIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P +Y+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPCVDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|412989948|emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]
Length = 233
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 156/184 (84%), Positives = 164/184 (89%), Gaps = 5/184 (2%)
Query: 1 MATQ-----ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRT 55
M TQ ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TPV+ EIIIRATRT
Sbjct: 1 MTTQASSLNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRSTPVKMEIIIRATRT 60
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
QNVLGEKGRRIRELTS+VQKRF F E +VELYAEKV NRGLCAI+Q ESLRYKLLGGLAV
Sbjct: 61 QNVLGEKGRRIRELTSLVQKRFGFAEGAVELYAEKVANRGLCAISQCESLRYKLLGGLAV 120
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
RRACYGVLRFIME+GAKG EVIVSGKLR QRAK+MKFKDGYMISSG PV EYI S+ RHV
Sbjct: 121 RRACYGVLRFIMENGAKGAEVIVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSSTRHV 180
Query: 176 LLRQ 179
LLRQ
Sbjct: 181 LLRQ 184
>gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/194 (79%), Positives = 170/194 (87%), Gaps = 3/194 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+AT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TP+RTEIIIRATRT NVLG
Sbjct: 2 VATAISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRQTPMRTEIIIRATRTANVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQ+RF+ E SVELYAE+VNNRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 62 EKGRRIRELTTLVQRRFQMAEGSVELYAERVNNRGLCAIAQCESLRYKLLGGLAVRRACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLR+IME+GAKG EV+VSGKLR QRAK+MKFKDGYMISSG PV EYI S RH LLRQ
Sbjct: 122 GVLRYIMEAGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSCTRHALLRQG 181
Query: 181 SL---IFVMLISVP 191
++ + +ML P
Sbjct: 182 TIGMRVKIMLDHDP 195
>gi|442755587|gb|JAA69953.1| Putative 40s ribosomal protein s3 [Ixodes ricinus]
Length = 243
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 167/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MANPISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+++AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum]
gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum]
Length = 241
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/191 (80%), Positives = 163/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|389608265|dbj|BAM17744.1| ribosomal protein S3 [Papilio xuthus]
Length = 244
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 164/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|449885323|gb|AGF29412.1| ribosomal protein S3 [Phaedon cochleariae]
Length = 240
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/191 (80%), Positives = 163/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula]
Length = 246
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/191 (80%), Positives = 164/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q SKKRKFVADG+F AELN L+REL+EDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQTSKKRKFVADGIFKAELNNFLSRELSEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FP+ +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPDGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P EYIDSAV HV LRQ
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRGQRAKSMKFVDGFMIHSGFPTKEYIDSAVTHVHLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|221126927|ref|XP_002162713.1| PREDICTED: 40S ribosomal protein S3-like [Hydra magnipapillata]
Length = 239
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/191 (80%), Positives = 164/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+ACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GV+RFIMESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P+ EYID+AVRHV LRQ
Sbjct: 121 GVVRFIMESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|395521196|ref|XP_003764704.1| PREDICTED: 40S ribosomal protein S3 [Sarcophilus harrisii]
Length = 245
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/182 (84%), Positives = 161/182 (88%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIREL
Sbjct: 12 QFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 71
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES
Sbjct: 72 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 131
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLIS 189
GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 191
Query: 190 VP 191
+P
Sbjct: 192 LP 193
>gi|296423595|ref|XP_002841339.1| 40S ribosomal protein S3 [Tuber melanosporum Mel28]
gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum]
Length = 360
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/175 (83%), Positives = 158/175 (90%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 88 ISKRRKFVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 147
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 148 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLR 207
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 208 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDSATRHVLLRQ 262
>gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori]
gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 164/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 161/178 (90%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ Q+SK+RKFVADGVF AE+NE TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 5 SAQLSKRRKFVADGVFNAEINEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRFKFPENS+ELYAEKV NRGL A+AQAESLRYKLLGGLAVRRACYG
Sbjct: 65 KGRRIRELTSLVQKRFKFPENSLELYAEKVQNRGLSAVAQAESLRYKLLGGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAK+MKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPARDFVDQAVRHVLLRQ 182
>gi|452821888|gb|EME28913.1| 40S ribosomal protein S3e [Galdieria sulphuraria]
Length = 227
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/191 (78%), Positives = 170/191 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT +SKKR+ VADGVF AELNE L REL+E+GYSGVEV+ TP+RTEI+IRATRTQNVLG
Sbjct: 1 MATLMSKKRRAVADGVFKAELNEFLMRELSEEGYSGVEVKPTPLRTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF+FPE +VELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFRFPEGTVELYAEKVADRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRF+MESGAKGC V VSG LRAQRAK+MKF DGYM+ SGQPV +Y+D+AVRHVL+RQ
Sbjct: 121 GVLRFVMESGAKGCVVTVSGLLRAQRAKTMKFTDGYMVHSGQPVKDYVDTAVRHVLMRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVTIMLP 191
>gi|1350990|sp|P48153.1|RS3_MANSE RecName: Full=40S ribosomal protein S3
gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta]
Length = 243
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 163/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|357611706|gb|EHJ67618.1| 40S ribosomal protein S3 [Danaus plexippus]
Length = 245
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 164/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus]
Length = 211
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/181 (84%), Positives = 161/181 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I++
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKITL 180
Query: 191 P 191
P
Sbjct: 181 P 181
>gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia]
Length = 243
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 163/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|332375642|gb|AEE62962.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/191 (79%), Positives = 163/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENS+ LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSIVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca]
Length = 233
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/181 (84%), Positives = 160/181 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I +
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 P 191
P
Sbjct: 181 P 181
>gi|389610621|dbj|BAM18922.1| ribosomal protein S3 [Papilio polytes]
Length = 244
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 164/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex]
Length = 242
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/192 (81%), Positives = 166/192 (86%), Gaps = 1/192 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVA GVF AELN LTRELAEDGYSGVEVR+ P RTEIII ATRTQNVL
Sbjct: 1 MATAQISKKRKFVAGGVFKAELNAFLTRELAEDGYSGVEVRLAPTRTEIIILATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFGFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N Y+D+AVRHVLLRQ
Sbjct: 121 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNVYVDTAVRHVLLRQ 180
Query: 180 VSLIFVMLISVP 191
L + I +P
Sbjct: 181 GVLGIKVKIMLP 192
>gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens]
Length = 231
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/191 (79%), Positives = 171/191 (89%), Gaps = 1/191 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADG+F+AELNE+LTRELAEDGY+GVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAT-ISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLG 59
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL+YKLLGGLAVRRACY
Sbjct: 60 EKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACY 119
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GV+RF+MESGAKG EV+VSGKLRAQRAK+MKF DGYMI +G EY+DSAVRHVL+RQ
Sbjct: 120 GVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQG 179
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 180 VLGVKVSIMLP 190
>gi|422293192|gb|EKU20492.1| small subunit ribosomal protein S3e [Nannochloropsis gaditana
CCMP526]
Length = 243
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/191 (78%), Positives = 168/191 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKF+ADGVF+AELNE+LTRELAEDGY+GVEVRV P+RTEIII ATRTQNVLG
Sbjct: 1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELT+V+QKRF FP+ VEL+AEKV +RGLCA AQAESL+YKLLGGLAVRRACY
Sbjct: 61 EKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRF+ME GAKG EVIVSGKLRAQRAKSMKF+DGYMI SGQ EY+D AVRHVL+RQ
Sbjct: 121 GVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGVKVKIMLP 191
>gi|156553282|ref|XP_001599651.1| PREDICTED: 40S ribosomal protein S3-like [Nasonia vitripennis]
Length = 242
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 165/189 (87%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEK
Sbjct: 4 TTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPQRTEIILMATHTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF F ++SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNFKDHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda]
Length = 243
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 163/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPERSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|345570572|gb|EGX53393.1| hypothetical protein AOL_s00006g259 [Arthrobotrys oligospora ATCC
24927]
Length = 270
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/177 (83%), Positives = 159/177 (89%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RK VADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 5 TAISKRRKAVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 65 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 125 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 181
>gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/156 (96%), Positives = 153/156 (98%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF FPEN
Sbjct: 1 MLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENG 60
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLR
Sbjct: 61 VELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLR 120
Query: 144 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 121 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 156
>gi|342356327|gb|AEL28822.1| ribosomal protein S3 [Heliconius melpomene cythera]
Length = 242
Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 163/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|62645168|ref|XP_575143.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
gi|109470011|ref|XP_001057158.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
Length = 243
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 165/191 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYS VEVRVTP RTEIII TRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK+F FPE SVELYAEKV GLCAIAQAESL YKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGA+GCEV+VSGKLR QRAKS+KF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAEGCEVVVSGKLRGQRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|384497979|gb|EIE88470.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 241
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/195 (76%), Positives = 170/195 (87%), Gaps = 3/195 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A QISKKRKFVADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLG
Sbjct: 4 VAAQISKKRKFVADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRRACY
Sbjct: 64 EKGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACY 123
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GV+RF+MESGAKGCEV+VSGK+RA RAK+MKF DG+MI SG P E+I +AVRHV LRQ
Sbjct: 124 GVIRFVMESGAKGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQG 183
Query: 181 SL---IFVMLISVPV 192
L + +ML + P
Sbjct: 184 VLGIKVKIMLDNDPT 198
>gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 241
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 163/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVKIMLP 192
>gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremula]
Length = 240
Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/191 (79%), Positives = 162/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPE SV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPEGSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQ
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|302695173|ref|XP_003037265.1| 40S ribosomal protein S3 [Schizophyllum commune H4-8]
gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
Length = 266
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 161/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELN+ TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAQISKKRKFVADGVFRAELNDFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFVDFAVRHVLLRQ 179
>gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris]
Length = 238
Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/190 (80%), Positives = 163/190 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLGE
Sbjct: 1 AAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+ACYG
Sbjct: 61 KGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
V+RFIMESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P+ EYID+AVRHV LRQ
Sbjct: 121 VVRFIMESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGV 180
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 181 LGIKVKIMLP 190
>gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST]
gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST]
Length = 244
Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 152/191 (79%), Positives = 164/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNTVSKKRRFVANGMFHAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VV+KRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVRKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti]
gi|108875827|gb|EAT40052.1| AAEL008192-PA [Aedes aegypti]
Length = 243
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 152/191 (79%), Positives = 164/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus]
Length = 243
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/191 (79%), Positives = 164/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 161/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E++D AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALEFVDYAVRHVLLRQ 179
>gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus]
Length = 220
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/189 (79%), Positives = 163/189 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGA+GCE +VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 124 LRFIMESGARGCEAVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GIKVEIMLP 192
>gi|170095049|ref|XP_001878745.1| 40S ribosomal protein S3 [Laccaria bicolor S238N-H82]
gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 161/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 179
>gi|426202100|gb|EKV52023.1| hypothetical protein AGABI2DRAFT_239505 [Agaricus bisporus var.
bisporus H97]
Length = 265
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 161/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV E++D AVRHVLL+Q
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQ 179
>gi|340959617|gb|EGS20798.1| 40S ribosomal protein S3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 254
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+ID+A RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAREFIDTATRHVLLRQ 182
>gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 250
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/191 (79%), Positives = 164/191 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNVVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/181 (83%), Positives = 160/181 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I +
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 P 191
P
Sbjct: 181 P 181
>gi|429856532|gb|ELA31437.1| 40s ribosomal protein s3 [Colletotrichum gloeosporioides Nara gc5]
Length = 259
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|380470676|emb|CCF47635.1| 40S ribosomal protein S3 [Colletotrichum higginsianum]
Length = 261
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001]
Length = 261
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|378725981|gb|EHY52440.1| 40S ribosomal protein S3 [Exophiala dermatitidis NIH/UT8656]
Length = 262
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/182 (81%), Positives = 159/182 (87%), Gaps = 3/182 (1%)
Query: 1 MATQ---ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
M TQ ISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MTTQPGAISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
ACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP NE+ID A RHVLL
Sbjct: 121 ACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPANEFIDHATRHVLL 180
Query: 178 RQ 179
RQ
Sbjct: 181 RQ 182
>gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|367049518|ref|XP_003655138.1| 40S ribosomal protein S3 [Thielavia terrestris NRRL 8126]
gi|347002402|gb|AEO68802.1| hypothetical protein THITE_2155431 [Thielavia terrestris NRRL 8126]
Length = 260
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|367027792|ref|XP_003663180.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
gi|347010449|gb|AEO57935.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
Length = 260
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens]
gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens]
Length = 228
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/194 (76%), Positives = 166/194 (85%), Gaps = 3/194 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADG+F AELN L+RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 3 AASISKKRKFVADGIFRAELNNFLSRELAEDGYSGVEVRVTPTRTEIIISATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIREL S++QKRF FPE+SVE+YAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYG
Sbjct: 63 KGRRIRELMSLIQKRFNFPEDSVEIYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLRFIMESGAKGCE++VSGKLR QRAKSMKF DG MI +GQP +Y+D+A+RHV LRQ
Sbjct: 123 VLRFIMESGAKGCEIVVSGKLRGQRAKSMKFVDGLMIHTGQPCVDYVDTAIRHVYLRQGV 182
Query: 182 L---IFVMLISVPV 192
L + +ML + P
Sbjct: 183 LGIKVKIMLPTDPT 196
>gi|336268268|ref|XP_003348899.1| 40S ribosomal protein S3 [Sordaria macrospora k-hell]
gi|380094158|emb|CCC08375.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 262
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|164429154|ref|XP_956174.2| 40S ribosomal protein S3 [Neurospora crassa OR74A]
gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
gi|336470035|gb|EGO58197.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2508]
gi|350290273|gb|EGZ71487.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2509]
Length = 262
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+]
gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+]
Length = 262
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|402086493|gb|EJT81391.1| 40S ribosomal protein S3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 263
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/182 (81%), Positives = 160/182 (87%), Gaps = 3/182 (1%)
Query: 1 MAT---QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MAT QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MATPGAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
ACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLL
Sbjct: 121 ACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLL 180
Query: 178 RQ 179
RQ
Sbjct: 181 RQ 182
>gi|407924047|gb|EKG17107.1| Ribosomal protein S3 [Macrophomina phaseolina MS6]
Length = 265
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 160/178 (89%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV+NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 66 QGRRIRELTSLIQKRFKFPENSVSLYAAKVSNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++ID+A RHVLLRQ
Sbjct: 126 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAHDFIDTATRHVLLRQ 183
>gi|336370495|gb|EGN98835.1| hypothetical protein SERLA73DRAFT_181508 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383275|gb|EGO24424.1| hypothetical protein SERLADRAFT_467690 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 159/179 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAHISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQFRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 179
>gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar]
Length = 244
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 154/191 (80%), Positives = 165/191 (86%), Gaps = 1/191 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF G MI SG PVN Y+D+A+ V +RQ
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVGGLMIHSGDPVNYYVDTAM-EVGIRQG 179
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 180 VLGIKVKIMLP 190
>gi|354501651|ref|XP_003512903.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 247
Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 158/181 (87%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 15 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 74
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLC AQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 75 AVVQKRFGFPEGSVELYAEKVATRGLCGSAQAESLRYKLLGGLAVRRACYGVLRFIMESG 134
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I +
Sbjct: 135 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 194
Query: 191 P 191
P
Sbjct: 195 P 195
>gi|302904072|ref|XP_003048997.1| 40S ribosomal protein S3 [Nectria haematococca mpVI 77-13-4]
gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 260
Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi]
Length = 211
Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/181 (83%), Positives = 159/181 (87%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG KGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGGKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I +
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 P 191
P
Sbjct: 181 P 181
>gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes]
Length = 234
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 162/187 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 8 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIILMATHTQSVLGEKGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 68 RIRELTSVVQKRFGFKDGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P +Y+D+A RHVLLRQ L
Sbjct: 128 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTADYVDTATRHVLLRQGVLGI 187
Query: 185 VMLISVP 191
+ I +P
Sbjct: 188 KVKIMLP 194
>gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|346971436|gb|EGY14888.1| 40S ribosomal protein S3 [Verticillium dahliae VdLs.17]
Length = 262
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 182
>gi|340522228|gb|EGR52461.1| 40s ribosomal protein [Trichoderma reesei QM6a]
Length = 264
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|389751372|gb|EIM92445.1| ribosomal protein S3 [Stereum hirsutum FP-91666 SS1]
Length = 267
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 160/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLA+RRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAIRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 179
>gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae
ARSEF 23]
Length = 257
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+ID+A RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQ 182
>gi|358056010|dbj|GAA98355.1| hypothetical protein E5Q_05041 [Mixia osmundae IAM 14324]
Length = 270
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 159/179 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+T ISK+RKFVADGVF+AEL+E TREL+ +GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSTTISKRRKFVADGVFYAELSEFFTRELSSEGYSGCEVRVTRARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKF E SVELYAEKV NRGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFGEGSVELYAEKVQNRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDQAVRHVLLRQ 179
>gi|430813642|emb|CCJ29017.1| unnamed protein product [Pneumocystis jirovecii]
Length = 412
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A IS FVADGVFFAELNE TREL+ +GYSG EVRVTP RTEIIIRAT TQ+VLG
Sbjct: 165 LANLISLFAMFVADGVFFAELNEFFTRELSAEGYSGTEVRVTPSRTEIIIRATHTQDVLG 224
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS++QKRFKFPE SVELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA Y
Sbjct: 225 EKGRRIRELTSLIQKRFKFPEGSVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAY 284
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 285 GVLRFIMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFIDSATRHVLLRQ 343
>gi|388507388|gb|AFK41760.1| unknown [Lotus japonicus]
Length = 258
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 145/190 (76%), Positives = 168/190 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
AT ISKKRK +ADGVF+AELNE+LTREL E+GYSGVEVRVTP+RTEIIIRATRTQNVLGE
Sbjct: 3 ATNISKKRKIIADGVFYAELNELLTRELGEEGYSGVEVRVTPLRTEIIIRATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRF FPE +VELYAE+V+NR L AIAQAESLR+KLLGGLAVRRACYG
Sbjct: 63 KGRRIRELTSLVQKRFNFPEGNVELYAERVSNRALSAIAQAESLRFKLLGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLR+IME+GAKG E+++SGKLRA RAK+MKF+DGYMI SG VN Y+D AV+H+ L+Q
Sbjct: 123 VLRYIMENGAKGVEIVISGKLRAARAKAMKFRDGYMIKSGDAVNHYVDYAVKHIQLKQGV 182
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 183 LGIKVKIMMP 192
>gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3 [Talaromyces stipitatus ATCC 10500]
gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
Length = 266
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 148/180 (82%), Positives = 159/180 (88%), Gaps = 2/180 (1%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|358383594|gb|EHK21258.1| hypothetical protein TRIVIDRAFT_78477 [Trichoderma virens Gv29-8]
Length = 263
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407]
Length = 264
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/176 (82%), Positives = 157/176 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 7 QISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 67 RRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 127 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3 [Talaromyces marneffei ATCC 18224]
gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Talaromyces marneffei ATCC
18224]
Length = 266
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/180 (82%), Positives = 159/180 (88%), Gaps = 2/180 (1%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 1089
Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 823 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 882
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 883 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 942
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 943 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 1000
>gi|346319548|gb|EGX89149.1| cytoplasmic ribosomal protein subunit S3 [Cordyceps militaris CM01]
Length = 258
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP N++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDSATRHVLLRQ 182
>gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293]
gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3 [Neosartorya fischeri NRRL 181]
gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293]
gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163]
Length = 266
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88]
gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger]
gi|350630615|gb|EHA18987.1| hypothetical protein ASPNIDRAFT_202416 [Aspergillus niger ATCC
1015]
gi|358366728|dbj|GAA83348.1| 40S ribosomal protein S3 [Aspergillus kawachii IFO 4308]
Length = 266
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3 [Aspergillus clavatus NRRL 1]
gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|358397895|gb|EHK47263.1| hypothetical protein TRIATDRAFT_298935 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|293333308|ref|NP_001169131.1| uncharacterized protein LOC100382976 [Zea mays]
gi|223975097|gb|ACN31736.1| unknown [Zea mays]
Length = 266
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/180 (82%), Positives = 158/180 (87%), Gaps = 2/180 (1%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GENGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40]
gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3 [Aspergillus flavus NRRL3357]
gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
gi|391863281|gb|EIT72592.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 266
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-]
gi|6094179|sp|O60128.1|RS3_SCHPO RecName: Full=40S ribosomal protein S3
gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 (predicted) [Schizosaccharomyces pombe]
gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe]
Length = 249
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/190 (76%), Positives = 165/190 (86%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 64 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 124 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGV 183
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 184 LGVKVKIMLP 193
>gi|408397169|gb|EKJ76319.1| hypothetical protein FPSE_03574 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 182
>gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3]
gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC
18188]
Length = 270
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 157/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 182
>gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 270
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 157/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 182
>gi|402244315|emb|CBW52775.1| 40S ribosomal protein S3 [Polytomella sp. Pringsheim 198.80]
Length = 225
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/176 (84%), Positives = 164/176 (93%), Gaps = 2/176 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK +KFV DGVF AELNE+LTRELAEDGYSGVEVR++PVRTEIIIRATRTQNVLGE+G
Sbjct: 15 QISKAKKFVRDGVFRAELNELLTRELAEDGYSGVEVRLSPVRTEIIIRATRTQNVLGEQG 74
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRFK ++V+L+AE+V+ RGLCAIAQAESLRYKLLGGLAVRRACYGVL
Sbjct: 75 RRIRELTSVIQKRFKI--DNVQLFAEEVSARGLCAIAQAESLRYKLLGGLAVRRACYGVL 132
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
R++MESGAKGCEVI+SGKLRAQRAKSMKFKDGYM+SSG YIDSAVRHVLLRQ
Sbjct: 133 RYVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMVSSGNSSRTYIDSAVRHVLLRQ 188
>gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula]
Length = 211
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 158/181 (87%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTR LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRGLAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGRVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I +
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 P 191
P
Sbjct: 181 P 181
>gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
Length = 286
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/174 (86%), Positives = 156/174 (89%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRR
Sbjct: 49 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 108
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT VVQ RF FPE SVELYAEKV RGLCAIAQAESLRY+LLGGLAVRRACYGVLRF
Sbjct: 109 IRELTVVVQTRFGFPEGSVELYAEKVAMRGLCAIAQAESLRYQLLGGLAVRRACYGVLRF 168
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
IMESGAKGCEV+VSGKLR QRA+SMKF G +I SG PVN Y D+AVRHVLLRQ
Sbjct: 169 IMESGAKGCEVVVSGKLRGQRAQSMKFVGGLVIHSGDPVNYYSDTAVRHVLLRQ 222
>gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18]
Length = 270
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 157/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 182
>gi|393218435|gb|EJD03923.1| ribosomal protein S3 [Fomitiporia mediterranea MF3/22]
Length = 264
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 160/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D A RHVLL+Q
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMVHSGQPARDFVDYAYRHVLLKQ 179
>gi|425768995|gb|EKV07505.1| hypothetical protein PDIP_73820 [Penicillium digitatum Pd1]
gi|425770579|gb|EKV09048.1| hypothetical protein PDIG_64480 [Penicillium digitatum PHI26]
Length = 264
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|342874800|gb|EGU76719.1| hypothetical protein FOXB_12740 [Fusarium oxysporum Fo5176]
Length = 260
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 182
>gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR]
Length = 271
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 157/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 182
>gi|392588527|gb|EIW77859.1| 40S ribosomal protein S3 [Coniophora puteana RWD-64-598 SS2]
Length = 267
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 161/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE REL+E+GYSG +VRVT RTEIIIRA+ TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFARELSEEGYSGCDVRVTHARTEIIIRASMTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPEN++ELYAEKV +RGL A+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENALELYAEKVQHRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
G+LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 121 GILRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSKDFVDYAVRHVLLRQ 179
>gi|403173943|ref|XP_003332971.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170763|gb|EFP88552.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/177 (82%), Positives = 158/177 (89%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVFFAEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFFAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 122 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQ 178
>gi|400595104|gb|EJP62914.1| cytoplasmic ribosomal protein subunit S3 [Beauveria bassiana ARSEF
2860]
Length = 257
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP N++ID+A RHVLLRQ
Sbjct: 125 VLRFIMESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDTATRHVLLRQ 182
>gi|390604317|gb|EIN13708.1| ribosomal protein S3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 265
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 160/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENSVELYAEKV RGL AIAQ ESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSVELYAEKVTYRGLSAIAQCESLRYKLLGGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLL+Q
Sbjct: 121 GVLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFVDYAVRHVLLKQ 179
>gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS]
gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3 [Coccidioides posadasii C735 delta SOWgp]
gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira]
gi|392871183|gb|EAS33062.2| 40S ribosomal protein [Coccidioides immitis RS]
Length = 263
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
Length = 246
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/195 (76%), Positives = 168/195 (86%), Gaps = 3/195 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATNISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRF F E SVELYAE++ NRGLC+ AQAESL+Y+LL GLAVRRACY
Sbjct: 61 EKGQRIRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
VLRF+ME+GAKGCEVIVSGKLRAQRAKSMKFK+GYM+ +G EY+D+AVRHVL+RQ
Sbjct: 121 SVLRFVMEAGAKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQG 180
Query: 181 SL---IFVMLISVPV 192
L + +ML P
Sbjct: 181 VLGVKVSIMLPHDPT 195
>gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
Length = 263
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/175 (82%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor]
Length = 250
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/191 (78%), Positives = 161/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFV +G+F AELNE LTR+LAEDGYSGVE+RVTP RTEIII AT+T NVLG
Sbjct: 1 MALPISKKRKFVLNGIFKAELNEFLTRQLAEDGYSGVEIRVTPTRTEIIIMATKTLNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N Y+DSA RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNAYVDSATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|361124160|gb|EHK96273.1| putative 40S ribosomal protein S3 [Glarea lozoyensis 74030]
Length = 263
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 156/178 (87%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 7 GTAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 66
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 67 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 126
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 127 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 184
>gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 262
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 160/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQ
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQ 179
>gi|440639340|gb|ELR09259.1| small subunit ribosomal protein S3e [Geomyces destructans 20631-21]
Length = 262
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKF+ADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFIADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 184
>gi|389625837|ref|XP_003710572.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|351650101|gb|EHA57960.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|440467710|gb|ELQ36909.1| 40S ribosomal protein S3 [Magnaporthe oryzae Y34]
gi|440480625|gb|ELQ61280.1| 40S ribosomal protein S3 [Magnaporthe oryzae P131]
Length = 262
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 AAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFP +SV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 66 QGRRIRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 126 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 183
>gi|451997970|gb|EMD90435.1| hypothetical protein COCHEDRAFT_1157448 [Cochliobolus
heterostrophus C5]
Length = 265
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 156/177 (88%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 182
>gi|340379265|ref|XP_003388147.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/189 (78%), Positives = 160/189 (84%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGC VIVSGKLR QRAKSMKF DG MI +G P YID+AV HV LRQ L
Sbjct: 122 LRFIMESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVL 181
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 182 GIKVQIMLP 190
>gi|451847106|gb|EMD60414.1| hypothetical protein COCSADRAFT_40058 [Cochliobolus sativus ND90Pr]
Length = 265
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 156/177 (88%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 182
>gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143]
Length = 1054
Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 788 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 847
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 848 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 907
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 908 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 965
>gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 164/189 (86%), Gaps = 3/189 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 125 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVL 184
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 185 GIKVKIMLP 193
>gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa]
Length = 211
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/169 (85%), Positives = 154/169 (91%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELNE LTRELAEDGYSGVE+RVTP RTE+II ATRTQNVLGE+GRRIRELT
Sbjct: 1 FVADGVFKAELNEFLTRELAEDGYSGVEIRVTPSRTEVIILATRTQNVLGEEGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SV+QKRF FPE +VELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACYGVLRFIME+G
Sbjct: 61 SVIQKRFDFPEGNVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMENG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D A+RHVLLRQ
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDMAIRHVLLRQ 169
>gi|403178905|ref|XP_003337266.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164530|gb|EFP92847.2| small subunit ribosomal protein S3e [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 341
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/177 (81%), Positives = 158/177 (89%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 78 TTISKRRKFVADGVFYAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 137
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 138 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 197
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 198 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQ 254
>gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 164/189 (86%), Gaps = 3/189 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 125 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVL 184
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 185 GIKVKIMLP 193
>gi|426343098|ref|XP_004038155.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Gorilla gorilla
gorilla]
gi|426343100|ref|XP_004038156.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Gorilla gorilla
gorilla]
gi|426343102|ref|XP_004038157.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Gorilla gorilla
gorilla]
gi|426343104|ref|XP_004038158.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Gorilla gorilla
gorilla]
gi|426343106|ref|XP_004038159.1| PREDICTED: 40S ribosomal protein S3-like isoform 5 [Gorilla gorilla
gorilla]
gi|426343108|ref|XP_004038160.1| PREDICTED: 40S ribosomal protein S3-like isoform 6 [Gorilla gorilla
gorilla]
gi|426343110|ref|XP_004038161.1| PREDICTED: 40S ribosomal protein S3-like isoform 7 [Gorilla gorilla
gorilla]
Length = 243
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/191 (78%), Positives = 161/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKR FV DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQN+ G
Sbjct: 1 MAVQISKKRMFVTDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNIPG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAIVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGC+V+ SGKLR QRAKSMK DG MI S P+N Y+ +AV HVLLRQ
Sbjct: 121 GVLRFIMESGAKGCKVVASGKLRGQRAKSMKSVDGLMIHSRDPINYYVGTAVCHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|335345828|gb|AEH41494.1| 40S ribosomal protein S3 [Endocarpon pusillum]
Length = 264
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/175 (82%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHV LRQ
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVFLRQ 182
>gi|340384078|ref|XP_003390542.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/189 (78%), Positives = 160/189 (84%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGC VIVSGKLR QRAKSMKF DG MI +G P YID+AV HV LRQ L
Sbjct: 122 LRFIMESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVL 181
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 182 GIKVQIMLP 190
>gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330936377|ref|XP_003305367.1| 40S ribosomal protein S3 [Pyrenophora teres f. teres 0-1]
gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
Length = 266
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 156/177 (88%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 182
>gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus]
Length = 242
Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 164/189 (86%), Gaps = 3/189 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 125 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVL 184
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 185 GIKVKIMLP 193
>gi|340710430|ref|XP_003393793.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 163/188 (86%), Gaps = 1/188 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQNVLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQNVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 186 IKVKIMLP 193
>gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans]
Length = 263
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 149/191 (78%), Positives = 162/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 23 MSLTISKKRKFVADGMFKAELNEFLTRELAEDGYSGVEVRVTPARTEIIIMATKTQQVLG 82
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 83 EKGRRIRELTAMVQKRFNFEPGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 142
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ
Sbjct: 143 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 202
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 203 VLGIKVKIMLP 213
>gi|393232568|gb|EJD40148.1| 40S ribosomal protein S3 [Auricularia delicata TFB-10046 SS5]
Length = 264
Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 162/179 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT T+ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTREVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELT+++QKRFKFPENS+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 DKGRRIRELTALIQKRFKFPENSLELYAEKVMHRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++DSAVRHV+L+Q
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSRDFVDSAVRHVMLKQ 179
>gi|402221674|gb|EJU01742.1| 40S ribosomal protein S3 [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 158/178 (88%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+T ISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 11 STTISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 70
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRACYG
Sbjct: 71 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYG 130
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRF+MES AKGCEVIVSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 131 VLRFVMESEAKGCEVIVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 188
>gi|403415257|emb|CCM01957.1| predicted protein [Fibroporia radiculosa]
Length = 260
Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 160/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MTSQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV +RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQSRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQ
Sbjct: 121 GVLRFVMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFVDYAVRHVMLRQ 179
>gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta]
Length = 257
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 164/189 (86%), Gaps = 3/189 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 21 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 80
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 81 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 139
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 140 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVL 199
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 200 GIKVKIMLP 208
>gi|396493922|ref|XP_003844188.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
Length = 264
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 156/177 (88%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 SAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 182
>gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator]
Length = 242
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 155/193 (80%), Positives = 166/193 (86%), Gaps = 6/193 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVAVRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 125 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVL 184
Query: 183 ---IFVMLISVPV 192
+ +ML PV
Sbjct: 185 GIKVKIMLPWDPV 197
>gi|449017871|dbj|BAM81273.1| 40S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 262
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/188 (77%), Positives = 165/188 (87%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+S KRKFVADGVFFAEL+E+LTRELAEDGY+GVEVRVTP E+IIRATRTQ VLGEKG
Sbjct: 7 QVSWKRKFVADGVFFAELSELLTRELAEDGYAGVEVRVTPRGHEVIIRATRTQTVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V+KRF FPEN V L+ E+V NRGLCA+AQAESLRYKLLGGLAVRRA YGVL
Sbjct: 67 RRIRELTALVEKRFGFPENQVSLFVERVPNRGLCAMAQAESLRYKLLGGLAVRRAAYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RF+MESGAKGCEV +SGKLRAQRAK+MKF DGYMIS+GQP ++ID AVRHVLLRQ L
Sbjct: 127 RFVMESGAKGCEVQISGKLRAQRAKTMKFMDGYMISTGQPKLDFIDRAVRHVLLRQGVLG 186
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 187 IKVKIMLP 194
>gi|354473311|ref|XP_003498879.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 240
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/191 (80%), Positives = 161/191 (84%), Gaps = 3/191 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRE D Y GVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRE---DSYLGVEVRVTPTRTEIIILATRTQNVLG 57
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG RIRELT+VVQKRF FPE SVELYAEKV R LCAIAQAESLRYKLLGGLAVR ACY
Sbjct: 58 EKGPRIRELTAVVQKRFGFPEGSVELYAEKVATRRLCAIAQAESLRYKLLGGLAVRSACY 117
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVR+VLLRQ
Sbjct: 118 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRYVLLRQA 177
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 178 VLGIKVKIMLP 188
>gi|409083492|gb|EKM83849.1| hypothetical protein AGABI1DRAFT_32206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 673
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 156/173 (90%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLGEKGRRI
Sbjct: 415 KKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRI 474
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACYGVLRF+
Sbjct: 475 RELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFV 534
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV E++D AVRHVLL+Q
Sbjct: 535 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQ 587
>gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818]
gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQ 183
>gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
Length = 251
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/190 (76%), Positives = 164/190 (86%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 3 ALTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 123 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQGV 182
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 183 LGVKVKIMLP 192
>gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1]
Length = 255
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 3 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 62
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 63 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 122
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 123 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 177
>gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
Length = 266
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQ 183
>gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi]
gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi]
Length = 246
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/191 (77%), Positives = 161/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 183 VLGIKVKIMLP 193
>gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina
98AG31]
Length = 269
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 158/177 (89%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TREL+E+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFYAELSEFFTRELSEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 122 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPCVDFVDQAVRHVLLRQ 178
>gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis]
gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis]
Length = 246
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/191 (77%), Positives = 161/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 183 VLGIKVKIMLP 193
>gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis]
Length = 244
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/191 (77%), Positives = 161/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis]
gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis]
Length = 246
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/191 (77%), Positives = 161/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 183 VLGIKVKIMLP 193
>gi|315055209|ref|XP_003176979.1| 40S ribosomal protein S3 [Arthroderma gypseum CBS 118893]
gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
Length = 266
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQ 183
>gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
Length = 266
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQ 183
>gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi]
Length = 278
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/181 (82%), Positives = 157/181 (86%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 46 FVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELT 105
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SVVQKRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESG
Sbjct: 106 SVVQKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 165
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQ L + I +
Sbjct: 166 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIML 225
Query: 191 P 191
P
Sbjct: 226 P 226
>gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
Length = 266
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/182 (80%), Positives = 158/182 (86%), Gaps = 3/182 (1%)
Query: 1 MATQ---ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MAT ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MATTQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
ACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLL
Sbjct: 121 ACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDEATRHVLL 180
Query: 178 RQ 179
RQ
Sbjct: 181 RQ 182
>gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
gi|347836345|emb|CCD50917.1| similar to 40S ribosomal protein S3 [Botryotinia fuckeliana]
Length = 263
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/175 (81%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLL+Q
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQ 184
>gi|388853822|emb|CCF52543.1| probable 40S ribosomal protein S3 [Ustilago hordei]
Length = 258
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 159/178 (89%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVL++Q
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQ 180
>gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|403182936|gb|EJY57732.1| AAEL008192-PB [Aedes aegypti]
Length = 256
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/183 (80%), Positives = 159/183 (86%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
R+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRE
Sbjct: 22 RQFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRE 81
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIME
Sbjct: 82 LTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 141
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLI 188
SGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQ L + I
Sbjct: 142 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKI 201
Query: 189 SVP 191
+P
Sbjct: 202 MLP 204
>gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni]
gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni]
Length = 244
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/191 (77%), Positives = 161/191 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLTISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 181 VLGIKVKIMLP 191
>gi|383851993|ref|XP_003701515.1| PREDICTED: 40S ribosomal protein S3-like [Megachile rotundata]
Length = 242
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 163/188 (86%), Gaps = 1/188 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 186 IKVKIMLP 193
>gi|392571524|gb|EIW64696.1| 40S ribosomal protein S3 [Trametes versicolor FP-101664 SS1]
Length = 261
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 160/179 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFP+NS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPDNSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQ
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQ 179
>gi|340710439|ref|XP_003393797.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 163/188 (86%), Gaps = 1/188 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 186 IKVKIMLP 193
>gi|156051430|ref|XP_001591676.1| 40S ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 263
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/175 (81%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLL+Q
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQ 184
>gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera]
gi|380026164|ref|XP_003696828.1| PREDICTED: 40S ribosomal protein S3-like [Apis florea]
Length = 242
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 163/188 (86%), Gaps = 1/188 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 186 IKVKIMLP 193
>gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 222
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/187 (77%), Positives = 167/187 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+
Sbjct: 1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQ 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FP+++VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLR
Sbjct: 61 RIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
FIMESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +Y+D AVRHV++RQ L
Sbjct: 121 FIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGV 180
Query: 185 VMLISVP 191
+ I +P
Sbjct: 181 TVSIMLP 187
>gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae]
gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis]
gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae]
gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis]
Length = 246
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 160/187 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 VMLISVP 191
+ I +P
Sbjct: 187 KVKIMLP 193
>gi|350427313|ref|XP_003494719.1| PREDICTED: 40S ribosomal protein S3-like [Bombus impatiens]
Length = 242
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 163/188 (86%), Gaps = 1/188 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQ L
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 186 IKVKIMLP 193
>gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga]
Length = 215
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/193 (76%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT ISKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANISKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV RGLCAIAQAESLRYKL+GGL VRRA
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVTRGLCAIAQAESLRYKLMGGLPVRRA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
CYGVLRFIMESGA+GCE+IVSGKLR QRAK+MKF DG MI SG PVN+Y+ AVRHVLLR
Sbjct: 121 CYGVLRFIMESGAQGCEIIVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQYAVRHVLLR 180
Query: 179 QVSLIFVMLISVP 191
Q L + I +P
Sbjct: 181 QGVLGIKVKIMLP 193
>gi|343429784|emb|CBQ73356.1| probable 40S ribosomal protein S3 [Sporisorium reilianum SRZ2]
Length = 252
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 159/178 (89%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVL++Q
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQ 180
>gi|443898722|dbj|GAC76056.1| phosphatidylserine decarboxylase [Pseudozyma antarctica T-34]
Length = 252
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 159/178 (89%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVL++Q
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQ 180
>gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba]
gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba]
Length = 246
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/190 (77%), Positives = 161/190 (84%), Gaps = 3/190 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL-- 182
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 183 -IFVMLISVP 191
+ VML P
Sbjct: 187 KVKVMLPYDP 196
>gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia]
gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans]
gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia]
gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans]
Length = 246
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/190 (77%), Positives = 162/190 (85%), Gaps = 3/190 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV +RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVASRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL-- 182
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 183 -IFVMLISVP 191
+ VML P
Sbjct: 187 KVKVMLPYDP 196
>gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 215
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 160/187 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 VMLISVP 191
+ + +P
Sbjct: 187 KVKVMLP 193
>gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta]
gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta]
Length = 246
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/190 (77%), Positives = 161/190 (84%), Gaps = 3/190 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RG+CAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGICAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL-- 182
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 183 -IFVMLISVP 191
+ VML P
Sbjct: 187 KVKVMLPYDP 196
>gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster]
gi|548856|sp|Q06559.1|RS3_DROME RecName: Full=40S ribosomal protein S3
gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila
melanogaster]
gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster]
gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster]
gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct]
gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct]
gi|346426335|gb|AEO27696.1| RpS3-PA [Drosophila melanogaster]
Length = 246
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/190 (77%), Positives = 161/190 (84%), Gaps = 3/190 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL-- 182
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 183 -IFVMLISVP 191
+ VML P
Sbjct: 187 KVKVMLPYDP 196
>gi|357016985|gb|AET50521.1| hypothetical protein [Eimeria tenella]
Length = 233
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 159/177 (89%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE L+R LAEDGYSGVEVRVTP+RTEIIIRATRT+ VLGEK
Sbjct: 5 TNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRF FP +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 65 GRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LR IMESGAKGCEV+VSGKLRAQRAKSMKF+DGY+IS+G+P ++ A+R V LRQ
Sbjct: 125 LRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQ 181
>gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster]
Length = 253
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/190 (77%), Positives = 161/190 (84%), Gaps = 3/190 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 14 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 74 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 133
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL-- 182
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 134 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 193
Query: 183 -IFVMLISVP 191
+ VML P
Sbjct: 194 KVKVMLPYDP 203
>gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/193 (74%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT +SKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANVSKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV +RGLCAIAQAESLRYKL+GG VRRA
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVSRGLCAIAQAESLRYKLMGGFPVRRA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
CYGVLRFIM+SGA+GCE++VSGKLR QRAK+MKF DG MI SG PVN+Y+ AVRHVLLR
Sbjct: 121 CYGVLRFIMDSGAQGCEIVVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQFAVRHVLLR 180
Query: 179 QVSLIFVMLISVP 191
Q L + I +P
Sbjct: 181 QGVLGIKVKIMLP 193
>gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum]
Length = 249
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/190 (77%), Positives = 160/190 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QI+KKRK V DGVF AELN L +ELAEDGYSGVEVR TP R E+II ATRTQ+VLGE
Sbjct: 4 AQQITKKRKAVQDGVFKAELNNFLMKELAEDGYSGVEVRRTPARAEVIIMATRTQSVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYG
Sbjct: 64 RGRRIRELTSVVQKRFGFAEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLRFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQ
Sbjct: 124 VLRFIMESSAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGV 183
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 184 LGIKVKIMLP 193
>gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
Length = 246
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/194 (73%), Positives = 166/194 (85%), Gaps = 3/194 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRRACY
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
V+RF+ME+GAKG +VIVSGKLRAQRAK+MKF +GYM+ +G EY+D+AVRHVL+RQ
Sbjct: 121 SVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQG 180
Query: 181 SL---IFVMLISVP 191
L + +ML P
Sbjct: 181 VLGVKVSIMLPHDP 194
>gi|349803955|gb|AEQ17450.1| putative ribosomal protein s3 [Hymenochirus curtipes]
Length = 235
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/191 (78%), Positives = 158/191 (82%), Gaps = 11/191 (5%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ LAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQ-----------LAVRRACY 109
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 110 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 169
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 170 VLGIKVKIMLP 180
>gi|348670844|gb|EGZ10665.1| hypothetical protein PHYSODRAFT_287105 [Phytophthora sojae]
Length = 249
Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/194 (73%), Positives = 166/194 (85%), Gaps = 3/194 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRRACY
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
V+RF+ME+GAKG +VIVSGKLRAQRAK+MKF +GYM+ +G EY+D+AVRHVL+RQ
Sbjct: 121 SVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQG 180
Query: 181 SL---IFVMLISVP 191
L + +ML P
Sbjct: 181 VLGVKVSIMLPHDP 194
>gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66]
gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66]
Length = 221
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/192 (76%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKFV DGVF AELNE L+ LAEDGY+GVEVRVTP+RTEIIIRATRT+ VL
Sbjct: 1 MAPQVISKKRKFVNDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIRTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS+VQKRF FP SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLVQKRFNFPAGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYMI++GQP +Y+D AVR+VL++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDYVDKAVRNVLMKQ 180
Query: 180 VSLIFVMLISVP 191
L + I +P
Sbjct: 181 GVLGVQVKIMLP 192
>gi|452988654|gb|EME88409.1| hypothetical protein MYCFIDRAFT_70441 [Pseudocercospora fijiensis
CIRAD86]
Length = 273
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/175 (79%), Positives = 153/175 (87%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 15 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 74
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 75 RIRELTSLITHRFKFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 134
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 135 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 189
>gi|397567805|gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira oceanica]
Length = 266
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/193 (74%), Positives = 164/193 (84%), Gaps = 2/193 (1%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT ++S KRKFVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNV
Sbjct: 2 MATRAKMSTKRKFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNV 61
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKG+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRRA
Sbjct: 62 LGEKGQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRA 121
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
CYGV+RF+ME+ AKGCEVIVSGKLR QRAK+MKF DGYMI +G Y D+AVRHV +R
Sbjct: 122 CYGVVRFVMEASAKGCEVIVSGKLRGQRAKAMKFGDGYMIKTGHAGQVYTDTAVRHVAMR 181
Query: 179 QVSLIFVMLISVP 191
Q + + I +P
Sbjct: 182 QGMIGIKVSIMLP 194
>gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum]
Length = 221
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 168/192 (87%), Gaps = 1/192 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYMI++GQP +++D AVR+V+++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQ 180
Query: 180 VSLIFVMLISVP 191
L + I +P
Sbjct: 181 GVLGVQVKIMLP 192
>gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502]
gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis]
Length = 221
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 168/192 (87%), Gaps = 1/192 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYMI++GQP +++D AVR+V+++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQ 180
Query: 180 VSLIFVMLISVP 191
L + I +P
Sbjct: 181 GVLGVQVKIMLP 192
>gi|401881615|gb|EJT45911.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 2479]
gi|406702723|gb|EKD05674.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 8904]
Length = 248
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/179 (78%), Positives = 158/179 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A Q+SKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 3 VAHQVSKKRKFVADGVFQAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+GRRIREL ++V+KRF+FPENS+ELYAEKV RGL A+AQAESLRYKLLGGLA+RRACY
Sbjct: 63 HQGRRIRELKALVEKRFRFPENSLELYAEKVQYRGLSAVAQAESLRYKLLGGLAMRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLR++MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQP ++ID AVRHVLLRQ
Sbjct: 123 GVLRYVMESGAKGCEVVVSGKLRAARAKSMKFSDGFLIHSGQPSVDFIDYAVRHVLLRQ 181
>gi|379994413|gb|AFD22833.1| 40S ribosomal protein S3 [Collodictyon triciliatum]
Length = 173
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/173 (79%), Positives = 156/173 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ +ISKK+KFVADGVFFAELNE TR+L EDGY+GVEVRVTP RTE+IIRATRTQNVLG
Sbjct: 1 MSLEISKKKKFVADGVFFAELNEFFTRQLGEDGYAGVEVRVTPARTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTS+VQKRF+F E ++EL+AE V++RGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 DKGRRIRELTSLVQKRFRFKEGTIELFAENVSSRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
GV+RF ME+GAKG EV VSGKLRAQRAK MKF+DGYMI SG P Y+DSAVR
Sbjct: 121 GVMRFAMEAGAKGVEVAVSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVR 173
>gi|393905484|gb|EFO25530.2| 40S ribosomal protein S3 [Loa loa]
Length = 250
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/188 (77%), Positives = 158/188 (84%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQ L
Sbjct: 127 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 186
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 187 IKVKIMLP 194
>gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa]
Length = 249
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/188 (77%), Positives = 158/188 (84%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 6 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQ L
Sbjct: 126 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 185
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 186 IKVKIMLP 193
>gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala]
Length = 170
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/170 (82%), Positives = 152/170 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT NVLG
Sbjct: 1 MATRISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVR+ACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRQACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDS 170
GVLRFIMESGA GCEV+VSGKLR QRAK++KF DG MI G+P N+Y ++
Sbjct: 121 GVLRFIMESGANGCEVVVSGKLRGQRAKALKFVDGLMIHRGEPTNDYAET 170
>gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 264
Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/175 (80%), Positives = 152/175 (86%), Gaps = 2/175 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+I T TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDI--STTHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 66 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 126 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 180
>gi|453089728|gb|EMF17768.1| ribosomal protein S3 [Mycosphaerella populorum SO2202]
Length = 276
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/176 (78%), Positives = 153/176 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 14 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 73
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 74 RRIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 133
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 134 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 189
>gi|353240330|emb|CCA72204.1| probable 40S ribosomal protein S3 [Piriformospora indica DSM 11827]
Length = 268
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 141/179 (78%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AEL E RELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELGEFFMRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFPE S+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTSLVQKRFKFPEGSLELYAEKVLHRGLSAVAQCESLRYKLLGGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MES AKGCEV++SGKLRA RAKSMKF +G+MI SGQP +++D AVRHV+LRQ
Sbjct: 121 GVLRFVMESNAKGCEVVISGKLRAARAKSMKFTEGFMIHSGQPARDFVDEAVRHVMLRQ 179
>gi|384483178|gb|EIE75358.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 231
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 140/184 (76%), Positives = 160/184 (86%), Gaps = 3/184 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGEKGRRIRELT+
Sbjct: 4 VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGEKGRRIRELTT 63
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRRACYGV+RF+MESGA
Sbjct: 64 LVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACYGVIRFVMESGA 123
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL---IFVMLI 188
KGCEV+VSGK+RA RAK+MKF DG+MI SG P E+I +AVRHV LRQ L + +ML
Sbjct: 124 KGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQGVLGIKVKIMLD 183
Query: 189 SVPV 192
+ P
Sbjct: 184 NDPT 187
>gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1]
Length = 252
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 139/188 (73%), Positives = 162/188 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF AELNE+ RELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKG
Sbjct: 5 QMSKKRKFVADGVFKAELNELFMRELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT+ +QKRF F ++ VEL+AEKV NRGLCA+AQ E+LRYKL GGLAVRRACYGV+
Sbjct: 65 RRIRELTAFIQKRFGFQKDEVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVV 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RF+MESGAKGCEVIVSGKLRAQRAK+MKF DG+MISSG P EYID+AVRHV +RQ +
Sbjct: 125 RFVMESGAKGCEVIVSGKLRAQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIG 184
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 185 IKVKIMLP 192
>gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 288 bits (736), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 161/180 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQV L+
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQVFLV 188
>gi|398398591|ref|XP_003852753.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
gi|339472634|gb|EGP87729.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
Length = 265
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/176 (78%), Positives = 152/176 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 5 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 65 RRIRELTSLITHRFKFPADSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 125 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 180
>gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102]
Length = 255
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/168 (82%), Positives = 150/168 (89%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE+GRRIRELTS
Sbjct: 13 VADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRRIRELTS 72
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIMESGA
Sbjct: 73 LIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESGA 132
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
KGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+ID+A RHVLLRQ
Sbjct: 133 KGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQ 180
>gi|388579652|gb|EIM19973.1| 40S ribosomal protein S3 [Wallemia sebi CBS 633.66]
Length = 244
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/176 (79%), Positives = 156/176 (88%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SK RK V DGVF AEL E TREL+E+G+SG EVRVT RTEIIIRAT TQ VLGEKG
Sbjct: 7 QLSKSRKIVQDGVFQAELIEFFTRELSEEGFSGCEVRVTHARTEIIIRATHTQEVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRACYGV+
Sbjct: 67 RRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYGVV 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGAKGCEV+VSGKLRA RAK+MKF DG+MI SGQPV +++D AVRHVLL+Q
Sbjct: 127 RFIMESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPVRDFVDFAVRHVLLKQ 182
>gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi]
gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi]
Length = 250
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/188 (76%), Positives = 158/188 (84%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 EMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQ L
Sbjct: 127 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 186
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 187 IKVKIMLP 194
>gi|359492651|ref|XP_003634450.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-1-like
[Vitis vinifera]
Length = 246
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/176 (81%), Positives = 155/176 (88%), Gaps = 5/176 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQ+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTP+ TEIIIRAT+T NVLG
Sbjct: 1 MVTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG++I+ELTSVVQKRF+F ENSVEL AEKVNNRG AIAQAESLRYKLLGG CY
Sbjct: 61 EKGKKIKELTSVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLGG-----XCY 115
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVL 176
GVLRF+MESGAKGCEVIVSGKL AQRAKSMKFKDGY+ISSGQPV +YID AVRHVL
Sbjct: 116 GVLRFVMESGAKGCEVIVSGKLCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHVL 171
>gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 161/189 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+++S KR+FVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNVLGEK
Sbjct: 7 SKMSIKRRFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNVLGEK 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRRACYGV
Sbjct: 67 GQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGV 126
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
+RF+ME+ AKGCEVIVSGKLR QRAK MKF DGYMI +G Y D AVRHVL+RQ +
Sbjct: 127 VRFVMEASAKGCEVIVSGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVLMRQGVI 186
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 187 GIKVAIMLP 195
>gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 158/176 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 158/176 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106179|ref|XP_778100.1| 40S ribosomal protein S3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276]
gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276]
gi|405117477|gb|AFR92252.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii H99]
Length = 252
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF AELN+ TRELAE+GY+G EVRVT RTEIIIRAT TQ VLG+KGR
Sbjct: 7 ISKRRKFVADGVFQAELNDFFTRELAEEGYAGCEVRVTHARTEIIIRATHTQEVLGDKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIREL ++++KRFKFPEN++ELYAEKV RGL A AQAESLRYKLLGGLA+RRACYGVLR
Sbjct: 67 RIRELKALIEKRFKFPENALELYAEKVQYRGLSATAQAESLRYKLLGGLAMRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F+MESGAKGCEV+VSGKLRA RAKSMKF +G+M+ SGQP ++ID AVRHVLLRQ
Sbjct: 127 FVMESGAKGCEVVVSGKLRAARAKSMKFTEGFMVHSGQPARDFIDYAVRHVLLRQ 181
>gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum]
gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum]
Length = 245
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/190 (73%), Positives = 159/190 (83%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A S K++FV+DG+ AELNE LTRELAEDGYSGV+VR P RTEI+I ATRTQNVLG+
Sbjct: 3 AKTTSVKKRFVSDGMLRAELNEFLTRELAEDGYSGVDVRAAPSRTEIVISATRTQNVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS++QKRF F + +VEL+AEKV RGLCA+AQAESLRYKL+GGLAVRRACYG
Sbjct: 63 KGRRIRELTSLIQKRFDFKDKAVELFAEKVAQRGLCAVAQAESLRYKLIGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQ
Sbjct: 123 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNVATRHVLLRQGV 182
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 183 LGIKVKIMLP 192
>gi|403223989|dbj|BAM42119.1| 40S ribosomal protein S3 [Theileria orientalis strain Shintoku]
Length = 216
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 162/186 (87%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFV 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP +Y+++AVR V LRQ L
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQQYVNTAVRSVQLRQGVLGIK 187
Query: 186 MLISVP 191
+ I +P
Sbjct: 188 VKIMLP 193
>gi|452848046|gb|EME49978.1| hypothetical protein DOTSEDRAFT_122074 [Dothistroma septosporum
NZE10]
Length = 266
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 152/176 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 5 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 65 RRIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 125 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 180
>gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara]
gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata]
Length = 216
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 162/186 (87%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 7 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 66
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RRA YGVLR
Sbjct: 67 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 126
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFV 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP EY+++AVR V LRQ L
Sbjct: 127 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIK 186
Query: 186 MLISVP 191
+ I +P
Sbjct: 187 VKIMLP 192
>gi|392572589|gb|EIW65734.1| hypothetical protein TREMEDRAFT_41205 [Tremella mesenterica DSM
1558]
Length = 249
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 153/178 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ QISKKRKF+ADGVF AEL E T ELA++GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 4 SAQISKKRKFIADGVFQAELGEFFTHELADEGYSGCEVRVTHARTEIIIRATHTQEVLGA 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
GRRIREL S+V KRFKFPENS+ELYAE+V RGL A+AQAESLRYKLLGGLA+RRACYG
Sbjct: 64 NGRRIRELRSLVMKRFKFPENSLELYAERVQYRGLSAVAQAESLRYKLLGGLAMRRACYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG MI SGQP +Y+D AVRHVLLRQ
Sbjct: 124 VLRFVMESGAKGCEVVVSGKLRAARAKSMKFVDGLMIHSGQPAKDYVDYAVRHVLLRQ 181
>gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga]
gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva]
Length = 216
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 162/186 (87%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFV 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP EY+++AVR V LRQ L
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIK 187
Query: 186 MLISVP 191
+ I +P
Sbjct: 188 VKIMLP 193
>gi|405973234|gb|EKC37958.1| 40S ribosomal protein S3 [Crassostrea gigas]
Length = 237
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/181 (79%), Positives = 153/181 (84%), Gaps = 8/181 (4%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 17 FVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 76
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SVVQKRF FPE +VE RGLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESG
Sbjct: 77 SVVQKRFNFPEGTVE--------RGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 128
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISV 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQ L + I +
Sbjct: 129 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKVKIML 188
Query: 191 P 191
P
Sbjct: 189 P 189
>gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster]
Length = 246
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/190 (76%), Positives = 158/190 (83%), Gaps = 3/190 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP TEIII AT+TQ VL EKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL G LAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL-- 182
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 183 -IFVMLISVP 191
+ VML P
Sbjct: 187 KVKVMLPYDP 196
>gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 200
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 158/176 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1]
Length = 255
Score = 285 bits (728), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 144/191 (75%), Positives = 162/191 (84%), Gaps = 3/191 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KG
Sbjct: 26 QTCKKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKG 85
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVL
Sbjct: 86 RRIRELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 145
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL- 182
R IMESGAKGCEV+VSGKLRAQRAKSMKFKDGY+IS+G+P ++D A+R V LRQ L
Sbjct: 146 RHIMESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLG 205
Query: 183 --IFVMLISVP 191
+ +ML P
Sbjct: 206 VRVKIMLPHDP 216
>gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 285 bits (728), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 158/176 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|449304480|gb|EMD00487.1| hypothetical protein BAUCODRAFT_99745 [Baudoinia compniacensis UAMH
10762]
Length = 282
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/175 (77%), Positives = 151/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 16 VSKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 75
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++ RF+FP SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 76 RIRELTSLITHRFRFPPESVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 135
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 136 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFIDHATRHVLLRQ 190
>gi|429329723|gb|AFZ81482.1| 40S ribosomal protein S3, putative [Babesia equi]
Length = 218
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/174 (80%), Positives = 154/174 (88%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK++KF+ DGVF AELNE L R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKKFINDGVFNAELNEFLARTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP Y+ +AVR V LRQ
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQAYVSTAVRSVQLRQ 181
>gi|399216964|emb|CCF73651.1| unnamed protein product [Babesia microti strain RI]
Length = 218
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 161/189 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKK KF+ DG+F AELNE L+R LAEDGYSGVEVR TPV+TE+IIRATRT+ VLGEK
Sbjct: 4 AQISKKCKFINDGIFHAELNEFLSRSLAEDGYSGVEVRATPVKTEVIIRATRTREVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRF F +SVELYAE++ +RGLCA+AQAESLRYKLL GLAVRRA YGV
Sbjct: 64 GRRIRELTSLVQKRFGFAPDSVELYAERIEHRGLCAMAQAESLRYKLLKGLAVRRAAYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LR IMESGA GCE+I+SGKLRAQRAKSMKFKDGY+IS+G+P +YI+SA R V LRQ L
Sbjct: 124 LRHIMESGANGCEIIISGKLRAQRAKSMKFKDGYLISTGEPSKQYINSATRSVQLRQGVL 183
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 184 GVKVKIMLP 192
>gi|401408051|ref|XP_003883474.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
Length = 235
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 161/188 (85%), Gaps = 3/188 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVLR I
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL---I 183
MESGAKGCEV+VSGKLRAQRAKSMKFKDGY+IS+G+P ++D A+R V LRQ L +
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 184 FVMLISVP 191
+ML P
Sbjct: 189 KIMLPHDP 196
>gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/176 (79%), Positives = 155/176 (88%), Gaps = 1/176 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKR+FVADGVF +ELNE L R L E GY+GVEVR TP RTEIII ATRTQ VLGEKG
Sbjct: 5 QMSKKRQFVADGVFKSELNEFLQRSLGEQGYAGVEVRKTPNRTEIIILATRTQEVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT +V+KRF F +N VEL+AEKV NRGLCA+AQ ESLRYKLLGGLAVRRACYGVL
Sbjct: 65 RRIRELTGLVKKRFGFKDN-VELFAEKVANRGLCAMAQCESLRYKLLGGLAVRRACYGVL 123
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
R +MESGAKGCEVI+SGKLRAQRAKSMKF DG+MIS+G P +YID+AVRHVLLRQ
Sbjct: 124 RLVMESGAKGCEVIISGKLRAQRAKSMKFNDGFMISAGHPTRDYIDTAVRHVLLRQ 179
>gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG]
Length = 235
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 161/188 (85%), Gaps = 3/188 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVLR I
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL---I 183
MESGAKGCEV+VSGKLRAQRAKSMKFKDGY+IS+G+P ++D A+R V LRQ L +
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 184 FVMLISVP 191
+ML P
Sbjct: 189 KIMLPHDP 196
>gi|367008326|ref|XP_003678663.1| 40S ribosomal protein S3 [Torulaspora delbrueckii]
gi|359746320|emb|CCE89452.1| hypothetical protein TDEL_0A01200 [Torulaspora delbrueckii]
Length = 245
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQPVN++ID+A RHVLLRQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDTATRHVLLRQ 179
>gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi]
gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi]
Length = 220
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/195 (73%), Positives = 163/195 (83%), Gaps = 1/195 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KG
Sbjct: 2 QISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKG 61
Query: 64 RRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRIRELTS+VQKRF NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 62 RRIRELTSLVQKRFFNKSTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+G+P ++++A R L+Q L
Sbjct: 122 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGEPSKRFVNTATRSAQLKQGVL 181
Query: 183 IFVMLISVPVIVLER 197
+ I +P + R
Sbjct: 182 GIKVKIMLPTAIDTR 196
>gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 281 bits (719), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/175 (77%), Positives = 153/175 (87%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S KRKFVADGVF+AELNE+LT ELAE+GY+GVEVR TP RTE+IIRATRTQNVLGE R
Sbjct: 1 MSVKRKFVADGVFYAELNELLTAELAEEGYAGVEVRTTPHRTELIIRATRTQNVLGENNR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL++KLLGGLAVRRACYGV+R
Sbjct: 61 RIRELTSVVQKRFNFADGAVELYAERVQNRGLCAQAQAESLKFKLLGGLAVRRACYGVVR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F+ME+ AKGCEV+V+GKLR QRAK MKF DGYMI +G Y DSAVRHVL+RQ
Sbjct: 121 FVMEAQAKGCEVVVTGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDSAVRHVLMRQ 175
>gi|410075477|ref|XP_003955321.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
gi|372461903|emb|CCF56186.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
Length = 241
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+RF+MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQPVN++ID A RHVL+RQ
Sbjct: 121 GVVRFVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDIATRHVLMRQ 179
>gi|366995337|ref|XP_003677432.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
gi|342303301|emb|CCC71079.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
Length = 244
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFSDGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|346466617|gb|AEO33153.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/173 (80%), Positives = 152/173 (87%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLGEKGRRIRELTSVVQKRF
Sbjct: 31 AELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLGEKGRRIRELTSVVQKRFN 90
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+V
Sbjct: 91 FPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVV 150
Query: 139 SGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
SGKLR QRAKSMKF DG MI SG+P N+Y+++AVRHVLLRQ L + I +P
Sbjct: 151 SGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLP 203
>gi|401623905|gb|EJS41984.1| rps3p [Saccharomyces arboricola H-6]
Length = 240
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|398364505|ref|NP_014221.3| ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae S288c]
gi|1173255|sp|P05750.5|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13;
AltName: Full=YS3
gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506099|pdb|3U5C|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506137|pdb|3U5G|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae]
gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae]
gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae]
gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789]
gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a]
gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291]
gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118]
gi|285814479|tpg|DAA10373.1| TPA: ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae
S288c]
gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796]
gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13]
gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3]
gi|349580763|dbj|GAA25922.1| K7_Rps3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763526|gb|EHN05054.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296815|gb|EIW07916.1| Rps3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 240
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|401839576|gb|EJT42741.1| RPS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|365758790|gb|EHN00617.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 240
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|363754787|ref|XP_003647609.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891246|gb|AET40792.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 328
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/179 (73%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 85 MVTVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 144
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESL++KLL GLA+RRA Y
Sbjct: 145 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLKFKLLNGLAIRRAAY 204
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPVN++ID+A RHVLLRQ
Sbjct: 205 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQ 263
>gi|17554770|ref|NP_498349.1| Protein RPS-3 [Caenorhabditis elegans]
gi|1350989|sp|P48152.1|RS3_CAEEL RecName: Full=40S ribosomal protein S3
gi|351050702|emb|CCD65297.1| Protein RPS-3 [Caenorhabditis elegans]
Length = 247
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 151/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQ
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQ 181
>gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax Sal-1]
gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H]
gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax]
gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H]
gi|389585194|dbj|GAB67925.1| 40S ribosomal protein S3 [Plasmodium cynomolgi strain B]
Length = 222
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/195 (72%), Positives = 163/195 (83%), Gaps = 1/195 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 VSLIFVMLISVPVIV 194
L + I +P V
Sbjct: 181 GVLGIKVKIMLPTAV 195
>gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 234
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/179 (73%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVAFISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFKF ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKFKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae]
Length = 247
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 151/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQ
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQ 181
>gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
Length = 221
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/198 (71%), Positives = 164/198 (82%), Gaps = 1/198 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 VSLIFVMLISVPVIVLER 197
L + I +P + R
Sbjct: 181 GVLGIKVKIMLPTAIDTR 198
>gi|341895059|gb|EGT50994.1| CBN-RPS-3 protein [Caenorhabditis brenneri]
Length = 246
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 151/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQ
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQ 181
>gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica]
gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica]
gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica]
gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 155/178 (87%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRK VA+GVF AEL+ L +ELAEDGYSGVEVR+TP RTEIII ATRTQNVLG+
Sbjct: 5 SANISKKRKHVAEGVFRAELDGYLRKELAEDGYSGVEVRITPKRTEIIILATRTQNVLGD 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
K +RIRELT++VQKRF+ + +VEL+AEKV NRGLCAIAQ ESLRYKL GGLAVRRA YG
Sbjct: 65 KAKRIRELTALVQKRFQIKDGAVELFAEKVANRGLCAIAQCESLRYKLEGGLAVRRAAYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRFIMESGAKGCEV++SGKLR QRAK+MKF DG MI +G PV EY+D+AVRHV+LRQ
Sbjct: 125 VLRFIMESGAKGCEVVISGKLRGQRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQ 182
>gi|302306412|ref|NP_982809.2| 40S ribosomal protein S3 [Ashbya gossypii ATCC 10895]
gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895]
gi|374106011|gb|AEY94921.1| FABL138Wp [Ashbya gossypii FDAG1]
Length = 244
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/179 (73%), Positives = 155/179 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESLR+KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLRFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPVN++ID+A RHVLLRQ
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQ 179
>gi|255711614|ref|XP_002552090.1| 40S ribosomal protein S3 [Lachancea thermotolerans]
gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans CBS 6340]
Length = 248
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ S+ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYQAGSIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPV ++ID+A RHVLLRQ
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLLRQ 179
>gi|444317298|ref|XP_004179306.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
gi|387512346|emb|CCH59787.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
Length = 248
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 155/175 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLGE GR
Sbjct: 13 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLGENGR 72
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELT +VQKRFK+ SV LYAE++ +RGL A+AQAES+++KLL GLA+RRA YGV+R
Sbjct: 73 RINELTLLVQKRFKYKAGSVVLYAERIQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 132
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 133 YVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 187
>gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis angaria]
Length = 247
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/175 (77%), Positives = 152/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V +G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 LTKKKKAVQNGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVEL+AEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELFAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQ
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQ 181
>gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 192
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 156/175 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GR
Sbjct: 4 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R
Sbjct: 64 RINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 124 YVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 178
>gi|50291535|ref|XP_448200.1| 40S ribosomal protein S3 [Candida glabrata CBS 138]
gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata]
Length = 247
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M + ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVSLISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri]
Length = 205
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/188 (73%), Positives = 156/188 (82%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+G
Sbjct: 6 NVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLI 183
RFIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQ +
Sbjct: 126 RFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIG 185
Query: 184 FVMLISVP 191
+ I +P
Sbjct: 186 IKVKIMLP 193
>gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03]
Length = 261
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/175 (78%), Positives = 150/175 (85%), Gaps = 9/175 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II LGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDII---------LGEQGR 58
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 59 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQ
Sbjct: 119 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 173
>gi|365988130|ref|XP_003670896.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
gi|343769667|emb|CCD25653.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
Length = 243
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYTPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPV ++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVKDFIDTATRHVLMRQ 179
>gi|367007661|ref|XP_003688560.1| 40S ribosomal protein S3 [Tetrapisispora phaffii CBS 4417]
gi|357526869|emb|CCE66126.1| hypothetical protein TPHA_0O01590 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 155/179 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLG
Sbjct: 1 MVAYISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFKF +V LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKFKAGTVVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV++SGKLRA RAK+MK+ DG++I SGQPVN++ID A RHVL+RQ
Sbjct: 121 GVIRYVMESGAKGCEVVISGKLRAARAKAMKYADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA]
gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei]
Length = 218
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/192 (73%), Positives = 163/192 (84%), Gaps = 3/192 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KGR
Sbjct: 1 ISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGR 60
Query: 65 RIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTS+VQKRF F + NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 61 RIRELTSLVQKRF-FNKLTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 119
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+Q L
Sbjct: 120 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVL 179
Query: 183 IFVMLISVPVIV 194
+ I +P +
Sbjct: 180 GIKVKIMLPTAI 191
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 188
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/174 (73%), Positives = 155/174 (89%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GRR
Sbjct: 1 SKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 60
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
I ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R+
Sbjct: 61 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 120
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 VMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 174
>gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae]
Length = 240
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/179 (72%), Positives = 156/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGV +AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVNYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 172
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/166 (80%), Positives = 146/166 (87%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVR TP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRATPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDS 170
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVET 172
>gi|403216300|emb|CCK70797.1| hypothetical protein KNAG_0F01290 [Kazachstania naganishii CBS
8797]
Length = 249
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/179 (72%), Positives = 154/179 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLFAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|254580157|ref|XP_002496064.1| 40S ribosomal protein S3 [Zygosaccharomyces rouxii]
gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
Length = 246
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 154/179 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSG EVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGTEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 EGGRRINELTLLVQKRFKYKPGTIVLYAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQPV ++ID+A RHVL+RQ
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLMRQ 179
>gi|50553820|ref|XP_504321.1| 40S ribosomal protein S3 [Yarrowia lipolytica]
gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica CLIB122]
Length = 246
Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 152/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVR+TP +TEI++RAT T VLGE GR
Sbjct: 7 ISKKRKIVADGVFYAELNEFFTRELAEEGYSGVEVRLTPTKTEIVVRATHTNKVLGENGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIREL S+VQKRF+ PE SV +YAE+V RGL A+AQ ES++YKLL GLA+RRA YGV+R
Sbjct: 67 RIRELMSLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRRAAYGVVR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
++M++GAKG EV+VSGKLRA RAKSMKF DG+MI SGQPVN++ID+A RHVLLRQ
Sbjct: 127 YVMDAGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPVNDFIDTATRHVLLRQ 181
>gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri]
Length = 220
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/170 (78%), Positives = 148/170 (87%)
Query: 22 NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPE 81
+E LTRELAEDGYSGVE+R TP RTEIII ATRTQNVLG+KGRRIRELTSVVQKRFKF +
Sbjct: 1 DEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFKFAD 60
Query: 82 NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGK 141
++ELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGK
Sbjct: 61 GAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 120
Query: 142 LRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
LR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQ L + I +P
Sbjct: 121 LRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 170
>gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus]
Length = 272
Score = 275 bits (702), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/187 (74%), Positives = 153/187 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
I+KK+K V DGVF AELN L +ELAEDGY+GVEVR P RTE+II ATRTQNVLGE+GR
Sbjct: 27 ITKKKKAVQDGVFKAELNNFLMKELAEDGYAGVEVRRAPTRTEVIITATRTQNVLGERGR 86
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF F VELYAEKV NRGLCA+AQ ESLR+KL GGLAVRRACYGVLR
Sbjct: 87 RIRELTAVVQKRFGFNVGQVELYAEKVANRGLCAVAQCESLRFKLCGGLAVRRACYGVLR 146
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
FIMES AKGCE+IVSGKLR QRAK+MKF DG MI SG PVNEY+ AVRHV LRQ L
Sbjct: 147 FIMESQAKGCEIIVSGKLRGQRAKAMKFVDGIMIHSGHPVNEYVQQAVRHVQLRQGVLGI 206
Query: 185 VMLISVP 191
+ I +P
Sbjct: 207 KVKIMLP 213
>gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius]
Length = 221
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 150/177 (84%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
GV AELNE LTRELAE+GYSG+E+R+TP RTEIII AT TQNVLGEKG+RIR LTSV+Q
Sbjct: 1 GVLKAELNEFLTRELAEEGYSGIEMRMTPARTEIIIMATSTQNVLGEKGKRIRALTSVIQ 60
Query: 75 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
KRF+F E ++LY EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIME+GAKGC
Sbjct: 61 KRFQFAEGKLDLYTEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMENGAKGC 120
Query: 135 EVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
E++VSGKLR QRAKSMKF DG MI SG P NEY+DSA RHVLLRQ L + I +P
Sbjct: 121 EIVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDSATRHVLLRQGVLGVKVKIMLP 177
>gi|50306913|ref|XP_453432.1| 40S ribosomal protein S3 [Kluyveromyces lactis NRRL Y-1140]
gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis]
Length = 237
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/179 (70%), Positives = 157/179 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRAT+ Q+V+G
Sbjct: 1 MVAIISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATKVQDVVG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +++KRFK+ ++ LYAE+V++RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLIEKRFKYKRGTIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPVN++I++A RHVLLRQ
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVNDFIETATRHVLLRQ 179
>gi|339240791|ref|XP_003376321.1| 40S ribosomal protein S3-A [Trichinella spiralis]
gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis]
Length = 330
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 147/174 (84%), Gaps = 2/174 (1%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
S K+KF+ADGVF AELN RELAEDGYSGVEVR TP +TEIII ATRTQNVLGEKGRR
Sbjct: 100 SIKKKFIADGVFKAELNNFFMRELAEDGYSGVEVRKTPRKTEIIIMATRTQNVLGEKGRR 159
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF PE S LYAEKV RGLCAIAQ ESLR+KL+GGL VRRACYG+LR+
Sbjct: 160 IRELTSLVQKRFNLPEES--LYAEKVAQRGLCAIAQCESLRFKLIGGLPVRRACYGILRY 217
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
IMES AKGCEVIVSGKLR QRAKSMKF DG MI SG P NEY++ VRHV+LRQ
Sbjct: 218 IMESQAKGCEVIVSGKLRGQRAKSMKFVDGLMIHSGDPTNEYVEKGVRHVVLRQ 271
>gi|406603719|emb|CCH44744.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 246
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/179 (72%), Positives = 154/179 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE GY+GVEVRVTP RTE+IIRAT+T VLG
Sbjct: 1 MVNIISKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRVTPTRTEVIIRATQTNAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELTS+VQKRFKF ++ LYAE+V +RGL A+AQAESL++KLL GLA+RRA Y
Sbjct: 61 ENGRRIYELTSLVQKRFKFAPGTIVLYAERVQDRGLSAVAQAESLKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKG EV++SGKLRA RAK+MKF+DG++I SGQPV ++ID+A RHVLLRQ
Sbjct: 121 GVVRYVMESGAKGVEVVISGKLRAARAKAMKFQDGFLIHSGQPVKDFIDTATRHVLLRQ 179
>gi|254564691|ref|XP_002489456.1| 40S ribosomal protein S3 [Komagataella pastoris GS115]
gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Komagataella pastoris CBS 7435]
Length = 243
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 150/175 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAEDGYSGVEVRVTP TEIIIRAT+T +VLGE GR
Sbjct: 6 ISKKRKLVADGVFYAELNEYFTRELAEDGYSGVEVRVTPTTTEIIIRATQTNSVLGENGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRFK E V LYAE+V +RGL A+ Q ESLRYKLL GLA+RRA YGV+R
Sbjct: 66 RIRELTALVQKRFKIDEGKVILYAERVQDRGLSAVTQCESLRYKLLNGLAIRRAAYGVVR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F+M+SGAKG EV+VSGKLRA RAKSMKF DG+MI SGQP ++I++A RHVLLRQ
Sbjct: 126 FVMDSGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPAKDFIETATRHVLLRQ 180
>gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei]
gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei]
Length = 255
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 151/183 (82%), Gaps = 8/183 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVE--------LYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
RI+ELTSVVQKRF F E SVE LYAEKV+NRGLCA+AQ ESLRYKL+GGLAVR
Sbjct: 67 RIKELTSVVQKRFAFEEGSVEVKFSFRNLLYAEKVSNRGLCAVAQCESLRYKLVGGLAVR 126
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV
Sbjct: 127 RACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQ 186
Query: 177 LRQ 179
LRQ
Sbjct: 187 LRQ 189
>gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo]
gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis]
Length = 223
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 153/177 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T+ S RKF+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATR + V+GEK
Sbjct: 5 TRKSMCRKFIGDGVFNAELNEFLSRVLAEDGYSGVELRITPVRTEIIIRATRAREVVGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRIRELTS++QKRF F ++VELYAE+V ++GLCA+AQAESLRYKLL GLAVRRA YGV
Sbjct: 65 ARRIRELTSLIQKRFGFSPDTVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LR IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP ++ SA R V LRQ
Sbjct: 125 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQ 181
>gi|428179210|gb|EKX48082.1| small subunit ribosomal protein S3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 249
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/187 (70%), Positives = 158/187 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGV +AELNE+L ELAEDGYSGVE+R TP+RTEIIIRATRT+ VLGEKG+
Sbjct: 6 ISKKRKFVQDGVLYAELNEMLMHELAEDGYSGVEIRRTPMRTEIIIRATRTREVLGEKGQ 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS VQKRF F E +VE++AE+V+NRGL A+AQAESL++KLLGGL VRRACYGV+R
Sbjct: 66 RIRELTSAVQKRFGFAEGTVEMFAERVHNRGLSAMAQAESLKFKLLGGLQVRRACYGVIR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
F+MESGA G EVIVSGK R QRAKSMKFK G++I++G+P +ID A RHV+++Q L
Sbjct: 126 FVMESGALGVEVIVSGKARVQRAKSMKFKSGFLITTGRPAQVFIDKATRHVMMKQGVLGI 185
Query: 185 VMLISVP 191
+ I +P
Sbjct: 186 RLKIMLP 192
>gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii]
Length = 188
Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/163 (82%), Positives = 143/163 (87%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELTSVVQKRF F E +VELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFQEGTVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAK
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAK 120
Query: 149 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
SMKF DG MI SG P N+Y+D+AVRHVLLRQ L + I +P
Sbjct: 121 SMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKVKIMLP 163
>gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba]
gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba]
Length = 156
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/151 (90%), Positives = 141/151 (93%), Gaps = 3/151 (1%)
Query: 44 VRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAE 103
+RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAE
Sbjct: 1 MRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAE 60
Query: 104 SLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
SLRYKLLGGLAVRRACYGVLRF+M+SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 61 SLRYKLLGGLAVRRACYGVLRFVMDSGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 120
Query: 164 VNEYIDSAVRHVLLRQVSL---IFVMLISVP 191
VNEYIDSAVRHVLLRQ L + +ML P
Sbjct: 121 VNEYIDSAVRHVLLRQGVLGIKVKIMLDWDP 151
>gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
Length = 264
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 151/175 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVF AELNE TRELA +GYSG VRV VRTEIIIRAT TQ VLG+KGR
Sbjct: 6 ISKKRKFVADGVFTAELNEFFTRELAAEGYSGCLVRVNHVRTEIIIRATHTQEVLGDKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
R+RELT++V++RF+FPE S+ELYAEKV NRGL A+AQ ESLR KLLGGL VRRA YGVLR
Sbjct: 66 RLRELTTLVRQRFRFPEGSLELYAEKVANRGLHAVAQCESLRNKLLGGLPVRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
++MESGAKGCEV++SGK+R RAKSMKF DG+MI +GQP +++D A+RHVL++Q
Sbjct: 126 YVMESGAKGCEVVISGKVRGARAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQ 180
>gi|406867161|gb|EKD20200.1| ribosomal protein S3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 319
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/175 (76%), Positives = 143/175 (81%), Gaps = 13/175 (7%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVFFAELNE RELAE+GY IIRAT TQ VLGE+GR
Sbjct: 82 ISKRRKFVADGVFFAELNEFFQRELAEEGY-------------FIIRATHTQEVLGEQGR 128
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 129 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 188
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQ
Sbjct: 189 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQ 243
>gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea]
Length = 156
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/156 (86%), Positives = 141/156 (90%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
ATQ+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVT RTEIII AT+TQNVLGE
Sbjct: 1 ATQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTQTRTEIIILATKTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
VL+FIMES AKGCEV+VSGKLR QRAKSM F DG M
Sbjct: 121 VLKFIMESQAKGCEVVVSGKLRGQRAKSMTFVDGLM 156
>gi|391337612|ref|XP_003743161.1| PREDICTED: 40S ribosomal protein S3-like [Metaseiulus occidentalis]
Length = 239
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 151/179 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKR+FVADGVF AELNE L RELAE+GYSGVEVR +T+III ATRTQ+VLG
Sbjct: 1 MPGQISKKRRFVADGVFNAELNEFLRRELAENGYSGVEVRNGATKTDIIIMATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGR+IRELT+VVQKRF F E +V L+AEKV+ RGLCAI Q ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRKIRELTAVVQKRFGFKEGTVNLFAEKVSARGLCAITQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLR IME+ A GCEV+VSGKLR QRAKSMKF +G MI SG P N Y+++AVRHVLL+Q
Sbjct: 121 SVLRCIMEAEAMGCEVVVSGKLRGQRAKSMKFVEGLMIHSGDPTNHYVETAVRHVLLKQ 179
>gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus]
Length = 147
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/147 (91%), Positives = 138/147 (93%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 1 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 61 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMK 151
FIMESGAKGCEV+VSGKLR QRAKSMK
Sbjct: 121 FIMESGAKGCEVVVSGKLRGQRAKSMK 147
>gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
Length = 239
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 150/178 (84%), Gaps = 11/178 (6%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRF+MESGAKGCEV++SGKLRA RAKSMKF D +++D AVRHVL++Q
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTD-----------DFVDEAVRHVLMKQ 169
>gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus]
Length = 177
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/147 (91%), Positives = 137/147 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRA 147
GVLRFIMESGAKGCEV+VSGKLR QRA
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRA 147
>gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus]
Length = 145
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/145 (91%), Positives = 136/145 (93%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRI
Sbjct: 1 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 60
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI
Sbjct: 61 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 120
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMK 151
MESGAKGCEV+VSGKLR QRAKSMK
Sbjct: 121 MESGAKGCEVVVSGKLRGQRAKSMK 145
>gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus]
Length = 168
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/145 (91%), Positives = 135/145 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQ 145
GVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQ 145
>gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Ogataea parapolymorpha DL-1]
Length = 235
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 147/179 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M SKKRK VADGVF+AELNE TREL E+GY+GVEVR+TP +TE+II AT TQ VLG
Sbjct: 1 MVANFSKKRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTEVIISATNTQRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELTS++QKRFKF ++ L+AE+V +RGL A+ Q ESL+YKLL GLAVRRA Y
Sbjct: 61 EKGRRINELTSLIQKRFKFAPGTIVLFAERVQDRGLSAVTQCESLKYKLLNGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R +MESGAKG EV++SGK + RAKSMKF DG+MI SGQPVN++ID A RHVLLRQ
Sbjct: 121 GVIRHVMESGAKGVEVVISGKSKGARAKSMKFGDGFMIHSGQPVNDFIDVATRHVLLRQ 179
>gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 221
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/162 (80%), Positives = 139/162 (85%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAE 89
AEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAE
Sbjct: 1 AEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAE 60
Query: 90 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKS 149
KV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q AKS
Sbjct: 61 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQCAKS 120
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
MKF DG MI SG P NEY+D+A RHVLLRQ L + I +P
Sbjct: 121 MKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLP 162
>gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi]
gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 154/192 (80%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
I+KK+ FV G+ +AELNE L RELAEDGYSGVEVR T RTEIIIRATR Q V+G+
Sbjct: 5 ANINKKKHFVHQGLLYAELNEFLKRELAEDGYSGVEVRATVARTEIIIRATRPQTVVGDN 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRR++ELTSV+QKRF F E +ELYAE V N+GL AIAQAESL+ KL+ G+AVR+ACYGV
Sbjct: 65 GRRMKELTSVIQKRFGFEEGKIELYAENVKNKGLSAIAQAESLKQKLMEGVAVRKACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LRF+M+SGAKG VIVSGKLRAQRAKSMKF +GYMI +GQPV +Y+D AVRHV ++Q L
Sbjct: 125 LRFVMDSGAKGGAVIVSGKLRAQRAKSMKFAEGYMIRTGQPVKDYVDIAVRHVYMKQGVL 184
Query: 183 IFVMLISVPVIV 194
+ + +P +V
Sbjct: 185 GIKVKVMLPWVV 196
>gi|413917291|gb|AFW57223.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 196
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 134/138 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIV 138
GVLR++MESGAKGCEV V
Sbjct: 121 GVLRYVMESGAKGCEVSV 138
>gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 219
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/189 (67%), Positives = 151/189 (79%), Gaps = 1/189 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ P TEI IRA++TQ ++GE
Sbjct: 7 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKQGPASTEITIRASKTQAIVGEN 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RR+ EL S+VQKRF F E +V ++AEKV NRGLCA+AQAESL+ KLL GL VRRACY +
Sbjct: 67 ARRVHELCSLVQKRFGFKEGAVTIFAEKVQNRGLCAVAQAESLKIKLLAGLPVRRACYAI 126
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
L +M GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP +++D AVRHVLLRQ +L
Sbjct: 127 LHQVMTKGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSQQFVDFAVRHVLLRQGTL 186
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 187 GVKVAIMLP 195
>gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus]
Length = 147
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/143 (90%), Positives = 134/143 (93%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 5 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 125 FIMESGAKGCEVIVSGKLRAQRA 147
FIMESGAKGCEV+VSGKLR QRA
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRA 147
>gi|223942381|gb|ACN25274.1| unknown [Zea mays]
gi|413921203|gb|AFW61135.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 148
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/136 (93%), Positives = 133/136 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEV 136
GVLRF+MESGAKGCEV
Sbjct: 121 GVLRFVMESGAKGCEV 136
>gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 165
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/158 (81%), Positives = 136/158 (86%)
Query: 34 YSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNN 93
YSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV
Sbjct: 1 YSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVAT 60
Query: 94 RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFK 153
RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF
Sbjct: 61 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFV 120
Query: 154 DGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
DG MI SG P NEY+D+A RHVLLRQ L + I +P
Sbjct: 121 DGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLP 158
>gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
gi|74834663|sp|P90526.1|RS3_DICDI RecName: Full=40S ribosomal protein S3
gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum]
gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
Length = 218
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 152/189 (80%), Gaps = 1/189 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 6 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPN 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY +
Sbjct: 66 ARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAI 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
+ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP ++ID A RHVLLRQ +L
Sbjct: 126 VHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTL 185
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 186 GVKVAIMLP 194
>gi|154284746|ref|XP_001543168.1| 40S ribosomal protein S3 [Ajellomyces capsulatus NAm1]
gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
Length = 239
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/148 (84%), Positives = 134/148 (90%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKF 152
FIMESGAKGCEV+VSGKLRA RAKSMKF
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKF 155
>gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus]
Length = 176
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/157 (81%), Positives = 135/157 (85%)
Query: 35 SGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNR 94
SGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FP+ +VELYAEKV R
Sbjct: 1 SGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFSFPDGTVELYAEKVAAR 60
Query: 95 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 154
GLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR QRAKSMKF D
Sbjct: 61 GLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRGQRAKSMKFVD 120
Query: 155 GYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
G+MI SG P EYIDSAV HV LRQ L + I +P
Sbjct: 121 GFMIHSGYPTREYIDSAVTHVHLRQGVLGIKVKIMLP 157
>gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
Length = 218
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 151/189 (79%), Gaps = 1/189 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
Q+SKKRKFV DGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 6 QMSKKRKFVLDGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPN 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY +
Sbjct: 66 ARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAI 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
+ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP +++D A RHVLLRQ +L
Sbjct: 126 VHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFVDFACRHVLLRQGTL 185
Query: 183 IFVMLISVP 191
+ I +P
Sbjct: 186 GVKVAIMLP 194
>gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis]
Length = 190
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 141/164 (85%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
ELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKGRRIRELT+ +QKRF F ++ VEL+
Sbjct: 1 ELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKDEVELF 60
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRA 147
AEKV NRGLCA+AQ E+LRYKL GGLAVRRACYGV+RF+MESGAKGCEVIVSGKLRAQRA
Sbjct: 61 AEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGCEVIVSGKLRAQRA 120
Query: 148 KSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
K+MKF DG+MISSG P EYID+AVRHV +RQ + + I +P
Sbjct: 121 KAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKVKIMLP 164
>gi|385302955|gb|EIF47058.1| 40s ribosomal protein s3 [Dekkera bruxellensis AWRI1499]
Length = 261
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A+ ISK RK VADGVF+AELNE TREL E+GY+GVEVR+TP +T++IIRA++T VLG
Sbjct: 2 VASHISKTRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTDVIIRASQTAMVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT ++QKRF F S+ LYAE+V ++GL A Q ESLR+KLL GLAVRRA Y
Sbjct: 62 EKGRRIRELTMLLQKRFHFAPGSIVLYAERVRDKGLSAATQCESLRFKLLNGLAVRRAAY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+RF ME+GAKG EVI++GK + RAK+MKF DG+MI +GQP ++ID A RHVL+RQ
Sbjct: 122 GVIRFAMEAGAKGVEVIIAGKAKGARAKAMKFADGFMIHTGQPAKDFIDVACRHVLMRQ 180
>gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum]
Length = 163
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/157 (80%), Positives = 134/157 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK KFV DG+F A+ E LTRELAEDGYSGVEVR+T RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKWKFVVDGIFKAQWYEFLTRELAEDGYSGVEVRLTLTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+ IRELT+VVQKRF FPE+SVELYAEKV R LCAI QAESL +KLLGGLAVRR CY
Sbjct: 61 EKGQSIRELTAVVQKRFGFPESSVELYAEKVATRSLCAIGQAESLHHKLLGGLAVRRTCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
GVL+FIMESGAKG EV VSGKLR QRAKSM F DG M
Sbjct: 121 GVLQFIMESGAKGGEVGVSGKLRGQRAKSMMFVDGLM 157
>gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 242
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR T +TE+I++A+ TQ VLGE+GR
Sbjct: 9 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTNTKTEVIVKASNTQGVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK P++ + +YAE+V R L A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 69 RIHELTSLIVKRFKLPQDGIVIYAERVEERALSAAVQAEALKAKLLSGLPIRRAAYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP E+ID+A+RHVL+RQ
Sbjct: 129 FTMAAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTREFIDTAIRHVLMRQ 183
>gi|358336359|dbj|GAA54888.1| small subunit ribosomal protein S3e [Clonorchis sinensis]
Length = 230
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 144/176 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++S KRKF+ GVF AEL+E L RELAEDGYSGV+VR + TE+II AT+TQ+VLGE
Sbjct: 6 KMSLKRKFIKAGVFKAELDEFLKRELAEDGYSGVQVRESRKYTEVIILATKTQSVLGEGC 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV++KRF F E ++EL AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLEKRFGFAEGTLELCAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAKSMKF DG MI SG PVN YID AVRHVLL Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKSMKFSDGLMIHSGDPVNYYIDKAVRHVLLPQ 181
>gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii]
gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii]
Length = 246
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 148/179 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ++SK++KF+ DGVFF+ELNE+L+REL+++GY+ VE+R P++TEII++ T+T ++LG
Sbjct: 30 MNKKLSKQKKFINDGVFFSELNELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILG 89
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+GRRI+E+ +++KRF+F E S+E+Y EK+ N+ LCAI+QAESLRYKLL G+ +RRACY
Sbjct: 90 SRGRRIKEINGLIKKRFQFDEKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACY 149
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
L+ MESGAKGC + VSGKLRAQRAK+MKF DGY+I SG+PV +YI+ A RH LRQ
Sbjct: 150 STLKSTMESGAKGCIISVSGKLRAQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQ 208
>gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3
in Mus musculus [Schistosoma japonicum]
Length = 226
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 143/176 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum]
Length = 230
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 143/176 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|448526764|ref|XP_003869393.1| Rps3 ribosomal protein S3 [Candida orthopsilosis Co 90-125]
gi|380353746|emb|CCG23258.1| Rps3 ribosomal protein S3 [Candida orthopsilosis]
Length = 247
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 141/177 (79%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGV
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRF M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQ
Sbjct: 125 LRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 181
>gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 143/176 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 143/176 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTLRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
Length = 238
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 140/175 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE++ RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIVIYAERIEERGLSAAVQAEALKSKLLNGLPMRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQ
Sbjct: 126 FAMAAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTNDFIDIAIRHVLMRQ 180
>gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 247
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 140/175 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 180
>gi|90076128|dbj|BAE87744.1| unnamed protein product [Macaca fascicularis]
gi|90076700|dbj|BAE88030.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/133 (91%), Positives = 124/133 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKG 133
GVLRFIMESGAKG
Sbjct: 121 GVLRFIMESGAKG 133
>gi|354546036|emb|CCE42765.1| hypothetical protein CPAR2_204080 [Candida parapsilosis]
Length = 247
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 141/177 (79%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGV
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKTKLLNGLPIRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
LRF M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQ
Sbjct: 125 LRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 181
>gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 142/176 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPNGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 143/176 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESL+YKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLKYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica]
Length = 165
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 131/157 (83%)
Query: 35 SGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNR 94
GVEVRVTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV R
Sbjct: 2 PGVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFSFEPGRIELYAEKVATR 61
Query: 95 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 154
GLCAIAQAESLRYKL GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF D
Sbjct: 62 GLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVD 121
Query: 155 GYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
G MI SG P N+Y+++A RHVLLRQ L + I +P
Sbjct: 122 GLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKIMLP 158
>gi|344303916|gb|EGW34165.1| hypothetical protein SPAPADRAFT_49231 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 139/175 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQAVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK V +YAE++ R L A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLITKRFKLSPEGVAIYAERIEERALSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 180
>gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 143/176 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG +I SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLLIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 142/176 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAE LRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAEPLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|448103770|ref|XP_004200121.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359381543|emb|CCE82002.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 140/175 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + V +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLICKRFKISQEGVVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPARDFIDLAIRHVLMRQ 180
>gi|126132980|ref|XP_001383015.1| 40S ribosomal protein S3 [Scheffersomyces stipitis CBS 6054]
gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 138/175 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLLVKRFKLSPEGIVIYAERVEERGLSAAVQAEGLKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTKDFIDIAIRHVLMRQ 180
>gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 230
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 142/176 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN YID AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQ 181
>gi|50427849|ref|XP_462537.1| 40S ribosomal protein S3 [Debaryomyces hansenii CBS767]
gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii CBS767]
Length = 239
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 140/175 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKSKLLNGLPLRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTKDFIDIAIRHVLMRQ 180
>gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans]
Length = 225
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 142/176 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 1 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 60
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 61 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 120
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN YID AVRHV L Q
Sbjct: 121 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQ 176
>gi|241958636|ref|XP_002422037.1| 40S ribosomal protein S3 [Candida dubliniensis CD36]
gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 254
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 139/175 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQ 180
>gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1]
Length = 251
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 139/175 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQ 180
>gi|448100073|ref|XP_004199265.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359380687|emb|CCE82928.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 140/175 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 KIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPAKDFIDLAIRHVLMRQ 180
>gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
Length = 248
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 138/175 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEGLKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQ 180
>gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 142/176 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RFIMESGA+G EVIVSGK++ QRAK+MKF G MI SG PVN Y+D AVRHV L Q
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCYGLMIHSGDPVNYYVDKAVRHVQLPQ 181
>gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis]
Length = 229
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 3/194 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ + RKF+ G+F AEL+E+L RELAEDGYSG+ VR T +TE+II AT+TQNVLG
Sbjct: 1 MATKETTTRKFIKAGLFKAELDEMLKRELAEDGYSGIMVRGTHPKTEVIISATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
++ +RIRELTS+++KRF F + ++ LYA+KV RG+ A+AQAESL+Y+L GG+ VR+ACY
Sbjct: 61 DESKRIRELTSLIEKRFAFEQGTLSLYADKVAVRGISAVAQAESLKYRLTGGMPVRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
VL+ IMES AKG EVIVSGK++ QRAK+MKF DG MI SG PVN YI AVRHVLL Q
Sbjct: 121 AVLKQIMESEAKGGEVIVSGKIKGQRAKAMKFTDGLMIHSGDPVNYYIAKAVRHVLLPQG 180
Query: 181 SL---IFVMLISVP 191
L + +ML P
Sbjct: 181 ILGIKVKIMLDHDP 194
>gi|343887316|dbj|BAK61862.1| 40S ribosomal protein S3 [Citrus unshiu]
Length = 184
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/126 (92%), Positives = 118/126 (93%), Gaps = 1/126 (0%)
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 3 GEKGRRIRELTSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 62
Query: 120 YGVLRF-IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GVLRF I+ESGAKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVLLR
Sbjct: 63 CGVLRFIILESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLLR 122
Query: 179 QVSLIF 184
Q S IF
Sbjct: 123 QASSIF 128
>gi|342184715|emb|CCC94197.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 147/192 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTP+RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A+RH LR ++
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGV 183
Query: 185 VMLISVPVIVLE 196
+ I P +LE
Sbjct: 184 KVKIMRPTSMLE 195
>gi|342183330|emb|CCC92810.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 147/192 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTP+RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A+RH LR ++
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGV 183
Query: 185 VMLISVPVIVLE 196
+ I P +LE
Sbjct: 184 KVKIMRPTSMLE 195
>gi|426369809|ref|XP_004051876.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Gorilla gorilla
gorilla]
Length = 206
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/138 (83%), Positives = 121/138 (87%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 17 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 76
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
AVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVR
Sbjct: 77 AVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 136
Query: 174 HVLLRQVSLIFVMLISVP 191
HVLLRQ L + I +P
Sbjct: 137 HVLLRQGVLGIKVKIMLP 154
>gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802224|pdb|3ZEY|X Chain X, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 147/192 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A RH LR ++
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 183
Query: 185 VMLISVPVIVLE 196
+ I P ++E
Sbjct: 184 NVKIMRPQSMIE 195
>gi|344231772|gb|EGV63654.1| ribosomal protein S3 [Candida tenuis ATCC 10573]
gi|344231773|gb|EGV63655.1| hypothetical protein CANTEDRAFT_114699 [Candida tenuis ATCC 10573]
Length = 237
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 136/175 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ Q VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEHGYAGVEVRRTPTKLEIIVKASNPQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I ELTS++ KRFK + V +YAE+V RGL A QAE L+ KLL GL RRA YGVLR
Sbjct: 66 KIHELTSLICKRFKLAKEGVVIYAERVEIRGLSAAVQAEGLKAKLLSGLPFRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F M +GAKG EV++SGKLR RAK+ K+ DG+MI SGQP ++ID A+RHVL+RQ
Sbjct: 126 FAMNNGAKGVEVVISGKLRGARAKAQKYADGFMIHSGQPTKDFIDIAIRHVLMRQ 180
>gi|444731980|gb|ELW72307.1| Calcium-binding protein 39-like protein [Tupaia chinensis]
Length = 518
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 139/180 (77%), Gaps = 4/180 (2%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
+ K+KF ADG+F AELNE TRELAED SG+EVRVTP RTEII+ ATRTQNVLGEKG R
Sbjct: 109 TSKKKFDADGIFKAELNEFRTRELAEDRCSGLEVRVTPTRTEIIVLATRTQNVLGEKGPR 168
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR----ACYG 121
I+E T+V+ KR FPE SVELYAEKV RGLCAIAQAESLRY+LL GLA RR AC
Sbjct: 169 IQESTAVIPKRSGFPEGSVELYAEKVATRGLCAIAQAESLRYRLLEGLAGRRPATCACCA 228
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VL F +SGA GCE +VS K R QRAK+++F DG +I SG VN Y+D+ VRHVLLR+ +
Sbjct: 229 VLWFFTDSGATGCEAVVSQKRRGQRAKALRFVDGLVIDSGDRVNYYVDTNVRHVLLRRCA 288
>gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 266
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 139/174 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A RH LR
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLR 229
>gi|340056073|emb|CCC50402.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
gi|340057730|emb|CCC52077.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
Length = 214
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 145/192 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKR V DG+F+AEL E L RELA+DG++GVE RVTP RTEI+IRAT+T+ VLGEK R
Sbjct: 4 ISKKRMMVRDGIFYAELFEFLKRELADDGFAGVEHRVTPQRTEIVIRATKTREVLGEKNR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E V+LYAE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKVQLYAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++ +A RH LR ++
Sbjct: 124 LVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVSTATRHCHLRAGTIGV 183
Query: 185 VMLISVPVIVLE 196
+ I +P ++E
Sbjct: 184 KVKIMLPNSMVE 195
>gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis]
gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
M++Q ISKK + VADGVF+AEL+E+L REL+E GYSGV +R + ++TEIIIRA R Q ++
Sbjct: 1 MSSQRISKKHQCVADGVFYAELDELLNRELSEVGYSGVSIRKSTMKTEIIIRAPRPQEII 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRRA
Sbjct: 61 GENSRRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAA 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
Y V+R +E+GAKGCEVIVSGKLR QRA +MKFK+GYMI +G E++D A RHVL++Q
Sbjct: 121 YAVIRSALEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGNACKEFVDEATRHVLVKQ 180
>gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 266
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 139/174 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A RH LR
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLR 229
>gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/125 (93%), Positives = 119/125 (95%), Gaps = 2/125 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR Y
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR--Y 118
Query: 121 GVLRF 125
V F
Sbjct: 119 HVFEF 123
>gi|198456485|ref|XP_002136327.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
gi|198142674|gb|EDY71398.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/151 (75%), Positives = 126/151 (83%)
Query: 41 VTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA 100
VTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RGLCAIA
Sbjct: 1 VTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIA 60
Query: 101 QAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS 160
QAESLRYKL GGLAVRRACYGVLRFI+ESGAKGCEV+VSGKLR QRAKSMKF DG MI S
Sbjct: 61 QAESLRYKLTGGLAVRRACYGVLRFIIESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS 120
Query: 161 GQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
G P N+Y+++A RHVLLRQ L + I +P
Sbjct: 121 GDPCNDYVETATRHVLLRQGVLGIKVKIMLP 151
>gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis]
Length = 166
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/144 (79%), Positives = 124/144 (86%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
III ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRY
Sbjct: 1 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 60
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEY 167
KL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y
Sbjct: 61 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDY 120
Query: 168 IDSAVRHVLLRQVSLIFVMLISVP 191
+++A RHVLLRQ L + I +P
Sbjct: 121 VNTATRHVLLRQGVLGIKVKIMLP 144
>gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 250
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 139/178 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 21 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 80
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 81 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 140
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
V+R IMESGAKGCEV +SGKLR QRA+ M FK+GYMI SG ++ SAVR VLLR
Sbjct: 141 SVMRLIMESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLR 198
>gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 140/176 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++SKKR+ VADGVF+AEL+E+L RELAE GYSGV +R + ++TEIIIRA R Q ++GE
Sbjct: 5 RVSKKRQCVADGVFYAELDELLNRELAEVGYSGVSIRKSTMKTEIIIRAPRPQEIIGENS 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRRA V+
Sbjct: 65 RRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAATAVI 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
R +E+GAKGCEVIVSGKLR QRA +MKFK+GYMI +G E++D A RHVL++Q
Sbjct: 125 RSALEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGYACKEFVDEATRHVLVKQ 180
>gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus]
Length = 135
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/126 (88%), Positives = 116/126 (92%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 8 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 67
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
AVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVR
Sbjct: 68 AVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 127
Query: 174 HVLLRQ 179
HVLLRQ
Sbjct: 128 HVLLRQ 133
>gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 244
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 139/178 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
V+R IMESGAKGCEV +SGKLR QRA+ M FK+GYMI SG ++ SAVR VLLR
Sbjct: 135 SVMRLIMESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLR 192
>gi|407409823|gb|EKF32505.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 253
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 142/187 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 43 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 102
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 103 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 162
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++D A RH LR +L
Sbjct: 163 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 222
Query: 185 VMLISVP 191
+ I +P
Sbjct: 223 KVKIMLP 229
>gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407405323|gb|EKF30377.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 214
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 142/187 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++D A RH LR +L
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 183
Query: 185 VMLISVP 191
+ I +P
Sbjct: 184 KVKIMLP 190
>gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407844360|gb|EKG01918.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407849237|gb|EKG04048.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407867308|gb|EKG08545.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 142/187 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++D A RH LR +L
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 183
Query: 185 VMLISVP 191
+ I +P
Sbjct: 184 KVKIMLP 190
>gi|355567874|gb|EHH24215.1| hypothetical protein EGK_07837 [Macaca mulatta]
Length = 207
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 123/191 (64%), Positives = 131/191 (68%), Gaps = 36/191 (18%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE LT ELAE+ YSGVE
Sbjct: 1 MAVQISKKRKFVTDGMFKAELNEFLTWELAEECYSGVE---------------------- 38
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 39 --------------KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 84
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
GVL+FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVL RQ
Sbjct: 85 GVLQFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLFRQG 144
Query: 181 SLIFVMLISVP 191
L + I +P
Sbjct: 145 VLGIKVKIMLP 155
>gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702147|gb|EMD42841.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
gi|449710680|gb|EMD49710.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
Length = 244
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 139/178 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
V+R IM+SGAKGCEV +SGKLR QRA+ M FK+GYMI SG ++ SAVR VLLR
Sbjct: 135 SVMRLIMDSGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLR 192
>gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
Length = 263
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/131 (83%), Positives = 117/131 (89%)
Query: 49 IIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK 108
+IRAT TQ VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYK
Sbjct: 49 VIRATHTQEVLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYK 108
Query: 109 LLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 168
LL GLAVRRACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+I
Sbjct: 109 LLNGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFI 168
Query: 169 DSAVRHVLLRQ 179
DSA RHVLLRQ
Sbjct: 169 DSATRHVLLRQ 179
>gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 143/199 (71%), Gaps = 23/199 (11%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGR-----RIRELTSVVQKRFKFPENSVELYAE-KVNNRGLCAIAQAESLRYKLLGG-- 112
+K + R + ++ + F + + A + + C + E L + GG
Sbjct: 61 KKDQGADFQWFRRGLNFLKTVWSFMLRKLTIGASVPLLRQSHCDTSFLEDLPF---GGKP 117
Query: 113 ------------LAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS 160
L ACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS
Sbjct: 118 EIGHYYCHIRSYLKFSLACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS 177
Query: 161 GQPVNEYIDSAVRHVLLRQ 179
GQPV +YIDSAVRHVLLRQ
Sbjct: 178 GQPVKDYIDSAVRHVLLRQ 196
>gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500]
Length = 221
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/191 (64%), Positives = 145/191 (75%), Gaps = 3/191 (1%)
Query: 4 QISKKRK--FVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+I KK + FVADGVF AELNE+ TRE +D GYSGVE++ P TEIIIRA++TQ ++G
Sbjct: 7 KIEKKWRVVFVADGVFHAELNELFTREFNKDEGYSGVELKTGPASTEIIIRASKTQAIVG 66
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ RRI EL S+VQKRF F E +V LYAEKV NRGLCAIAQA+SL+ KLL GL VRRACY
Sbjct: 67 QNARRIHELCSLVQKRFGFAEGTVTLYAEKVQNRGLCAIAQADSLKGKLLLGLPVRRACY 126
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
++ IM GAKGCEVIVSGKLRAQRAK+MKF DGYMI SGQP +D A HVLLRQ
Sbjct: 127 AIVHQIMTKGAKGCEVIVSGKLRAQRAKAMKFTDGYMIKSGQPSQNMVDFACCHVLLRQG 186
Query: 181 SLIFVMLISVP 191
+L + I +P
Sbjct: 187 TLGVKVAIMLP 197
>gi|402586120|gb|EJW80058.1| 30S ribosomal protein S3 [Wuchereria bancrofti]
Length = 202
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 124/145 (85%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
+III ATRTQ+VLGE+GRRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLR
Sbjct: 2 QIIILATRTQSVLGERGRRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLR 61
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNE 166
YKL+GGLAVRRACYGVLRFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+
Sbjct: 62 YKLVGGLAVRRACYGVLRFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVND 121
Query: 167 YIDSAVRHVLLRQVSLIFVMLISVP 191
YI AVRHV LRQ L + I +P
Sbjct: 122 YIQQAVRHVQLRQGVLGIKVKIMLP 146
>gi|41057930|gb|AAR98922.1| ribosomal protein S3, partial [Ostrinia nubilalis]
gi|441415027|dbj|BAM74497.1| ribosomal protein S3, partial [Ostrinia scapulalis]
Length = 125
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 116/124 (93%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAK
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAK 120
Query: 149 SMKF 152
SMKF
Sbjct: 121 SMKF 124
>gi|440301734|gb|ELP94120.1| 40S ribosomal protein S3-1, putative [Entamoeba invadens IP1]
Length = 246
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 138/178 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL DGYSGVE+R + +IIIRATR N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELCADGYSGVEIRKNANKFQIIIRATRASNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTS++ RF F +N +EL+ EKV +RGLC ++QAES++YK+ G+ VRRA
Sbjct: 75 DKGRRIRELTSLMISRFGFKKNCLELFVEKVASRGLCPVSQAESIKYKIAEGVPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
V++ IMESGA GCEV++SGKLR QRA+ M FK+GY+I SG ++ SA+R VLLR
Sbjct: 135 SVMKLIMESGALGCEVVISGKLRGQRAQHMIFKEGYLIKSGNATRQFYASAIRCVLLR 192
>gi|226508400|ref|NP_001142180.1| uncharacterized protein LOC100274348 [Zea mays]
gi|194707500|gb|ACF87834.1| unknown [Zea mays]
gi|413921204|gb|AFW61136.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 133
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 118/124 (95%), Gaps = 2/124 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR Y
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR--Y 118
Query: 121 GVLR 124
++R
Sbjct: 119 NLIR 122
>gi|223947579|gb|ACN27873.1| unknown [Zea mays]
gi|413917292|gb|AFW57224.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 127
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/117 (93%), Positives = 114/117 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|393905485|gb|EJD73988.1| 40S ribosomal protein S3, variant [Loa loa]
Length = 183
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 120/140 (85%), Gaps = 3/140 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLR 143
RFIMES A+GCE+ GK R
Sbjct: 127 RFIMESNAQGCEI---GKWR 143
>gi|398021515|ref|XP_003863920.1| 40S ribosomal protein S3, putative [Leishmania donovani]
gi|322502154|emb|CBZ37237.1| 40S ribosomal protein S3, putative [Leishmania donovani]
Length = 342
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 133/174 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 127 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 186
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 187 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 246
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R
Sbjct: 247 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 300
>gi|399949695|gb|AFP65353.1| 40S ribosomal protein S3 [Chroomonas mesostigmatica CCMP1168]
Length = 217
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 146/195 (74%), Gaps = 3/195 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M + +S K+KF+ DGVFF+ELNE L +EL+E+GY+ VE+R TP++ EII++ T++ ++
Sbjct: 1 MKSILSIKKKFIIDGVFFSELNEFLCKELSEEGYANVEIRKTPLKIEIILKMTQSYTIMS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRI E++++++KRF F +N + L+ EK+ NRGL A +QAE LRYKL+ G+ R+ACY
Sbjct: 61 YKGRRIGEISAMIKKRFNFGDNFISLFVEKIINRGLSANSQAELLRYKLVKGIITRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
+LR MESGAKGC + VSGK++ QRAK+MKF DGY+I SGQPV +Y++ A RH L+Q
Sbjct: 121 SILRSTMESGAKGCLISVSGKIKGQRAKTMKFIDGYIIHSGQPVEDYVEKATRHCFLKQG 180
Query: 181 SL---IFVMLISVPV 192
+ I +ML PV
Sbjct: 181 MIGVKISIMLPWDPV 195
>gi|390988241|gb|AFM36762.1| ribosomal protein S3, partial [Agrotis ipsilon]
Length = 192
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/136 (78%), Positives = 117/136 (86%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
Q+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAV
Sbjct: 6 QSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAV 65
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
RRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHV
Sbjct: 66 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 125
Query: 176 LLRQVSLIFVMLISVP 191
LLRQ L + I +P
Sbjct: 126 LLRQGVLGIKVKIMLP 141
>gi|154343872|ref|XP_001567880.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 133/174 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 177
>gi|154334600|ref|XP_001563547.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 133/174 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 177
>gi|146082044|ref|XP_001464434.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|146097654|ref|XP_001468174.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|157866908|ref|XP_001682009.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|157874873|ref|XP_001685848.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|401418259|ref|XP_003873621.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401427716|ref|XP_003878341.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 219
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 133/174 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 177
>gi|159145672|gb|ABW90373.1| putative ribosomal protein S3 [Sipunculus nudus]
Length = 126
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 113/126 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADG+F AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQ VLG
Sbjct: 1 MATQVSKKRKFVADGLFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTSVVQKRF FPE +VELY +KV NRGLCAI Q ESLRYKL+GGLAV RACY
Sbjct: 61 DKGRRIRELTSVVQKRFNFPEGTVELYVQKVANRGLCAITQCESLRYKLIGGLAVTRACY 120
Query: 121 GVLRFI 126
GVLRFI
Sbjct: 121 GVLRFI 126
>gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
Length = 210
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 138/175 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S K+K VADGVFF+E+NE+L+REL E+GYSG+E++ + ++TE+I++ RT+ ++ G+
Sbjct: 2 LSGKKKIVADGVFFSEVNELLSRELREEGYSGMELKKSSIKTELILKTVRTKQMIISGGK 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRE+T +V+KRF ++++ +Y EKV NRGL + QAE LRYKLL G+ R+ACY VLR
Sbjct: 62 RIREITLLVKKRFGLEDSNLNIYVEKVINRGLVSSIQAEFLRYKLLKGITTRKACYSVLR 121
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
IMESGAKGC + +SGKLRAQRAKSMKF +GY+I SGQ V YI S+ RH +L+Q
Sbjct: 122 SIMESGAKGCLITISGKLRAQRAKSMKFTEGYIIHSGQAVKNYISSSTRHCILKQ 176
>gi|407844367|gb|EKG01924.1| 40S ribosomal protein S3, putative, partial [Trypanosoma cruzi]
Length = 160
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 128/157 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSG 160
>gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata]
Length = 126
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 112/126 (88%)
Query: 43 PVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
P RTEIII ATRTQNVLGE+GRRIRELTS+VQKRF F + +VELYAEKV RGLCAIAQA
Sbjct: 1 PARTEIIILATRTQNVLGEEGRRIRELTSLVQKRFGFADGTVELYAEKVAQRGLCAIAQA 60
Query: 103 ESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQ 162
ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+
Sbjct: 61 ESLRYKLVGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGE 120
Query: 163 PVNEYI 168
P Y+
Sbjct: 121 PRRHYV 126
>gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians]
Length = 189
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 116/137 (84%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELTS+VQ+RF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLA
Sbjct: 1 TQNVLGEKGRRIRELTSLVQRRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLA 60
Query: 115 VRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 174
VRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMK DG MI SG+P Y+D+AVRH
Sbjct: 61 VRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKSTDGLMIHSGEPRRHYVDTAVRH 120
Query: 175 VLLRQVSLIFVMLISVP 191
V LRQ L + I +P
Sbjct: 121 VHLRQGVLGIKVKIMLP 137
>gi|432099483|gb|ELK28641.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 165
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 129/167 (77%), Gaps = 5/167 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +ISKKRK VADG+F AELN+ LT+ELAEDGYSGVE++VTP +TEIII ATR QNVL
Sbjct: 1 MAVKISKKRKLVADGIFKAELNKFLTQELAEDGYSGVEIQVTPTKTEIIIWATRMQNVLS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGL--CAIAQAESLRYKLLGGLAVRRA 118
E G+++ ELT++VQKRF E SV+ Y E V +GL CA AQAESL YKLLGGLA+ A
Sbjct: 61 ETGQQLWELTAMVQKRFGNSEGSVDFYDETVATKGLLVCATAQAESLHYKLLGGLAMLWA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVN 165
Y +L+FIMES AKGC+V+VS K QRAKSMKF +G M G PVN
Sbjct: 121 FYSMLQFIMESRAKGCKVMVSEKHLGQRAKSMKFVNGLM---GDPVN 164
>gi|410040211|ref|XP_003950757.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040213|ref|XP_003950758.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040215|ref|XP_003950759.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
Length = 122
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/122 (85%), Positives = 110/122 (90%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+NE LT+ELAEDGYSGVE+RVTP RTEIII ATRTQNVLGEKG RIRELT+VVQKRF P
Sbjct: 1 MNEFLTQELAEDGYSGVEMRVTPTRTEIIILATRTQNVLGEKGWRIRELTAVVQKRFGSP 60
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
E SVELYAEKV RGLCAIAQAESL YKLLGGLAVRRACYG L FIME+GAKGCEV+VSG
Sbjct: 61 EGSVELYAEKVATRGLCAIAQAESLPYKLLGGLAVRRACYGALWFIMETGAKGCEVVVSG 120
Query: 141 KL 142
KL
Sbjct: 121 KL 122
>gi|149068846|gb|EDM18398.1| rCG40478, isoform CRA_h [Rattus norvegicus]
Length = 151
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/117 (90%), Positives = 108/117 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|308802702|ref|XP_003078664.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
gi|116057117|emb|CAL51544.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
Length = 120
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/117 (88%), Positives = 110/117 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRT NVLG
Sbjct: 1 MATNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTANVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT++VQ+RF F E +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTTLVQRRFGFAEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRR 117
>gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila]
gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210]
gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila]
Length = 243
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 134/175 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
I+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TP +TEI I+AT+ Q V+G +G+
Sbjct: 8 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+ +ELT +QKRF + ++ ++++AE + +GLCA AQ E++ YKLL + VR A +++
Sbjct: 68 KHKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIK 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+++ GAKGCE+I+SGKL+ QRAK+MKFK GYMI +GQP N+YID AVRHV +Q
Sbjct: 128 SVIQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQ 182
>gi|395833096|ref|XP_003789581.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Otolemur
garnettii]
gi|395833098|ref|XP_003789582.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Otolemur
garnettii]
Length = 123
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/123 (86%), Positives = 110/123 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVAD +F AELNE LTRE+AEDGYSGVEVRVTP RT III ATRT+NVLG
Sbjct: 1 MAVQISKKRKFVADDIFKAELNEFLTREVAEDGYSGVEVRVTPTRTAIIILATRTRNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGR IRELT+VVQKRF FPE SVELYAEK RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRCIRELTAVVQKRFGFPEGSVELYAEKGATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVL 123
GVL
Sbjct: 121 GVL 123
>gi|379072588|gb|AFC92926.1| ribosomal protein S3B, partial [Pipa carvalhoi]
gi|379072590|gb|AFC92927.1| ribosomal protein S3B, partial [Rhinophrynus dorsalis]
Length = 162
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/126 (81%), Positives = 109/126 (86%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFV 185
IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L
Sbjct: 61 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 120
Query: 186 MLISVP 191
+ I +P
Sbjct: 121 VKIMLP 126
>gi|3642663|gb|AAC36521.1| ribosomal protein S3, partial [Mus musculus]
Length = 123
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/114 (87%), Positives = 104/114 (91%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 61 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 114
>gi|340505471|gb|EGR31795.1| hypothetical protein IMG5_102040 [Ichthyophthirius multifiliis]
Length = 676
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 133/176 (75%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QI+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TP++ EI I+AT+ Q+V+G +G
Sbjct: 7 QINKKKKFVADGVFNAELHCFFSKSLQDAGYAGIEVRRTPMKIEIRIKATKPQHVIGLEG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
++ +ELT +QKRF + + +++ AE V N+GLCA AQ E+L YKLL + VR A ++
Sbjct: 67 KKHKELTYFLQKRFGYANDQLQILAEPVKNKGLCASAQVEALNYKLLKDVPVRLAANYII 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
R ++ GAKGCEVI+SGKL+ QRAK+MKFK GYMI +GQP +Y+D AVRHV +Q
Sbjct: 127 RQVINDGAKGCEVIISGKLQQQRAKTMKFKQGYMICTGQPRKDYVDVAVRHVFFKQ 182
>gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens]
Length = 133
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 102/112 (91%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM
Sbjct: 12 ELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 71
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 72 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 123
>gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta]
gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta]
Length = 218
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 137/179 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ ++S K+KFVADGV ++E+NE L REL E+G+SG++++ + EIII++++ ++G
Sbjct: 2 LGYRLSLKKKFVADGVVYSEINEFLERELKENGFSGIKIKKKIEKVEIIIKSSKAHTIIG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KG+RIREL +++KRF F EN + LY EK+NNR LC I QAESLRYK+L G +R+ACY
Sbjct: 62 FKGKRIRELNVLLKKRFNFGENKLVLYVEKINNRNLCPINQAESLRYKILRGFVLRKACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+LR +E+GAKGC + VSGKLRAQRAK+MKF DGY+I SG+P EY SA+RH LL Q
Sbjct: 122 SILRSTIEAGAKGCIISVSGKLRAQRAKTMKFMDGYIIHSGKPSEEYTKSAIRHCLLPQ 180
>gi|351707112|gb|EHB10031.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 127
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 106/126 (84%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAV RACYGVL F
Sbjct: 2 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVLRACYGVLWF 61
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFV 185
IMESGAKGCEV VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L
Sbjct: 62 IMESGAKGCEVFVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 121
Query: 186 MLISVP 191
+ I +P
Sbjct: 122 VKIMLP 127
>gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
Length = 194
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 100/112 (89%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIM
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
ESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 61 ESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 112
>gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea]
Length = 194
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 100/112 (89%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIM
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
ESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQ
Sbjct: 61 ESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 112
>gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 202
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 112/134 (83%)
Query: 46 TEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
TE+II AT+TQ+VLGE RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESL
Sbjct: 20 TEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESL 79
Query: 106 RYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVN 165
RYKL GL VR+ACYG+LRFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN
Sbjct: 80 RYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVN 139
Query: 166 EYIDSAVRHVLLRQ 179
Y+D AVRHV L Q
Sbjct: 140 YYVDKAVRHVQLPQ 153
>gi|403340419|gb|EJY69494.1| 40S ribosomal protein S3 [Oxytricha trifallax]
Length = 243
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 136/180 (75%), Gaps = 4/180 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+I+ K+KFVADGVF AELNE LTR L DGY+G+EVR T + TEI ++AT+T+ +L +
Sbjct: 11 KINTKKKFVADGVFQAELNEFLTRCLGMDGYAGIEVRATSMSTEIRVKATKTREILEKSA 70
Query: 64 RRIRELTSVVQKRFKFP--ENSVELYAEKVN-NRGLCAIAQAESLRYKLLGGLAVRRACY 120
R++REL S+++KR+ F +N VEL + + ++ LCA AQAE+L+YKLLGG VR A
Sbjct: 71 RKVRELKSLIEKRYNFNDVDNKVELAIKPLPYDKNLCAAAQAENLKYKLLGGTPVRLAAN 130
Query: 121 GVLRFIME-SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+L +M+ GAKGCE+I+SGK+R QRAKS K+K GY+IS+GQP E++D AVRHV LRQ
Sbjct: 131 NILAQVMKRGGAKGCEIIISGKIRGQRAKSQKYKQGYIISTGQPKLEFVDEAVRHVELRQ 190
>gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
Length = 216
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 137/193 (70%), Gaps = 3/193 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A + +K R+ + G+F+AELNE+LTREL ++GY G EVR TP RTEIII+A T+ +
Sbjct: 3 AQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDN 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
GRR++E+ ++QKR++ E+S+E++ +++ +GL A+ Q ESLRYKL+ + RRA Y
Sbjct: 63 HGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYS 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
++RF+M++GA+GCEV +SGKLR RA + K+K+GYM+ SG +++ AV H+ ++Q +
Sbjct: 123 IIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQAT 182
Query: 182 L---IFVMLISVP 191
+ + +ML P
Sbjct: 183 IGIRVLIMLAQDP 195
>gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 244
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/124 (73%), Positives = 108/124 (87%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
+ VLGEKGRRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL V
Sbjct: 46 RKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPV 105
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
RRA YGVLRF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V
Sbjct: 106 RRAAYGVLRFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNV 165
Query: 176 LLRQ 179
+RQ
Sbjct: 166 DMRQ 169
>gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 129/178 (72%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TPV+T+I I+A T V G
Sbjct: 4 ARQMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGP 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GR++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR A
Sbjct: 64 EGRKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANA 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VL+ IM GA G E I+SGKL QRAKSMK++ GY+IS+GQP + ID AVRH +Q
Sbjct: 124 VLKQIMADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQ 181
>gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus]
Length = 111
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/111 (87%), Positives = 101/111 (90%)
Query: 36 GVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
GVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV RG
Sbjct: 1 GVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFDFAPGTVELYAEKVATRG 60
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQR 146
LCAIAQAESLR KL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QR
Sbjct: 61 LCAIAQAESLRCKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQR 111
>gi|384494103|gb|EIE84594.1| 40S ribosomal protein [Rhizopus delemar RA 99-880]
Length = 131
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 106/119 (89%), Gaps = 1/119 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISKKRK VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGE
Sbjct: 3 AVQISKKRK-VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGE 61
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLA CY
Sbjct: 62 KGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLACLLRCY 120
>gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 128/176 (72%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TPV+T+I I+A T V G +G
Sbjct: 6 QMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
R++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR A VL
Sbjct: 66 RKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+ IM GA G E I+SGKL QRAKSMK++ GY+IS+GQP + ID AVRH +Q
Sbjct: 126 KQIMADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQ 181
>gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|360045524|emb|CCD83072.1| putative 40s ribosomal protein S3 [Schistosoma mansoni]
Length = 152
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/150 (63%), Positives = 118/150 (78%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
EL+E L RELA+DGYS +VR + TE+II AT+TQ+VLGE RIREL SV+QKRF F
Sbjct: 3 ELDEFLKRELADDGYSASQVRESRKYTEVIILATKTQSVLGEDSLRIRELASVLQKRFGF 62
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ ++ L+ +K+ RGL AIAQAESLRYKL GL VR+ACYG+LRFI+ESGA+G VIVS
Sbjct: 63 SDCALGLFVDKMIFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIIESGARGVGVIVS 122
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
GK++ QRAK+MKF +G +I SG PVN YID
Sbjct: 123 GKIKDQRAKAMKFCNGLIIHSGDPVNNYID 152
>gi|440906791|gb|ELR57014.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 220
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 117/180 (65%), Gaps = 28/180 (15%)
Query: 1 MATQISK-KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA QISK + F DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT+N L
Sbjct: 1 MAVQISKIESVFEEDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTENAL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G++G RI+E T VVQKR FPE +V LYAEKV LCAI QAESL Y+L GGL V RA
Sbjct: 61 GKEGWRIQEFTVVVQKRCGFPECTVALYAEKVATGNLCAIVQAESLHYRLPGGLTVPRAY 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YG LRFIM G K S PVN Y+D++ RHVLLRQ
Sbjct: 121 YGELRFIM--GPKAV-------------------------SEDPVNYYVDTSARHVLLRQ 153
>gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO]
Length = 184
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/119 (68%), Positives = 104/119 (87%)
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 5 KNGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 64
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQ
Sbjct: 65 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 123
>gi|379072592|gb|AFC92928.1| ribosomal protein S3B, partial [Hymenochirus curtipes]
Length = 152
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 99/126 (78%), Gaps = 10/126 (7%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQA LAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQA----------LAVRRACYGVLRF 50
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFV 185
IMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG PVN Y+D+AVRHVLLRQ L
Sbjct: 51 IMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 110
Query: 186 MLISVP 191
+ I +P
Sbjct: 111 VKIMLP 116
>gi|441645490|ref|XP_003254540.2| PREDICTED: 40S ribosomal protein S3 [Nomascus leucogenys]
Length = 181
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/101 (83%), Positives = 90/101 (89%)
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+P ++LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+V
Sbjct: 17 YPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVV 76
Query: 139 SGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
SGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 77 SGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 117
>gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens]
Length = 158
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 91/106 (85%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
RAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ L + I +P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLP 106
>gi|410039268|ref|XP_003950581.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like [Pan
troglodytes]
Length = 238
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 125/192 (65%), Gaps = 8/192 (4%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKRKFV DG+ EL + TRELAEDGYSGVEV++ RTEIII AT+TQNVLG
Sbjct: 1 MGVQISKKRKFVTDGILKVELKKFXTRELAEDGYSGVEVQIMSTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG +I++L +VVQKR PE SVEL+A KV RG+C A ES Y LLGGLA +RAC
Sbjct: 61 EKGWQIQKLPAVVQKRSGXPEGSVELFAGKVATRGMCVFAXVESQCY-LLGGLAAQRACC 119
Query: 121 GVLRFIMES-GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVL FI GA G + +VS + +K KF D MI S V ID+A+ VLL+Q
Sbjct: 120 GVLWFIRRGXGATGFKAVVS-----ENSKCRKFVDDLMILSRNSVY-LIDTAMCQVLLQQ 173
Query: 180 VSLIFVMLISVP 191
L + +P
Sbjct: 174 GVLAIKXKVMLP 185
>gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii]
Length = 250
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 91/106 (85%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LYAEKV RGLCAIAQ ESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 71 LYAEKVAARGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 130
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
RAKSMKF DG MI SG PVN+Y+D+AVRHV+LRQ L + I +P
Sbjct: 131 RAKSMKFVDGLMIHSGNPVNDYVDTAVRHVMLRQGVLGIKVKIMLP 176
>gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 165
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 89/106 (83%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
+YAEKV RGLCA AQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 MYAEKVATRGLCATAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
RAKSMKF DG MI SG P NEY+D+A RHVLLRQ L + I +P
Sbjct: 61 RAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLP 106
>gi|95116517|gb|ABF56171.1| 40S ribosomal protein S3 [Theobroma cacao]
Length = 86
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/86 (97%), Positives = 85/86 (98%)
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 1 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 60
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR 143
ACYGVLRFIMESGAKGCEV+VSG LR
Sbjct: 61 ACYGVLRFIMESGAKGCEVMVSGXLR 86
>gi|149068843|gb|EDM18395.1| rCG40478, isoform CRA_e [Rattus norvegicus]
Length = 129
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/97 (87%), Positives = 87/97 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLC 97
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLW 97
>gi|148684440|gb|EDL16387.1| ribosomal protein S3, isoform CRA_b [Mus musculus]
Length = 129
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL ++ +G A R C
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLWPAMVCFGSLWR-VGPRAARLWCL 119
Query: 121 G 121
G
Sbjct: 120 G 120
>gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus]
Length = 157
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 88/104 (84%)
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRA 147
AEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRA
Sbjct: 1 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 60
Query: 148 KSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
KSMKF DG MI SG P NEY+D+A RHVLLRQ L + I +P
Sbjct: 61 KSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLP 104
>gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus]
Length = 158
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/106 (75%), Positives = 89/106 (83%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACYGVLR+IME GAKGCEV+VSGKLR Q
Sbjct: 2 LYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKLRGQ 61
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
RAKSMKF DG MI SG P N+Y+D+A RHVLLRQ L + I +P
Sbjct: 62 RAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIMLP 107
>gi|347527|gb|AAA18095.1| ribosomal protein S3, partial [Homo sapiens]
Length = 95
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 86/95 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>gi|443917610|gb|ELU38287.1| 40S ribosomal protein S3 [Rhizoctonia solani AG-1 IA]
Length = 592
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 127/225 (56%), Gaps = 46/225 (20%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEI-----IIRATRT 55
MA+QISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTE+ + A+
Sbjct: 285 MASQISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEVSLSPETLYASGF 344
Query: 56 QNVLGEKGRRIRELTSVVQ----KRFKFPENSVELY---AEKVNNRGLCAIAQAESLRYK 108
N G R+ + V + KR +S L + R +C + + ++ ++
Sbjct: 345 PNARLNFGNRLSSVRLVPKMYSVKRDAGSGSSRRLSKSGSSSPKTRSICMLKRCRAVVFR 404
Query: 109 LL----------------------------------GGLAVRRACYGVLRFIMESGAKGC 134
LL G ++ ACYGVLRF+MESGAKGC
Sbjct: 405 LLRSASRCGTSYWVDSLFVGEFDSSFGCARGVGADSPGGNLKSACYGVLRFVMESGAKGC 464
Query: 135 EVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
EV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQ
Sbjct: 465 EVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 509
>gi|426369813|ref|XP_004051878.1| PREDICTED: 40S ribosomal protein S3 isoform 5 [Gorilla gorilla
gorilla]
Length = 154
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 79/85 (92%)
Query: 95 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 154
GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF D
Sbjct: 6 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVD 65
Query: 155 GYMISSGQPVNEYIDSAVRHVLLRQ 179
G MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 66 GLMIHSGDPVNYYVDTAVRHVLLRQ 90
>gi|426375157|ref|XP_004054412.1| PREDICTED: 40S ribosomal protein S3-like [Gorilla gorilla
gorilla]
Length = 110
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 82/92 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE G SGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEHGCSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVN 92
EKGRRIRELT+VVQKRF FPE SVELYAEK N
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKCN 92
>gi|149068851|gb|EDM18403.1| rCG40478, isoform CRA_m [Rattus norvegicus]
Length = 98
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 99/172 (57%), Gaps = 63/172 (36%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTP+ TEIIIRAT+T NVLGEKG+
Sbjct: 1 MSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I+ELTS LLGGLA+
Sbjct: 61 KIKELTS-------------------------------------LLGGLAM--------- 74
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVL 176
L AQRAKSMKFKDGY+ISSGQPV +YID AVRHVL
Sbjct: 75 -----------------LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHVL 109
>gi|444729886|gb|ELW70289.1| 40S ribosomal protein S3-A [Tupaia chinensis]
Length = 174
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 84/100 (84%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
+K RKFV G+F AELNE LT+ELA+DGYSGVE RVTP RTEIII ATRTQNVLGEKG++
Sbjct: 75 AKNRKFVTYGIFKAELNEFLTQELAKDGYSGVEGRVTPTRTEIIILATRTQNVLGEKGQQ 134
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
RELT+V+QKRF FPE SVELYAEKV R L AI QAESL
Sbjct: 135 TRELTAVIQKRFGFPEGSVELYAEKVATRSLFAIVQAESL 174
>gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 113/171 (66%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G++ +E+R+ +II++ + +GEK R+++
Sbjct: 19 KRFMKNGLMNAELKEFFEKALVNEGFNTMELRMQETPIKIILKVAKPHEAIGEKKYRLKQ 78
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RR+ L+ +
Sbjct: 79 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKMLGGVQYRRSVNMALKAVRH 138
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
SGA+GC++IVSGKL+ QRAKS+KF+DG +I SG PV +YID+ V +Q
Sbjct: 139 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNPVKDYIDTGYATVETKQ 189
>gi|238613775|ref|XP_002398529.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
gi|215475235|gb|EEB99459.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
Length = 100
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/85 (87%), Positives = 78/85 (91%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
IIIRAT TQ VLGEKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRY
Sbjct: 1 IIIRATHTQEVLGEKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRY 60
Query: 108 KLLGGLAVRRACYGVLRFIMESGAK 132
KLL GLAVRRACYGVLRF+MESGAK
Sbjct: 61 KLLNGLAVRRACYGVLRFVMESGAK 85
>gi|149641402|ref|XP_001506205.1| PREDICTED: 40S ribosomal protein S3-A-like, partial
[Ornithorhynchus anatinus]
Length = 85
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 77/85 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVPISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|401828611|ref|XP_003888019.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
gi|392999027|gb|AFM99038.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
Length = 216
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 112/171 (65%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKIRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+
Sbjct: 68 FQHLVAQRLEVPDENVEIVVEKVHEKGLCALIQANFIREKMLGGVQYRRAVNMALKATRH 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
SGA+GC++IVSGKL+ QRAKS+KF+DG +I SG VN+YI++ V +Q
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVNDYINTGYATVETKQ 178
>gi|395539389|ref|XP_003771653.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like
[Sarcophilus harrisii]
Length = 361
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 105/173 (60%), Gaps = 34/173 (19%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QI+KKR F ADG+F E E LTR++AEDGYSGV P RTEII+ ATRT +LG
Sbjct: 1 MVVQIAKKRNFAADGIFKPEX-EFLTRKVAEDGYSGVRY---PTRTEIILLATRT--LLG 54
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ LT VVQK F FPE + A SL YKLLGGLAV RAC
Sbjct: 55 HX--KFVNLTPVVQK-FGFPE------------------SNATSLCYKLLGGLAVCRACC 93
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
G E G KGCE+++SGKLR QRAKSMKF D MI SG P+N YID AV
Sbjct: 94 G------EWG-KGCEMVMSGKLRGQRAKSMKFVDVLMIQSGDPLNHYIDIAVH 139
>gi|396082067|gb|AFN83679.1| 40S ribosomal protein S3 [Encephalitozoon romaleae SJ-2008]
Length = 216
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 111/171 (64%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKVLVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKLRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+
Sbjct: 68 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKATRH 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
SGA+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI++ V +Q
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVKDYINTGYATVETKQ 178
>gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1]
gi|51701889|sp|Q8SQM3.1|RS3_ENCCU RecName: Full=40S ribosomal protein S3
gi|449330262|gb|AGE96522.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi]
Length = 228
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 108/170 (63%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ +
Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 140
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
A+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI++ V +Q
Sbjct: 141 KAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQ 190
>gi|392513001|emb|CAD27095.2| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1]
Length = 216
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 108/170 (63%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 9 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 68
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ +
Sbjct: 69 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 128
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
A+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI++ V +Q
Sbjct: 129 KAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQ 178
>gi|28189751|dbj|BAC56490.1| similar to ribosomal protein S3 [Bos taurus]
Length = 77
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/77 (90%), Positives = 72/77 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRF 77
EKGRRIRELT+VVQKRF
Sbjct: 61 EKGRRIRELTAVVQKRF 77
>gi|159163349|pdb|1WH9|A Chain A, Solution Structure Of The Kh Domain Of Human Ribosomal
Protein S3
Length = 92
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/79 (88%), Positives = 71/79 (89%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKR
Sbjct: 8 FKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKR 67
Query: 77 FKFPENSVELYAEKVNNRG 95
F FPE SVELYAEKV RG
Sbjct: 68 FGFPEGSVELYAEKVATRG 86
>gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae]
Length = 216
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 107/168 (63%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+ G+ AEL+E + EL E+GY G+++++ + +I IR + ++V+G+K R+ +
Sbjct: 12 IQKGLMHAELDEFFSIELKEEGYGGMDIKLHEMPVQITIRVNKPEDVMGDKKSRLNLIKH 71
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
++ +RF + VE+ E + N+GLC + QA+ +R KL G+ RRA + ++ I + GA
Sbjct: 72 LLMQRFPLLSSGVEINVEMIKNKGLCPMTQADFIRVKLFSGIPFRRAVHAAMKSIKDGGA 131
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+GC +I+SGKL+ QRAKS+K++ G MI +G ++ A+ VLL+Q
Sbjct: 132 QGCVIIISGKLKGQRAKSVKYQQGLMIHTGNDRKLFVKEAISTVLLKQ 179
>gi|149068841|gb|EDM18393.1| rCG40478, isoform CRA_c [Rattus norvegicus]
Length = 105
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/77 (89%), Positives = 71/77 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRF 77
EKGRRIRELT+VVQKR
Sbjct: 61 EKGRRIRELTAVVQKRH 77
>gi|402466373|gb|EJW01879.1| ribosomal protein S3 [Edhazardia aedis USNM 41457]
Length = 227
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 104/171 (60%), Gaps = 1/171 (0%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATR-TQNVLGEKGRRIRE 68
+F+ +G+ +AELNE T+E DGY+G E+ + I ++ ++ T V+G RI++
Sbjct: 15 RFIKNGLIYAELNEYFTKEFYADGYAGCEIFHNSIPMRIYLKVSKPTAEVIGTNKCRIKQ 74
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ S++ KR +N V++ E + +GLC QA ++ +LL +VRRA Y +R E
Sbjct: 75 VRSLIAKRLGMADNDVDILVEMIKKKGLCPFTQAVNIAQRLLVNASVRRAVYSSIRAAKE 134
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GA+G EVIVSGK + QRA+S KF DG MI SGQP +Y+ + V +RQ
Sbjct: 135 EGAQGIEVIVSGKTKGQRARSTKFIDGLMIHSGQPAKDYVKTGFTAVEMRQ 185
>gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 138
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 72/86 (83%)
Query: 94 RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFK 153
RGL AIAQAESLRYKL GL VR+ACYG+LRFIMESGA+G EVIVSGK++ QRAK+MKF
Sbjct: 4 RGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKGQRAKAMKFC 63
Query: 154 DGYMISSGQPVNEYIDSAVRHVLLRQ 179
DG MI SG PVN Y+D AVRHV L Q
Sbjct: 64 DGLMIHSGDPVNYYVDKAVRHVQLPQ 89
>gi|148684441|gb|EDL16388.1| ribosomal protein S3, isoform CRA_c [Mus musculus]
Length = 97
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 72/85 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQ P ++
Sbjct: 61 EKGRRIRELTAVVQNHQPCPSQCLQ 85
>gi|440493994|gb|ELQ76410.1| 40S ribosomal protein S3 [Trachipleistophora hominis]
Length = 214
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 3/180 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ V +IIIR +T +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFGKELMESGYSSMKFLAHEVPLKIIIRVLKTDDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+V+KR K V + E V ++GLC QAE +R K+ GLA RRA G LR I E+GA
Sbjct: 74 LVKKRLK---KDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLAYRRAVNGALRTIKEAGA 130
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
+GC ++VSGKL+ QRA+S K I SG P EY+ V L+Q + ++ I +P
Sbjct: 131 QGCIIVVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMRGGKSTVHLKQGVIGIIVKIMLP 190
>gi|387594476|gb|EIJ89500.1| hypothetical protein NEQG_00270 [Nematocida parisii ERTm3]
gi|387596684|gb|EIJ94305.1| hypothetical protein NEPG_00972 [Nematocida parisii ERTm1]
Length = 244
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
V G+ + ELNE+ ++ + DGY+G++ + EI ++ + +L + RI++L
Sbjct: 20 IVNQGLIYTELNEMFSKFMENDGYAGMDYKPYTSPIEITLKLGKPSGMLEDNKLRIKQLI 79
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
S++Q RF+ E SV ++ E+V NR L A QA+ ++ KL GL VRR G +R IME G
Sbjct: 80 SLIQMRFRLEEGSVSIFIEQVKNRALNAQIQADLIKEKLGAGLPVRRVVSGAIRTIMEGG 139
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
A G EVI+SGKL+ QRA+S K +G + SG +Y+ + +LL+Q
Sbjct: 140 ASGAEVIISGKLKGQRARSYKVSEGILKHSGNSTKDYVKKGMSSILLKQ 188
>gi|323303371|gb|EGA57167.1| Rps3p [Saccharomyces cerevisiae FostersB]
Length = 136
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 69/75 (92%)
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV 164
+++KLL GLA+RRA YGV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPV
Sbjct: 1 MKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPV 60
Query: 165 NEYIDSAVRHVLLRQ 179
N++ID+A RHVL+RQ
Sbjct: 61 NDFIDTATRHVLMRQ 75
>gi|429965063|gb|ELA47060.1| ribosomal protein S3 [Vavraia culicis 'floridensis']
Length = 214
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ V +IIIR + +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFAKELMESGYSSMKFLAHEVPLKIIIRVLKADDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+V+KR V + E V ++GLC QAE +R K+ GL RRA G LR I E+GA
Sbjct: 74 LVKKRLN---KDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLTYRRAVNGALRTIKEAGA 130
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
+GC +IVSGKL+ QRA+S K I SG P EY+ V L+Q + ++ I +P
Sbjct: 131 QGCIIIVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMREGKSTVHLKQGVIGIIVKIMLP 190
>gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 70/79 (88%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
EIII AT+TQNVLG+KGR+IRELTSVVQKRF+F EN+VELYAEK NNR AIAQAESLR
Sbjct: 330 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLR 389
Query: 107 YKLLGGLAVRRACYGVLRF 125
+KLLGGL VRRA YGVL F
Sbjct: 390 FKLLGGLVVRRAGYGVLSF 408
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 83/147 (56%), Gaps = 50/147 (34%)
Query: 46 TEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
TEIII AT+TQNVL +KG++IRELTSVVQKR
Sbjct: 110 TEIIIHATQTQNVLCKKGKKIRELTSVVQKR----------------------------- 140
Query: 106 RYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVN 165
F+MESG KGCEVI+SGKL Q AKS+KFKDGY+I SGQ V
Sbjct: 141 -------------------FVMESGTKGCEVIMSGKLCVQCAKSIKFKDGYLIFSGQLVK 181
Query: 166 EYIDSAVRHVLLRQ--VSLIFVMLISV 190
+YIDS VRHVLL+Q +S+ FV + +
Sbjct: 182 DYIDSTVRHVLLKQGILSIKFVFYLCI 208
>gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 157
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 100 AQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIS 159
AQAESLRYKLLGGL VRRA YGVLRF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S
Sbjct: 1 AQAESLRYKLLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLS 60
Query: 160 SGQPVNEYIDSAVRHVLLRQ 179
+G P Y+D A+R+V +RQ
Sbjct: 61 TGTPKEMYVDQAIRNVDMRQ 80
>gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581]
Length = 217
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 103/170 (60%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTADSICVIIQCAEPEIVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
++ RF + ++ +K+ RGL A ++LR KL + +RRA Y V+R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSVIRTAMRA 135
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GA GCEVIV+GKLRAQRA++ KFK+G +IS+G P ++ A RH+ +RQ
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQ 185
>gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15]
Length = 217
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 103/170 (60%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
++ RF + ++ +K+ RGL A ++LR KL + +RRA Y ++R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GA GCEVIV+GKLRAQRA++ KFK+G +IS+G P ++ A RH+ +RQ
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQ 185
>gi|170055465|ref|XP_001863594.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167875417|gb|EDS38800.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 278
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 84/150 (56%), Gaps = 42/150 (28%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAE 89
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT++VQK +
Sbjct: 73 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAIVQKLIR----------- 121
Query: 90 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKS 149
+RRAC +ESGAKG EV+VSGKLR QRAKS
Sbjct: 122 ------------------------DLRRAC-------LESGAKGSEVVVSGKLRGQRAKS 150
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MKF DG +I S P NEY D+A RH+LLRQ
Sbjct: 151 MKFVDGMVIHSRDPCNEYSDTATRHILLRQ 180
>gi|378756656|gb|EHY66680.1| hypothetical protein NERG_00320 [Nematocida sp. 1 ERTm2]
Length = 243
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 104/179 (58%), Gaps = 4/179 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +S V+ G+ + ELNE+ ++ + D Y+G++ + EI ++ + +L
Sbjct: 14 MADDLS----IVSQGMVYTELNEMFSKFMINDEYAGMDYKPYSSPIEITLKLGKPAGMLE 69
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
RI++L +++Q RF+ E SV ++ E+V N+ L A QA +R K+ L VRRA
Sbjct: 70 NNKLRIKQLITLIQMRFRLEEGSVSIFIEQVKNKALNAQIQANQIREKIGASLPVRRAVS 129
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
G +R IME GA G EVI+SGKL+ QRA+S K G M SG + +Y+ + +LL+Q
Sbjct: 130 GAIRTIMEGGAAGVEVIISGKLKGQRARSYKVVGGIMKHSGDSIKDYVKKGMSSILLKQ 188
>gi|149391165|gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/59 (98%), Positives = 59/59 (100%)
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 1 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 59
>gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
Length = 214
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 104/171 (60%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KF+ADG+ FAEL E+ + L +G+S +E+R+ ++I++ + Q ++G+K +I +
Sbjct: 8 KKFIADGMIFAELKELFEKCLINEGFSSLELRLEESPVKVILKVVKPQELIGDKKWKIVQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ +V R P+++V + +KV +GLC + QA +R K+L + +RA VL+
Sbjct: 68 IQHLVASRLSLPDSNVVVIIDKVVEKGLCPVYQANLIREKMLANIPHKRAANLVLKNTKF 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+GA GC V +SGKL+ RA + KF +G +I SGQP +Y+ + V +Q
Sbjct: 128 AGATGCLVTISGKLKGLRACTKKFLEGVVIKSGQPSRDYVKKHITTVNTKQ 178
>gi|4680363|gb|AAD27643.1|AF133129_1 ribosomal protein S3 [Meriones unguiculatus]
Length = 128
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 58/64 (90%)
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
RRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHV
Sbjct: 1 RRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 60
Query: 176 LLRQ 179
LLRQ
Sbjct: 61 LLRQ 64
>gi|402584605|gb|EJW78546.1| hypothetical protein WUBG_10543 [Wuchereria bancrofti]
Length = 103
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 69/82 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+GR
Sbjct: 1 MSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGR 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
RIRELTSVVQKRF F + +VE+
Sbjct: 61 RIRELTSVVQKRFGFADGTVEV 82
>gi|326914668|ref|XP_003203646.1| PREDICTED: 40S ribosomal protein S3-like, partial [Meleagris
gallopavo]
Length = 63
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/63 (92%), Positives = 59/63 (93%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLA
Sbjct: 1 TQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLA 60
Query: 115 VRR 117
VRR
Sbjct: 61 VRR 63
>gi|8247324|emb|CAB92940.1| putative 40S ribosomal protein S3 [Plasmodium falciparum 3D7]
Length = 110
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 67/86 (77%)
Query: 112 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
GLAVRRACYGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A
Sbjct: 2 GLAVRRACYGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTA 61
Query: 172 VRHVLLRQVSLIFVMLISVPVIVLER 197
R L+Q L + I +P + R
Sbjct: 62 TRSAQLKQGVLGIKVKIMLPTAIDTR 87
>gi|223477921|ref|YP_002582383.1| 30S ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
gi|214033147|gb|EEB73975.1| SSU ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
Length = 209
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3]
gi|259495259|sp|C5A280.1|RS3_THEGJ RecName: Full=30S ribosomal protein S3
gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3]
Length = 209
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|315139154|gb|ADT80771.1| ribosomal protein S3 [Heliothis subflexa]
gi|315139156|gb|ADT80772.1| ribosomal protein S3 [Heliothis virescens]
Length = 126
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 61/75 (81%)
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVL
Sbjct: 1 RACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVL 60
Query: 177 LRQVSLIFVMLISVP 191
LRQ L + I +P
Sbjct: 61 LRQGVLGIKVKIMLP 75
>gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis]
gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis]
Length = 214
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 98/171 (57%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K +A+G+ +AE+ E + L +G+S V++R +I+++ + + GEK ++++
Sbjct: 8 KKVIANGILYAEIKEFCEKALIPEGFSSVDIRFDENPIKIVLKVVKPHELTGEKKFKLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L + R PE ++ + +KV +GLC + QA ++ K+L G+ +RA VLR
Sbjct: 68 LQHLFASRLNVPEMNINIIIDKVVEKGLCPVFQANLIKEKMLAGVQYKRAANLVLRNTKF 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+GA GC + +SGKL+ RA + KF +G +I SGQP +Y+ V +Q
Sbjct: 128 AGATGCLITISGKLKGLRACTKKFLEGVVIKSGQPSKDYVKKYTTTVNTKQ 178
>gi|224034403|gb|ACN36277.1| unknown [Zea mays]
gi|413917293|gb|AFW57225.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
gi|413917294|gb|AFW57226.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 103
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/53 (100%), Positives = 53/53 (100%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 1 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 53
>gi|262401161|gb|ACY66483.1| putative 40S ribosomal protein RPS3 [Scylla paramamosain]
Length = 66
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 58/66 (87%)
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNE 166
YKL+GGLAVRRACYGVL FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P
Sbjct: 1 YKLVGGLAVRRACYGVLCFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGEPRRH 60
Query: 167 YIDSAV 172
Y+D+AV
Sbjct: 61 YVDAAV 66
>gi|308802700|ref|XP_003078663.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
gi|116057116|emb|CAL51543.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
Length = 145
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Query: 115 VRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 174
VR ACYGVLR+IMESGAKG EV+VSGKLR QRAK+MKFKDGYMISSG PV +YI S RH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 175 VLLRQVSL---IFVMLISVP 191
LLRQ ++ + +ML P
Sbjct: 90 ALLRQGTIGMRVKIMLDHDP 109
>gi|224154183|ref|XP_002337443.1| predicted protein [Populus trichocarpa]
gi|222839282|gb|EEE77619.1| predicted protein [Populus trichocarpa]
Length = 73
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 55/56 (98%)
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 2 KGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 57
>gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3 [Methanosarcina barkeri str. Fusaro]
gi|91207819|sp|Q46GA1.1|RS3_METBF RecName: Full=30S ribosomal protein S3
gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
Length = 311
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 2/162 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV DG A ++E +L GY G+E+ TP+ T+I+I + + V+G+ G+ IR
Sbjct: 4 ERKFVNDGFVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V R+ EN ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVAARYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+GA GCEV++SGKL R++ KF DGY+ SG PV+E +D
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVDEVVD 163
>gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3 [Thermococcus kodakarensis KOD1]
gi|73918002|sp|Q5JDH5.1|RS3_PYRKO RecName: Full=30S ribosomal protein S3
gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1]
Length = 209
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLK 172
>gi|374630584|ref|ZP_09702969.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
gi|373908697|gb|EHQ36801.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
Length = 242
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S +++FV DGV A + + L +EL GY G E+ TP+ T++ I A + V+G+ G+
Sbjct: 1 MSVEKRFVEDGVRAARVEKFLVKELKRAGYGGTEIIRTPLGTQVTIFAEKPGIVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+RELTS +Q + S ++ ++V N A AE L L G R+A ++R
Sbjct: 61 VVRELTSTLQNDYGI--ESPQIEVQQVENPSFNAQIMAERLANSLERGWYFRKAGSSIMR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
IMESGA GCEV+VSGKL RA+ KF +GY+ +G+P
Sbjct: 119 RIMESGALGCEVVVSGKLTGSRARVQKFTEGYIKHAGEP 157
>gi|390960788|ref|YP_006424622.1| 30S ribosomal protein S3 [Thermococcus sp. CL1]
gi|390519096|gb|AFL94828.1| 30S ribosomal protein S3P [Thermococcus sp. CL1]
Length = 210
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAKLK 172
>gi|312137081|ref|YP_004004418.1| 30S ribosomal protein S3 [Methanothermus fervidus DSM 2088]
gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088]
Length = 217
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 106/188 (56%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+++F+A+ + AE++E L +EL GY G+++++TP+ T I I A R V+G GR +R
Sbjct: 3 EKEFIAESLKRAEIDEFLEKELERAGYGGMDIQLTPLGTMITIYAERPGLVIGRGGRTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT++++KRF +E+ +V L A + L G+ RR YG LR IM
Sbjct: 63 RLTNILRKRFGLDNPQIEVKEVEVPE--LNPKIMAHRIASMLERGMHFRRVAYGTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G E+ +SGK+R RA S+KF +G++ G+P +++ + L+ L +
Sbjct: 121 AAGAQGAEITISGKIRGARATSVKFTEGHIKKCGEPAEKFVKTGFATAQLKPGVLGVHVK 180
Query: 188 ISVPVIVL 195
I P + L
Sbjct: 181 IMPPGVKL 188
>gi|432332005|ref|YP_007250148.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
gi|432138714|gb|AGB03641.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
Length = 231
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 108/184 (58%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+GV A + + L++EL GY G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGVRKARVEKYLSKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + +E+ ++VNN A AE L L G R+A +LR +M
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVNNPSFNAQIMAERLANALERGWYFRKAGTSILRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+SGA GCEV+++GKL RA++ KF +GY+ G+P N ++ V ++++ +I V +
Sbjct: 122 DSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGY-AVAVKKLGVIGVQV 180
Query: 188 ISVP 191
VP
Sbjct: 181 KLVP 184
>gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3 [Pyrococcus horikoshii OT3]
gi|6647791|sp|O59424.1|RS3_PYRHO RecName: Full=30S ribosomal protein S3
gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus
horikoshii OT3]
Length = 210
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|341582057|ref|YP_004762549.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
gi|340809715|gb|AEK72872.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
Length = 210
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKENVRDMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERKFNLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
+GA+G E+ +SGKL +RAKS++F GY+ G P
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNP 157
>gi|409096178|ref|ZP_11216202.1| 30S ribosomal protein S3P [Thermococcus zilligii AN1]
Length = 209
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GR+IR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAADPGYVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V++++F +E+ E++ N L A QA L L G+ RRA Y + IM
Sbjct: 64 DLTRVLERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIGAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + +L+
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAVLK 172
>gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3 [Methanosarcina acetivorans C2A]
gi|27734505|sp|Q8TRU1.1|RS3_METAC RecName: Full=30S ribosomal protein S3
gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A]
Length = 318
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L+ GY G+E+ TP+ T+I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ EN ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVANKYSL-ENP-QIDAQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEG 165
>gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3 [Methanospirillum hungatei JF-1]
gi|121731027|sp|Q2FT39.1|RS3_METHJ RecName: Full=30S ribosomal protein S3
gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1]
Length = 237
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVADGV + L EL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVADGVRKVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT + + +E+ ++V+N L A AE L L G R+A LR IM
Sbjct: 64 TLTQDLATTYGVESPQIEV--QQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+SGA GCEV++SGKL R + KF +GY+ SG PVN +D V ++++ +I V +
Sbjct: 122 DSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYA-VAIKKLGVIGVQV 180
Query: 188 ISVP 191
+P
Sbjct: 181 RLIP 184
>gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
Length = 241
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R+FV DGV A + + L +EL GY G E+ TP+ T+I I A + V+G+ G+ +R
Sbjct: 4 ERRFVEDGVRAARVEKYLRKELKRAGYGGTEIVRTPLGTQITIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
E+TS +Q + +E+ ++V N A AE L L G R+A ++R IM
Sbjct: 64 EITSNLQNDYGIESPQIEV--QQVENPAFNAQIMAERLANSLERGWYFRKAGTSIIRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
ESGA GCEV++SGKL R++ KF +GY+ +G+P ++ + ++++ +I +
Sbjct: 122 ESGALGCEVVISGKLTGARSRVQKFTEGYIKHAGEPSETIVEHGF-AIAIKKLGVIGCQV 180
Query: 188 ISVP 191
VP
Sbjct: 181 KIVP 184
>gi|410812263|gb|AFV81473.1| 40S ribosomal protein S3, partial [Scrobicularia plana]
Length = 113
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 58/70 (82%)
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVS 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQ
Sbjct: 1 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGV 60
Query: 182 LIFVMLISVP 191
L + I +P
Sbjct: 61 LGIKVKIMLP 70
>gi|452210667|ref|YP_007490781.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
gi|452100569|gb|AGF97509.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
Length = 307
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ EN ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVATKYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEG 165
>gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3 [Methanosarcina mazei Go1]
gi|27734502|sp|Q8PV44.1|RS3_METMA RecName: Full=30S ribosomal protein S3
gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1]
Length = 307
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ EN ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVATKYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEG 165
>gi|397780850|ref|YP_006545323.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
gi|396939352|emb|CCJ36607.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
Length = 234
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KF+++GV + + LT+EL GY G+++ TP+ T+I I A + V+G+ G+++R
Sbjct: 4 EKKFISEGVRNVRVEKFLTKELKRAGYGGMDITRTPLGTQITIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F VE+ ++V N A AE L L G R+A +R +M
Sbjct: 64 QLTQDLATHFGIESPQVEV--QQVQNPNFSAQIMAERLANALERGWYFRKAGQSTIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
ESGA GCEVIV+GKL R+++ KF +GY+ SG+P ++ + ++++ I V +
Sbjct: 122 ESGALGCEVIVAGKLTGARSRTQKFTEGYVKHSGEPSETIVEKGY-ALAVKKLGTIGVQV 180
Query: 188 ISVP 191
VP
Sbjct: 181 KIVP 184
>gi|294880038|ref|XP_002768878.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871826|gb|EER01596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 106
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 57/60 (95%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
>gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3 [Methanocaldococcus jannaschii DSM 2661]
gi|1710763|sp|P54034.1|RS3_METJA RecName: Full=30S ribosomal protein S3
gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM
2661]
Length = 208
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL++ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSKAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GAKG VI+SGKL +RA++ KF GYM G+P E +D
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKG 164
>gi|355571377|ref|ZP_09042629.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
gi|354825765|gb|EHF09987.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
Length = 239
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 107/184 (58%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+G A + + L +EL GY G++++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGARRARVEKHLKKELKRAGYGGMDLQRTPLGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F +E+ ++V N A AE L L G R+A ++R +M
Sbjct: 64 QLTQDLATDFAVESPQIEV--QQVPNPNFNAQIMAERLANALERGWYFRKAGQSIIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
++GA GCEVI++GKL RA+ KF +GY+ SG+PVN ++ V ++++ +I V +
Sbjct: 122 DAGALGCEVIIAGKLTGARARVQKFTEGYIKHSGEPVNTIVEKGY-AVAVKKLGVIGVQV 180
Query: 188 ISVP 191
+P
Sbjct: 181 KIIP 184
>gi|448411351|ref|ZP_21575816.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
gi|445670539|gb|ELZ23138.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
Length = 319
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTELEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P +D V +++ + I
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDHGVGTAVMK-LGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VQVKIIP 184
>gi|336477155|ref|YP_004616296.1| 30S ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
gi|335930536|gb|AEH61077.1| ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
Length = 311
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 97/162 (59%), Gaps = 2/162 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A +NE ++L+ GY G+++ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMNEYFAKQLSRAGYGGMDLNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V N L A A L + G R+A + +R IM
Sbjct: 64 KLTREVDRMYNL--DNPQIDAQEVKNPALNAQIMASRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+GA GCE+++SGKL R++ K +GY+ +G+PV++ +D
Sbjct: 122 GAGALGCEIVLSGKLTGSRSRVEKMVNGYIKHAGKPVDDIVD 163
>gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z]
gi|152060873|sp|A2SPK9.1|RS3_METLZ RecName: Full=30S ribosomal protein S3
gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z]
Length = 231
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFVADGV + + L +EL GY G+++ TPV T++ I A + V+G+ G+ +R
Sbjct: 4 EKKFVADGVRKVRVEQYLNKELKRAGYGGMDIVRTPVGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT+ + + VE+ ++V N L A AE L L G R+A V+R +M
Sbjct: 64 QLTTDLSTVYGIESPQVEV--QQVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+SGA GCEVI++GKL RA+ KF +GY+ SG+P ++ ++++ +I V +
Sbjct: 122 DSGALGCEVIIAGKLTGARARVQKFVEGYIKHSGEPSESIVEKGY-ATAIKKLGIIGVQV 180
Query: 188 ISVP 191
VP
Sbjct: 181 KIVP 184
>gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160]
gi|91207821|sp|Q3IMY2.1|RS3_NATPD RecName: Full=30S ribosomal protein S3
gi|76558928|emb|CAI50524.1| 30S ribosomal protein S3 [Natronomonas pharaonis DSM 2160]
Length = 305
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E + EL+ GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIHDGLQRTQIDEFFSEELSRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IMESGA G E+I+SGK+ R++ KF GY+ +G+P +DS V +++
Sbjct: 119 RIMESGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMK 172
>gi|344212407|ref|YP_004796727.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
gi|343783762|gb|AEM57739.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
Length = 304
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui]
Length = 304
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|296109315|ref|YP_003616264.1| 30S ribosomal protein S3 [methanocaldococcus infernus ME]
gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
Length = 211
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E +EL + GYS E++ TP+ T++ I A R V+G +G RI+
Sbjct: 3 ERIFIKENVKKVLIDEFFKKELFKAGYSHCEIKKTPIGTKVTIYAERPGFVIGRRGSRIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ K FK +++ + V N L A AE + L G+ RR + +R +M
Sbjct: 63 ELTEILAKEFKLDRPQIDV--KPVENPDLDAQVVAEKIARALERGMHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GAKG VI+SGKL +RA++ KF GYM G+P + +D R + L + +I V +
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGEPAEDLVDKG-RAIALTKPGVIGVTV 179
>gi|9967236|dbj|BAB12320.1| hypothetical protein [Macaca fascicularis]
Length = 83
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
+II ATRT+N+LGEKGR IRELT+VVQK F FPE SVELYA+KV RG IAQAESLRY
Sbjct: 1 MIILATRTENILGEKGRWIRELTAVVQKTFGFPEGSVELYADKVATRGR-DIAQAESLRY 59
Query: 108 KLLGGLAVRRAC 119
K LGGLAVRRA
Sbjct: 60 KFLGGLAVRRAW 71
>gi|448671521|ref|ZP_21687426.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
gi|445764983|gb|EMA16123.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
Length = 305
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|448681469|ref|ZP_21691560.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
gi|445767339|gb|EMA18442.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
Length = 305
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|448630844|ref|ZP_21673299.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
gi|445755218|gb|EMA06608.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
Length = 304
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3 [Haloarcula marismortui ATCC 43049]
gi|448636981|ref|ZP_21675429.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|448648015|ref|ZP_21679493.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
gi|57015336|sp|P20281.2|RS3_HALMA RecName: Full=30S ribosomal protein S3; AltName: Full=HS1; AltName:
Full=HmaS3
gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
gi|445765287|gb|EMA16426.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|445775885|gb|EMA26880.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
Length = 304
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|448685266|ref|ZP_21693258.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
gi|445781877|gb|EMA32728.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
Length = 310
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|289193197|ref|YP_003459138.1| 30S ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
Length = 207
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL+ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSRAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTEKLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GAKG VI+SGKL +RA++ KF GYM G+P E +D
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKG 164
>gi|429961737|gb|ELA41282.1| hypothetical protein VICG_01655 [Vittaforma corneae ATCC 50505]
Length = 215
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RK++ +G+ AELNE+ + Y+G ++ +I I+ Q +GE ++ +
Sbjct: 7 RKYIQNGLIDAELNELFGKYFQAQIYAGSTIKHNQTPIKISIKVYNPQEAIGENKFKLLQ 66
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +++ +RF P N++++ EK+ +RGL AE LR L +R +++
Sbjct: 67 LQNMIGQRFDIPPNNIDIVFEKIADRGLEPAYHAEQLRLAFLQNKPYKRVINSIIKSSRA 126
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL---IFV 185
+GA+G + V+GKL+ QRAK++K+ DGY I SG +Y+ SA +Q ++ + V
Sbjct: 127 AGAQGVMIRVAGKLKGQRAKAIKYFDGYFIQSGMAAKDYVRSAKSQAKCKQGTIGVQVSV 186
Query: 186 MLISVP 191
ML P
Sbjct: 187 MLPYDP 192
>gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1]
gi|152060874|sp|A3CT03.1|RS3_METMJ RecName: Full=30S ribosomal protein S3
gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1]
Length = 234
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KF+ DGV + + LT+EL GY G+++ TP+ T++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + VE+ ++V N A AE L L G R+A +R IM
Sbjct: 64 QLTQDLATDYDIESPQVEV--QQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
ESGA GCEVIV+GKL R+++ KF +GY+ G+P +E I + ++++ I V +
Sbjct: 122 ESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEP-SETIVEKGYALAIKKLGTIGVQV 180
Query: 188 ISVP 191
VP
Sbjct: 181 KIVP 184
>gi|289597187|ref|YP_003483883.1| 30S ribosomal protein S3 [Aciduliprofundum boonei T469]
gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
Length = 237
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T II+ R V+G KG +I+
Sbjct: 3 ERKFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +Q+ F ++E+ ++ N L A A+ L L G RRA + LR IM
Sbjct: 63 ELTDKLQQDFGVENPTIEV--KESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV 164
E+GAKG ++I+SGKL RA++ KF DG + +G+PV
Sbjct: 121 EAGAKGAQIIISGKLTGDRARTEKFMDGTIKYNGKPV 157
>gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3 [Methanoregula boonei 6A8]
gi|171769709|sp|A7I5P5.1|RS3_METB6 RecName: Full=30S ribosomal protein S3
gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8]
Length = 231
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+G A + + LT+EL G+ G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGARKARVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + +E+ ++V N A AE L L G R+A ++R +M
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+SGA GCEV+++GKL RA++ KF +GY+ G+P N ++ + ++++ +I V +
Sbjct: 122 DSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGY-AIAIKKLGVIGVQV 180
Query: 188 ISVP 191
VP
Sbjct: 181 KIVP 184
>gi|448475304|ref|ZP_21603022.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
gi|445816775|gb|EMA66662.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
Length = 313
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEDRFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
Length = 275
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKSKFNLENPQVEV--KEVDVPELNPRIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ L +
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSTKHVKEGFATVQLKPGVLGVYVR 180
Query: 188 ISVPVIVL 195
I P +VL
Sbjct: 181 IMPPEVVL 188
>gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
Length = 317
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNARIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IME+GAKG E+++SGK+ R++ KF GY+ +G+P +DS V +++
Sbjct: 119 RIMEAGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDSGVGVAVMK 172
>gi|448508622|ref|ZP_21615573.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|448517695|ref|ZP_21617269.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
gi|445697248|gb|ELZ49318.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|445705910|gb|ELZ57798.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
Length = 314
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|448426501|ref|ZP_21583350.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|448452129|ref|ZP_21593149.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|448484340|ref|ZP_21606047.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
gi|445679381|gb|ELZ31848.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|445809773|gb|EMA59811.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|445820115|gb|EMA69944.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
Length = 314
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|452206442|ref|YP_007486564.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
gi|452082542|emb|CCQ35800.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
Length = 301
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL+ GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRTQIDEFFAEELSRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEDFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IM+SGA G E+I+SGK+ R++ KF GY+ +G+P +DS V +++
Sbjct: 119 RIMDSGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAETIVDSGVGTAVMK 172
>gi|448503706|ref|ZP_21613335.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
gi|445691907|gb|ELZ44090.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
Length = 312
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|333910788|ref|YP_004484521.1| 30S ribosomal protein S3 [Methanotorris igneus Kol 5]
gi|333751377|gb|AEF96456.1| ribosomal protein S3 [Methanotorris igneus Kol 5]
Length = 209
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E + LA+ GYS +E+R TP+ T+I I A + V+G KG+R++
Sbjct: 3 ERVFVEESIKEMLIDEYFKKTLAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRKGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++K +K N ++ + + + L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLEKTYKV--NKPQIEVKPIEDPNLDPEVVAQKIATSLERGMHFRRVAHAAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GAKG VI+SGKL +RA++ KF GYM G P + A + L+ + +
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTVK 180
Query: 188 ISVPVIVL 195
I P IVL
Sbjct: 181 IMPPDIVL 188
>gi|261402351|ref|YP_003246575.1| 30S ribosomal protein S3 [Methanocaldococcus vulcanius M7]
gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
Length = 206
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E +EL+ GYS +R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKEHIKEFLIDEYFKKELSRAGYSHCYIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGMHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GAKG VI+SGKL +RA++ KF GYM G+P E +D
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKG 164
>gi|448460071|ref|ZP_21596991.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
gi|445807789|gb|EMA57870.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
Length = 314
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT]
gi|121694870|sp|A0B9W4.1|RS3_METTP RecName: Full=30S ribosomal protein S3
gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT]
Length = 276
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E L +EL GY G+ + TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGFTKALVDEYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT +++RF+ ++ ++ + V L A A L L G R+A +LR +M
Sbjct: 64 KLTRDLERRFRL--DNPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+SGA GCE+++SGKL R++ KF GY+ SG+P E +D+
Sbjct: 122 DSGALGCEIVISGKLTGPRSRVEKFLAGYIKHSGKPAEEIVDTG 165
>gi|448535702|ref|ZP_21622222.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
gi|445703203|gb|ELZ55138.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
Length = 312
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|448489446|ref|ZP_21607669.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
gi|445694818|gb|ELZ46936.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
Length = 313
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|448436258|ref|ZP_21587059.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
gi|445682926|gb|ELZ35336.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
Length = 312
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
Length = 307
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+ KFV DG A L+E ++L GY G+E+ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 ENKFVTDGYVKASLDEYFAKQLNRAGYGGMEINRTPMGTQITIYAEKPGMVIGKGGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V K + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDVDKLYNM--DNPQIDAQEVKTPELNAQMMATRLAASIERGWYFRKAGHNAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA GCE+I+SGKL RA+ K GY+ +G+PV++ +D
Sbjct: 122 GAGALGCEIIMSGKLTGPRARVEKLVRGYIKHAGKPVDDIVDEG 165
>gi|374635645|ref|ZP_09707239.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
gi|373561498|gb|EHP87731.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
Length = 208
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV D + ++E + LA+ GYS +E+R TP+ T+I I A + V+G +G+R++
Sbjct: 3 ERIFVDDNIKEMLIDEYFKKALAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRRGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ +K + +E+ + +++ L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLENTYKVDKPQIEVKS--IDDPNLDPEVVAQKIASSLERGMHFRRVAHAAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GAKG VI+SGKL +RA++ KF GYM G P + A + L+ + +
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTVK 180
Query: 188 ISVPVIVL 195
I P IVL
Sbjct: 181 IMPPDIVL 188
>gi|448463236|ref|ZP_21598014.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
gi|445817231|gb|EMA67107.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
Length = 312
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|152060913|sp|A1RXG6.2|RS3_THEPD RecName: Full=30S ribosomal protein S3
Length = 202
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
+ RK ++ G+ + LNE L R+L Y + TP+ T++I+ A V+G KG
Sbjct: 3 TTARKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGAN 62
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
I+ + V+++ F +++ +V N+ L A A + L+ G+ RRA L
Sbjct: 63 IKAIAEVLEREFGIENPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNR 120
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IM +GA+G E+++SGKL +QR ++ KF GY+ SG+P E +D A+ HVLL+
Sbjct: 121 IMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLK 173
>gi|448441443|ref|ZP_21589106.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
gi|445688852|gb|ELZ41099.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
Length = 312
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|297619583|ref|YP_003707688.1| 30S ribosomal protein S3 [Methanococcus voltae A3]
gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3]
Length = 218
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V A +NE ++L + GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVTNNVSEALINEYFCKKLVKAGYSHIDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ +K +E+ +++ N L + L G+ R+ + +R +M
Sbjct: 63 ELTETLRTVYKIENPQIEV--KQIENADLDPAVVGHKIAASLEKGMHFRKTAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 168
+GAKG +IVSGKL +R+++ KF DGYM G+P E +
Sbjct: 121 NAGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPSEELV 161
>gi|222480851|ref|YP_002567088.1| 30S ribosomal protein S3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
Length = 312
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|256810641|ref|YP_003128010.1| 30S ribosomal protein S3 [Methanocaldococcus fervens AG86]
gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
Length = 207
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + ++E +EL+ GYS ++R TP+ T+I I A + V+G +G RIR
Sbjct: 3 ERTFVKENTTKLLIDEYFKKELSRAGYSHCDIRKTPIGTKITIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTKTLAEEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GAKG VI+SGKL +RA++ KF GYM G+P E +D
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKG 164
>gi|410722176|ref|ZP_11361485.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
gi|410597412|gb|EKQ52031.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
Length = 274
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ ++ VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 AITQNLKNNYELENPQVEV--KEVDIPELNPKIMAHKISAMLQRGMHFRRVAYSALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ KF DGY+ G+P +Y+ L+ L +
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISVR 180
Query: 188 ISVPVIVL 195
I P +VL
Sbjct: 181 IMPPDVVL 188
>gi|395644922|ref|ZP_10432782.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
gi|395441662|gb|EJG06419.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
Length = 236
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV++GV + E L+REL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVSEGVTRVRVEEYLSRELKRAGYGGMDIVRTPMGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F VE+ ++V N + A AE L L G R+A +R +M
Sbjct: 64 QLTQDLSTNFNLESPQVEV--QQVANPSVNAQIMAERLATALERGWYFRKAGQSTMRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
ESGA GCE+++SGKL R++ KF +GY+ G+P ++ + ++++ +I V +
Sbjct: 122 ESGALGCEIVLSGKLTGARSRVQKFLEGYVKHCGEPSITIVEKGY-AIAIKKLGIIGVQV 180
Query: 188 ISVP 191
+P
Sbjct: 181 KIIP 184
>gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
gi|121687004|sp|Q12ZU5.1|RS3_METBU RecName: Full=30S ribosomal protein S3
gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
Length = 304
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E ++L+ GY G+++ TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMDEYFAKQLSRAGYGGMDINRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVDRLYDL--DNPQIDAQEVKRPELNAQMMASRLASSIERGWYFRKAGHNTMRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA GCE+++SGKL R++ K +GY+ +G+PV++ +D
Sbjct: 122 NAGALGCEIVISGKLTGSRSRVEKMVNGYIKHAGKPVDDIVDDG 165
>gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
Length = 314
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A L+E +L+ GY G+E+ TP+ T+I++ + + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFVKASLDEYFANQLSRAGYGGMEINRTPMGTQIVVYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDVGRLYNL--DNPQIDAQEVKRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
SGA GCE+I+SGK+ R++ K +GY+ +G+PV++ +D
Sbjct: 122 NSGALGCEIILSGKVTGARSRVEKMVNGYIKHAGKPVDDIVDEG 165
>gi|448726788|ref|ZP_21709180.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
gi|445793834|gb|EMA44405.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
Length = 370
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E ELA GY G+++ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P E +D
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQEIVD 163
>gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6094177|sp|O26116.1|RS3_METTH RecName: Full=30S ribosomal protein S3
gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 258
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKNKFDLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ L +
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVR 180
Query: 188 ISVPVIVL 195
I P +VL
Sbjct: 181 IMPPDVVL 188
>gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940]
gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADELQFIQDGIQRTQIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P + +D + V + ++ I
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|429190338|ref|YP_007176016.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|448326250|ref|ZP_21515617.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
gi|429134556|gb|AFZ71567.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|445612907|gb|ELY66624.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
Length = 317
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEG 165
>gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP6]
gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP6]
Length = 278
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 2/165 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S ++KFVA+G+ A +NE L EL GY G+++ TP+ T+I + A + V+G+ G+
Sbjct: 1 MSVEKKFVAEGITKALVNEYLADELERAGYGGMQMNRTPMGTQITVYAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T + +RF ++ ++ + V L A L L G R+A ++R
Sbjct: 61 LIRKITRDLDRRFHL--DNPQIDVQDVGRGDLNGRVVANRLASSLERGWYFRKAGQSMMR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+M++GA GCE+++SGKL R+++ KF GY+ SG+P + +D
Sbjct: 119 RVMDAGALGCEIVISGKLTGPRSRTEKFIAGYIKHSGKPAIDLVD 163
>gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3 [Methanosphaerula palustris E1-9c]
gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c]
Length = 234
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+GV + L R+L GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGVRKVRVERFLLRDLKRAGYGGMDIARTPLGTQVTIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + +E+ ++V N A AE L L G R+A V+R +M
Sbjct: 64 QLTQDLATTYGIESPQIEV--QQVQNPNYNAQIMAERLANALERGWYFRKAGSNVVRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
ESGA GCEV++SGKL RA+ KF +GY+ SG+P
Sbjct: 122 ESGALGCEVVLSGKLTGARARVQKFTEGYIKHSGEP 157
>gi|335437506|ref|ZP_08560282.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|335438903|ref|ZP_08561634.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334890174|gb|EGM28448.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334895854|gb|EGM34017.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G+EV TP+ T+I++ A + V+G+ G+
Sbjct: 1 MADELQFIEDGLQRTQIDEFFEDELGRAGYGGMEVAKTPMGTQIVLEAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P + +D + V + ++ I
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|435848742|ref|YP_007310992.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
gi|433675010|gb|AGB39202.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
Length = 326
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IMESGA G E+++SGK+ R++ KF GY+ +GQP E +D +++
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEVVDHGQATAVMK 172
>gi|408381916|ref|ZP_11179463.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
gi|407815364|gb|EKF85949.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
Length = 426
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ ++ VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 AITQNLKNSYELENPQVEV--KEVDVPELNPKIMAHKISAMLQRGMHFRRVAYSALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ KF DGY+ G+P +Y+ L+ L +
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISVR 180
Query: 188 ISVPVIVL 195
I P +VL
Sbjct: 181 IMPPDVVL 188
>gi|386001179|ref|YP_005919478.1| 30S ribosomal protein S3 [Methanosaeta harundinacea 6Ac]
gi|357209235|gb|AET63855.1| 30S ribosomal protein S3P [Methanosaeta harundinacea 6Ac]
Length = 302
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E L++EL+ GY G+ + TP+ +I + A + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFTKALVHEYLSKELSRAGYGGMTMNRTPMGIQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + F+ ++ ++ + V L A A L L G R+A LR +M
Sbjct: 64 KLTRDLDRNFRL--DNPQIDVQDVGKAELNAQVVANRLASSLERGWYFRKAGQTTLRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
ESGA GCE+I+SGKL R++ KF GY+ SG+P E +D
Sbjct: 122 ESGALGCEIILSGKLTGPRSRVEKFLSGYVKHSGKPSQEIVDHG 165
>gi|448737868|ref|ZP_21719901.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
gi|445802830|gb|EMA53131.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
Length = 383
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 103/169 (60%), Gaps = 6/169 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ ++F+ DG+ +++E ELA GY G+++ TP+ T+I++RA + V+G
Sbjct: 1 MATE----QEFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIG 56
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ G+ IR++TS +++RF + +++ ++V+ L A A+ L L G R+A +
Sbjct: 57 KGGKNIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGH 114
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+ IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P + +D
Sbjct: 115 TTIDRIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQDIVD 163
>gi|448704122|ref|ZP_21700603.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
gi|445796511|gb|EMA47015.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
Length = 320
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMK 172
>gi|435852132|ref|YP_007313718.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
gi|433662762|gb|AGB50188.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
Length = 304
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A L+E ++L GY G+EV TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVHEGYVKASLDEYFAKQLNRAGYGGMEVNRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDIDRMYDL--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+GA GCE+++SGKL R++S K GY+ +G+P + +D
Sbjct: 122 NAGALGCEIVISGKLTGSRSRSEKIVQGYIKHAGKPAEDIVD 163
>gi|288560114|ref|YP_003423600.1| 30S ribosomal protein S3 [Methanobrevibacter ruminantium M1]
gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
Length = 251
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +I+ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLRRTRIDEYLEKELERAGYGGMEIQVTPLGTMVIVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ V L A A + L G+ RR Y +R IM
Sbjct: 63 AITQSLKTKFDLDNPQVEVKEVAVPE--LNARIMASKIANMLQRGMHFRRVAYSTIRKIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ KF +GY+ G+P ++ L+ L V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSAVAKFTEGYIKKCGEPATRFVTEGFATAPLKPGVLGIVVR 180
Query: 188 ISVP 191
I P
Sbjct: 181 IMPP 184
>gi|448578195|ref|ZP_21643630.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
gi|445726736|gb|ELZ78352.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
Length = 298
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448592785|ref|ZP_21651832.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
gi|445730811|gb|ELZ82398.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
Length = 300
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|432328995|ref|YP_007247139.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
gi|432135704|gb|AGB04973.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
Length = 239
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T I++ R V+G KG +I+
Sbjct: 3 ERKFVKESVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIVLEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +Q+ F ++E+ ++ +N L A A+ L L G RRA + LR IM
Sbjct: 63 ELTDRLQQDFGVENPTIEV--KESDNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV 164
E+GAKG ++I++GKL RA++ KF G + +G+PV
Sbjct: 121 EAGAKGAQIIIAGKLTGDRARTEKFMAGTIKYNGKPV 157
>gi|383625039|ref|ZP_09949445.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|448697495|ref|ZP_21698535.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|445781448|gb|EMA32304.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
Length = 318
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMK 172
>gi|336252434|ref|YP_004595541.1| 30S ribosomal protein S3 [Halopiger xanaduensis SH-6]
gi|335336423|gb|AEH35662.1| ribosomal protein S3 [Halopiger xanaduensis SH-6]
Length = 320
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G+EV TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQATAVMK 172
>gi|350588289|ref|XP_003357250.2| PREDICTED: hypothetical protein LOC100627821 [Sus scrofa]
Length = 203
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 51/57 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEII+ ATR Q+
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIMLATRNQS 57
>gi|354477339|ref|XP_003500878.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 152
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VLRF MESGA+GCEV+VSGKLR +RAKSMK DG MI SG PVN Y+D+A+RHVLLRQ
Sbjct: 31 VLRFTMESGAEGCEVVVSGKLRGERAKSMKLVDGLMIHSGDPVNYYVDTAIRHVLLRQ 88
>gi|170060068|ref|XP_001865639.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167878646|gb|EDS42029.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 179
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 69/150 (46%), Gaps = 46/150 (30%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
FF + LAEDG SGVEVRVTP RTE II A+ + RIREL +V+
Sbjct: 20 FFLRSGSSFSAWLAEDGLSGVEVRVTPTRTEFIIMASAPRTCSARSDHRIRELNAVI--- 76
Query: 77 FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
YGVLRFIMES AKG EV
Sbjct: 77 -------------------------------------------YGVLRFIMESCAKGYEV 93
Query: 137 IVSGKLRAQRAKSMKFKDGYMISSGQPVNE 166
+VSGKLR QRAKSM F DG MI S P E
Sbjct: 94 VVSGKLRGQRAKSMTFVDGMMIHSDDPCKE 123
>gi|448350187|ref|ZP_21539006.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
gi|445637694|gb|ELY90842.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
Length = 328
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448362298|ref|ZP_21550909.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
gi|445648819|gb|ELZ01767.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
Length = 326
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|433638927|ref|YP_007284687.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
gi|433290731|gb|AGB16554.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
Length = 314
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IM++GA G E+++SGK+ R++ KF GY+ +G+P +E +D
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHG 165
>gi|448369933|ref|ZP_21556386.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
gi|445650373|gb|ELZ03297.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
Length = 328
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|409731018|ref|ZP_11272568.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|448724776|ref|ZP_21707281.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|445784985|gb|EMA35781.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
Length = 366
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+E+ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFAEELGRAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
IM++GA+G E+ ++GK+ R++ KF GY+ +G+P + +D
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRDEKFNRGYIKHNGEPSKDIVD 163
>gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3 [Pyrococcus furiosus DSM 3638]
gi|397652533|ref|YP_006493114.1| 30S ribosomal protein S3 [Pyrococcus furiosus COM1]
gi|27734507|sp|Q8U004.1|RS3_PYRFU RecName: Full=30S ribosomal protein S3
gi|428697931|pdb|3J20|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
gi|393190124|gb|AFN04822.1| 30S ribosomal protein S3P [Pyrococcus furiosus COM1]
Length = 210
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +E+ E++ N L A QA L L G+ RRA Y LR IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
Length = 292
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV DG A ++E +L GY G+++ TP+ T+I IRA + ++G+ G+ IR+
Sbjct: 5 KKFVQDGFKKAMIDEFFLEKLERAGYGGMDINRTPMGTQITIRAEKPGMIIGKSGKMIRK 64
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
T + RFK ++ ++ ++V L A A L L G R+A L+ IM+
Sbjct: 65 FTKDLDVRFKM--DNPQIDVQEVKRPELNAQMMATRLANALERGWYFRKAGQSTLQRIMD 122
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
SGA G E++++GKL R ++ KF GY+ G+PV E++D
Sbjct: 123 SGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEEFVD 163
>gi|313125796|ref|YP_004036066.1| 30S ribosomal protein S3 [Halogeometricum borinquense DSM 11551]
gi|448285635|ref|ZP_21476876.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|445576271|gb|ELY30728.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
Length = 310
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTKALETRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3 [Thermococcus onnurineus NA1]
gi|254764554|sp|B6YSL9.1|RS3_THEON RecName: Full=30S ribosomal protein S3
gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1]
Length = 208
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVREMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 RNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|399577352|ref|ZP_10771105.1| rps3 protein [Halogranum salarium B-1]
gi|399237735|gb|EJN58666.1| rps3 protein [Halogranum salarium B-1]
Length = 309
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +Q+RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITRELQERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E++++GK+ R++ KF GY+ +G+P + +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLAGKVTGARSRIEKFNRGYIKHNGEPADTVVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448323157|ref|ZP_21512621.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
gi|445600343|gb|ELY54356.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
Length = 313
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IM+SGA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG 165
>gi|410670345|ref|YP_006922716.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
gi|409169473|gb|AFV23348.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
Length = 310
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 95/162 (58%), Gaps = 2/162 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E ++L + GY G+E+ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGYVKASMDEYFAKQLNKAGYGGMELNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDIDRMYDI--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRKAGHNTIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+GA GCE+++SGKL R++ K GY+ +G+PV++ +D
Sbjct: 122 NAGALGCEIVISGKLTGARSRVEKIVQGYIKHAGKPVDDIVD 163
>gi|448352603|ref|ZP_21541385.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
gi|445642165|gb|ELY95235.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
Length = 330
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEG 165
>gi|284165498|ref|YP_003403777.1| 30S ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
Length = 317
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG 165
>gi|433420031|ref|ZP_20405417.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
gi|432199288|gb|ELK55479.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
Length = 303
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|345005649|ref|YP_004808502.1| 30S ribosomal protein S3 [halophilic archaeon DL31]
gi|344321275|gb|AEN06129.1| ribosomal protein S3 [halophilic archaeon DL31]
Length = 312
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ ++KF+ DG+ ++++E EL GY G+++ TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQKFIEDGLQRSQIDEFFADELGRAGYGGMDIAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR+++S +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVSSELEERFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+ME+GA G E+++SGK+ R++ KF GY+ +G+P +D
Sbjct: 119 RMMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTVVDEG 165
>gi|448569076|ref|ZP_21638488.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|448600505|ref|ZP_21656001.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
gi|445725226|gb|ELZ76851.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|445735222|gb|ELZ86774.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
Length = 303
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2]
gi|448290683|ref|ZP_21481829.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2]
gi|445578054|gb|ELY32469.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
Length = 304
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|289579904|ref|YP_003478370.1| 30S ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|448281144|ref|ZP_21472452.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|445579468|gb|ELY33862.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
Length = 335
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEG 165
>gi|448377812|ref|ZP_21560508.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
gi|445655756|gb|ELZ08601.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
Length = 314
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P +E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|448399316|ref|ZP_21570618.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
gi|445669223|gb|ELZ21836.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
Length = 310
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|354610531|ref|ZP_09028487.1| ribosomal protein S3 [Halobacterium sp. DL1]
gi|353195351|gb|EHB60853.1| ribosomal protein S3 [Halobacterium sp. DL1]
Length = 323
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADEMQFIEQGLQRSQIDEFFATELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R + KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHG-KGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VSVKIIP 184
>gi|448611741|ref|ZP_21662171.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
gi|445742502|gb|ELZ93996.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
Length = 299
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448358810|ref|ZP_21547484.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
gi|445644490|gb|ELY97503.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
Length = 329
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEG 165
>gi|448606201|ref|ZP_21658780.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445739618|gb|ELZ91125.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
Length = 302
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448583476|ref|ZP_21646832.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
gi|445729705|gb|ELZ81300.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
Length = 302
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448565521|ref|ZP_21636388.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
gi|445715265|gb|ELZ67021.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
Length = 303
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448545980|ref|ZP_21626307.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|448548054|ref|ZP_21627398.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|448557077|ref|ZP_21632512.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
gi|445703326|gb|ELZ55257.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|445714756|gb|ELZ66514.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|445714946|gb|ELZ66703.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
Length = 302
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448311974|ref|ZP_21501727.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603595|gb|ELY57557.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
Length = 315
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEQFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG 165
>gi|389848011|ref|YP_006350250.1| 30S ribosomal protein S3 [Haloferax mediterranei ATCC 33500]
gi|448618108|ref|ZP_21666453.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|388245317|gb|AFK20263.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|445747663|gb|ELZ99118.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
Length = 300
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448623086|ref|ZP_21669735.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
gi|445753594|gb|EMA05011.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
Length = 303
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|448345591|ref|ZP_21534480.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
gi|445633524|gb|ELY86711.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
Length = 312
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|397773837|ref|YP_006541383.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|448341384|ref|ZP_21530345.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
gi|397682930|gb|AFO57307.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|445628066|gb|ELY81377.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
Length = 312
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|448338128|ref|ZP_21527180.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
gi|445623303|gb|ELY76725.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
Length = 314
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3 [Halobacterium sp. NRC-1]
gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1]
gi|21264507|sp|P15009.3|RS3_HALSA RecName: Full=30S ribosomal protein S3; AltName: Full=HHAS3;
AltName: Full=HS4
gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum]
gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|167727443|emb|CAP14231.1| 30S ribosomal protein S3 [Halobacterium salinarum R1]
Length = 302
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVEEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IMESGA G E+++SGK+ R + KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMESGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHG-KGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|337283650|ref|YP_004623124.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
gi|334899584|gb|AEH23852.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
Length = 210
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT V++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRVLERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|83595153|gb|ABC25034.1| ribosomal protein S3 [Hydra vulgaris]
Length = 119
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
I+ESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P+ EYID+AVRHV LRQ
Sbjct: 6 ILESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQ 59
>gi|386869506|ref|NP_001247436.1| 40S ribosomal protein S3 isoform 3 [Homo sapiens]
gi|426369805|ref|XP_004051874.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Gorilla gorilla
gorilla]
gi|426369807|ref|XP_004051875.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Gorilla gorilla
gorilla]
gi|426369811|ref|XP_004051877.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Gorilla gorilla
gorilla]
gi|426369815|ref|XP_004051879.1| PREDICTED: 40S ribosomal protein S3 isoform 6 [Gorilla gorilla
gorilla]
gi|21104402|dbj|BAB93471.1| IMR-90 ribosomal protein S3 [Homo sapiens]
Length = 117
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 47/53 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 53
>gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
Length = 320
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T + +RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITRELGERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM+SGA G E+++SGK+ R++ KF GY+ +G+P +D + V + ++ I
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTIVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VDVKIIP 184
>gi|448392355|ref|ZP_21567129.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
gi|445664445|gb|ELZ17154.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
Length = 318
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG 165
>gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
gi|121729293|sp|Q2NFW2.1|RS3_METST RecName: Full=30S ribosomal protein S3
gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
Length = 252
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G++++VTPV T +I+ A + V+G G+ +R
Sbjct: 3 EKDFVKEGLKRTRIDEYLETKLERAGYGGMDIQVTPVGTMVIVYAEKPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ F VE+ ++V+ L A + L G+ RR Y ++R IM
Sbjct: 63 AITKTLKNNFDLENPQVEV--KEVDVPELNPRIMAHKVVAMLQRGMQFRRVAYSIIRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ KF +GY+ G+P +Y+ V L+ L +
Sbjct: 121 SAGAQGVEVTISGKIRGSRSACAKFNEGYIKKCGEPSIKYVKEGFATVQLKPGVLGIYVR 180
Query: 188 ISVPVIVL 195
I P + L
Sbjct: 181 IMPPEVTL 188
>gi|448298471|ref|ZP_21488500.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
gi|445591667|gb|ELY45868.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
Length = 323
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG 165
>gi|149068840|gb|EDM18392.1| rCG40478, isoform CRA_b [Rattus norvegicus]
gi|344246127|gb|EGW02231.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 117
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 47/53 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 53
>gi|383319759|ref|YP_005380600.1| 30S ribosomal protein S3 [Methanocella conradii HZ254]
gi|379321129|gb|AFD00082.1| SSU ribosomal protein S3P [Methanocella conradii HZ254]
Length = 280
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+I I+A + ++G+ G+ IR
Sbjct: 4 EKKFVQDGFKKAMIDEFFLEKLERAGYGGMEINRTPMGTQITIKAEKPGMIIGKSGKMIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+ T + RFK ++ ++ ++V L A A L L G R+A L+ IM
Sbjct: 64 KFTRDLDVRFKM--DNPQIDVQEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
++GA G E++++GKL R ++ KF GY+ G+PV ++ID
Sbjct: 122 DAGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEQFID 163
>gi|448309700|ref|ZP_21499556.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
gi|445589557|gb|ELY43787.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
Length = 308
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3 [Sulfolobus solfataricus P2]
gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2]
gi|384434231|ref|YP_005643589.1| 30S ribosomal protein S3 [Sulfolobus solfataricus 98/2]
gi|11134364|sp|Q9UXA0.1|RS3_SULSO RecName: Full=30S ribosomal protein S3
gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2]
gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2]
gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2]
Length = 229
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L ++ Y+GVEV TP+ T +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L + +K F EN ++ V N L A A L L G RRA + +R IM
Sbjct: 65 QLAQIFEKVFGL-ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA G E+I+SGKL +RA+ K K+G + SGQ + + ID A+ +L+
Sbjct: 123 NAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLK 173
>gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3 [Sulfolobus acidocaldarius DSM 639]
gi|449066618|ref|YP_007433700.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449068892|ref|YP_007435973.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363394|sp|Q4JB46.1|RS3_SULAC RecName: Full=30S ribosomal protein S3
gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
gi|449035126|gb|AGE70552.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449037400|gb|AGE72825.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
Length = 231
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L V++K F + + A N L A A L L G RRA + +R IM
Sbjct: 65 QLAQVLEKFFGLENPQITVTA--AENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
SGA G EVIVSGKL ++RAK K K+G + SGQ + + ID A+ +L+
Sbjct: 123 SSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLK 173
>gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
gi|171460867|sp|A6UWU3.1|RS3_META3 RecName: Full=30S ribosomal protein S3
gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
Length = 208
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +L GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIKENVMETLVDEYLKNKLPRAGYSHMDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + ++ N ++ +++ + L A A+ + L G+ RR + +R +M
Sbjct: 63 ELTETIATKYGV--NKPQIEVKQIESPDLDAGVVAQKIASSLERGMHFRRVAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
GAKG VIVSGKL +R+++ K+ +GYM G+P E +D
Sbjct: 121 AQGAKGVVVIVSGKLTGERSRTEKYMEGYMKHCGEPSEELVD 162
>gi|149068842|gb|EDM18394.1| rCG40478, isoform CRA_d [Rattus norvegicus]
Length = 151
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 47/53 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 53
>gi|448302872|ref|ZP_21492822.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593879|gb|ELY48046.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
Length = 313
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ +F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|448315118|ref|ZP_21504771.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
gi|445612377|gb|ELY66103.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
Length = 295
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IM+SGA G E+++SGK+ R++ KF GY+ +G+P E +D
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG 165
>gi|448730383|ref|ZP_21712691.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
gi|445793551|gb|EMA44123.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
Length = 372
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 98/165 (59%), Gaps = 2/165 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+E+ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P +D
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVD 163
>gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|448294705|ref|ZP_21484784.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|445586382|gb|ELY40664.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
Length = 302
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGMQRSQIDEFFATELERAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
IM++GA G E+++SGK+ R++ KF GY+ +G+P + +D + +++
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEDIVDKGLGTAVMK 172
>gi|156937383|ref|YP_001435179.1| 30S ribosomal protein S3 [Ignicoccus hospitalis KIN4/I]
gi|172044464|sp|A8AA20.1|RS3_IGNH4 RecName: Full=30S ribosomal protein S3
gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
Length = 241
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + +++E L + GYS VE++ TP+ T +II A R+ ++G +G+ I+
Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
++T V+++ F P V + KV L A A L L G RRA Y LR IM
Sbjct: 69 QITKVLEEWFGIPNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIM 126
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA G +V VSGKLR +RA+ K+ G + SG V D A+ HVLL+
Sbjct: 127 GAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLK 177
>gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
gi|121687826|sp|Q0W1Y3.1|RS3_UNCMA RecName: Full=30S ribosomal protein S3
gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
Length = 279
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E +L GY G+E+ TP+ T+I ++A + ++G+ G+ IR
Sbjct: 4 EKKFVQEGFKKAMVDEYFLEKLERAGYGGMEINRTPMGTQITLKAEKPGMIIGKAGKSIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
T + RFK ++ ++ ++V L A A L L G R+A L+ IM
Sbjct: 64 RYTKEMDMRFKM--DNPQIDVQEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+SGA GCEVI++GKL R + KF GY+ G+PV E +D
Sbjct: 122 DSGAMGCEVIIAGKLTGARKRREKFIAGYIKHCGKPVEELVD 163
>gi|218117273|emb|CAQ37764.1| 40S ribosomal protein S3 [Echinorhynchus truttae]
Length = 71
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 57 NVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
V+G+KGRRIREL+SVV KRF + L + KV RGLCA+ QAESLRYKL+ G+AVR
Sbjct: 1 QVVGDKGRRIRELSSVVAKRFNLKPEKLVLLSSKVEQRGLCAMTQAESLRYKLIEGVAVR 60
Query: 117 RACYGVLRFIM 127
RACYGV+RF+M
Sbjct: 61 RACYGVVRFVM 71
>gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790]
gi|385804235|ref|YP_005840635.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
gi|121689634|sp|Q18GF5.1|RS3_HALWD RecName: Full=30S ribosomal protein S3
gi|109626482|emb|CAJ52943.1| 30S ribosomal protein S3 [Haloquadratum walsbyi DSM 16790]
gi|339729727|emb|CCC41005.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
Length = 323
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEDRFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
I+ESGA G E+++SGK+ R++ KF GY+ +G+P E +D + V + ++ I
Sbjct: 119 RIIESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VTVKIIP 184
>gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5]
gi|189045017|sp|A4FWB6.1|RS3_METM5 RecName: Full=30S ribosomal protein S3
gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5]
Length = 211
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K + +E+ ++V N L + L G+ RR + +R +M
Sbjct: 63 ELTETLAKEYAVKNPQIEV--KQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ +
Sbjct: 121 GSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS 164
>gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21]
gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21]
Length = 299
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLENELERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ + VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 SITQNLKTGYGLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ KF DGY+ G+P ++ V L+ L +
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFSDGYIKKCGEPSIRFVRHGFATVQLKPGVLGINVR 180
Query: 188 ISVPVIVL 195
I P +VL
Sbjct: 181 IMPPDVVL 188
>gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
gi|259495260|sp|C6A165.1|RS3_THESM RecName: Full=30S ribosomal protein S3
gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
Length = 207
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +G+ ++E L +EL GY G++++ TP+ T+++I R V+G GR+IR
Sbjct: 4 ERYFIKEGIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++++RF +E+ E++ N A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERRFNLENPQIEV--EEIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 SNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLK 172
>gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5]
gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5]
Length = 187
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
LNE L R+L Y + TP+ T++I+ A V+G KG I+ + V+++ F
Sbjct: 3 LNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGIE 62
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+++ +V N+ L A A + L+ G+ RRA L IM +GA+G E+++SG
Sbjct: 63 NPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISG 120
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
KL +QR ++ KF GY+ SG+P E +D A+ HVLL+
Sbjct: 121 KLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLK 158
>gi|433590200|ref|YP_007279696.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|448332394|ref|ZP_21521638.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
gi|433304980|gb|AGB30792.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|445627498|gb|ELY80822.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
Length = 316
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHG 165
>gi|405948172|gb|EKC17931.1| 40S ribosomal protein S3, partial [Crassostrea gigas]
Length = 112
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQ L +
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKVK 60
Query: 188 ISVP 191
I +P
Sbjct: 61 IMLP 64
>gi|448386095|ref|ZP_21564303.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
gi|445655993|gb|ELZ08835.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
Length = 312
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHG 165
>gi|389853111|ref|YP_006355345.1| 30S ribosomal protein S3 [Pyrococcus sp. ST04]
gi|388250417|gb|AFK23270.1| rpsC, small subunit ribosomal protein S3 [Pyrococcus sp. ST04]
Length = 210
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT +++ +F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 QLTRILESQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|448329365|ref|ZP_21518665.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
gi|445614104|gb|ELY67785.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
Length = 322
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHG 165
>gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
Length = 210
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILEKQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|149068839|gb|EDM18391.1| rCG40478, isoform CRA_a [Rattus norvegicus]
Length = 55
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 47/53 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 53
>gi|448735129|ref|ZP_21717346.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
gi|445798742|gb|EMA49133.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
Length = 372
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 98/165 (59%), Gaps = 2/165 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+++ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P +D
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVD 163
>gi|305662597|ref|YP_003858885.1| 30S ribosomal protein S3 [Ignisphaera aggregans DSM 17230]
gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
Length = 209
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ K F+ G+ ++E L + GY+GV++ TP+ T +II A R ++G +G+
Sbjct: 2 VNIKNYFIEQGIKKVAVDEYLASKFWRAGYAGVDLIRTPLGTRVIIYAARPGLIIGRRGQ 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+R + V++K F EN ++ + N L A A ++ L G+ RRA + LR
Sbjct: 62 TLRTIQLVIEKLFGI-ENP-QITVVEAENPDLNARIVAFNIALALERGIHFRRAGFIALR 119
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
+M +GA GCE+++SGKL A+RA+ K K G + SG+ +D AV HVLL+
Sbjct: 120 RVMAAGAIGCEIVISGKLVAERARYEKLKMGKVYKSGEQSFRLVDRAVAHVLLKPGMYGI 179
Query: 185 VMLISVP 191
+LI+ P
Sbjct: 180 EVLITRP 186
>gi|333987673|ref|YP_004520280.1| 30S ribosomal protein S3 [Methanobacterium sp. SWAN-1]
gi|333825817|gb|AEG18479.1| ribosomal protein S3 [Methanobacterium sp. SWAN-1]
Length = 315
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLETQLERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ + EN ++ ++V L A + L G+ RR Y LR IM
Sbjct: 63 SITQNLKNDYGL-ENP-QVEVKEVEVPELNPKIMAHKIANMLQRGMHFRRVAYTALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ KF DGY+ G+P N+++ V L+ L +
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACSKFTDGYIKKCGEPANKHVRKGFATVQLKPGVLGIYVR 180
Query: 188 ISVPVIVL 195
I P I+L
Sbjct: 181 IMPPGILL 188
>gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
Length = 207
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|17367830|sp|Q9V1U1.1|RS3_PYRAB RecName: Full=30S ribosomal protein S3
gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|380741079|tpe|CCE69713.1| TPA: 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
Length = 210
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 SNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|429217541|ref|YP_007175531.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
gi|429134070|gb|AFZ71082.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
Length = 247
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + A+++E L + GYSGV + + + T I I A R ++G KG IR
Sbjct: 5 KKYFLDQAMLRAKIDEYLAQNFYTAGYSGVHIIQSGLGTRIHIYAERPALIIGRKGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L V QK F +V++ + +N L A QA + L G RR LR I+
Sbjct: 65 RLQGVFQKVFGL--ENVQVTVSQPDNTELDARIQAFRVARSLEMGYHFRRVAMATLRRII 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
E+GA G E+++SGKL +RAK K + G +I +G V++Y+D AV H L Q
Sbjct: 123 EAGAIGAEIVISGKLTNERAKFEKLQMGKVIKTGDIVDQYVDKAVAHAKLPQ 174
>gi|170052166|ref|XP_001862098.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167873123|gb|EDS36506.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 181
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 68/140 (48%), Gaps = 43/140 (30%)
Query: 52 ATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLG 111
RTQNVLGE RIREL ++ L+AEKV R LCAI QAESL YKL+G
Sbjct: 25 GPRTQNVLGESDHRIRELNAI-------------LFAEKVATRSLCAIVQAESLCYKLIG 71
Query: 112 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
GLAV RACYG F DG + S P NE+ D+A
Sbjct: 72 GLAVCRACYG------------------------------FVDGIIFHSDDPSNEFSDTA 101
Query: 172 VRHVLLRQVSLIFVMLISVP 191
RHVLLR L + I +P
Sbjct: 102 SRHVLLRHGELGMQVKIMLP 121
>gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061]
gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
gi|172048064|sp|A5UL83.1|RS3_METS3 RecName: Full=30S ribosomal protein S3
gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061]
gi|222434612|gb|EEE41777.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2375]
gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V++TP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELERAGYGGMDVQITPLGTMVVVYAERPGMVIGRGGKNVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T+ ++ F +E+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITNTLKNDFGLDNPQIEV--KEVSVPELNPKIMAYKIANMLQRGMHFRRVAYSTIRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA+G EV +SGK+R R+ KF +GY+ G+P ++ V L+ L +
Sbjct: 121 GAGAQGVEVTISGKIRGSRSAVAKFVEGYIKKCGEPSIRLVEEGFATVQLKPGVLGIYVR 180
Query: 188 ISVPVIVL 195
I P VL
Sbjct: 181 IMPPETVL 188
>gi|336121751|ref|YP_004576526.1| 30S ribosomal protein S3 [Methanothermococcus okinawensis IH1]
gi|334856272|gb|AEH06748.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
Length = 219
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E L +L GYS ++++ TPV T I + A + V+G KGR ++
Sbjct: 3 ERAFVKENVVETLVDEYLKNKLPRAGYSHMDIKKTPVGTRITVFAEKPGFVIGRKGRMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + ++ +E+ +++ N L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETIANKYGVENPQIEV--KQIQNPDLDPEVVAQKIASSLERGMHFRRVAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
+GAKG +I+SGKL +R+++ KF +GYM G+P
Sbjct: 121 GAGAKGIVIIISGKLTGERSRTEKFMEGYMKHCGEP 156
>gi|324105279|gb|ADY18402.1| ribosomal protein rps3 [Glycera tridactyla]
Length = 108
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P ++Y+D+AVRHVLLRQ L +
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTHDYVDTAVRHVLLRQGVLGIKVK 60
Query: 188 ISVP 191
I +P
Sbjct: 61 IMLP 64
>gi|375083288|ref|ZP_09730314.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
gi|374742019|gb|EHR78431.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
Length = 207
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + + ++E L +EL GY G++++ TP+ T+++I A R V+G GR+IR
Sbjct: 4 ERYFIKESIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFAERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYFNAKVQATRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+
Sbjct: 122 NNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLK 172
>gi|149064299|gb|EDM14502.1| rCG46746 [Rattus norvegicus]
Length = 77
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 53/64 (82%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK RK VA+G+F AELNE LT+ELAEDG+SGVEV VT RTEI I ATRTQ+VLGEKG
Sbjct: 2 QISKNRKSVAEGIFKAELNEFLTQELAEDGHSGVEVWVTLTRTEINISATRTQDVLGEKG 61
Query: 64 RRIR 67
IR
Sbjct: 62 HGIR 65
>gi|448415413|ref|ZP_21578213.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
gi|445681071|gb|ELZ33512.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
Length = 343
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTKELENRFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIF 184
IM++GA G E+I++GK+ R++ KF GY+ +G+P +D + V + ++ I
Sbjct: 119 RIMDAGALGAEIILAGKVTGARSRVEKFNRGYIKHNGEPAQSIVDEG-QGVAVMKLGTIG 177
Query: 185 VMLISVP 191
V + +P
Sbjct: 178 VNVKIIP 184
>gi|424812835|ref|ZP_18238075.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
gi|339757057|gb|EGQ40640.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
Length = 366
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 6/172 (3%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QI ++++FV G+ L++ L +EL GY+G + TP T+I+I A + ++G G
Sbjct: 17 QIVQEKQFVQQGIRRVNLDDFLAKELEGSGYAGSTIERTPTSTKIVITAEKPGLIIGRGG 76
Query: 64 RRIRELTSVVQKRFKFPENSVELY--AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
RIRELTS V+ F F + +E+ E +N + A AE L G + +R Y
Sbjct: 77 SRIRELTSDVEDEFGFEDPQIEVNEIEEPDSNAQVVANNMAEWLEK----GGSAKRVGYT 132
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
LR + E+G G ++ VSGKL R ++ KF GY+ G +E +D R
Sbjct: 133 YLRRVRETGVIGAQIEVSGKLSGNRGRTEKFSFGYVKRCGDTADEQVDRGYR 184
>gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2]
gi|340624714|ref|YP_004743167.1| 30S ribosomal protein S3 [Methanococcus maripaludis X1]
gi|61215571|sp|Q6LXE7.1|RS3_METMP RecName: Full=30S ribosomal protein S3
gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2]
gi|339904982|gb|AEK20424.1| 30S ribosomal protein S3P [Methanococcus maripaludis X1]
Length = 211
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++ + TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + +E+ ++V N L + L G+ R+ + +R +M
Sbjct: 63 ELTETLATEYSVKNPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ +
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS 164
>gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284997900|ref|YP_003419667.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|385773369|ref|YP_005645935.1| 30S ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
gi|385776007|ref|YP_005648575.1| 30S ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
Length = 216
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+++E L ++ Y+GVEV TP+ T +II A R ++G GR I++L + +K F
Sbjct: 4 KIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFGL 63
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
EN ++ V N L A A L L G RRA + +R IM +GA G E+I+S
Sbjct: 64 -ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIIS 121
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K K+G + SGQ + + ID A+ +L+
Sbjct: 122 GKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLK 160
>gi|242222173|ref|XP_002476815.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220723885|gb|EED77980.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 136
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 47/53 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQ
Sbjct: 1 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQ 53
>gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7]
gi|189045018|sp|A6VGZ0.1|RS3_METM7 RecName: Full=30S ribosomal protein S3
gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7]
Length = 211
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + N+ ++ ++V + L + L G+ R+ + +R +M
Sbjct: 63 ELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ +
Sbjct: 121 GSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS 164
>gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB]
gi|171460840|sp|A6UQ49.1|RS3_METVS RecName: Full=30S ribosomal protein S3
gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB]
Length = 211
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+A+ V ++E +L GYS +E++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIAENVSETLIDEYFKGKLVRAGYSHLELKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + +K +E+ + + L + L G+ R+ + +R +M
Sbjct: 63 ELTDTLTEVYKVENPQIEV--KPLETPDLDPAIVGHKIAASLEKGMHFRKTAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 168
+GAKG +I+SGKL +R+++ KF DGYM G+P E +
Sbjct: 121 AAGAKGVAIIISGKLSGERSRTEKFMDGYMKHCGEPAEELV 161
>gi|408404342|ref|YP_006862325.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364938|gb|AFU58668.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 222
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TPV I I TR V+G KG I++L + ++++F
Sbjct: 2 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 61
Query: 80 --PENSV-ELYAEKVNNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCE 135
P+ SV E+ ++N +C IAQ + G A RRA L IM +GA G E
Sbjct: 62 QNPQISVLEVTNPELNPHIMCNRIAQL------IERGTAFRRAAMWSLNTIMNAGALGVE 115
Query: 136 VIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
V++SGKLR +RA K G + SG + + + V HVL +
Sbjct: 116 VVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTK 158
>gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis]
Length = 236
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TPV I I TR V+G KG I++L + ++++F
Sbjct: 16 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 75
Query: 80 --PENSV-ELYAEKVNNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCE 135
P+ SV E+ ++N +C IAQ + G A RRA L IM +GA G E
Sbjct: 76 QNPQISVLEVTNPELNPHIMCNRIAQL------IERGTAFRRAAMWSLNTIMNAGALGVE 129
Query: 136 VIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
V++SGKLR +RA K G + SG + + + V HVL +
Sbjct: 130 VVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTK 172
>gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6]
gi|226697730|sp|A9A9Q9.1|RS3_METM6 RecName: Full=30S ribosomal protein S3
gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6]
Length = 211
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + N+ ++ ++V + L + L G+ R+ + +R +M
Sbjct: 63 ELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ +
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS 164
>gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7]
Length = 359
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV G+ A ++E +++L GY+G+++ TP+ T+I I A + V+G+ G+ +R
Sbjct: 4 ERKFVQQGLNRARMSEYFSKQLERAGYAGMQINRTPMGTQITIFAEKPGMVIGKGGKSVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LTS + + ++ ++ + V L A A + L G R+A + LR IM
Sbjct: 64 NLTSDLNNFYDL--DNPQIDVQGVGVPELNAQLMASRIASALERGWYFRKAAHSTLRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA GC +++SGKL R++ K +GY++ +G+P E + +
Sbjct: 122 GAGALGCRIVLSGKLTGPRSRIEKIVEGYIVHAGKPAEEIVHTG 165
>gi|332796534|ref|YP_004458034.1| 30S ribosomal protein S3 [Acidianus hospitalis W1]
gi|332694269|gb|AEE93736.1| ribosomal protein S3 [Acidianus hospitalis W1]
Length = 227
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L ++ Y+GV++ TP+ T III A R ++G+ G+ I++L V +K F
Sbjct: 18 LDEYLAKQFYNAEYAGVDIIKTPMGTRIIIYAGRPAMIIGKGGKTIKQLAQVFEKFFNL- 76
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
EN ++ V+N L A A L L G RRA + +R IM +GA G EV+VSG
Sbjct: 77 ENP-QITVTNVDNPELNARVMAFRLAVALEKGYHFRRAAFITIRRIMNAGALGAEVVVSG 135
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
K+ ++RAK K K+G + +G + ID AV L+
Sbjct: 136 KITSERAKYEKLKEGTVYKTGNSLETMIDRAVAIATLK 173
>gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
gi|27734524|sp|Q975I7.1|RS3_SULTO RecName: Full=30S ribosomal protein S3
gi|15621418|dbj|BAB65413.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
Length = 225
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 2/172 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I++L ++++ F
Sbjct: 18 VDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPALIIGKGGKTIKQLAQMLERYFGL- 76
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
++ ++ V N L A A L L G RRA + +R IM +GA G EVI+SG
Sbjct: 77 -DNPQITVTSVENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMNAGALGAEVIISG 135
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVPV 192
KL ++RAK K K+G + SG +++ +D AV +L+ +LI+ P+
Sbjct: 136 KLTSERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEILITKPM 187
>gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6]
gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6]
Length = 246
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 6/188 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV D + ++ E + +E+ G+ GV++ TP+ T++ + R V+G+ GRRIR
Sbjct: 4 ERKFVEDRIKKLKVKEWMIQEVRNAGFGGVDITRTPLGTQVTLFVERPGLVIGKGGRRIR 63
Query: 68 ELTSVVQK-RFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
LT +++ + P+ SV+ + N L A A +L G R+A Y L I
Sbjct: 64 ALTERLKEFGIENPQVSVDEIEKPEFNAQLMASLLARALER----GWYFRKAGYRFLYRI 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVM 186
ME+GAKGCE+ +SGKL ++RA++ KF G M+ +G+P + + + ++++ ++ V
Sbjct: 120 MEAGAKGCEIEISGKLTSERARTEKFLAGTMVHTGEPASSMVRKGF-DIAIKKLGVLGVT 178
Query: 187 LISVPVIV 194
+ +P V
Sbjct: 179 VRIIPPDV 186
>gi|359416222|ref|ZP_09208574.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358033425|gb|EHK01978.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 351
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G RI
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGFDLQRTPTSTKIVVEAQRPGLVIGRGGSRI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTS +++ F F +E+ ++ + A A+S+ L G V+R Y +R +
Sbjct: 62 RELTSALEEEFDFENPQIEVN--EIEDADGDAQVVADSIADWLEKGGHVKRVGYTYVRRM 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 168
E+G G EV ++GKL R ++ KF GY+ G E +
Sbjct: 120 KEAGVIGAEVEITGKLSGNRGRTEKFSFGYVKRCGNTSKENV 161
>gi|385805558|ref|YP_005841956.1| 30S ribosomal protein S3 [Fervidicoccus fontis Kam940]
gi|383795421|gb|AFH42504.1| 30S ribosomal protein S3P [Fervidicoccus fontis Kam940]
Length = 251
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L ++ GY+GV+V TP+ T ++IRA R ++G +G+ I+
Sbjct: 5 KRYFIEKNMSVVKVDEYLAKQFYRAGYAGVDVYRTPLGTRVVIRAERPAFIIGRRGQTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L++V + F EN ++ V N L A A L L G R+ + LR IM
Sbjct: 65 TLSNVFENYFGL-ENP-QITVMPVENPDLNARVVAFRLAVSLERGFHFRKLAFAALRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA G E+I+SGK+ ++RA+ KF+ G + +G+ +D AV H LL+
Sbjct: 123 AAGAAGAEIIISGKITSERARYEKFRAGKIYKTGEQATYIVDKAVAHALLK 173
>gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3 [Aeropyrum pernix K1]
gi|6685919|sp|Q9YF78.1|RS3_AERPE RecName: Full=30S ribosomal protein S3
gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
Length = 246
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T++ K F+ G+ +++E L + E GYS V+V T + T I I A R ++G
Sbjct: 1 MPTKVVKH--FLNQGLLRTKIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIG 58
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+G IR L V Q F P + + E+ N L A QA + + G+ RR +
Sbjct: 59 RRGATIRRLQEVFQTVFGLPNPRIRV--EQPENPMLDARVQAFRIARSIERGIHFRRVAF 116
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+ IM +GA G E+ +SGKL ++RA+ KFK G + SG V+E +D A
Sbjct: 117 AAINRIMSNGALGVEITISGKLTSERARFEKFKAGKVYKSGHKVDELVDRA 167
>gi|284162454|ref|YP_003401077.1| 30S ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
Length = 219
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D + ++ E L E+ G+ GV++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIRDRLIKLKVKEWLKEEVKNAGFGGVDIVRTPLGTQVSLFVERPGLVIGRGGRRIK 63
Query: 68 ELTSVVQKRFK-FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
++Q++ K F ++ +L ++V A A L L G RRA Y L I
Sbjct: 64 ----ILQEKLKEFGLDNPQLSVDEVKRPEFNAQLMATLLARALERGWYFRRAGYRFLYRI 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
ME+GAKGC++ +SGKL ++RA++ KF G ++ +G P E +D
Sbjct: 120 MEAGAKGCQIEISGKLVSERARTEKFTAGTIVHTGDPAYELVDKG 164
>gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 207
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R+F+ D + +++ L EL++ G+S VE++ TP+ T I + V+G G+ I
Sbjct: 4 ERRFIDDAIIKLNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAID 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT ++ RF N+ + +V N+ + + A+ + +KL G+ R+ L+ IM
Sbjct: 64 DLTETIKSRFNV--NNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIM 121
Query: 128 ESGAKGCEVIVSGKLRAQ--RAKSMKFKDGYMISSGQPVN 165
E+GA G E+I+SGKL A+ RAKS++ GY+ +G +N
Sbjct: 122 ENGALGAEIIISGKLAAKGARAKSIRKSVGYIPKAGDVIN 161
>gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3 [Thermosphaera aggregans DSM 11486]
gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
Length = 229
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F++ G+ ++E L + GY+GVEV TP ++I A ++G G I+
Sbjct: 7 KSYFLSYGLKKLMIDEFLANYFKDAGYAGVEVFRTPTGHRVVIYAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT+++Q RF +V + V + L A A + L + RR G+L+ IM
Sbjct: 67 KLTTILQTRFGL--ENVNITVSPVMDPDLNARVVAFRIVRALEKEIPFRRVMMGMLKRIM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++GA G E+I+SGKLR +RA K + G + +G+PV ID AV LL+
Sbjct: 125 DAGAVGAEIIISGKLRGERATYEKMRVGKIYKAGEPVEYIIDRAVARALLK 175
>gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
Length = 214
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+ + +G AEL+E+ + ++ Y+G+E+++ +I I+ +L +K ++L
Sbjct: 8 QIIKEGKIKAELDELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQL 67
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+++ +R + + EK+ ++ L AE LR + +R ++R + ++
Sbjct: 68 QNMIAQRLNMIPEHIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQA 127
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
G +G + VSGK++ QRAK+ KF DG +I +GQP EYI A L +Q
Sbjct: 128 GGQGVCIRVSGKIKGQRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQ 177
>gi|347524202|ref|YP_004781772.1| 30S ribosomal protein S3 [Pyrolobus fumarii 1A]
gi|343461084|gb|AEM39520.1| ribosomal protein S3 [Pyrolobus fumarii 1A]
Length = 242
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ FV + A+++E L + GY+GV + P+ + I A R ++G G+ IR
Sbjct: 5 KKYFVQKALREAKIDEYLAKRFYRAGYAGVRIIELPIGHRVYIYAERPGMIIGRGGQTIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
EL + +K F N+ ++ +V L A A + L G RR +LR I+
Sbjct: 65 ELQYIFEKHFGL--NNPQVSVRRVEEPDLNARVVASRIAVLLERGAHYRRVANVMLRRIL 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA G E+++SGKLR +RA+ K + G + S+G V +D AV HVLL+
Sbjct: 123 AAGAIGAEIVISGKLRTERARYEKLRAGKVYSTGYQVEYMVDRAVMHVLLK 173
>gi|288931516|ref|YP_003435576.1| 30S ribosomal protein S3 [Ferroglobus placidus DSM 10642]
gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
Length = 223
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D V + E + E+ G+ G+++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIEDKVKKLMVKEWIVEEVRNAGFGGLDIVRTPLGTQVTLFVERPGLVIGRGGRRIK 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT +K +F ++ ++ ++++ A A L L G R+A Y L IM
Sbjct: 64 ALT---EKLKEFGLDNPQISVDEIDKPEFNAQLMASLLARALERGWYFRKAGYRFLYRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP----VNEYIDSAVRHV 175
E+GAKGCE+ +SGKL ++RA++ KF G +I +G P V E D A++ +
Sbjct: 121 EAGAKGCEIEISGKLTSERARTEKFIAGTIIHTGDPAITCVREGFDIAIKKL 172
>gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 214
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 10/162 (6%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L + + GY G E+ +PV T I I T+ V+G +G IRELT ++K F+
Sbjct: 11 IDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTENLEKIFELQ 70
Query: 81 ENSVELYAEKV---NNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
+ ++ ++ N R +C +AQ + G A RRA + IM SGA G E+
Sbjct: 71 NLQISVFEVEIPEQNARIMCNRVAQT------VARGTAFRRAAMWTVNAIMRSGALGAEI 124
Query: 137 IVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
I++GKLR++R+ + K+KDG + +G P + AV V L+
Sbjct: 125 IIAGKLRSERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLK 166
>gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
gi|152060866|sp|A2BMC5.1|RS3_HYPBU RecName: Full=30S ribosomal protein S3
gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L + GY+GV++ P+ T +II A R ++G +G IR
Sbjct: 5 KRYFIKKAMVQTQIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++ + F ++ ++ +V N L A A + L G RR + R ++
Sbjct: 65 QLAAIFEHEFGL--SNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVL 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
+GA G ++++SGKLR +RA+ K + G + ++G V +D AV HV L+ L ++
Sbjct: 123 NAGAIGVQIVISGKLRTERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVM 182
Query: 188 ISVP 191
I P
Sbjct: 183 IVKP 186
>gi|158187818|gb|ABW23198.1| ribosomal protein rps3 [Eurythoe complanata]
Length = 105
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 47/59 (79%)
Query: 133 GCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
GCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+D+AVRHVLLRQ L + I +P
Sbjct: 1 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDTAVRHVLLRQGVLGIKVKIMLP 59
>gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484671|dbj|BAJ50325.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
A++ E L +L + GV + TP+ T + I A R V+G KG+ I+E+T ++K+F
Sbjct: 15 ADIEEYLREKLKNAFFGGVSISFTPLGTRVTIYAMRPSRVIGPKGKVIKEITEALEKQFG 74
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ + +V L AE + L GL RR + ++ IME+GAKG EV +
Sbjct: 75 --VENPVVTVVEVEVPELNPYVMAERIAQDLARGLRYRRVGFWAVKRIMEAGAKGVEVHI 132
Query: 139 SGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
SGKL + R+++ KF +G+M SG+ Y+ VLL+
Sbjct: 133 SGKLTSARSRTEKFTEGFMPKSGELAMNYVLEGKSSVLLK 172
>gi|440907841|gb|ELR57934.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 158
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 52/74 (70%), Gaps = 7/74 (9%)
Query: 109 LLGGLAV---RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVN 165
+GGL V AC G R ++ K CEV+VSGKL+ QRAKSMKF DG MI SG PVN
Sbjct: 25 FVGGLTVLGPALACCGSSRRVI----KDCEVVVSGKLQGQRAKSMKFVDGLMIHSGDPVN 80
Query: 166 EYIDSAVRHVLLRQ 179
Y+D+AVRHVLLRQ
Sbjct: 81 YYVDTAVRHVLLRQ 94
>gi|297527401|ref|YP_003669425.1| 30S ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
Length = 225
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L + GY+G+E+ TP +II A V+G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVIIYAEYPGRVIGRGGSIIRKLMTIMQTHFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V + V + L A A + L + RR +LR IME+GA G E+I+SG
Sbjct: 79 -ENVNITVSPVPDPDLNARVVAFRIVRALEKEIPYRRVAMAMLRRIMEAGAVGAEIIISG 137
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
KLR++RA+ K K G + +G V+ +D AV LL++
Sbjct: 138 KLRSERARYQKLKAGRIYKAGDMVDYVVDRAVGKALLKR 176
>gi|119598703|gb|EAW78297.1| hCG2022018 [Homo sapiens]
Length = 117
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGAKGC+V+ SGKLR QRAKSMKF DG I SG P+N Y+ +AV HVLLRQ
Sbjct: 1 MESGAKGCKVMASGKLRGQRAKSMKFVDGLTIHSGDPINYYVGTAVCHVLLRQ 53
>gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon]
Length = 234
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 3/177 (1%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FV +G+ ++E +EL GY G++++ TP+ T+I + + ++G+ G+RI+++T
Sbjct: 6 FVEEGIKKVRMDEYFQKELERAGYGGMDIKRTPMGTQITVHVEKPGMIIGKNGKRIKKVT 65
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+ K+ + ++ ++ + + L A + L + G RRA L+ IM +G
Sbjct: 66 DEITKKQEL--DNPQIDVQPIAAPELSAQLMSNRLAKLIERGWHFRRAGRSTLQRIMGAG 123
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVML 187
A GCE+ +SGKLR R + K +GY+ G E +D + ++ +I VM+
Sbjct: 124 ALGCEITMSGKLRGPRGRVEKMVEGYIKHCGSVAEEIVDKGY-SIAQKKTGVIGVMV 179
>gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 269
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+Q S RKF+ V + E L + + G+ G++ + TP T++ + A R V+G K
Sbjct: 2 SQNSTIRKFIDRNVERLLVREFLLSKTEKAGFGGLDFQRTPEGTKVTLSAERVGMVIGRK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G+ I EL +Q F +E+ +++N L A A L L G RRA +
Sbjct: 62 GKIINELQRRLQNDFNLENPRLEVA--EIDNPALNAQVMASKLASALERGWYFRRAGHSS 119
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
L IM++GAKGC V++SGKL R ++ KF+ G++ G +++D
Sbjct: 120 LLNIMDAGAKGCLVVLSGKLTGSRNRTQKFQAGHIKYCGDTAIQFMD 166
>gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3 [Acidilobus saccharovorans 345-15]
gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
Length = 238
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ +++E L + GY+GV++ + + T + I A R V+G +G IR
Sbjct: 5 KSYFLRQGLTRVKVDEYLAQNFYTAGYAGVQIVQSGLGTRVHIFAERPALVIGRRGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L +V++K F V++ + +N L A QA + L G RR +R IM
Sbjct: 65 KLQAVLEKVFGL--EGVQVTVSQPDNMELNARVQAFRIARALEMGYHFRRVAMATMRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
E+GA G E+++SGKL +RA+ K + G +I +G V+ Y D A+ + L
Sbjct: 123 EAGAVGVEIVISGKLSRERARFEKLQAGKVIKTGNVVDVYTDRAIAYAKL 172
>gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3 [Staphylothermus marinus F1]
gi|152060907|sp|A3DNB3.1|RS3_STAMF RecName: Full=30S ribosomal protein S3
gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1]
Length = 224
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L + GY+G+E+ TP ++I A ++G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLMTIMQTHFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V + V + L A A + L + RR +LR +ME+GA G E+I+SG
Sbjct: 79 -ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEAGAVGAEIIISG 137
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
KLR++RA+ K K G + +G V+ +D AV LL++
Sbjct: 138 KLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKR 176
>gi|226476716|emb|CAX72250.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 102
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L Q
Sbjct: 1 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQ 53
>gi|389860655|ref|YP_006362895.1| 30S ribosomal protein S3 [Thermogladius cellulolyticus 1633]
gi|388525559|gb|AFK50757.1| ribosomal protein S3 [Thermogladius cellulolyticus 1633]
Length = 228
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ G+ +++ L + GY+GVE+ TP ++I A ++G G IR
Sbjct: 7 KQYFINLGLKKTMIDQFLASYFVDAGYAGVELYKTPTGHRVVIYAEYPGRLIGRGGSVIR 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT++ Q RF EN V + V + L A A + L + RR +L+ IM
Sbjct: 67 KLTAIFQTRFGL-EN-VNITVSPVTDADLNARVVAFRIVRALEKEIPYRRVMMAMLKRIM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++GA G E+++SGKLR +RA K + G + +G V+ +D AV LL+
Sbjct: 125 DAGALGAEIVISGKLRGERATYEKMRTGKIYKAGDLVDYIVDRAVAKTLLK 175
>gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304]
gi|6094176|sp|O28360.1|RS3_ARCFU RecName: Full=30S ribosomal protein S3
gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM 4304]
Length = 229
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + + + E + E+ G+ GV++ TP+ T++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 68 ELTSVVQK-RFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
LT ++ + P+ SV+ + N L A A +L G RRA Y L I
Sbjct: 64 ALTEKLKDFGIENPQVSVDEVEKPEFNAQLMASLLARALER----GWYFRRAGYRFLYRI 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVM 186
ME+GAKGCE+ +SGKL ++RA++ KF G ++ +G P + + ++++ ++ V
Sbjct: 120 MEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMVQKGF-DIAIKKLGVLGVS 178
Query: 187 LISVPVIV 194
+ +P V
Sbjct: 179 VRIIPPDV 186
>gi|170033439|ref|XP_001844585.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167874323|gb|EDS37706.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 258
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 70/150 (46%), Gaps = 58/150 (38%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LA GY GVE VTP R+EIII TRTQN+LGEK IRELT++VQ
Sbjct: 101 LAAVGYFGVEFHVTPNRSEIII-TTRTQNMLGEKRHSIRELTAIVQ-------------- 145
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
KL+GGL+V ACY V+ ++SGAKG E ++
Sbjct: 146 -------------------KLIGGLSVCGACYDVV--AVDSGAKGFEAVLF--------- 175
Query: 149 SMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
P NEY D+ RHVLLR
Sbjct: 176 -------------DPCNEYFDTITRHVLLR 192
>gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3 [Desulfurococcus mucosus DSM 2162]
gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
Length = 222
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L + GY+ VE+ TP ++I A ++G G I++L++++Q RF
Sbjct: 20 IDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQTRFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
++V + V + L A A + L + RR +L+ +M++GA G E+IVSG
Sbjct: 79 -DNVNVTISPVVDPDLNARVVAFRIVRALEKEIPFRRVIMYMLKRVMDAGAVGAEIIVSG 137
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
KLR +RA K K G + +G+PV +D AV LL+
Sbjct: 138 KLRGERATYEKLKAGKVYKAGEPVEYVVDRAVAKALLK 175
>gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3 [Metallosphaera sedula DSM 5348]
gi|172046893|sp|A4YCX2.1|RS3_METS5 RecName: Full=30S ribosomal protein S3
gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348]
Length = 240
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TP+ T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L +++K F EN ++ + L A A L L G RRA + +R IM
Sbjct: 65 RLAQILEKYFNL-ENP-QITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLK 173
>gi|374633062|ref|ZP_09705429.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
gi|373524546|gb|EHP69423.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
Length = 231
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L ++ Y+G E+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSLTRVMVDEYLAKQYYNAEYAGSEIIKTPMGTRVIIYAGRPAMIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++++ F EN ++ + L A A L L G RRA + +R IM
Sbjct: 65 QLHQILERYFNL-ENP-QITVAQPEKPELNARVMAFRLAVTLERGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAV 172
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNSLDVMVDRAI 167
>gi|170290796|ref|YP_001737612.1| 30S ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 251
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV +G+ +L+E + + + G+ GVE+ TP+R I + ++G GR +
Sbjct: 11 KKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSKR 70
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
++ ++++ ++ A+KV+ L A + ++ G ++ Y L +M
Sbjct: 71 ISDILKEELGIQNPYIQ--AKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMA 128
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GAKG E+ +SGK +QRA+ +F++G + GQ E ++ AV+HVL+ Q
Sbjct: 129 EGAKGVEIRLSGKFGSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQ 179
>gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
Length = 239
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TP+ T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L ++++ F S ++ + L A A L L G RRA + +R IM
Sbjct: 65 RLAQILERYFNL--ESPQITVAQPEKPELNARVMAFRLAVTLEKGYHFRRAAFITIRKIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNGLDVMVDRAIAIATLK 173
>gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
Length = 223
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L + GY+ VE+ TP ++I A ++G G I++L++++Q +F
Sbjct: 20 IDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQNKFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
++V + V + L A A + L + RR +L+ +M++GA G E+I+SG
Sbjct: 79 -DNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVMDAGAIGAEIIISG 137
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
KLR +RA K K G + +G+PV +D AV LL+
Sbjct: 138 KLRGERATYEKLKAGKVYKAGEPVEYMVDRAVVKALLKP 176
>gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3 [Thermoproteus uzoniensis 768-20]
gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +LA GY E+ TP+ T I+I A R ++G+KG ++EL+ ++ +
Sbjct: 2 IKEFLEYKLARLGYVDSEILKTPLGTRIVIYAERPSRIIGKKGAVVKELSQILGSKLGVE 61
Query: 81 ENSVELYA-EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ KV+ + A + + G+ RR + +R + E+GA+G E+++S
Sbjct: 62 NPQIDVIDISKVDVPEMFPKVVAYRIANAMAKGIRFRRVAFIAIRQVTEAGARGFELVIS 121
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RAK K+K G + +G + + SAV HVLL+
Sbjct: 122 GKLSTERAKFEKYKIGKVYKTGADSTKTMRSAVVHVLLK 160
>gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
Length = 228
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D + + E L LA+ GY +V TP+ T II+ A R ++G KG ++E
Sbjct: 12 KKILQDKIKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIVYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT ++ K+ + EN + + + N L A + + + G+ RRA +R IM+
Sbjct: 72 LTELLSKKLEV-ENPI-IDVTPIQNPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMD 129
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GAKG EV +SGKL ++R++ K+ G + +G + V VLL+
Sbjct: 130 GGAKGAEVTISGKLTSERSRFEKYIYGTIYKNGFDSRTKVQRFVGQVLLK 179
>gi|390938985|ref|YP_006402723.1| 30S ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
gi|390192092|gb|AFL67148.1| ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
Length = 223
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ ++E L + GY+ VE+ TP ++I A ++G G I+
Sbjct: 7 KSYFLEYGLKKLMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L++++Q R ++V + V + L A A + L + RR +L+ +M
Sbjct: 67 KLSTILQNRLGL--DNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
++GA G E+I+SGKLR +RA K K G + +G+PV +D AV LL+
Sbjct: 125 DAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYIVDRAVVKALLKP 176
>gi|352682734|ref|YP_004893258.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
gi|350275533|emb|CCC82180.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
Length = 216
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L +LA GY EV TP+ T I+I A R ++G+KG ++E
Sbjct: 12 KKILQDNVKRWMIKEFLEYKLARLGYIYSEVLKTPLGTRIVIYAERPSRIIGKKGAVVKE 71
Query: 69 LTSVVQKRFKFPENSVELYA-EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L+ ++ + +++ KV+ + A + + G+ RR + +R +
Sbjct: 72 LSQILSAKMGVDNPQIDVIDISKVDVPEMFPKVIAYRIANAMAKGIRFRRVAFVAVRQVT 131
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
E+GA+G E+++SGKL +RAK K+K G + SG + + A HVLL+
Sbjct: 132 EAGARGFELVISGKLSTERAKFEKYKVGKVYKSGNDSMKTVRRAAVHVLLK 182
>gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 258
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L RE G+ G+ TP T+I +RA + V+G +G+ I EL++ ++ F +
Sbjct: 22 EYLLRETERAGFGGLTFNRTPDGTKISLRAEQVGRVIGRRGKVIHELSARLKNDFFL--D 79
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
L E+V L A A + L G RRA +G + IM++GA+GC V++SGK+
Sbjct: 80 RPHLDVEEVTEPRLNAQIMASRMSSSLERGWFFRRAGHGTAQQIMDAGARGCLVVLSGKI 139
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYID 169
R + KF+ G++ G+ E++D
Sbjct: 140 TGARHRVEKFQQGHIKFCGETALEFMD 166
>gi|432092120|gb|ELK24807.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 133
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVM 186
ME GA GCEV+VSGKL+ QRA S+K DG MI SG PVN Y+D+AV H L R+ L +
Sbjct: 1 MERGADGCEVVVSGKLQGQRAASVKVVDGLMIRSGDPVNCYVDTAVHHGLPRRGGLGIKV 60
Query: 187 LISVP 191
I++P
Sbjct: 61 KITLP 65
>gi|22759729|dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]
Length = 143
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/36 (94%), Positives = 35/36 (97%)
Query: 144 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
AQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQ
Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQ 36
>gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
Length = 228
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L LA+ GY +V TP+ T III A R ++G KG ++E
Sbjct: 12 KKILQDKVKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIIYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT ++ ++ EN + + + + L A + + + G+ RRA +R IM+
Sbjct: 72 LTDLLSRKLDV-ENPI-IDVTPIQSPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMD 129
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GAKG EV +SGKL ++R++ K+ G + +G + V VLL+
Sbjct: 130 GGAKGAEVTISGKLTSERSRFEKYVFGVIYKNGFDSRTKVQRFVGQVLLK 179
>gi|193083750|gb|ACF09437.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 259
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
R F+ V + E L RE G+ G+ TP T++ ++A + V+G +G+ I E
Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +Q F EN L E+V L A A L L G RRA + + IM+
Sbjct: 68 LQRRLQNDFIL-ENP-HLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMD 125
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA+GC VI+SGK+ R + KF+ G++ G+ E++D+
Sbjct: 126 AGARGCLVILSGKITGPRHRVEKFQQGHVKFCGETALEFMDTG 168
>gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 231
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L +E G+ G+ TP T++ + A + V+G +G+ I EL +Q+ FK
Sbjct: 21 EYLLKETERAGFGGLHFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQRRLQEDFKLTNP 80
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
+E+ E++ + + A A L L G RRA + ++ IM++GA+GC VI+SGK+
Sbjct: 81 QLEV--EEIEDSRINAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIVILSGKI 138
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYID 169
R + KF+ G++ G+ +++D
Sbjct: 139 TGARHRVEKFQKGHIKYCGETALQFMD 165
>gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3 [Pyrobaculum calidifontis JCM 11548]
gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
Length = 220
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 28 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 87
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ L A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 88 NPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLMEAGAKGFEIVVS 147
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RAK K G + G + AV HVLL+
Sbjct: 148 GKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLK 186
>gi|152060898|sp|A3MTL3.2|RS3_PYRCJ RecName: Full=30S ribosomal protein S3
Length = 216
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 24 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ L A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RAK K G + G + AV HVLL+
Sbjct: 144 GKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|193084311|gb|ACF09970.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 367
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
R F+ V + E L RE G+ G+ TP T++ ++A + V+G +G+ I E
Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +Q F EN L E+V L A A L L G RRA + + IM+
Sbjct: 68 LQRRLQNDFIL-ENP-HLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMD 125
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
+GA+GC VI+SGK+ R + KF+ G++ G+ E++D+
Sbjct: 126 AGARGCLVILSGKITGPRHRVEKFQQGHIKFCGETALEFMDTG 168
>gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 307
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M Q + R F+ V + E L RE G+ G+E TP T++ + A + V+G
Sbjct: 1 MKRQSNTIRTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+G+ I EL ++ FK +E+ ++ L A A L L G RRA +
Sbjct: 61 RRGKVIHELQYRLKSDFKLENPRLEV--NEIEEPRLNAQVMASRLASSLERGWFFRRAGH 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+ IM++GA+GC +I+SGK+ R + KF+ G++ G+ +++D
Sbjct: 119 STAQNIMDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMD 167
>gi|340344786|ref|ZP_08667918.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519927|gb|EGP93650.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 251
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+ + D L + L + + G+S E+ TP+ T + + TR V+G KG IRE
Sbjct: 5 KNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPMGTRVALHVTRPGIVIGRKGSGIRE 64
Query: 69 LTSVVQKRFKF--PENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
LT + FK P+ SV E+ +++ +C + L G A RRA L+
Sbjct: 65 LTDKLATDFKLKNPQISVVEIAKPELSPSVMC-----NRMASHLERGTAFRRATMWTLKQ 119
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
IM++GA G ++ +SGKLR R+ K G + +G +D + HV
Sbjct: 120 IMDNGAMGVQITISGKLRGDRSAFEKHSAGILPRAGHHAEVIVDEDIAHV 169
>gi|147827332|emb|CAN62175.1| hypothetical protein VITISV_001516 [Vitis vinifera]
Length = 1989
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 13 ADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSV 72
+D FA LNE+L R LA+DG SGVEVRV P+ TEIII AT+TQNVL ++GR REL +
Sbjct: 547 SDVSIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAAR 604
Query: 73 VQK 75
VQK
Sbjct: 605 VQK 607
>gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|393796604|ref|ZP_10379968.1| 30S ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 251
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IRELT + F K P+ SV E+ +++ +C A R G A RRA
Sbjct: 61 GIRELTDKLATDFGLKNPQISVVEIDKPELSPSVMCNRMAAHLER-----GTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
L+ IME+GA G ++ +SGKLR R+ K G + +G +D + HV
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHV 169
>gi|48477718|ref|YP_023424.1| 30S ribosomal protein S3 [Picrophilus torridus DSM 9790]
gi|61215562|sp|Q6L1C1.1|RS3_PICTO RecName: Full=30S ribosomal protein S3
gi|48430366|gb|AAT43231.1| small subunit ribosomal protein S3P [Picrophilus torridus DSM 9790]
Length = 217
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 2/172 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+++FV D + ++E L +E G+ G+E++ TP T I + R V+G G +I
Sbjct: 2 KEKRFVNDNIKRLLVSEYLRKENDNAGFGGMEMKRTPYGTNITLYVNRPGLVIGRHGTKI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+E+T ++KRF +E+ ++VN L ++ + L G R+A LR +
Sbjct: 62 KEMTETLEKRFAIESPQIEV--KEVNTPDLNPQIASKKIALSLEKGWNYRKAGNTSLRKM 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
++ A G + + GK+ +RA++ KF G + SG+P ++ L+
Sbjct: 120 IDLNAPGVLIRIGGKISGERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLK 171
>gi|296083024|emb|CBI22428.3| unnamed protein product [Vitis vinifera]
Length = 116
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Query: 16 VFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
+ FA LNE+L R LA+DG SGVEVRV P+ TEIII AT+TQNVL ++GR REL + VQK
Sbjct: 11 IIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAARVQK 68
>gi|257076565|ref|ZP_05570926.1| 30S ribosomal protein S3P [Ferroplasma acidarmanus fer1]
Length = 228
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ + K++KFV+D + + E L E G+ G++++ TP T I + R V+G
Sbjct: 4 SDMMKEKKFVSDNIKKLLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRH 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G +I+ +TS+++ ++ +E+ ++V N L ++ + L G R+A
Sbjct: 64 GSKIKAMTSILETKYGLESPQIEV--KEVENADLNPQVISKKIALSLEKGWNYRKAGNTT 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL 182
LR I++ A+G + + GK+ +RA++ KF G + SG+P + + +L+ ++
Sbjct: 122 LRRIIDQHARGVLIRIGGKISGERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAI 181
Query: 183 -IFVMLI 188
I+V L+
Sbjct: 182 GIYVRLL 188
>gi|379994267|gb|AFD22760.1| 40S ribosomal protein S3, partial [Collodictyon triciliatum]
Length = 100
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 138 VSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
VSGKLRAQRAK MKF+DGYMI SG P Y+DSAVRHV++RQ
Sbjct: 4 VSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVRHVMMRQ 45
>gi|407464758|ref|YP_006775640.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
gi|407047946|gb|AFS82698.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
Length = 262
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TPV T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR LT + F K P+ SV E+ ++ +C + L G A RRA
Sbjct: 61 GIRALTDKLASDFGLKNPQISVVEIEKPELAPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
L+ IME GA G ++ +SGKLR R+ K G + +G +D + HV
Sbjct: 116 TLKQIMEGGAMGVQITISGKLRGDRSAFEKHTQGILPRAGHHAEIVVDEDIAHV 169
>gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3 [Pyrobaculum neutrophilum V24Sta]
gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Pyrobaculum neutrophilum
V24Sta]
Length = 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++ +
Sbjct: 31 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGAIVKEISNILMNKLGVE 90
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 91 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAVRQLMEAGAKGFEIVVS 150
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV HVLL+
Sbjct: 151 GKLSTERARFEKHTYGKLYKIGYDAKNRVRRAVVHVLLK 189
>gi|386876664|ref|ZP_10118757.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
gi|386805532|gb|EIJ65058.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
Length = 251
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TPV T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLRDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
IR LT + F K P+ SV +++ L + L G A RRA
Sbjct: 61 GIRSLTEKLATDFGLKNPQISVV----EIDKPELAPSVMCNRMASHLERGTAFRRATMWT 116
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
L+ IME GA G ++ +SGKLR R+ K G + +G +D + HV
Sbjct: 117 LKQIMEGGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHV 169
>gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3 [Pyrobaculum islandicum DSM 4184]
gi|152060899|sp|A1RV98.1|RS3_PYRIL RecName: Full=30S ribosomal protein S3
gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
Length = 217
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++ +
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGVIVKEISNILVNKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVIAYRIANAMAKGVRFRRVMFVAVRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV HVLL+
Sbjct: 144 GKLSTERARFEKLTYGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|407462398|ref|YP_006773715.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
gi|407046020|gb|AFS80773.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
Length = 251
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLREAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR+LT + F K P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
L+ IME+GA G ++ +SGKLR R+ K G + +G + + HV
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHV 169
>gi|147838004|emb|CAN69383.1| hypothetical protein VITISV_017964 [Vitis vinifera]
Length = 286
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
++ EDGYS V+VRVTP+ EII+RATRTQN L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 196
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 2 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 61
Query: 81 ENSVELYA-EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 62 NPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 121
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV HVLL+
Sbjct: 122 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLK 160
>gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLRDAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR+LT + F K P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
L+ IME+GA G ++ +SGKLR R+ K G + +G + + HV
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHV 169
>gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 218
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L +E G+ G+ TP T++ +RA + V+G +G+ I +L +Q+ F +
Sbjct: 21 EFLLKETERAGFGGLNFNRTPEGTKVTLRAEQVGRVIGRRGKVIHDLQRRLQEDFDL--D 78
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
+ +L E++ A A L L G RRA + ++ IM++GA+GC V +SGK+
Sbjct: 79 NPQLEVEEIEESRTNAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIVTLSGKI 138
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYID 169
R + KF+ G++ G+ + +D
Sbjct: 139 TGARHRVEKFQKGHIKYCGETALQLMD 165
>gi|27734520|sp|Q8ZWI0.2|RS3_PYRAE RecName: Full=30S ribosomal protein S3
Length = 218
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 83
Query: 81 ENSVELYA-EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV HVLL+
Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|379004535|ref|YP_005260207.1| 30S ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
gi|375159988|gb|AFA39600.1| ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
Length = 220
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV HVLL+
Sbjct: 144 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|195650699|gb|ACG44817.1| hypothetical protein [Zea mays]
gi|413917295|gb|AFW57227.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 80
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/30 (100%), Positives = 30/30 (100%)
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MKFKDGYMISSGQPVNEYIDSAVRHVLLRQ
Sbjct: 1 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 30
>gi|374325617|ref|YP_005083814.1| 30S ribosomal protein S3 [Pyrobaculum sp. 1860]
gi|356640883|gb|AET31562.1| 30S ribosomal protein S3P [Pyrobaculum sp. 1860]
Length = 218
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L+ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSRYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV H+LL+
Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDARNRVRRAVIHILLK 182
>gi|172046048|sp|A4WIY8.2|RS3_PYRAR RecName: Full=30S ribosomal protein S3
Length = 220
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV HVLL+
Sbjct: 144 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3 [Pyrobaculum arsenaticum DSM 13514]
gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
Length = 222
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 26 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 85
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 86 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 145
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GKL +RA+ K G + G + AV HVLL+
Sbjct: 146 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLK 184
>gi|374724270|gb|EHR76350.1| 30S ribosomal protein S3 / S3P [uncultured marine group II
euryarchaeote]
Length = 232
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA + S R V V + E L + G+ +++R TP TE+ + A R V+G
Sbjct: 1 MAGKKSTLRTIVNRNVERHLVKEFLMQNTKRSGFGALDIRRTPQGTEVTVHAERPGMVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KG+ I EL + + F EN +L E++ L A AE + L G RRA
Sbjct: 61 RKGKIINELQKRLNEEFDL-ENP-KLKVEEIEKATLNAQVMAEKIASALERGWYHRRAGN 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
+ IM+SGA+G V ++GKL R ++ K+ G+ V ++A++H+
Sbjct: 119 SAAQNIMDSGARGVIVTLAGKLTGSRNRTEKYIRGHXXXXXXHVKYCGETALQHM 173
>gi|149391843|gb|ABR25845.1| 40S ribosomal protein S3-a [Oryza sativa Indica Group]
Length = 85
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 31/33 (93%)
Query: 147 AKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
AKSMKFKDGYMISSG PVN YIDSAVRHVLLRQ
Sbjct: 1 AKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQ 33
>gi|193084211|gb|ACF09875.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 400
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVR----VTPVRTEIIIRATRTQNVL 59
++++ R FV V + E L +E G+ G+ T + T++ ++A R V+
Sbjct: 3 KVNQIRHFVDRNVERQLVREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVI 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G +G+ I EL ++ F EN +L E++ N L A A L L G RRA
Sbjct: 63 GRRGKVINELQRRIRTDFNL-ENP-KLQVEEIENPALNAQVMASKLASALERGWYFRRAG 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
+ + ++E+GAKGC +I++GKL R ++ KF G++ G+ ++D
Sbjct: 121 HSSVLNVIEAGAKGCLIIIAGKLTGSRHRTEKFLKGHIKFCGETALTHMD 170
>gi|222064015|emb|CAQ86670.1| putative ribosomal protein S3 [Histomonas meleagridis]
Length = 89
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQVSL---I 183
M++GA+GCEV++SGK+R+ RA +MKF++GYM+ SG +Y+ AV H+ ++Q + +
Sbjct: 1 MDAGARGCEVVISGKMRSARAAAMKFREGYMVKSGDVSQKYVLKAVGHIPMKQAVVGIRV 60
Query: 184 FVMLISVP 191
+ML P
Sbjct: 61 LIMLAHDP 68
>gi|118576057|ref|YP_875800.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
gi|152060854|sp|A0RVX9.1|RS3_CENSY RecName: Full=30S ribosomal protein S3
gi|118194578|gb|ABK77496.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
Length = 261
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF--K 78
L E L + + G+SGVEV P T+I + TR V+G KG IRELT ++K F K
Sbjct: 17 LREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDLK 76
Query: 79 FPENSV------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME-SGA 131
P+ V ELY + NR I + G A RRA ++ IME A
Sbjct: 77 SPQVDVKEIETPELYPGVMCNRMASHIER----------GTAFRRATMWTIQQIMEKKDA 126
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
G ++ +SGKLR R+ K G + +G + + V HV
Sbjct: 127 MGVQITISGKLRGDRSAFEKHTSGILPRAGHYADVIVLDDVVHV 170
>gi|13541161|ref|NP_110849.1| 30S ribosomal protein S3P [Thermoplasma volcanium GSS1]
gi|27734525|sp|Q97BX1.1|RS3_THEVO RecName: Full=30S ribosomal protein S3
gi|14324549|dbj|BAB59476.1| ribosomal protein small subunit S3 [Thermoplasma volcanium GSS1]
Length = 225
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+RKFV + V + E L +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFVNEAVKRLLVYEYLVKETENAGFGKMSMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+++T ++K++ +E+ + V + L A+ + L G + R+A L+
Sbjct: 62 QQMTETLEKKYAIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLKRT 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
+++GA+G + +SGK+ +RA+ KF G + SG+P
Sbjct: 120 IDAGARGVLIKISGKISGERARYQKFIYGNVKYSGEP 156
>gi|154281921|ref|XP_001541773.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411952|gb|EDN07340.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 151
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 36/46 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEII 49
ISK+RKFV GVF+A LN RELAE+GYSGVEVRVTP T+II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>gi|170066762|ref|XP_001868214.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167862957|gb|EDS26340.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 222
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
Query: 52 ATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL 110
RTQNVLGE IREL +VV+KRF +EL AEKV R LCAIAQAESL YKL+
Sbjct: 41 GPRTQNVLGESDHHIRELNAVVKKRF------IELNAEKVATRSLCAIAQAESLCYKLI 93
>gi|159041478|ref|YP_001540730.1| 30S ribosomal protein S3 [Caldivirga maquilingensis IC-167]
gi|157920313|gb|ABW01740.1| ribosomal protein S3- domain protein [Caldivirga maquilingensis
IC-167]
Length = 236
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 6/160 (3%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L + Y ++ T + T I+I A + ++G KG++++ L +++ +F
Sbjct: 25 IKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKALADILKSKFNLD 84
Query: 81 ENSVELYAEKVN--NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+++ E N L A+ A+++ G+ RRA LR + E+ +G EVI+
Sbjct: 85 NVVIDVIQEPHPEYNARLVALRIADAM----AKGIRFRRAAIIALRQLQEANVQGAEVII 140
Query: 139 SGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
SGKL +R++ K+ G +I +GQ E + AV VLL+
Sbjct: 141 SGKLTTERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLK 180
>gi|32400841|gb|AAP80652.1|AF479033_1 40S ribosomal protein [Triticum aestivum]
Length = 79
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 30/30 (100%)
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+KFKDGYMISSGQPVNEYID+AVRHVLLRQ
Sbjct: 2 VKFKDGYMISSGQPVNEYIDAAVRHVLLRQ 31
>gi|170061554|ref|XP_001866283.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167879747|gb|EDS43130.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 271
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 34/41 (82%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRT 55
G+F AELNE LTR+L +GYSGVEVRVTP RTEIII AT T
Sbjct: 228 GMFLAELNEFLTRQLVANGYSGVEVRVTPTRTEIIIMATCT 268
>gi|16082264|ref|NP_394722.1| 30S ribosomal protein S3P [Thermoplasma acidophilum DSM 1728]
gi|27734534|sp|Q9HIR5.1|RS3_THEAC RecName: Full=30S ribosomal protein S3
gi|10640611|emb|CAC12389.1| probable 30S ribosomal protein S3 [Thermoplasma acidophilum]
Length = 225
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+RKF+ + V + E + +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+++T ++K++ +E+ + V + L A+ + L G + R+A L
Sbjct: 62 QQMTDTLEKKYGIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRT 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
+++GAKG + +SGK+ +RA+ KF G + SG+P
Sbjct: 120 IQAGAKGVLIKISGKISGERARYQKFIYGNVKYSGEP 156
>gi|20094278|ref|NP_614125.1| 30S ribosomal protein S3 [Methanopyrus kandleri AV19]
gi|27734506|sp|Q8TX35.1|RS3_METKA RecName: Full=30S ribosomal protein S3
gi|19887318|gb|AAM02055.1| Ribosomal protein S3 [Methanopyrus kandleri AV19]
Length = 227
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV G+ EL+E L EL GY G+ ++ P T+II R +G +GR IR
Sbjct: 12 KKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRR 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ VQ+RF V + +++ + L A L L G+ RRA YG LR IM
Sbjct: 72 VEEEVQERFPL-LGRVSIEVKELPSPELNPRVVARRLASALERGIHFRRAAYGALRRIMN 130
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 168
+GAKG +I+SGKL RA++ KF +G + G+P +EY+
Sbjct: 131 AGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYM 170
>gi|170036208|ref|XP_001845957.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167878755|gb|EDS42138.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 281
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 35/46 (76%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT+VVQK
Sbjct: 16 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAVVQK 61
>gi|332105493|gb|AEE01378.1| ribosomal protein S3 [Bubalus bubalis]
Length = 34
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 31/34 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGY 34
MA QISKKRKFVADG+F AELNE LTRELAEDGY
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGY 34
>gi|65051|emb|CAA24702.1| ribosomal protein S1 [Xenopus laevis]
Length = 125
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 29/34 (85%)
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 19 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 52
>gi|328951230|ref|YP_004368565.1| 30S ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
gi|328451554|gb|AEB12455.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
Length = 247
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E++TRE+ G + +++ + + A + ++G G I+ + + +QKRF P
Sbjct: 39 IRELITREVYHGGIARIDIERAADNVSVTVHAAKPGVIIGRGGETIKRMRAELQKRF--P 96
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
++ L ++V N L A A+ + ++ AVRRA ++ +ME+GA+G +V+VSG
Sbjct: 97 NRTISLNVQEVPNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMEAGAQGAKVVVSG 156
Query: 141 KL 142
++
Sbjct: 157 RI 158
>gi|147795005|emb|CAN71930.1| hypothetical protein VITISV_040426 [Vitis vinifera]
Length = 414
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
++ EDGYS ++V+VT + EIIIRAT+TQN L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>gi|68010962|ref|XP_670951.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486681|emb|CAI03517.1| hypothetical protein PB301211.00.0 [Plasmodium berghei]
Length = 82
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GKLRAQRAKSMKF+DG++IS+G+P ++++A R L Q
Sbjct: 1 GKLRAQRAKSMKFRDGHLISTGEPSKRFVNTATRSAQLNQ 40
>gi|327243123|gb|AEA41162.1| ribosomal protein S3 [Metacarcinus magister]
Length = 31
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 33 GYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
GYSGV+VR TP RTEIII ATRTQNVLGEKG
Sbjct: 1 GYSGVQVRHTPARTEIIILATRTQNVLGEKG 31
>gi|313680509|ref|YP_004058248.1| 30S ribosomal protein S3 [Oceanithermus profundus DSM 14977]
gi|313153224|gb|ADR37075.1| SSU ribosomal protein S3P [Oceanithermus profundus DSM 14977]
Length = 247
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E++ E+A G + +++ + + A + ++G G I+ + + +QK F
Sbjct: 38 KVRELIENEVAHGGIARIDIERAADNLSVTVHAAKPGVIIGRGGETIKRMRAELQK--MF 95
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P ++ L ++V N L A A+ + ++ AVRRA ++ ++ESGA+G +V+VS
Sbjct: 96 PNRTIALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVVESGAQGAKVVVS 155
Query: 140 GKL-RAQRAKSMKFKDG 155
G++ A++A++ DG
Sbjct: 156 GRIGGAEQARTEWSSDG 172
>gi|384210006|ref|YP_005595726.1| 30S ribosomal protein S3 [Brachyspira intermedia PWS/A]
gi|343387656|gb|AEM23146.1| ribosomal protein S3 [Brachyspira intermedia PWS/A]
Length = 245
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDG 155
A++ ++K+G
Sbjct: 179 IARTEQYKNG 188
>gi|225621034|ref|YP_002722292.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
gi|225215854|gb|ACN84588.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
Length = 202
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 19 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 75
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 76 SITEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 135
Query: 146 RAKSMKFKDG 155
A++ ++K+G
Sbjct: 136 IARTEQYKNG 145
>gi|62263397|gb|AAX78158.1| unknown protein [synthetic construct]
Length = 224
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 64 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 123
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 124 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 180
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 181 GRLGGAEIARSEWARDG 197
>gi|445062113|ref|ZP_21374548.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30599]
gi|444506508|gb|ELV06835.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30599]
Length = 245
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+++ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDATLAAQNVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDG 155
A++ ++K+G
Sbjct: 179 IARTEQYKNG 188
>gi|429123826|ref|ZP_19184358.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30446]
gi|426280395|gb|EKV57410.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30446]
Length = 245
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+++ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDATLAAQNVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDG 155
A++ ++K+G
Sbjct: 179 IARTEQYKNG 188
>gi|379716674|ref|YP_005305010.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379716752|ref|YP_005305088.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725356|ref|YP_005317542.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TI0902]
gi|385794093|ref|YP_005830499.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
NE061598]
gi|421754959|ref|ZP_16191917.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700075]
gi|61215376|sp|Q5NHW2.1|RS3_FRATT RecName: Full=30S ribosomal protein S3
gi|123063579|sp|Q14JB4.1|RS3_FRAT1 RecName: Full=30S ribosomal protein S3
gi|56603976|emb|CAG44964.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320288|emb|CAL08347.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
FSC198]
gi|282158628|gb|ADA78019.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
NE061598]
gi|377826805|gb|AFB80053.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828351|gb|AFB78430.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|377828429|gb|AFB78508.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|409089503|gb|EKM89543.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700075]
Length = 222
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 155 GRLGGAEIARSEWARDG 171
>gi|408843732|ref|YP_169380.2| 30S ribosomal protein S3, partial [Francisella tularensis subsp.
tularensis SCHU S4]
gi|408843735|ref|YP_666512.2| 30S ribosomal protein S3, partial [Francisella tularensis subsp.
tularensis FSC198]
Length = 220
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 155 GRLGGAEIARSEWARDG 171
>gi|41615265|ref|NP_963763.1| hypothetical protein NEQ481 [Nanoarchaeum equitans Kin4-M]
gi|40068989|gb|AAR39324.1| NEQ481 [Nanoarchaeum equitans Kin4-M]
Length = 236
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 2 ATQISKK--RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
A Q++ K RKF+ + E + L S V +R TP+ +II + R + +
Sbjct: 4 ALQMASKVIRKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMIS 63
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL-AVRRA 118
E R L +++ +F + +E+ + N L A AE L + + A RR
Sbjct: 64 EE---RKAHLAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRL 118
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
L IM +GA G E++++G+L QR K+ +FK G + +G
Sbjct: 119 AQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 161
>gi|337754255|ref|YP_004646766.1| 30S ribosomal protein S3 [Francisella sp. TX077308]
gi|336445860|gb|AEI35166.1| SSU ribosomal protein S3p (S3e) [Francisella sp. TX077308]
Length = 222
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFA-ELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ AD +A +LNE L ++LA S +++ +I I R V+G+KG
Sbjct: 22 WYADSSDYATKLNEDIKVREFLHKKLASAAVSKIQIERPAQNAKITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L S V K P V++ E+V + A A+S+ +L + RRA +
Sbjct: 82 EDVEKLRSDVNKLMGIP---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAM 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M+SGAKG +++VSG+L A+ A+S +DG
Sbjct: 139 QAAMKSGAKGIKIMVSGRLGGAEIARSEWARDG 171
>gi|118496858|ref|YP_897908.1| 30S ribosomal protein S3 [Francisella novicida U112]
gi|385792181|ref|YP_005825157.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|387823814|ref|YP_005823285.1| 30S ribosomal protein S3 [Francisella cf. novicida 3523]
gi|152060861|sp|A0Q4I9.1|RS3_FRATN RecName: Full=30S ribosomal protein S3
gi|118422764|gb|ABK89154.1| 30S ribosomal protein S3 [Francisella novicida U112]
gi|328675413|gb|AEB28088.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida 3523]
gi|328676327|gb|AEB27197.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida Fx1]
Length = 223
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFA-ELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ AD +A +LNE L ++LA S +++ +I I R V+G+KG
Sbjct: 22 WYADSSSYATKLNEDIKVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + V K P V++ E+V + A AES+ +L + RRA +
Sbjct: 82 EDVEKLRAEVHKLMGIP---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAM 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M+SGAKG +++VSG+L A+ A+S +DG
Sbjct: 139 QAAMKSGAKGIKIMVSGRLGGAEIARSEWARDG 171
>gi|152060885|sp|Q74MZ4.2|RS3_NANEQ RecName: Full=30S ribosomal protein S3
Length = 230
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RKF+ + E + L S V +R TP+ +II + R + + E R
Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEE---RKAH 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL-AVRRACYGVLRFIM 127
L +++ +F + +E+ + N L A AE L + + A RR L IM
Sbjct: 64 LAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
+GA G E++++G+L QR K+ +FK G + +G
Sbjct: 122 NAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155
>gi|384438867|ref|YP_005653591.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359290000|gb|AEV15517.1| hypothetical protein TCCBUS3UF1_4690 [Thermus sp. CCB_US3_UF1]
Length = 239
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ EVLT+EL G + +++ + + + V+G G +I+ L + K
Sbjct: 39 IREVLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLAK---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSG 155
Query: 141 KL 142
++
Sbjct: 156 RI 157
>gi|89255676|ref|YP_513037.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115314177|ref|YP_762900.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134302579|ref|YP_001122550.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501626|ref|YP_001427691.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254368628|ref|ZP_04984643.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
gi|290953206|ref|ZP_06557827.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
URFT1]
gi|421752464|ref|ZP_16189489.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
AS_713]
gi|421754330|ref|ZP_16191305.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
831]
gi|421758061|ref|ZP_16194921.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700103]
gi|421759892|ref|ZP_16196716.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70102010]
gi|422938172|ref|YP_007011319.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FSC200]
gi|423049986|ref|YP_007008420.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
F92]
gi|424675214|ref|ZP_18112123.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70001275]
gi|122325782|sp|Q0BNS1.1|RS3_FRATO RecName: Full=30S ribosomal protein S3
gi|123094541|sp|Q2A5G4.1|RS3_FRATH RecName: Full=30S ribosomal protein S3
gi|152060862|sp|A4IZS8.1|RS3_FRATW RecName: Full=30S ribosomal protein S3
gi|189045009|sp|A7N9T2.1|RS3_FRATF RecName: Full=30S ribosomal protein S3
gi|89143507|emb|CAJ78683.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115129076|gb|ABI82263.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134050356|gb|ABO47427.1| ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156252229|gb|ABU60735.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121536|gb|EDO65721.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
gi|407293323|gb|AFT92229.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FSC200]
gi|409084854|gb|EKM85015.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
831]
gi|409085048|gb|EKM85201.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
AS_713]
gi|409089809|gb|EKM89841.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70102010]
gi|409090631|gb|EKM90644.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700103]
gi|417434163|gb|EKT89131.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70001275]
gi|421950708|gb|AFX69957.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
F92]
Length = 223
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 155 GRLGGAEIARSEWARDG 171
>gi|225948|prf||1404256A ribosomal protein HS4
Length = 83
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY +E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGSMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV 82
>gi|359417826|ref|ZP_09209890.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358031816|gb|EHK00656.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 73
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSG-VEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G R
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGNFDLQRTPTSTKIVVEAQRPGLVIGRGGSR 61
Query: 66 IRELTSVVQKR 76
IRELTS +R
Sbjct: 62 IRELTSAPGRR 72
>gi|187932137|ref|YP_001892122.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226697715|sp|B2SDX9.1|RS3_FRATM RecName: Full=30S ribosomal protein S3
gi|187713046|gb|ACD31343.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 223
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGDDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 155 GRLGGAEIARSEWARDG 171
>gi|300870641|ref|YP_003785512.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
gi|404475011|ref|YP_006706442.1| 30S ribosomal protein S1 [Brachyspira pilosicoli B2904]
gi|431808531|ref|YP_007235429.1| 30S ribosomal protein S3 [Brachyspira pilosicoli P43/6/78]
gi|434383116|ref|YP_006704899.1| 30S ribosomal protein S3 [Brachyspira pilosicoli WesB]
gi|300688340|gb|ADK31011.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
gi|404431765|emb|CCG57811.1| 30S ribosomal protein S3 [Brachyspira pilosicoli WesB]
gi|404436500|gb|AFR69694.1| 30S ribosomal protein S1 [Brachyspira pilosicoli B2904]
gi|430781890|gb|AGA67174.1| 30S ribosomal protein S3 [Brachyspira pilosicoli P43/6/78]
Length = 245
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R + I R V+G KG+R+ + + VQK K P N +
Sbjct: 62 KESFDPAISDIQIVRFPDRINVFISTARVGVVVGPKGQRVEAVKAAVQKLVKKPIN---V 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SISEIKEAELDATLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDG 155
A++ ++K+G
Sbjct: 179 IARTEQYKNG 188
>gi|406965930|gb|EKD91514.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 213
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K +F+ + + ++ EVL ++L G S +E+ + +III R ++G G +
Sbjct: 28 KYHQFLGEDI---KIREVLMKKLRPAGISNIEIERAINKLKIIIFVARPGVLIGRGGAGL 84
Query: 67 RELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
EL + K K E S+E+ V N + A A+++ +L L R L
Sbjct: 85 TELKKFIMKTLKIKEEGSLEIVPMDVKNPDMSAYLVAQNIAEQLARRLPAARVMNQSLDR 144
Query: 126 IMESGAKGCEVIVSGKL 142
+M +GAKG +V+VSG++
Sbjct: 145 VMNAGAKGVKVVVSGRI 161
>gi|167626800|ref|YP_001677300.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254875930|ref|ZP_05248640.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596801|gb|ABZ86799.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841951|gb|EET20365.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 222
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFA-ELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ AD +A +LNE L ++LA S +++ +I I R V+G+KG
Sbjct: 22 WYADSSDYATKLNEDIKVREFLHKKLASAAVSKIQIERPAQNAKITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + V K P V++ E+V + A A+S+ +L + RRA +
Sbjct: 82 EDVEKLRADVNKLMGVP---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAM 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M+SGAKG +++VSG+L A+ A+S +DG
Sbjct: 139 QAAMKSGAKGIKIMVSGRLGGAEIARSEWARDG 171
>gi|161899235|ref|XP_001712844.1| ribosomal protein S3 [Bigelowiella natans]
gi|75756337|gb|ABA27232.1| ribosomal protein S3 [Bigelowiella natans]
Length = 262
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDS 170
+ R + LRF++ SG +GC + + G R++R K+ KF+ G + SG N++IDS
Sbjct: 156 SFRSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDS 212
>gi|344256720|gb|EGW12824.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 94
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
MKF DG MI G PVN Y+D+A+RHVLLRQ
Sbjct: 1 MKFVDGLMIHCGDPVNYYVDTAMRHVLLRQ 30
>gi|387885959|ref|YP_006316258.1| 30S ribosomal protein S3 [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870775|gb|AFJ42782.1| 30S ribosomal protein S3 [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 222
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFA-ELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ AD +A +LNE L ++LA S +++ +I I R V+G+KG
Sbjct: 22 WYADSSDYATKLNEDIKVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + V K P V++ E+V + A A+S+ +L + RRA +
Sbjct: 82 EDVEKLRADVNKLMGVP---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAM 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M+SGAKG +++VSG+L A+ A+S +DG
Sbjct: 139 QAAMKSGAKGIKIMVSGRLGGAEIARSEWARDG 171
>gi|297567278|ref|YP_003686250.1| 30S ribosomal protein S3 [Meiothermus silvanus DSM 9946]
gi|296851727|gb|ADH64742.1| ribosomal protein S3 [Meiothermus silvanus DSM 9946]
Length = 250
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ ++ +ELA G + +++ + + A + V+G G I+ L +Q KF
Sbjct: 38 QIRSLIEKELAPAGLARIDIERAADNVAVTVYAAKPGVVIGRGGETIKRLRETLQN--KF 95
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P +V L ++V N L A A+ + ++ AVRRA ++ I ESGA G +++VS
Sbjct: 96 PGKTVALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRIRESGALGAKIVVS 155
Query: 140 GKL 142
G++
Sbjct: 156 GRI 158
>gi|320451294|ref|YP_004203390.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
gi|320151463|gb|ADW22841.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
Length = 239
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ EVLT+EL G + +++ + + + V+G G +I+ L + +
Sbjct: 39 IREVLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLSQ---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +ME+GAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMEAGAKGAKVIVSG 155
Query: 141 KL 142
++
Sbjct: 156 RI 157
>gi|452994637|emb|CCQ93744.1| ribosomal protein S3 (BS3) [Clostridium ultunense Esp]
Length = 221
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++ A+ F A L+E L +LA+ G S +E+ R + + + V+G+ G
Sbjct: 21 RWYAEKDFAALLHEDLKIRKFLEEKLADAGISHIEIERAANRLNLTLHTAKPGMVIGKGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I L + + K + V + ++ L A AES+ +L ++ RRA +
Sbjct: 81 QEIENLRNAISK---MTDKKVHINVNEIKKPDLDAKLVAESIAKQLENRVSFRRAMKQAM 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ +M +GAKG +V VSG+L A+ A++ + +G
Sbjct: 138 QRVMRAGAKGVKVAVSGRLGGAEIARTEGYSEG 170
>gi|227501140|ref|ZP_03931189.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
gi|227216725|gb|EEI82126.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
Length = 239
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD F+EL +++ +E+ + G + +E+ +I I A + V+G+
Sbjct: 21 KWFADKKDFSELLVEDYNIRKIVKKEVYDAGIADIEIERAVNNLKITIFAAKPGMVIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL ++K P + + E++ + L A AES+ +L +A RRA
Sbjct: 81 GAGVEELKKKLEK--AAPSKRIIINVEEIKYQDLAAQLVAESIASQLENRVAFRRAMKQS 138
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
++ M +GAKG + +VSG+L A A+S + +G
Sbjct: 139 IQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEG 172
>gi|410696291|gb|AFV75359.1| ribosomal protein S3, bacterial type [Thermus oshimai JL-2]
Length = 239
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E LT+EL G + +++ + + + V+G G +I+ L + K
Sbjct: 39 IREFLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDQLSK---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSG 155
Query: 141 KL 142
++
Sbjct: 156 RI 157
>gi|218294760|ref|ZP_03495614.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
gi|218244668|gb|EED11192.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
Length = 239
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + LT+EL G + V++ + + + V+G G +I+ L + K
Sbjct: 38 QIRDYLTKELYPAGLARVDIERAADNVAVSVHVAKPGVVIGRGGEKIKVLRDALAK---L 94
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVS
Sbjct: 95 TGKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVS 154
Query: 140 GKL 142
G++
Sbjct: 155 GRI 157
>gi|254556023|ref|YP_003062440.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
gi|254044950|gb|ACT61743.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
Length = 217
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F A LNE L + LA+ S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFAAYLNEDLRIRKYIEQRLADASVSTVEIERAANRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N +E + L A ES+ +L G +A RRA
Sbjct: 81 SEVEALRKELNNLTSKRVHI--NIIE-----IKKPDLDAKLVGESIARQLEGRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M SGAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDG 170
>gi|384938265|ref|ZP_10029957.1| 30S ribosomal protein S3 [Mycoplasma canis UF31]
gi|419704931|ref|ZP_14232475.1| 30S ribosomal protein S3 [Mycoplasma canis UF33]
gi|419705576|ref|ZP_14233114.1| 30S ribosomal protein S3 [Mycoplasma canis UFG1]
gi|419706225|ref|ZP_14233756.1| 30S ribosomal protein S3 [Mycoplasma canis UFG4]
gi|384392919|gb|EIE39372.1| 30S ribosomal protein S3 [Mycoplasma canis UF33]
gi|384393226|gb|EIE39677.1| 30S ribosomal protein S3 [Mycoplasma canis UF31]
gi|384394879|gb|EIE41313.1| 30S ribosomal protein S3 [Mycoplasma canis UFG1]
gi|384395030|gb|EIE41463.1| 30S ribosomal protein S3 [Mycoplasma canis UFG4]
Length = 216
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ ++I + VLG++G+ I+ELT+ +QK K +V L ++ L A AE
Sbjct: 64 KVTVLIHTVKPAAVLGQEGKNIQELTTKLQKFVKNRHLNVNLQVLELKKPDLNAKLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYM 157
+ KL + R A +R M++GAKG + +VSG+L A+S + +G M
Sbjct: 124 IATKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEM 177
>gi|307006559|gb|ADN23564.1| 40S ribosomal protein S3 [Hyalomma marginatum rufipes]
Length = 91
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 152 FKDGYMISSGQPVNEYIDSAVRHVLLRQVSLIFVMLISVP 191
F DG MI SG+P N+Y+++AVRHVLLRQ L + I +P
Sbjct: 1 FVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLP 40
>gi|419704283|ref|ZP_14231833.1| 30S ribosomal protein S3 [Mycoplasma canis PG 14]
gi|384393071|gb|EIE39523.1| 30S ribosomal protein S3 [Mycoplasma canis PG 14]
Length = 216
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ ++I + VLG++G+ I+ELT+ +QK K +V L ++ L A AE
Sbjct: 64 KVTVLIHTVKPAAVLGQEGKNIQELTTKLQKFVKNRHLNVNLQVLELKKPDLNAKLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYM 157
+ KL + R A +R M++GAKG + +VSG+L A+S + +G M
Sbjct: 124 IAAKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEM 177
>gi|184155985|ref|YP_001844325.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227515493|ref|ZP_03945542.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260662758|ref|ZP_05863652.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
gi|183227329|dbj|BAG27845.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227086106|gb|EEI21418.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260552839|gb|EEX25838.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
Length = 219
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD + A LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKNYAAYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNNLTNKRVHI--NVVEIKKPD-----LDAHLVGESVAEQLENRIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG ++ V+G+L A ++ + DG
Sbjct: 134 RGAMQRTMRAGAKGIKIQVAGRLNGADMSRIESYSDG 170
>gi|47459076|ref|YP_015938.1| 30S ribosomal protein S3 [Mycoplasma mobile 163K]
gi|61215555|sp|Q6KI49.1|RS3_MYCMO RecName: Full=30S ribosomal protein S3
gi|47458405|gb|AAT27727.1| 30S ribosomal protein s3 [Mycoplasma mobile 163K]
Length = 225
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
+++ + + +LG+ G I +LT +QK + E + + + N L AI AE +
Sbjct: 67 VLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIILAEQIAI 126
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYM 157
KL R A +R M+SGAKG + VSG+L A+S + +G M
Sbjct: 127 KLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEM 177
>gi|303233154|ref|ZP_07319827.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
gi|302480739|gb|EFL43826.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
Length = 236
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + LA+ S VE+ + ++ I +R V+G+KG I +L + VQ+
Sbjct: 38 EIRKYLKKRLAKAALSRVEIERAGDKVKVSILTSRPGIVIGKKGGEIDDLRNDVQRIAGL 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P+ SV + ++ L A A+ + +L G +A RRA ++ ++GAKG + S
Sbjct: 98 PKGSVHVEVVEIKQPDLDAQLTADRIAEQLEGRVAFRRAVRKAVQAATKAGAKGIRIQCS 157
Query: 140 GKL 142
G+L
Sbjct: 158 GRL 160
>gi|406944039|gb|EKD75900.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 250
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN-SVEL 86
+L + G S VE+R + I IR + ++G G + EL +++RF E + L
Sbjct: 46 KLRDGGVSRVEIRRANDQMTIHIRTAKPGVIIGRSGSGVEELKRQIKRRFFGSEKMHIHL 105
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
E+V N + A + + ++L + RRA + +M+ GAKG ++IVSG+L
Sbjct: 106 EIEEVRNPDVDAELIMQGIVFQLEKRIPFRRAMKRSIEQVMQGGAKGVKIIVSGRL 161
>gi|388501238|gb|AFK38685.1| unknown [Lotus japonicus]
Length = 78
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 22/23 (95%)
Query: 157 MISSGQPVNEYIDSAVRHVLLRQ 179
MISSGQPV +YIDSAVRHVLLRQ
Sbjct: 1 MISSGQPVKDYIDSAVRHVLLRQ 23
>gi|300767827|ref|ZP_07077737.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308180017|ref|YP_003924145.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380031973|ref|YP_004888964.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|392948145|ref|ZP_10313760.1| SSU ribosomal protein S3p (S3e) [Lactobacillus pentosus KCA1]
gi|418274605|ref|ZP_12890103.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448820604|ref|YP_007413766.1| 30S ribosomal protein S3 [Lactobacillus plantarum ZJ316]
gi|38258338|sp|Q88XY0.1|RS3_LACPL RecName: Full=30S ribosomal protein S3
gi|300494812|gb|EFK29970.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045508|gb|ADN98051.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|334882662|emb|CCB83707.1| 30S ribosomal protein S3 [Lactobacillus pentosus MP-10]
gi|339637291|emb|CCC16190.1| 30S ribosomal protein S3 [Lactobacillus pentosus IG1]
gi|342241216|emb|CCC78450.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|376010171|gb|EHS83497.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|392436590|gb|EIW14499.1| SSU ribosomal protein S3p (S3e) [Lactobacillus pentosus KCA1]
gi|448274101|gb|AGE38620.1| 30S ribosomal protein S3 [Lactobacillus plantarum ZJ316]
Length = 217
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F A LNE L + LA+ S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFAAYLNEDLRIRKYIEQRLADASVSTVEIERAANRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N +E + L A ES+ +L G +A RRA
Sbjct: 81 SEVEALRKELNNLTGKRVHI--NIIE-----IKKPDLDAKLVGESIARQLEGRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M SGAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDG 170
>gi|296126871|ref|YP_003634123.1| 30S ribosomal protein S3 [Brachyspira murdochii DSM 12563]
gi|296018687|gb|ADG71924.1| ribosomal protein S3 [Brachyspira murdochii DSM 12563]
Length = 245
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDAALAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDG 155
A++ ++K+G
Sbjct: 179 IARTEQYKNG 188
>gi|224510697|pdb|3FIC|C Chain C, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
Length = 207
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRI 156
>gi|34811531|pdb|1PNS|C Chain C, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811587|pdb|1PNX|C Chain C, Crystal Structure Of The Wild Type Ribosome From E. Coli,
30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
Only Molecules Of The 30s Ribosomal Subunit. The 50s
Subunit Is In The Pdb File 1pny.
gi|56966325|pdb|1VOQ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966378|pdb|1VOS|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966431|pdb|1VOV|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966484|pdb|1VOX|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966537|pdb|1VOZ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|300508607|pdb|3MR8|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|300508662|pdb|3MS0|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (30s) And 3ms1 (50s).
gi|322812552|pdb|3PYN|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812605|pdb|3PYQ|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812658|pdb|3PYS|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812711|pdb|3PYU|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 206
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRI 156
>gi|46199624|ref|YP_005291.1| 30S ribosomal protein S3 [Thermus thermophilus HB27]
gi|55981655|ref|YP_144952.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
gi|381191145|ref|ZP_09898656.1| 30S ribosomal protein S3 [Thermus sp. RL]
gi|384431866|ref|YP_005641226.1| 30S ribosomal protein S3 [Thermus thermophilus SG0.5JP17-16]
gi|386359809|ref|YP_006058054.1| 30S ribosomal protein S3 [Thermus thermophilus JL-18]
gi|24212666|sp|P80372.3|RS3_THET8 RecName: Full=30S ribosomal protein S3
gi|50401227|sp|P62663.2|RS3_THET2 RecName: Full=30S ribosomal protein S3
gi|10835587|pdb|1FJG|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096396|pdb|1HR0|C Chain C, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399794|pdb|1HNW|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399816|pdb|1HNX|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399838|pdb|1HNZ|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278012|pdb|1GIX|F Chain F, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278058|pdb|1IBK|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278079|pdb|1IBL|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278103|pdb|1IBM|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826122|pdb|1JGO|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826147|pdb|1JGP|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826172|pdb|1JGQ|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|20663888|pdb|1J5E|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065878|pdb|1N32|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065905|pdb|1N33|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065932|pdb|1N34|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065958|pdb|1N36|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-cognate Transfer Rna Anticodon
Stem-loop Mismatched At The Second Codon Position
gi|28373701|pdb|1ML5|F Chain F, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177402|pdb|1XMO|C Chain C, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177425|pdb|1XMQ|C Chain C, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
Decoding Center
gi|58177466|pdb|1XNQ|C Chain C, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177489|pdb|1XNR|C Chain C, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
In The Context Of The Decoding Center
gi|66361056|pdb|1YL4|F Chain F, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192238|pdb|2B64|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Subunit, Trnas, Mrna And
Release Factor Rf1 From A Crystal Structure Of The Whole
Ribosomal Complex". The Entire Crystal Structure
Contains One 70s Ribosome, Trnas, Mrna And Release
Factor Rf1 And Is Described In Remark 400.
gi|88192301|pdb|2B9M|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Ribosomal Subunit, Trnas,
Mrna And Release Factor Rf2 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf2 And Is Described In Remark 400.
gi|88192357|pdb|2B9O|C Chain C, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s Subunit,
Trnas And Mrna From A Crystal Structure Of The Whole
Ribosomal Complex With A Stop Codon In The A-Site And Is
Described In Remark 400.
gi|110591325|pdb|2F4V|C Chain C, 30s Ribosome + Designer Antibiotic
gi|116667656|pdb|2HHH|C Chain C, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|116668199|pdb|2J00|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule I.
gi|116668260|pdb|2J02|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|119389714|pdb|2HGI|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
gi|119389771|pdb|2HGP|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
gi|119389827|pdb|2HGR|F Chain F, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149242710|pdb|2OW8|DD Chain d, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243620|pdb|2UU9|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-codon In The
A-site And Paromomycin.
gi|149243647|pdb|2UUA|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243674|pdb|2UUB|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243701|pdb|2UUC|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-codon In The
A-site And Paromomycin.
gi|149243840|pdb|2UXC|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Ucgu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836410|pdb|2UXB|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Gggu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836487|pdb|2V46|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836543|pdb|2V48|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430902|pdb|2UXD|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Cggg In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|160285941|pdb|2QNH|DD Chain d, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972851|pdb|2VQE|C Chain C, Modified Uridines With C5-methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-g
Wobble Pairing During Decoding
gi|186972874|pdb|2VQF|C Chain C, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156498|pdb|3D5A|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156554|pdb|3D5C|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|218766775|pdb|3F1E|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766831|pdb|3F1G|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|226887376|pdb|2WDG|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887401|pdb|2WDH|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887490|pdb|2WDK|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887547|pdb|2WDM|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823531|pdb|2WH1|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823590|pdb|2WH3|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome). This File Contains The
30s Subunit.
gi|260099988|pdb|3HUW|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule I.
gi|260100044|pdb|3HUY|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule Ii.
gi|261824486|pdb|2WRI|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of 4).
gi|261824548|pdb|2WRK|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of 4).
gi|261824610|pdb|2WRN|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824669|pdb|2WRQ|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307169|pdb|3KIQ|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307227|pdb|3KIS|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307285|pdb|3KIU|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307343|pdb|3KIX|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965606|pdb|3KNH|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule I
gi|289526684|pdb|3KNJ|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule Ii'
gi|289526709|pdb|3KNL|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526734|pdb|3KNN|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979506|pdb|3I8G|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979531|pdb|3I8H|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979590|pdb|3I9B|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979644|pdb|3I9D|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982077|pdb|2X9R|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982136|pdb|2X9T|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567964|pdb|2XFZ|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568022|pdb|2XG1|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|307776614|pdb|3OTO|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
Mutant Of Thermus Thermophilus (Hb8)
gi|309320237|pdb|3OGE|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320258|pdb|3OGY|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320339|pdb|3OHC|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320360|pdb|3OHD|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320441|pdb|3OHY|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320492|pdb|3OI0|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320543|pdb|3OI2|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320594|pdb|3OI4|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207675|pdb|2XQD|C Chain C, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754001|pdb|2XSY|C Chain C, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754116|pdb|2XUY|C Chain C, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533404|pdb|2Y0U|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533463|pdb|2Y0W|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533522|pdb|2Y0Y|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533581|pdb|2Y10|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533640|pdb|2Y12|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533699|pdb|2Y14|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533758|pdb|2Y16|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533817|pdb|2Y18|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|347948797|pdb|3ZVO|C Chain C, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
gi|374074265|pdb|3T1H|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aaa-Codon In The A-Site And Paromomycin
gi|374074290|pdb|3T1Y|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aag-Codon In The A-Site And Paromomycin
gi|374074507|pdb|3UXS|C Chain C, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|374074528|pdb|3UXT|C Chain C, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.'
gi|380764244|pdb|3TVF|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764269|pdb|3TVG|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764346|pdb|3UYD|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764402|pdb|3UYF|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764522|pdb|3UZ3|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764547|pdb|3UZ4|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764573|pdb|3UZ6|F Chain F, Structure Analysis Of Ribosomal Decoding. This Entry
Contains The 30s Ribosomal Subunit Of The First 70s
Molecule In The Asymmetric Unit For The Cognate Trna-Tyr
Complex
gi|380764599|pdb|3UZ7|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764719|pdb|3UZG|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764775|pdb|3UZI|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764830|pdb|3UZL|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
gi|380764856|pdb|3UZM|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
gi|381353090|pdb|4ABR|C Chain C, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
gi|381353194|pdb|4DH9|C Chain C, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|381353249|pdb|4DHB|C Chain C, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|388325945|pdb|3V22|C Chain C, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 1st Ribosome In The Asu
gi|388325998|pdb|3V24|C Chain C, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 2nd Ribosome In The Asu
gi|388326051|pdb|3V26|C Chain C, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 1st Ribosome In The Asu
gi|388326104|pdb|3V28|C Chain C, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 2nd Ribosome In The Asu
gi|388326227|pdb|3V2C|C Chain C, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 1st Ribosome In The Asu
gi|388326280|pdb|3V2E|C Chain C, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 2nd Ribosome In The Asu
gi|395759336|pdb|4AQY|C Chain C, Structure Of Ribosome-Apramycin Complexes
gi|414145509|pdb|4DR1|C Chain C, Crystal Structure Of The Apo 30s Ribosomal Subunit From
Thermus Thermophilus (hb8)
gi|414145530|pdb|4DR2|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Multiple Copies Of Paromomycin
Molecules Bound
gi|414145551|pdb|4DR3|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Streptomycin Bound
gi|414145572|pdb|4DR4|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Cognate Transfer Rna
Anticodon Stem-loop And Multiple Copies Of Paromomycin
Molecules Bound
gi|414145595|pdb|4DR5|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Cognate Transfer Rna Anticodon Stem-loop And
Streptomycin Bound
gi|414145618|pdb|4DR6|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Near-cognate Transfer Rna
Anticodon Stem-loop Mismatched At The First Codon
Position And Streptomycin Bound
gi|414145643|pdb|4DR7|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Near-cognate Transfer Rna Anticodon Stem-loop
Mismatched At The Second Codon Position, And
Streptomycin Bound
gi|451928691|pdb|4G5K|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928744|pdb|4G5M|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|451928797|pdb|4G5T|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928851|pdb|4G5V|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|453055751|pdb|4DUY|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c
gi|453055772|pdb|4DUZ|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c, Bound
With Streptomycin
gi|453055793|pdb|4DV0|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g
gi|453055814|pdb|4DV1|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g, Bound
With Streptomycin
gi|453055835|pdb|4DV2|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a
gi|453055856|pdb|4DV3|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a, Bound
With Streptomycin
gi|453055877|pdb|4DV4|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g
gi|453055898|pdb|4DV5|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g, Bound
With Streptomycin
gi|453055919|pdb|4DV6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g
gi|453055940|pdb|4DV7|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g, Bound
With Streptomycin
gi|13446666|emb|CAC35062.1| ribosomal protein S3 [Thermus thermophilus HB27]
gi|46197250|gb|AAS81664.1| SSU ribosomal protein S3P [Thermus thermophilus HB27]
gi|55773068|dbj|BAD71509.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
gi|333967334|gb|AEG34099.1| ribosomal protein S3 [Thermus thermophilus SG0.5JP17-16]
gi|380450934|gb|EIA38547.1| 30S ribosomal protein S3 [Thermus sp. RL]
gi|383508836|gb|AFH38268.1| ribosomal protein S3, bacterial type [Thermus thermophilus JL-18]
Length = 239
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 42 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 98
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 99 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRI 157
>gi|14278532|pdb|1I94|C Chain C, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278553|pdb|1I95|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278574|pdb|1I96|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278596|pdb|1I97|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|149241277|pdb|2E5L|C Chain C, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
The Shine- Dalgarno Interaction
gi|226887631|pdb|2ZM6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
Length = 238
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRI 156
>gi|433624386|ref|YP_007258016.1| 30S ribosomal protein S3 [Mycoplasma cynos C142]
gi|429534412|emb|CCP23914.1| 30S ribosomal protein S3 [Mycoplasma cynos C142]
Length = 216
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ ++I R +LG++G+ I+ELT +QK K + ++ L ++ L A AE
Sbjct: 64 KVTVLIHTVRPAAILGQEGKNIQELTVKIQKYVKNRKLNLNLQVLELKKPDLNAKLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYM 157
+ KL + R A +R M++GAKG + +VSG+L A+S + +G M
Sbjct: 124 IATKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEM 177
>gi|367470164|ref|ZP_09469880.1| SSU ribosomal protein S3p (S3e) [Patulibacter sp. I11]
gi|365814742|gb|EHN09924.1| SSU ribosomal protein S3p (S3e) [Patulibacter sp. I11]
Length = 281
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 17 FFAELNEVLTR---ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI----REL 69
F E ++ T +LA G S + +R E+ IR R V+G+ G + ++L
Sbjct: 31 FLDEDRQIRTHIQTKLAHAGLSDITIRKNKNEVEVSIRTARPGVVIGKSGVEVDALRKDL 90
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +K+ K N +E+ +++ + L A + AE L+ ++ A RRA L M S
Sbjct: 91 HRITKKQVKV--NILEVRRPELDAK-LVAQSVAEQLQNRV----AFRRAMKRALTSAMRS 143
Query: 130 GAKGCEVIVSGKL-RAQRAKSMKFKDG 155
GAKGC++ V G+L A+ +++ ++DG
Sbjct: 144 GAKGCKIQVGGRLGGAEMSRTESYQDG 170
>gi|406881487|gb|EKD29536.1| 30S ribosomal protein S3 [uncultured bacterium (gcode 4)]
Length = 210
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 42 TPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQ 101
T T I+I ++T VLG+ G + +L +QK F + ++V L A
Sbjct: 60 TDSETSIVIYTSKTAFVLGKNGENLTKLEEEIQKNF---PGKYAIEVKEVKKPELSASLV 116
Query: 102 AESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
A+S+ ++ L RR L ME G G +VI+SG+L A+ A++ +KDG
Sbjct: 117 ADSIARQIEKKLPYRRVVKNALVKTMEKGGLGIKVILSGRLNGAEIARTETYKDG 171
>gi|377556480|ref|ZP_09786185.1| 30S ribosomal protein S3 [Lactobacillus gastricus PS3]
gi|376168408|gb|EHS87182.1| 30S ribosomal protein S3 [Lactobacillus gastricus PS3]
Length = 214
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD + A LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDYAAYLNEDLRIREYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE + L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNALTGKRVHI--NVVE-----IKKPDLEAHLVGESVAQQLENRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG ++ V+G+L A ++ + DG
Sbjct: 134 RGAMQRAMRAGAKGIKIQVAGRLNGADMSRVESYSDG 170
>gi|290559289|gb|EFD92626.1| KH type 2 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 223
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V E L ++ G S +++ TP+ +III+ + ++ + +RE
Sbjct: 4 KKIITDKVNEESAREYLFKKFNRFGISDIKIEKTPLGMKIIIKTPKPGAIITRANQILRE 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ + + FK +E+ N IA + + + G + + + + IM
Sbjct: 64 SSKDLGEFFKQESPRIEVENSLDPNLDPAIIADSIAFKIAKFGPMKYKVVIHKAMDSIMA 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKD--GYMISSGQPVNEYIDSAVRHVLLRQVSLIFVM 186
+GAKG E+ + G ++ +RA KF+ M +GQ + +A + ++L++ S+ +
Sbjct: 124 AGAKGVEIEIGGVIK-ERAAHFKFRPIGSVMPKTGQVEFFGVRTAKKQLVLKRGSIGIKV 182
Query: 187 LISVPV 192
I VP
Sbjct: 183 TIVVPT 188
>gi|291296985|ref|YP_003508383.1| 30S ribosomal protein S3 [Meiothermus ruber DSM 1279]
gi|290471944|gb|ADD29363.1| ribosomal protein S3 [Meiothermus ruber DSM 1279]
Length = 253
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
++ +EL + G + +++ +++ A + V+G G I+ L +Q RF P +
Sbjct: 42 LIEKELHQAGLARIDIERAADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRF--PGKT 99
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V L ++V N L A A+ + ++ AVRR+ ++ + ESGA G +++VSG++
Sbjct: 100 VALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSGRI 158
>gi|104779761|ref|YP_606259.1| 30S ribosomal protein S3 [Pseudomonas entomophila L48]
gi|123381068|sp|Q1IFW0.1|RS3_PSEE4 RecName: Full=30S ribosomal protein S3
gi|95108748|emb|CAK13442.1| 30S ribosomal subunit protein S3 [Pseudomonas entomophila L48]
Length = 228
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLQTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREG 171
>gi|148545745|ref|YP_001265847.1| 30S ribosomal protein S3 [Pseudomonas putida F1]
gi|161378146|ref|NP_742626.2| 30S ribosomal protein S3 [Pseudomonas putida KT2440]
gi|167031506|ref|YP_001666737.1| 30S ribosomal protein S3 [Pseudomonas putida GB-1]
gi|170723900|ref|YP_001751588.1| 30S ribosomal protein S3 [Pseudomonas putida W619]
gi|325272013|ref|ZP_08138457.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
gi|339485393|ref|YP_004699921.1| 30S ribosomal protein S3 [Pseudomonas putida S16]
gi|386010119|ref|YP_005928396.1| protein RpsC [Pseudomonas putida BIRD-1]
gi|395446843|ref|YP_006387096.1| ribosomal protein S3 [Pseudomonas putida ND6]
gi|397696205|ref|YP_006534088.1| 30S ribosomal protein S3 [Pseudomonas putida DOT-T1E]
gi|398843898|ref|ZP_10601015.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM84]
gi|421524888|ref|ZP_15971509.1| 30S ribosomal protein S3 [Pseudomonas putida LS46]
gi|421528304|ref|ZP_15974871.1| 30S ribosomal protein S3 [Pseudomonas putida S11]
gi|431800513|ref|YP_007227416.1| 30S ribosomal protein S3 [Pseudomonas putida HB3267]
gi|34098362|sp|Q88QM9.2|RS3_PSEPK RecName: Full=30S ribosomal protein S3
gi|172048429|sp|A5VXQ3.1|RS3_PSEP1 RecName: Full=30S ribosomal protein S3
gi|148509803|gb|ABQ76663.1| SSU ribosomal protein S3P [Pseudomonas putida F1]
gi|166857994|gb|ABY96401.1| ribosomal protein S3 [Pseudomonas putida GB-1]
gi|169761903|gb|ACA75219.1| ribosomal protein S3 [Pseudomonas putida W619]
gi|313496825|gb|ADR58191.1| RpsC [Pseudomonas putida BIRD-1]
gi|324102844|gb|EGC00247.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
gi|338836236|gb|AEJ11041.1| ribosomal protein S3 [Pseudomonas putida S16]
gi|388560840|gb|AFK69981.1| ribosomal protein S3 [Pseudomonas putida ND6]
gi|397332935|gb|AFO49294.1| 30S ribosomal protein S3 [Pseudomonas putida DOT-T1E]
gi|398255130|gb|EJN40170.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM84]
gi|402214261|gb|EJT85591.1| 30S ribosomal protein S3 [Pseudomonas putida S11]
gi|402751351|gb|EJX11864.1| 30S ribosomal protein S3 [Pseudomonas putida LS46]
gi|430791278|gb|AGA71473.1| 30S ribosomal protein S3 [Pseudomonas putida HB3267]
Length = 228
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREG 171
>gi|24981839|gb|AAN66090.1|AE016238_8 ribosomal protein S3 [Pseudomonas putida KT2440]
Length = 237
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 31 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 90
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 91 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 147
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 148 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREG 180
>gi|402836649|ref|ZP_10885183.1| ribosomal protein S3 [Mogibacterium sp. CM50]
gi|402270568|gb|EJU19828.1| ribosomal protein S3 [Mogibacterium sp. CM50]
Length = 287
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 10 KFVADGVFFAEL----NEV---LTRELAEDGYSGVEV-RVTPVRTEIIIRATRTQNVLGE 61
K+ AD FA+ N+V + ++L G + V + R + +III R V+G
Sbjct: 21 KWYADKTNFADFLVEDNKVRNYVKKKLYAAGVASVVIERPAADKVKIIIATARPGMVIGR 80
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
G I EL + K +VE+ E+V L A AES+ L ++ RRA
Sbjct: 81 AGDGIDELKKSL---IKLTGKTVEISIEEVRRSELDAQLTAESIAQALERRVSFRRAMKS 137
Query: 122 VLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
++ +++GAKG +V+VSG+L A+ A+S K+ +G
Sbjct: 138 AIQRTVKAGAKGIKVLVSGRLGGAEIARSEKYSEG 172
>gi|406942220|gb|EKD74509.1| hypothetical protein ACD_44C00423G0009 [uncultured bacterium]
Length = 223
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 25 LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
+ +E A G S V ++ +II+ A R ++G+KG + + + V K P V
Sbjct: 42 IQKEWASAGISRVYIKRPAKNAQIIVYAARPGIIIGKKGEEVERVRAHVSKLMGIP---V 98
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL-R 143
L E+V L A AE++ +L + RRA + M SGAKG ++ VSG+L
Sbjct: 99 HLAIEEVRKPELDAKLVAETVAQQLEKRIMFRRAMKRAVTSAMRSGAKGIKINVSGRLGG 158
Query: 144 AQRAKSMKFKDG 155
A+ A++ +++G
Sbjct: 159 AEIARNEWYREG 170
>gi|308233858|ref|ZP_07664595.1| ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|328943566|ref|ZP_08241031.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|327491535|gb|EGF23309.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
Length = 236
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + LA S VE+ + +++I +R V+G+KG I +L VQK K
Sbjct: 38 EIRKYLKKRLASAALSRVEIERAGDKVKVVILTSRPGIVIGKKGTEIDDLRKDVQKIAKV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ V + ++ L A A+ + +L G +A RRA ++ ++GAKG + S
Sbjct: 98 GKGDVNVEVVEIKQPDLDAQLTADRIAEQLEGRVAFRRAVRKAVQGATKAGAKGIRIQCS 157
Query: 140 GKL 142
G+L
Sbjct: 158 GRL 160
>gi|406948557|gb|EKD79248.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 250
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
+L + G S VE+R + I IR ++ ++G G + EL ++++F F ++++
Sbjct: 46 KLRDGGVSRVEIRRANDQMNIHIRTSKPGVIIGRSGAGVEELKRQIKRQF-FGSEKMKIF 104
Query: 88 AE--KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
E +V N + A + + ++L + RRA + +M+ GAKG ++IVSG+L
Sbjct: 105 IEIEEVRNPDIDAELIMQGIVFQLEKRIPFRRAMKRAIEQVMQGGAKGVKIIVSGRL 161
>gi|269986910|gb|EEZ93186.1| KH type 2 domain protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 223
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K VA+ V E L ++ + G S + + TP+ +I+I+ + ++ + +RE
Sbjct: 4 KKIVANRVNDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILRE 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ + + F +E+ + N +A + + + G + + + + IM
Sbjct: 64 SSKELGEYFNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIMS 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKD--GYMISSGQPVNEYIDSAVRHVLLRQVSLIFVM 186
+GA+G E+ + G ++ +RA KF+ M +GQ + SA + ++L++ S+ +
Sbjct: 124 AGARGVEIEIGGVIK-ERAAHFKFRPTGSVMPKTGQVEFFGVRSAKKQLVLKRGSIGIKV 182
Query: 187 LISVPV 192
I VP
Sbjct: 183 TIVVPT 188
>gi|406969023|gb|EKD93749.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 226
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 25 LTRELAEDGY-SGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
R+ ++GY + +E+ RT +II +R V+G +G I + +++ F+ + S
Sbjct: 42 FVRKHFKEGYIAKIEILRDANRTTLIIHTSRPGTVIGRQGEGIEKFQEILEGMFRQQKFS 101
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
+ + +++ N L A AES+ ++ ++ RRA ++ ME+GAKG ++ V G+L
Sbjct: 102 ISV--KEIKNPDLDAYIVAESITKQIARRVSYRRAVKTAIQRGMENGAKGIKIGVKGRL 158
>gi|406875985|gb|EKD25679.1| ribosomal protein S3 [uncultured bacterium (gcode 4)]
Length = 222
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAED-----GYSGVEVRVTPVRTEIIIRATRTQ 56
A +K ++ AD FF E +V R+ +D G S V +R T EIII +++
Sbjct: 20 AEWFAKYKRTGAD--FFVE--DVKMRKFVDDTFGRSGISKVIIRKTAKEWEIIIFSSKVG 75
Query: 57 NVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
++G++ +I+E ++K+F +++ ++V L A AE + +L + R
Sbjct: 76 VLMGKQWEKIKEFEEALKKKF---NKDMKVVIKEVKIPELSAKIMAEFIASQLEARMPFR 132
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ VL+ +ME A G ++ V G+L ++S KF +G
Sbjct: 133 KVAKNVLQKVMEKWAAGIKIQVGGRLGWVDISRSEKFIEG 172
>gi|406910928|gb|EKD50831.1| hypothetical protein ACD_62C00417G0009 [uncultured bacterium]
Length = 209
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
+++ + L G S +E+ + +I I +R V+G+KG I +L + +QK +N
Sbjct: 40 KIIKKNLYSMGVSHIEMERAATKLKITIHTSRPGLVIGKKGSGIDQLRNDLQK---LTKN 96
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V L ++V L A AE++ +L +A RRA ++ M+ GA+G +V+ SG+L
Sbjct: 97 QVFLNIQEVRKAELDAQLVAENIALQLERRVAFRRAMKKSVQTTMKFGARGIKVMCSGRL 156
Query: 143 R-AQRAKSMKFKDG 155
A+ A+ +++G
Sbjct: 157 AGAEIARREWYREG 170
>gi|342210663|ref|ZP_08703419.1| 30S ribosomal protein S3 [Mycoplasma anatis 1340]
gi|341579159|gb|EGS29300.1| 30S ribosomal protein S3 [Mycoplasma anatis 1340]
Length = 217
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 37 VEVRVT-PVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
VEVR T + +I+ + +LG++G+ I ELT + K K +V + ++
Sbjct: 55 VEVRRTQDNKVTVIVHTAKPAAMLGQEGKNIAELTVKLTKSIKNKNLNVNIQVVELKKPD 114
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKD 154
L A AES+ KL + R A +R M SGAKG + VSG+L A++ + +
Sbjct: 115 LNARLLAESIAIKLENRESFRTAQKMAIRNAMRSGAKGIKTAVSGRLNGVDMARTEGYSE 174
Query: 155 GYM 157
G M
Sbjct: 175 GEM 177
>gi|284042810|ref|YP_003393150.1| 30S ribosomal protein S3 [Conexibacter woesei DSM 14684]
gi|283947031|gb|ADB49775.1| ribosomal protein S3 [Conexibacter woesei DSM 14684]
Length = 395
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 22 NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI----RELTSVVQKRF 77
N ++ R L+ G S + +R E+ I R V+G+ G + R+L + K+
Sbjct: 40 NHIVGR-LSHAGLSDITIRKNANEVEVNINTARPGIVIGKSGSEVDALRRDLHRITNKQV 98
Query: 78 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVI 137
K N +E+ +++ R L A + AE L+ ++ A RRA L M SGAKG +V
Sbjct: 99 KV--NILEIKRPELDAR-LVAQSIAEQLQNRV----AFRRAMKRALTSAMRSGAKGVKVQ 151
Query: 138 VSGKL-RAQRAKSMKFKDG 155
VSG+L A+ A++ + DG
Sbjct: 152 VSGRLGGAEMARTEGYSDG 170
>gi|291613242|ref|YP_003523399.1| 30S ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
gi|291583354|gb|ADE11012.1| ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
Length = 238
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 1 MATQISKKRKFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRAT 53
++ Q + K+ ++ F+EL + L ++LA G S + + +I I
Sbjct: 12 LSVQKNWTSKWYSNSKHFSELLLKDIEVRDYLKKKLAGAGVSKIVIERPAKNAKITIYTA 71
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
R V+G+KG I L + ++KR P+ V L E+V + A A+S+ +L +
Sbjct: 72 RPGVVIGKKGEDIESLRNELKKRMGLPD--VGLNIEEVRKPEVDAQLIADSITQQLEKRI 129
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDG 155
RRA ++ M GA+G +++ SG+L + A++ +++G
Sbjct: 130 MFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREG 172
>gi|257067054|ref|YP_003153310.1| 30S ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
gi|256798934|gb|ACV29589.1| ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
Length = 238
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD F++L +++ +E+ + G S +E+ +I + A + V+G+
Sbjct: 21 KWFADKKDFSDLLVEDYNIRKIVKKEVYDAGISDIEIERAVNNLKITVFAGKPGMVIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL ++K P + + E++ + L A AE++ +L +A RRA
Sbjct: 81 GSGVEELKKKLEKVA--PGRRIIINVEEIKYQDLSAQLVAENIANQLENRVAFRRAMKQS 138
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
++ M +GAKG + +VSG+L A A+S + +G
Sbjct: 139 MQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEG 172
>gi|320160420|ref|YP_004173644.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
gi|319994273|dbj|BAJ63044.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
Length = 225
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 25 LTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
L RE+AE+ G S VEV P + +I+ + ++G KG +++L ++
Sbjct: 42 LVREIAENAGVSRVEVERFPGKVRVIVFTAKPGILIGRKGESVKKLRQDLEA---LTGKK 98
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
++L +++ N A+ AE+L ++ ++ RRA L+ M GAKG +V V G+L
Sbjct: 99 IDLEIKEIKNPDTDALLVAENLASQIERRVSYRRAMKRALQQAMRQGAKGIKVEVQGRLS 158
Query: 144 -AQRAKSMKFKDG 155
A+ ++S+ ++G
Sbjct: 159 GAEMSRSVWLREG 171
>gi|429331932|ref|ZP_19212672.1| 30S ribosomal protein S3 [Pseudomonas putida CSV86]
gi|428763443|gb|EKX85618.1| 30S ribosomal protein S3 [Pseudomonas putida CSV86]
Length = 228
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L + A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREG 171
>gi|344941049|ref|ZP_08780337.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
gi|344262241|gb|EGW22512.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
Length = 223
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
+ + ++LA S +++ P I I R V+G+KG I L V K P
Sbjct: 41 DYIKKKLAHASVSRIQINRPPNNAHITIHTARPGIVIGKKGEDIEALRQAVSKIMGIP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V+L E++ L A AE + +L + RRA + M GA+G ++ V G+L
Sbjct: 99 -VQLNVEEIRKPELDAQLVAEGVAQQLEKRIMYRRAMKRAVTNTMRLGAEGIKINVGGRL 157
Query: 143 R-AQRAKSMKFKDG 155
A+ A+S +++G
Sbjct: 158 NGAEIARSEWYREG 171
>gi|238018629|ref|ZP_04599055.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
gi|237865100|gb|EEP66390.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
Length = 221
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + AI AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDAILVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GAKG +++VSG+L A+ A+S +++G
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREG 170
>gi|15805346|ref|NP_294040.1| 30S ribosomal protein S3 [Deinococcus radiodurans R1]
gi|27734542|sp|Q9RXJ6.1|RS3_DEIRA RecName: Full=30S ribosomal protein S3
gi|6457991|gb|AAF09898.1|AE001892_9 ribosomal protein S3 [Deinococcus radiodurans R1]
Length = 249
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ +++ ++LA G + +E+ + +II A + V+G+ G I+EL +++
Sbjct: 38 QIRQLINKKLAAAGIARIEIERAGQQVNVIISAAKPGVVIGKGGESIKELRGDIERLVS- 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V + ++ N + A A + ++ A RRA + +MESGA+G +VI+S
Sbjct: 97 -AGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A++A++ K +G
Sbjct: 156 GRLGGAEQARTEKVLEG 172
>gi|256847769|ref|ZP_05553214.1| ribosomal protein S3 [Lactobacillus coleohominis 101-4-CHN]
gi|256715458|gb|EEU30434.1| ribosomal protein S3 [Lactobacillus coleohominis 101-4-CHN]
Length = 219
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 10 KFVADGVFFAE-LNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD +AE LNE L + LA+ S +E+ R + I R V+G+
Sbjct: 21 KWYADKKHYAEYLNEDLRIRKYIEKRLADASVSTIEIERAANRVNVSIHTARPGMVIGKG 80
Query: 63 GRRIR----ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
G + EL + KR N VE + L A E++ +L +A RRA
Sbjct: 81 GSEVEALRLELNKLTGKRVHI--NVVE-----IKKPDLDAHLVGENVAQQLENRIAFRRA 133
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG ++ V+G+L A ++ + DG
Sbjct: 134 MRGAMQRAMRAGAKGIKIQVAGRLNGADMSRVESYSDG 171
>gi|259502537|ref|ZP_05745439.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
gi|259169489|gb|EEW53984.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
Length = 221
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFANYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVEIKKPD-----LDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDG 170
>gi|312870506|ref|ZP_07730625.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
gi|417886842|ref|ZP_12530986.1| ribosomal protein S3 [Lactobacillus oris F0423]
gi|311093968|gb|EFQ52293.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
gi|341593233|gb|EGS36090.1| ribosomal protein S3 [Lactobacillus oris F0423]
Length = 221
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFANYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVEIKKPD-----LDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDG 170
>gi|289209323|ref|YP_003461389.1| 30S ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
gi|288944954|gb|ADC72653.1| ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
Length = 226
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 11 FVADGVFFAE-------LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ ADG F E L E L ++LA S + + I I+ R V+G+KG
Sbjct: 22 WYADGREFGETLNNDIKLREFLQKKLAHASVSRISISRPAKAAHITIQTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I +L V + + +V++ E+V + A AE + +L + RRA +
Sbjct: 82 EDIEKLRQDVARETGLEKGTVKINIEEVRKPEIEAQLVAEGIAQQLERRIMFRRAMKRAV 141
Query: 124 RFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
M GA+G +V VSG+L A+ A+S +++G
Sbjct: 142 GNAMRLGAQGIKVHVSGRLNGAEIARSEWYREG 174
>gi|406994551|gb|EKE13532.1| hypothetical protein ACD_13C00010G0018 [uncultured bacterium]
Length = 217
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 1 MATQISKKRKFVADGVFFA-------ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRAT 53
+ T + K ++ AD F ++ E LT++L G +GVE+ P +II +
Sbjct: 12 VGTFLPWKSRWFADSASFKNFLIEDIKIREELTKKLKLAGVTGVEIERLPKSMVVIITVS 71
Query: 54 RTQNVLGEKGRRIRELTSVVQK------RFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
R V+G G I ++ + K + + +++ +V N L A A+ +
Sbjct: 72 RPGVVIGHGGTGIEDVKKFILKIMSDVRKKAVKDIKIDIRINEVKNPELSAYLVADRIAG 131
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNE 166
++ + RRA + +M GA G +V+++G++ A+ ++ F +G + Q + E
Sbjct: 132 EMERRIPHRRAVQKAIERVMAGGALGIKVVLAGRINGAEISRVETFHEGSV--PAQTLRE 189
Query: 167 YIDSAVRHVLLRQ 179
ID A LL++
Sbjct: 190 NIDYAQIPALLKR 202
>gi|148544690|ref|YP_001272060.1| 30S ribosomal protein S3 [Lactobacillus reuteri DSM 20016]
gi|184154043|ref|YP_001842384.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112]
gi|194466947|ref|ZP_03072934.1| ribosomal protein S3 [Lactobacillus reuteri 100-23]
gi|227363813|ref|ZP_03847920.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3]
gi|227543617|ref|ZP_03973666.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A]
gi|325683024|ref|ZP_08162540.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A]
gi|338202941|ref|YP_004649086.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112]
gi|423334758|ref|ZP_17312536.1| 30S ribosomal protein S3 [Lactobacillus reuteri ATCC 53608]
gi|172048239|sp|A5VLJ9.1|RS3_LACRD RecName: Full=30S ribosomal protein S3
gi|148531724|gb|ABQ83723.1| SSU ribosomal protein S3P [Lactobacillus reuteri DSM 20016]
gi|183225387|dbj|BAG25904.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112]
gi|194453983|gb|EDX42880.1| ribosomal protein S3 [Lactobacillus reuteri 100-23]
gi|227071170|gb|EEI09486.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3]
gi|227186457|gb|EEI66528.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A]
gi|324977374|gb|EGC14325.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A]
gi|336448181|gb|AEI56796.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112]
gi|337728279|emb|CCC03374.1| 30S ribosomal protein S3 [Lactobacillus reuteri ATCC 53608]
Length = 221
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFADYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVEIKKPD-----LDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRIESYSDG 170
>gi|118602219|ref|YP_903434.1| 30S ribosomal protein S3 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|152060901|sp|A1AVK6.1|RS3_RUTMC RecName: Full=30S ribosomal protein S3
gi|118567158|gb|ABL01963.1| SSU ribosomal protein S3P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 232
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
+ L +L S +++ +I I R ++G+KG I +L S+V K P
Sbjct: 41 DYLFDKLTNASVSRIQIERLANNAKITIHTARPGIIIGKKGADIEQLKSIVSKMMGIP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V + E++ L A AE++ +L + RRA VL GAKG +V+V+G+L
Sbjct: 99 -VHINIEEIKKPELDARLVAENIAQQLEKRVMYRRAVKRVLGNTTRLGAKGIKVMVNGRL 157
Query: 143 R-AQRAKSMKFKDG 155
A+ A+S +++G
Sbjct: 158 NGAEIARSEWYREG 171
>gi|366052606|ref|ZP_09450328.1| 30S ribosomal protein S3 [Lactobacillus suebicus KCTC 3549]
Length = 222
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F LNE L ++ LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYAEKDFATFLNEDLRIRKYISKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL S+ KR N VE + L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNSLTGKRVHI--NIVE-----IKKPDLDAHLVGESIARQLEARVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRAMRAGAKGVKTQVAGRLNGADMSRVETYADG 170
>gi|356960596|ref|ZP_09063578.1| SSU ribosomal protein S3P [gamma proteobacterium SCGC AAA001-B15]
Length = 230
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L +EL S + + +III R V+G+KG I L +V +
Sbjct: 38 EVRDYLFKELTSASVSRISIERLSNTAKIIIHTARPGIVIGKKGADIERLKKIVSAKMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E+V L A AE++ +L + RRA VL GA G +++VS
Sbjct: 98 P---VHISIEEVKQPELDARLVAENIAQQLEKRVMYRRAVKRVLGNATRLGALGIKIMVS 154
Query: 140 GKLR-AQRAKSMKFKDG 155
G+L A+ A+S +++G
Sbjct: 155 GRLNGAEIARSEWYREG 171
>gi|417002466|ref|ZP_11941849.1| ribosomal protein S3 [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479134|gb|EGC82231.1| ribosomal protein S3 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 238
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD F++L +++ +E+ + G + +E+ ++ + A + V+G+
Sbjct: 21 KWFADKKDFSDLLVEDYNIRKIVKKEVYDAGIADIEIERAVNNLKVTVFAGKPGMVIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL ++K P + + E++ + L A AE++ +L +A RRA
Sbjct: 81 GAGVEELKKKLEK--AAPGKRIIINVEEIKYQDLSAQLVAENIASQLENRVAFRRAMKQS 138
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
++ M +GAKG + +VSG+L A A+S + +G
Sbjct: 139 MQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEG 172
>gi|375091974|ref|ZP_09738261.1| ribosomal protein S3 [Helcococcus kunzii ATCC 51366]
gi|374562192|gb|EHR33524.1| ribosomal protein S3 [Helcococcus kunzii ATCC 51366]
Length = 240
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 10 KFVADGVFF----AELNEV---LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD F AE N++ + R + G S +++ T R ++ + + ++G+
Sbjct: 21 KWFADKKEFSKLLAEDNKIRNYVKRSQFQAGVSKIDIERTLNRIKVTVNTAKPGMIIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL + ++K K V + E+V N + A QAE + L + RRA
Sbjct: 81 GAGVEELKNALEKMTK---KQVIVNVEEVKNTAVNAQLQAERIASDLERRITFRRAMKQA 137
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
++ M++GAKG + VSG+L A A++ + +G
Sbjct: 138 IQTTMKAGAKGMKTQVSGRLGGADMARTEGYSEG 171
>gi|237751230|ref|ZP_04581710.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879]
gi|229372596|gb|EEO22987.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879]
Length = 229
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RKF+ +++A ++E++ +A ++RVT V A + ++G+KG I +
Sbjct: 40 RKFLKKELYYASVSEIIIERMA------TKLRVTVV-------AAKPGLIIGKKGADIEK 86
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ ++K V + ++V A AES+ +L +A RRA V++ M+
Sbjct: 87 VKETLRK---LVNKDVAINIKEVKRAQANAQLAAESVAMQLERRVAFRRAMKKVMQQAMK 143
Query: 129 SGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
SGAKG +V VSG+L A+ A++ + +G
Sbjct: 144 SGAKGIKVKVSGRLAGAEMARTEWYMEG 171
>gi|406994603|gb|EKE13584.1| hypothetical protein ACD_13C00010G0070 [uncultured bacterium]
Length = 217
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 1 MATQISKKRKFVADGVFFAE-------LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRAT 53
+ T + K ++ AD F + + + LT++L G +GVE+ +P + I +
Sbjct: 12 IGTFLPWKSRWFADNNSFKQFLIEDIRIRKELTKKLKLAGITGVEIERSPKSIVVTITVS 71
Query: 54 RTQNVLGEKGRRIRE--------LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
R V+G G I + + V +K K + +++ +V + L A AE +
Sbjct: 72 RPGVVIGRGGTGIEDVKKYILGIMNDVRKKTVK--DLKIDIRINEVKSPELSAYLVAERI 129
Query: 106 RYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPV 164
++ + RRA + +M SGA G +V+++G++ A+ ++ KF G + S Q +
Sbjct: 130 VSEMERRIPHRRAVQKAIERVMASGALGIKVVLAGRINGAEISRVEKFHQGSVPS--QTL 187
Query: 165 NEYIDSAVRHVLLRQ 179
E ID A LL++
Sbjct: 188 RENIDYAQVPALLKR 202
>gi|254237120|ref|ZP_04930443.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa C3719]
gi|126169051|gb|EAZ54562.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa C3719]
Length = 193
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 9 RKFVADGVFFAELN--EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
RK AD FA+L E L +L S +++ I I R V+G+KG +
Sbjct: 26 RKNYAD-YLFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDV 84
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+L + K+ P V + E++ L A+ A+S+ +L + RRA ++
Sbjct: 85 EKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNA 141
Query: 127 MESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 142 MRIGAKGIKIQVSGRLGGAEIARTEWYREG 171
>gi|406927322|gb|EKD63365.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 250
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF-- 77
++ E + + L + G S +++ T I I + + ++G +G +I + ++K+F
Sbjct: 38 KIKEYIRKTLKDSGVSAIQILRNANETIINIHSAKPGVIIGHQGEQIEKFREDLEKKFGS 97
Query: 78 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVI 137
+F N VE + L A AES+ ++ ++ R+ ++ M++GAKG +V
Sbjct: 98 RFQINIVE-----IQKPDLDAQLAAESIARQVEKRISYRKGAKMTIQKAMDAGAKGAKVF 152
Query: 138 VSGKLRA-QRAKSMKFKDG 155
V+G+L + A+ F +G
Sbjct: 153 VTGRLNGVEIARDETFTEG 171
>gi|384108307|ref|ZP_10009202.1| ribosomal protein S3, bacterial type [Treponema sp. JC4]
gi|383870774|gb|EID86375.1| ribosomal protein S3, bacterial type [Treponema sp. JC4]
Length = 245
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
+EL E ++AE +E+ P R I+I R ++G KG I ++++ +QK+
Sbjct: 42 LVSELPECKNADIAE-----IEIVRHPQRVTIVIHTARPGVIIGVKGASIEKISADIQKQ 96
Query: 77 FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
V++ +++ L A A+++ +L G + R+A + M +GA+G +V
Sbjct: 97 L---TKKVQIKIKEIKRADLNASLIAQNIGRQLSGRGSFRKAMKQAVSNAMRAGAQGIKV 153
Query: 137 IVSGKL-RAQRAKSMKFKDG 155
VSG+L A +++ + K+G
Sbjct: 154 RVSGRLGGADMSRTEEHKEG 173
>gi|313893202|ref|ZP_07826779.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
gi|313442555|gb|EFR60970.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
Length = 221
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDATLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GAKG +++VSG+L A+ A+S +++G
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREG 170
>gi|269798544|ref|YP_003312444.1| 30S ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282849870|ref|ZP_06259253.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294792800|ref|ZP_06757947.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
gi|294794554|ref|ZP_06759690.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|417000155|ref|ZP_11940476.1| ribosomal protein S3 [Veillonella parvula ACS-068-V-Sch12]
gi|269095173|gb|ACZ25164.1| ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282580307|gb|EFB85707.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294454884|gb|EFG23257.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|294456699|gb|EFG25062.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
gi|333976236|gb|EGL77106.1| ribosomal protein S3 [Veillonella parvula ACS-068-V-Sch12]
Length = 222
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDATLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GAKG +++VSG+L A+ A+S +++G
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREG 170
>gi|374852498|dbj|BAL55430.1| 30S ribosomal protein S3 [uncultured beta proteobacterium]
Length = 255
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
+I I R V+G+KG I +L + +R P ++ E+V L A AES+
Sbjct: 65 KITIHTARPGVVIGKKGEDIEKLRQEISERLGIP---AQVAIEEVRKPELDAQLVAESIA 121
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
+L + RRA ++ M GAKG +V+ SG+L A+ A+S +++G
Sbjct: 122 NQLEKRIQFRRAMKRAMQSAMRLGAKGIKVMTSGRLNGAEIARSEWYREG 171
>gi|160881779|ref|YP_001560747.1| 30S ribosomal protein S3 [Clostridium phytofermentans ISDg]
gi|189044971|sp|A9KJI8.1|RS3_CLOPH RecName: Full=30S ribosomal protein S3
gi|160430445|gb|ABX44008.1| ribosomal protein S3 [Clostridium phytofermentans ISDg]
Length = 219
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 25 LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
L ++L G + +E+ + ++II + V+G+ G I +L + + + +
Sbjct: 42 LKKKLYSAGVAKIEIERASDKLKVIIHTAKPGVVIGKGGAEIEKLKVEITQ---YTTKKL 98
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
L +++ +CA AES+ +L ++ RRA + M SGAKG + VSG+L
Sbjct: 99 NLEIKEIKKPDVCAQLVAESIAAQLENRISFRRAMKSTMSRTMRSGAKGIKTAVSGRL 156
>gi|15599453|ref|NP_252947.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|107103770|ref|ZP_01367688.1| hypothetical protein PaerPA_01004841 [Pseudomonas aeruginosa PACS2]
gi|116052292|ref|YP_788862.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152987607|ref|YP_001346229.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218889415|ref|YP_002438279.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|296387186|ref|ZP_06876685.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAb1]
gi|313111411|ref|ZP_07797216.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
gi|355652608|ref|ZP_09056868.1| 30S ribosomal protein S3 [Pseudomonas sp. 2_1_26]
gi|386056742|ref|YP_005973264.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa M18]
gi|386068404|ref|YP_005983708.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCGM2.S1]
gi|392982085|ref|YP_006480672.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa DK2]
gi|416860418|ref|ZP_11914257.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 138244]
gi|416877964|ref|ZP_11920095.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 152504]
gi|418587988|ref|ZP_13152006.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P1]
gi|418589188|ref|ZP_13153116.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P2]
gi|419756646|ref|ZP_14282991.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PADK2_CF510]
gi|420137284|ref|ZP_14645274.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CIG1]
gi|421151765|ref|ZP_15611367.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 14886]
gi|421157752|ref|ZP_15617097.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 25324]
gi|421165614|ref|ZP_15623936.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 700888]
gi|421172458|ref|ZP_15630228.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CI27]
gi|421178591|ref|ZP_15636201.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa E2]
gi|421518807|ref|ZP_15965481.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO579]
gi|424938879|ref|ZP_18354642.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCMG1179]
gi|451982938|ref|ZP_21931236.1| SSU ribosomal protein S3p (S3e) [Pseudomonas aeruginosa 18A]
gi|452877877|ref|ZP_21955126.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa VRFPA01]
gi|27734535|sp|Q9HWE1.1|RS3_PSEAE RecName: Full=30S ribosomal protein S3
gi|122261441|sp|Q02T74.1|RS3_PSEAB RecName: Full=30S ribosomal protein S3
gi|171460872|sp|A6UZJ4.1|RS3_PSEA7 RecName: Full=30S ribosomal protein S3
gi|9950474|gb|AAG07645.1|AE004841_23 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|115587513|gb|ABJ13528.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|150962765|gb|ABR84790.1| ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218769638|emb|CAW25398.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|310883718|gb|EFQ42312.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
gi|334837550|gb|EGM16307.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 138244]
gi|334838983|gb|EGM17683.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 152504]
gi|346055325|dbj|GAA15208.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCMG1179]
gi|347303048|gb|AEO73162.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa M18]
gi|348036963|dbj|BAK92323.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCGM2.S1]
gi|354823946|gb|EHF08209.1| 30S ribosomal protein S3 [Pseudomonas sp. 2_1_26]
gi|375041227|gb|EHS33937.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051950|gb|EHS44411.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P2]
gi|384396401|gb|EIE42819.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PADK2_CF510]
gi|392317590|gb|AFM62970.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa DK2]
gi|403249930|gb|EJY63396.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CIG1]
gi|404348289|gb|EJZ74638.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO579]
gi|404526637|gb|EKA36839.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 14886]
gi|404537724|gb|EKA47307.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CI27]
gi|404541176|gb|EKA50544.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 700888]
gi|404548195|gb|EKA57159.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa E2]
gi|404550277|gb|EKA59038.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 25324]
gi|451759407|emb|CCQ83759.1| SSU ribosomal protein S3p (S3e) [Pseudomonas aeruginosa 18A]
gi|452185433|gb|EME12451.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa VRFPA01]
gi|453042436|gb|EME90180.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA21_ST175]
Length = 228
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 9 RKFVADGVFFAELN--EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
RK AD FA+L E L +L S +++ I I R V+G+KG +
Sbjct: 26 RKNYAD-YLFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDV 84
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+L + K+ P V + E++ L A+ A+S+ +L + RRA ++
Sbjct: 85 EKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNA 141
Query: 127 MESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 142 MRIGAKGIKIQVSGRLGGAEIARTEWYREG 171
>gi|71894647|ref|YP_278755.1| 30S ribosomal protein S3 [Mycoplasma synoviae 53]
gi|91207820|sp|Q4A5C7.1|RS3_MYCS5 RecName: Full=30S ribosomal protein S3
gi|71851435|gb|AAZ44044.1| 30S ribosomal protein S3 [Mycoplasma synoviae 53]
Length = 226
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ + + ++ +LGE G I+ LT +QK K + V L + L A AE
Sbjct: 64 KVSVFLHTSKPAAILGENGTNIKNLTVALQKHLKNKKLDVNLKVLTIKEPDLNARLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYM 157
+ KL + R A +R +++GAKG + VSG+L A++ + +G M
Sbjct: 124 IATKLENRESFRSAQKIAIRSALKAGAKGIKTAVSGRLNGVDMARTEGYSEGEM 177
>gi|34558021|ref|NP_907836.1| 30S ribosomal protein S3 [Wolinella succinogenes DSM 1740]
gi|61215661|sp|Q7M8E0.1|RS3_WOLSU RecName: Full=30S ribosomal protein S3
gi|34483739|emb|CAE10736.1| 30S RIBOSOMAL PROTEIN S3 [Wolinella succinogenes]
Length = 236
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
++ K RKF+ +++A ++E++ A+ ++RVT V A R ++G+K
Sbjct: 34 SEDHKIRKFLKKELYYAGVSEIIIERTAK------KLRVTVV-------AARPGIIIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I +L ++K + + + ++V A AE++ +L +A RRA V
Sbjct: 81 GADIEKLKEALKK---IVDKEISINIKEVKRPQANAQLAAENVTMQLERRVAFRRAMKKV 137
Query: 123 LRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
++ M++GAKG ++ VSG+L A+ A++ + +G
Sbjct: 138 MQAAMKAGAKGIKIKVSGRLAGAEMARTEWYMEG 171
>gi|224373643|ref|YP_002608015.1| 30S ribosomal protein S3 [Nautilia profundicola AmH]
gi|254764538|sp|B9L6M7.1|RS3_NAUPA RecName: Full=30S ribosomal protein S3
gi|223589411|gb|ACM93147.1| ribosomal protein S3 [Nautilia profundicola AmH]
Length = 240
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
EL + L ++L G S + + T + I I A + ++G+ G I L + +QKR
Sbjct: 38 ELRKFLKKKLYYAGISDIIIERTAKKIRITIFAAKPGIIIGKGGSEIEALKAELQKRIGN 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
E + + E+ L A AE++ ++ +A RRA V++ ++SGAKG +V V+
Sbjct: 98 KELILNIKEERKPQ--LSAQLAAENVATQIERRVAFRRAMKKVIQSALKSGAKGIKVQVA 155
Query: 140 GKLR-AQRAKSMKFKDG 155
G+L A+ A++ + +G
Sbjct: 156 GRLNGAEMARTEWYLEG 172
>gi|146281176|ref|YP_001171329.1| 30S ribosomal protein S3 [Pseudomonas stutzeri A1501]
gi|339492753|ref|YP_004713046.1| 30S ribosomal protein S3 [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386019357|ref|YP_005937381.1| 30S ribosomal protein S3 [Pseudomonas stutzeri DSM 4166]
gi|392422656|ref|YP_006459260.1| 30S ribosomal protein S3 [Pseudomonas stutzeri CCUG 29243]
gi|409398065|ref|ZP_11248917.1| 30S ribosomal protein S3 [Pseudomonas sp. Chol1]
gi|419954727|ref|ZP_14470863.1| 30S ribosomal protein S3 [Pseudomonas stutzeri TS44]
gi|421616497|ref|ZP_16057504.1| 30S ribosomal protein S3 [Pseudomonas stutzeri KOS6]
gi|431928684|ref|YP_007241718.1| 30S ribosomal protein S3 [Pseudomonas stutzeri RCH2]
gi|452750457|ref|ZP_21950206.1| 30S ribosomal protein S3 [Pseudomonas stutzeri NF13]
gi|152060896|sp|A4VHN6.1|RS3_PSEU5 RecName: Full=30S ribosomal protein S3
gi|145569381|gb|ABP78487.1| ribosomal protein S3 [Pseudomonas stutzeri A1501]
gi|327479329|gb|AEA82639.1| 30S ribosomal protein S3 [Pseudomonas stutzeri DSM 4166]
gi|338800125|gb|AEJ03957.1| 30S ribosomal protein S3 [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|387968591|gb|EIK52880.1| 30S ribosomal protein S3 [Pseudomonas stutzeri TS44]
gi|390984844|gb|AFM34837.1| 30S ribosomal protein S3 [Pseudomonas stutzeri CCUG 29243]
gi|409117571|gb|EKM93999.1| 30S ribosomal protein S3 [Pseudomonas sp. Chol1]
gi|409781541|gb|EKN61132.1| 30S ribosomal protein S3 [Pseudomonas stutzeri KOS6]
gi|431826971|gb|AGA88088.1| SSU ribosomal protein S3P [Pseudomonas stutzeri RCH2]
gi|452005714|gb|EMD97997.1| 30S ribosomal protein S3 [Pseudomonas stutzeri NF13]
Length = 228
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ RE +D V R+ P +T I I R V+G+KG
Sbjct: 22 WYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREG 171
>gi|386817422|ref|ZP_10104640.1| SSU ribosomal protein S3P [Thiothrix nivea DSM 5205]
gi|386421998|gb|EIJ35833.1| SSU ribosomal protein S3P [Thiothrix nivea DSM 5205]
Length = 230
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 10 KFVADGVFFA-------ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ A+G +A E+ L ++L E S +++ I I R V+G+K
Sbjct: 21 KWYAEGKDYADFLHKDLEVRSFLKKKLKEASVSRIQIERPAKSAFITIHTARPGVVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I +L + + N+V+L E++ L A AES+ +L + RRA
Sbjct: 81 GEDIEKLRAETASKLGLHVNNVKLNIEEIRKPELDAQLVAESIASQLECRIMFRRAMKRA 140
Query: 123 LRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
+ M GA G +V V+G+L A+ A++ +++G
Sbjct: 141 VSNAMRLGALGVKVSVAGRLNGAEIARTEWYREG 174
>gi|418292894|ref|ZP_12904824.1| 30S ribosomal protein S3 [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379064307|gb|EHY77050.1| 30S ribosomal protein S3 [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 228
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 11 FVADG-----VFFAELN--EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ ADG A+LN E L +L S +++ I I R V+G+KG
Sbjct: 22 WYADGRTYANYLLADLNVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M GAKG ++ VSG+L A+ A++ +++G
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREG 171
>gi|365841075|ref|ZP_09382230.1| ribosomal protein S3 [Anaeroglobus geminatus F0357]
gi|364559167|gb|EHM37159.1| ribosomal protein S3 [Anaeroglobus geminatus F0357]
Length = 194
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ + A LNE L ++L G S +E+ + R ++II + V+G G
Sbjct: 21 KWYAEKDYAALLNEDVKIREFLKKQLYIAGVSRIEIERSAKRIKLIIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ +++ F + +V++ ++ L A AE++ +L + RRA +
Sbjct: 81 AGIEDIKKALKR---FTDKTVDVNIAEIKQSELDATLVAENVAGQLERRIGFRRAMKQSI 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GA+G +++ SG+L A+ A+S +DG
Sbjct: 138 GRTMRMGAQGIKIMCSGRLGGAEIARSESVRDG 170
>gi|406915550|gb|EKD54621.1| hypothetical protein ACD_60C00063G0026 [uncultured bacterium]
Length = 228
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L +LA+ G S +++ +I + R ++G+ G+ + L + K K
Sbjct: 38 KVREYLYEKLAQAGISRIQIDRPARNAKITVYTARPGVIIGKSGKEVETLRDEINKILKV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E+V L A AE++ +L + RRA V+ M GAKG ++ VS
Sbjct: 98 P---VHVSIEEVRKPELDAKLVAEAVAQQLEKRVMFRRAMKRVVTTAMRLGAKGIKICVS 154
Query: 140 GKLRAQR-AKSMKFKDG 155
G+L A+S +++G
Sbjct: 155 GRLGGTEIARSEWYREG 171
>gi|227530211|ref|ZP_03960260.1| 30S ribosomal protein S3 [Lactobacillus vaginalis ATCC 49540]
gi|227349886|gb|EEJ40177.1| 30S ribosomal protein S3 [Lactobacillus vaginalis ATCC 49540]
Length = 219
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYAEKDFANYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVEIKKPD-----LDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M +GAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDG 170
>gi|242309325|ref|ZP_04808480.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
gi|239523896|gb|EEQ63762.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
Length = 235
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 17/148 (11%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RKF+ +++A ++++L A +VRVT V A R ++G+KG + +
Sbjct: 40 RKFLKKELYYAGVSDILIERTAR------KVRVTVV-------AARPGIIIGKKGADVEK 86
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L ++K + L ++V A AES+ +L +A RRA V++ M+
Sbjct: 87 LKESLKK---IVNKDIFLNIKEVKKPQSNAQLSAESVATQLERRVAFRRAMKKVMQGAMK 143
Query: 129 SGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
SGAKG +V VSG+L A+ A++ + +G
Sbjct: 144 SGAKGIKVKVSGRLAGAEMARTEWYMEG 171
>gi|257456898|ref|ZP_05622079.1| ribosomal protein S3 [Treponema vincentii ATCC 35580]
gi|257445607|gb|EEV20669.1| ribosomal protein S3 [Treponema vincentii ATCC 35580]
Length = 246
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 37 VEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGL 96
+E+ P R I+I R ++G KG I ++ +++QK V++ ++V L
Sbjct: 57 IEIIRHPQRVTIVIHTARPGVIIGTKGANIEKIGAIIQKEL---NKKVQIKIKEVKRAEL 113
Query: 97 CAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
A A+++ +L+G + R+A M++GA+G ++ VSG+L A+ +++ + K+G
Sbjct: 114 NASLVAQNVARQLMGRASFRKALKQGCFSTMKAGAQGIKIRVSGRLGGAEMSRTEEMKEG 173
>gi|342214879|ref|ZP_08707550.1| ribosomal protein S3 [Veillonella sp. oral taxon 780 str. F0422]
gi|341590410|gb|EGS33653.1| ribosomal protein S3 [Veillonella sp. oral taxon 780 str. F0422]
Length = 221
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F + L+E L + L G S +E+ T R ++ I + V+G+ G
Sbjct: 21 KWYADKDFASNLHEDVKIRTFLKKTLFIAGISRIEIERTNKRIKVTIHTAKPGMVIGKGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I ++ +++ F + +++ ++ + A AES+ +L ++ RRA +
Sbjct: 81 QGIEDIRKELKR---FTDKQIDVNIAEIKQVDMEAQLVAESIASQLERRVSFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GA G +V+VSG+L A+ A+S +++G
Sbjct: 138 GRTMRLGANGIKVMVSGRLGGAEIARSESYREG 170
>gi|153869561|ref|ZP_01999135.1| 30S ribosomal protein S3 [Beggiatoa sp. PS]
gi|152073947|gb|EDN70859.1| 30S ribosomal protein S3 [Beggiatoa sp. PS]
Length = 211
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 38 EVRVT-PVRT-EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
EVR+ P R III R V+G+KG I +L ++V K P V + E++
Sbjct: 54 EVRIERPARNARIIIHTARPGIVIGKKGEDIDKLRAIVSKMMGIP---VHISVEEIRKPE 110
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKD 154
L A A S+ +L + RRA V+ M GA+G + VSG+L A+ A++ +++
Sbjct: 111 LDAYLVAVSVASQLERRIMFRRAMKRVVGNAMRLGAQGIRINVSGRLNGAEIARTEWYRE 170
Query: 155 G 155
G
Sbjct: 171 G 171
>gi|116334263|ref|YP_795790.1| 30S ribosomal protein S3 [Lactobacillus brevis ATCC 367]
gi|122269055|sp|Q03PW3.1|RS3_LACBA RecName: Full=30S ribosomal protein S3
gi|116099610|gb|ABJ64759.1| SSU ribosomal protein S3P [Lactobacillus brevis ATCC 367]
Length = 219
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 10 KFVADGVFFAELNEVLT------RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F A L E L + L + S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFAAYLKEDLQIRKFIEKRLVDASVSTVEIERAANRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE + L A E++ +L G +A RRA
Sbjct: 81 SEVENLRKELNDLTGKRVHI--NIVE-----IKKPDLDAKLVGENIARQLEGRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKL 142
G ++ M SGAKG + V+G+L
Sbjct: 134 RGTMQRTMRSGAKGIKTQVAGRL 156
>gi|149192563|ref|ZP_01870730.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
gi|148833604|gb|EDL50674.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
Length = 232
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + ++F DG F ++ + LT+ELA+ S + + + I R V+
Sbjct: 20 ATWFANTKEFADNLDGDF--KVRQFLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
A +R GAKG +V VSG+L A+ A+S +++G
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREG 171
>gi|253995724|ref|YP_003047788.1| 30S ribosomal protein S3 [Methylotenera mobilis JLW8]
gi|253982403|gb|ACT47261.1| ribosomal protein S3 [Methylotenera mobilis JLW8]
Length = 240
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S + + +I I + R V+G+KG I L S +Q
Sbjct: 38 KVREFLNKKLASAAVSRIMIERPAKNAKITIYSARPGVVIGKKGEDIESLRSSLQGLMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V L E+V L A A+S+ +L + RRA ++ M GA+G +++ S
Sbjct: 98 P---VHLNIEEVRKPELDATLIAQSIAQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSS 154
Query: 140 GKLRA-QRAKSMKFKDG 155
G+L + A++ +++G
Sbjct: 155 GRLNGIEIARTEWYREG 171
>gi|269837072|ref|YP_003319300.1| 30S ribosomal protein S3 [Sphaerobacter thermophilus DSM 20745]
gi|269786335|gb|ACZ38478.1| ribosomal protein S3 [Sphaerobacter thermophilus DSM 20745]
Length = 224
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 10 KFVADGVFFAELNEVLT------RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ + +L+E LT EL G S +E+ R E+ I ++ V+G++G
Sbjct: 21 KWYAERNYTEQLHEDLTIRRLINAELTRAGISRIEIERAANRIEVTIHTSKPGIVIGKQG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ + +++++ V L E++ + L A AES+ ++ ++ RRA
Sbjct: 81 ANVERIRQLIEQQVG---KKVHLKIEEIKDPELDARLIAESIAEQISRRVSFRRAMKHAA 137
Query: 124 RFIMESGAKGCEVIVSGKL 142
M GAKG ++ +SG+L
Sbjct: 138 TQAMRKGAKGVKIRLSGRL 156
>gi|153210013|ref|ZP_01947564.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154706269|ref|YP_001425176.1| 30S ribosomal protein S3 [Coxiella burnetii Dugway 5J108-111]
gi|161830479|ref|YP_001596191.1| 30S ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165924132|ref|ZP_02219964.1| ribosomal protein S3 [Coxiella burnetii Q321]
gi|212213244|ref|YP_002304180.1| 30S ribosomal protein S3 [Coxiella burnetii CbuG_Q212]
gi|212218080|ref|YP_002304867.1| 30S ribosomal protein S3 [Coxiella burnetii CbuK_Q154]
gi|189044972|sp|A9KD25.1|RS3_COXBN RecName: Full=30S ribosomal protein S3
gi|189044973|sp|A9NAN0.1|RS3_COXBR RecName: Full=30S ribosomal protein S3
gi|226697691|sp|B6J5D8.1|RS3_COXB1 RecName: Full=30S ribosomal protein S3
gi|226697692|sp|B6J257.1|RS3_COXB2 RecName: Full=30S ribosomal protein S3
gi|120575196|gb|EAX31820.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154355555|gb|ABS77017.1| SSU ribosomal protein S3P [Coxiella burnetii Dugway 5J108-111]
gi|161762346|gb|ABX77988.1| ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165916414|gb|EDR35018.1| ribosomal protein S3 [Coxiella burnetii Q321]
gi|212011654|gb|ACJ19035.1| SSU ribosomal protein S3P [Coxiella burnetii CbuG_Q212]
gi|212012342|gb|ACJ19722.1| SSU ribosomal protein S3P [Coxiella burnetii CbuK_Q154]
Length = 227
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFAE-LNEVLT-RELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ AD FA+ LNE L R+L + G V R+ P R +III + R ++G+KG
Sbjct: 22 WYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I L + K K P V + E+V L A AE++ +L + RRA +
Sbjct: 82 GEIEALRDEISKVMKVP---VHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ + GA G ++ VSG+L A+ A++ +++G
Sbjct: 139 QNTLRQGALGVKISVSGRLGGAEIARTEWYREG 171
>gi|325282646|ref|YP_004255187.1| 30S ribosomal protein S3 [Deinococcus proteolyticus MRP]
gi|324314455|gb|ADY25570.1| ribosomal protein S3 [Deinococcus proteolyticus MRP]
Length = 259
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 21/146 (14%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ +++ +EL G + +E+ + +II A + V+G+ G I+ + +
Sbjct: 38 KIRQLVHKELQAAGIARIEIERAGQQINVIISAAKPGIVIGKGGESIKAIRQSI------ 91
Query: 80 PENSVELYAEKVN---------NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
EN VE VN + L A+ AE + + A RRA + +MESG
Sbjct: 92 -ENMVEAGTVAVNVAEIPNPNTSAPLVALRIAEQIERRF----AFRRAMKQAAQRVMESG 146
Query: 131 AKGCEVIVSGKL-RAQRAKSMKFKDG 155
A+GC+VI+SG+L A++A++ K +G
Sbjct: 147 ARGCKVILSGRLGGAEQARTEKVLEG 172
>gi|72163039|ref|YP_290696.1| 30S ribosomal protein S3 [Thermobifida fusca YX]
gi|91207846|sp|Q47LJ9.1|RS3_THEFY RecName: Full=30S ribosomal protein S3
gi|71916771|gb|AAZ56673.1| SSU ribosomal protein S3P [Thermobifida fusca YX]
Length = 270
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ ++LTR + G S VE+ T R + + R V+G +G + + ++K
Sbjct: 38 IRQMLTRGMERAGISKVEIERTRERVRVDVHTARPGIVIGRRGAEADRIRANLEK---LT 94
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
V+L +V N + A A+ + +L +A RRA ++ M+SGAKG V SG
Sbjct: 95 NKQVQLNILEVKNPEIDAQLVAQGVAEQLSSRVAFRRAMRKAIQSAMKSGAKGIRVQCSG 154
Query: 141 KL-RAQRAKSMKFKDG 155
+L A+ ++S +++G
Sbjct: 155 RLGGAEMSRSEFYREG 170
>gi|303230141|ref|ZP_07316910.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
gi|303231249|ref|ZP_07317987.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|401680975|ref|ZP_10812884.1| ribosomal protein S3 [Veillonella sp. ACP1]
gi|429760920|ref|ZP_19293368.1| ribosomal protein S3 [Veillonella atypica KON]
gi|302514156|gb|EFL56160.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|302515202|gb|EFL57175.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
gi|400218030|gb|EJO48916.1| ribosomal protein S3 [Veillonella sp. ACP1]
gi|429176108|gb|EKY17509.1| ribosomal protein S3 [Veillonella atypica KON]
Length = 221
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYAEKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A+ AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDAVLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GAKG +++VSG+L A+ A+S +++G
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREG 170
>gi|254455646|ref|ZP_05069075.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
gi|207082648|gb|EDZ60074.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
Length = 226
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 6 SKKRKFVADGVFFAE---LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+KK+ F G + E + E + + + G S V + T + + I +R V+G+K
Sbjct: 24 AKKKDF---GNYLIEDFKIREYIKKNVINSGVSKVMIERTSNKCYVTIYTSRPGFVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I ++ + + K F N V L ++V A AE++ +L+ ++ RRA
Sbjct: 81 GSDIDKIKNNLSK---FTTNEVALNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRAQR-AKSMKFKDGYMIS 159
++ + GA+G +V VSG+L A++ +DG + S
Sbjct: 138 MQSCIRLGARGIKVSVSGRLGGNEIARTEWLRDGSIPS 175
>gi|260589273|ref|ZP_05855186.1| ribosomal protein S3 [Blautia hansenii DSM 20583]
gi|331082679|ref|ZP_08331802.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540354|gb|EEX20923.1| ribosomal protein S3 [Blautia hansenii DSM 20583]
gi|330400298|gb|EGG79940.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 218
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+G F L E L ++L G S +E+ R +III + V+G+ G
Sbjct: 21 KWYAEGDFADNLVEDYNIRTYLKKKLYSAGVSKIEIERASDRVKIIIYTAKPGVVIGKGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ +QK F + + + ++V A AE++ +L ++ RRA +
Sbjct: 81 AEIEKVKVELQK---FTDKKLVVDIKEVKRPDKDAQLVAENIALQLENRISFRRAMKSTM 137
Query: 124 RFIMESGAKGCEVIVSGKL 142
M++GAKG + VSG+L
Sbjct: 138 SRTMKAGAKGIKTAVSGRL 156
>gi|218961427|ref|YP_001741202.1| 30S ribosomal subunit protein S3 [Candidatus Cloacamonas
acidaminovorans]
gi|167730084|emb|CAO80996.1| 30S ribosomal subunit protein S3 [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 215
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 48 IIIRATRTQNVLGEKGRRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAE 103
I I R V+G+KG I EL + K K P SV + E ++ L A A+
Sbjct: 66 IDIYTARPGLVIGKKGEDIDKLRNELNVFINKDRKNPI-SVSINIEPIDKMWLDARLVAQ 124
Query: 104 SLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ +L ++ RRA +R++M+ A+G +V VSG+L A+ A+S ++K G
Sbjct: 125 EIARQLEERISFRRAMKMAIRYVMKENAQGVKVQVSGRLGGAEIARSERYKQG 177
>gi|118595329|ref|ZP_01552676.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
gi|118441107|gb|EAV47734.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
Length = 292
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ ++ FA L E L ++LA S + + +I I + R V+G+K
Sbjct: 21 KWYSNSKNFASLLQNDIKVREFLNKKLANAAVSRIVIERPAKNAKITIYSARPGIVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I L S +Q P V+L E++ + A A+S+ +L + RRA
Sbjct: 81 GEDIETLRSSLQSLMGIP---VQLNIEEIRKPEVDATLIAQSIAQQLEKRVMFRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDG 155
++ M GA+G +++ SG+L + A+S +++G
Sbjct: 138 MQNAMRLGAQGVKIMSSGRLNGIEIARSEWYREG 171
>gi|42524369|ref|NP_969749.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus HD100]
gi|426404877|ref|YP_007023848.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus str. Tiberius]
gi|61215579|sp|Q6MJ20.1|RS3_BDEBA RecName: Full=30S ribosomal protein S3
gi|39576578|emb|CAE80742.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus HD100]
gi|425861545|gb|AFY02581.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus str. Tiberius]
Length = 221
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L + L +L G + +E+ + +III R V+G+KG I L + VQK
Sbjct: 39 LRKFLKDKLKNAGVAKIEMERAAKKIKIIISTARPGVVIGKKGSGIDALKAEVQK---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
N V L ++V L A AES+ +L ++ RRA + ++ G +G ++ VSG
Sbjct: 96 PNEVFLSIQEVRKPDLDAQLVAESIAQQLEKRISWRRALKKSIAAAIKGGVRGIKIRVSG 155
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNE 166
+L DG I+ + NE
Sbjct: 156 RL-----------DGAEIARSEWYNE 170
>gi|342218000|ref|ZP_08710632.1| ribosomal protein S3 [Megasphaera sp. UPII 135-E]
gi|341591766|gb|EGS34868.1| ribosomal protein S3 [Megasphaera sp. UPII 135-E]
Length = 223
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L +L G S +E+ + R ++II + V+G G I ++ ++K F
Sbjct: 37 KIREFLKEQLFIAGVSRIEIERSAKRIKLIIHTAKPGMVIGRGGAGIEDIKKALKK---F 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V++ ++ L A AE++ +L + RRA + M GAKG +++ S
Sbjct: 94 TSKTVDVNIAEIKQAELDATLVAENIASQLERRIGFRRAMKQSVGRTMRMGAKGIKIMCS 153
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 154 GRLGGAEIARSESVRDG 170
>gi|335356552|ref|ZP_08548422.1| 30S ribosomal protein S3 [Lactobacillus animalis KCTC 3501]
Length = 218
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVLT------RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F + L+E L ++LA+ S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFASNLHEDLHIREYIEKKLADAAVSTVEIERAAKRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE + L A ES+ +L +A RRA
Sbjct: 81 SEVEKLRKELNNLTGKRVHI--NIVE-----IKKPDLEAKLVGESIAQQLENRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
++ M +GAKG +V V+G+L A ++ +F +G
Sbjct: 134 KQAIQRTMRAGAKGIKVQVAGRLNGADMSRIEQFSEG 170
>gi|406940788|gb|EKD73452.1| hypothetical protein ACD_45C00313G0006 [uncultured bacterium]
Length = 227
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA+ G S +++ +I + R ++G+ G+ + L + K
Sbjct: 38 KVREYLYKKLAQAGISRIQIDRPARNAKITVYTARPGVIIGKSGKEVETLRDEINKILNV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E+V L A AE++ +L + RRA V+ M GAKG ++ VS
Sbjct: 98 P---VHVSIEEVRKPELDAKLVAEAVAQQLEKRVMFRRAMKRVVTTAMRLGAKGIKICVS 154
Query: 140 GKLRAQR-AKSMKFKDG 155
G+L A+S +++G
Sbjct: 155 GRLGGTEIARSEWYREG 171
>gi|339449254|ref|ZP_08652810.1| 30S ribosomal protein S3 [Lactobacillus fructivorans KCTC 3543]
Length = 221
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 11 FVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+ D F + LNE L + LA+ S V++ R + I + V+G+ G
Sbjct: 23 YANDDKFASYLNEDLKIRNYLAKRLADASVSSVDIERAAKRVNVSIHTAKPGMVIGKGGA 82
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
E+ S+ ++ K V + +V L A E++ +L G +A RRA ++
Sbjct: 83 ---EVESLRKELNKLTGRRVHVNIVEVKKPDLEADLVGENVARQLEGRVAFRRAMRQAMQ 139
Query: 125 FIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
+M SGAKG +V SG+L A + ++ DG
Sbjct: 140 RVMRSGAKGVKVQSSGRLNGADMTRIERYSDG 171
>gi|406905577|gb|EKD47001.1| hypothetical protein ACD_66C00260G0004 [uncultured bacterium]
Length = 221
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ ++A + E L +EL E G VE+ + + I A + V+G G I
Sbjct: 26 KKNYIAQLQDDIHVREFLVKELREAGVDLVEIDRNANKMTVTIHAAKPGVVIGRSGAGIE 85
Query: 68 ELTSVVQKR-FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+L VQK F+ ++ + ++++ L A + + L RR+ +
Sbjct: 86 DLRKKVQKEFFRGRRMNIIINVQEISQPSLSAQVIGLQIAQDIERRLPFRRSMKMAAERV 145
Query: 127 MESGAKGCEVIVSGKL 142
M+SGAKG +++V+G+L
Sbjct: 146 MKSGAKGVKIMVAGRL 161
>gi|383753521|ref|YP_005432424.1| putative 30S ribosomal protein S3 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365573|dbj|BAL82401.1| putative 30S ribosomal protein S3 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 222
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F L+E L + L G S +E + R +I I + V+G G
Sbjct: 21 KWYADKDFADNLHEDIKIRDYLKQSLQAAGVSRIETERSKNRLKITIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ ++K + E V++ ++ + A AE++ +L +A RRA +
Sbjct: 81 SGIEQIKEGLKK---YTEKKVDINIAEIKQPDMDATLVAENIAQQLERRIAFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
M GAKG +V +SG+L A+ A+ +++G
Sbjct: 138 GRTMRLGAKGIKVALSGRLGGAEIARKEAYREG 170
>gi|225873072|ref|YP_002754531.1| 30S ribosomal protein S3 [Acidobacterium capsulatum ATCC 51196]
gi|254764506|sp|C1F636.1|RS3_ACIC5 RecName: Full=30S ribosomal protein S3
gi|225794492|gb|ACO34582.1| ribosomal protein S3 [Acidobacterium capsulatum ATCC 51196]
Length = 223
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 25 LTRELAED----GYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L REL E G S VEV + +IIR R ++G KG I +L + +QKR
Sbjct: 38 LKRELKEKLKAAGVSSVEVERPGNKLRLIIRTARPGIIIGRKGAEIEKLKADLQKR---- 93
Query: 81 ENSVELYAE--KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ E++ + +VN L A AE++ +L + RRA + + G KG +V V
Sbjct: 94 -TNREVFIDILEVNKPELDAQLIAENIALQLEKRVGFRRAMRKAVDSALRFGCKGIKVRV 152
Query: 139 SGKL 142
SG+L
Sbjct: 153 SGRL 156
>gi|192362436|ref|YP_001981214.1| 30S ribosomal protein S3 [Cellvibrio japonicus Ueda107]
gi|190688601|gb|ACE86279.1| ribosomal protein S3 [Cellvibrio japonicus Ueda107]
Length = 226
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 11 FVADGVFFAE-LN------EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ ADG +A+ LN + +LA S V++ I I R V+G+KG
Sbjct: 22 WYADGTDYADKLNIDLKVRSYIQEKLASASVSRVDIERPANTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + + K+ P V + E++ L A A+S+ +L + RRA +
Sbjct: 82 EDVDKLRAEISKQMGVP---VHINIEEIRKPDLDAALVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDG 155
+ M GA+G ++ V G+L A+ A+S +++G
Sbjct: 139 QNAMRQGAEGIKIQVGGRLGGAEIARSEWYREG 171
>gi|253827230|ref|ZP_04870115.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|313141433|ref|ZP_07803626.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|253510636|gb|EES89295.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|313130464|gb|EFR48081.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
Length = 235
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RKF+ +++A ++++L A +VRVT V A R ++G+KG + +
Sbjct: 40 RKFLKKELYYAGVSDILIERTAR------KVRVTVV-------AARPGIIIGKKGADVEK 86
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L + K + L ++V A AES+ +L +A RRA V++ M+
Sbjct: 87 LKESLNK---IVNKDIFLNIKEVKKPQSNAQLAAESVATQLERRVAFRRAMKKVMQGAMK 143
Query: 129 SGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
SGAKG +V VSG+L A+ A++ + +G
Sbjct: 144 SGAKGIKVKVSGRLAGAEMARTEWYMEG 171
>gi|94985961|ref|YP_605325.1| 30S ribosomal protein S3 [Deinococcus geothermalis DSM 11300]
gi|122986551|sp|Q1IX78.1|RS3_DEIGD RecName: Full=30S ribosomal protein S3
gi|94556242|gb|ABF46156.1| ribosomal protein S3 [Deinococcus geothermalis DSM 11300]
Length = 248
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ ++++++LA G + +E+ + +II A + V+G+ G I++L +++
Sbjct: 38 KIRKLVSQKLAAAGIARIEIERAGQQVNVIISAAKPGIVIGKGGESIKQLRGEIERLVSA 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V + ++ N + A A + ++ A RRA + +MESGA+G +VI+S
Sbjct: 98 --GTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A++A++ K +G
Sbjct: 156 GRLGGAEQARTEKVLEG 172
>gi|374587555|ref|ZP_09660647.1| SSU ribosomal protein S3P [Leptonema illini DSM 21528]
gi|373876416|gb|EHQ08410.1| SSU ribosomal protein S3P [Leptonema illini DSM 21528]
Length = 225
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 14 DGVFFA------------ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
D ++FA ++ E+L + + G + V P + ++I R V+G
Sbjct: 19 DSIWFASEKYRAFLHEDIKIKEMLKKRYKKAGIVRINVHRYPEKINVVIETVRPGMVIGP 78
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KG I E+ + ++ P N L ++ A A+S+ +L + RRA
Sbjct: 79 KGATIEEVKAQLKGMVSAPIN---LSIVEIKKPETVAKTIADSIAQQLEQRMPFRRAMKQ 135
Query: 122 VLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
LR M G +G ++ VSG+L A ++ ++K+G
Sbjct: 136 ALRGAMRGGVEGVKIAVSGRLNGADMSRREQYKEG 170
>gi|433448974|ref|ZP_20411839.1| 30S ribosomal protein S3 [Weissella ceti NC36]
gi|429539363|gb|ELA07400.1| 30S ribosomal protein S3 [Weissella ceti NC36]
Length = 222
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A + K+ F A+ + +L + + +LA+ S +E+ T R I I + V+G+
Sbjct: 20 AKWYADKKDFAANLLEDTKLRKYIETKLADASVSRIEIERTANRVNISIHTAKPGMVIGK 79
Query: 62 KGRRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G + +L+ +V K + N +E+ + + L A L ++ A RR
Sbjct: 80 GGSEVDALRNQLSKMVAKGERVHINIIEIKKPDLEAK-LVGSQIAGDLERRV----AFRR 134
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL 142
A G ++ M SGAKG +V VSG+L
Sbjct: 135 AMRGAMQRAMRSGAKGIKVQVSGRL 159
>gi|254468886|ref|ZP_05082292.1| ribosomal protein S3 [beta proteobacterium KB13]
gi|207087696|gb|EDZ64979.1| ribosomal protein S3 [beta proteobacterium KB13]
Length = 282
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L ++LA S + + ++ I R V+G+KG I L S +Q P
Sbjct: 41 EFLNKKLANAAVSKIIIERPAKNAKVTIMTARPGIVIGKKGEDIENLRSDLQGLMGIP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V+L E+V + A A+S+ +L + RRA ++ M GA+G +++ SG+L
Sbjct: 99 -VQLNIEEVRKPEIDATLIAQSIAQQLEKRVQFRRAMKRAMQNAMRLGAQGIKIMSSGRL 157
Query: 143 RA-QRAKSMKFKDG 155
+ A+S +++G
Sbjct: 158 NGIEIARSEWYREG 171
>gi|377832275|ref|ZP_09815237.1| ribosomal protein S3 [Lactobacillus mucosae LM1]
gi|377553911|gb|EHT15628.1| ribosomal protein S3 [Lactobacillus mucosae LM1]
Length = 217
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ + A L+E L + LA+ S +E+ R + I + V+G+ G
Sbjct: 21 KWYAEKDYAAYLSEDLRIRKYIEKRLADASVSTIEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE+ ++ L ++ AE L ++ A RRA
Sbjct: 81 SEVEALRKELNALTGKRVHI--NVVEIKKPDLDAH-LVGVSVAEQLEARV----AFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKL 142
G ++ M +GAKG ++ V+G+L
Sbjct: 134 RGAIQRAMRAGAKGIKIQVAGRL 156
>gi|91774641|ref|YP_544397.1| 30S ribosomal protein S3 [Methylobacillus flagellatus KT]
gi|123078974|sp|Q1H4N1.1|RS3_METFK RecName: Full=30S ribosomal protein S3
gi|91708628|gb|ABE48556.1| SSU ribosomal protein S3P [Methylobacillus flagellatus KT]
Length = 236
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L ++LA S + + +I I + R V+G+KG I L S +Q P
Sbjct: 41 EFLKKKLAHAAVSKIVIERPAKNAKITIYSARPGIVIGKKGEDIESLRSGLQGLMGVP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V L E+V + A AES+ +L + RRA ++ M GA+G +++ SG+L
Sbjct: 99 -VHLNIEEVRKPEIDATLIAESIAQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRL 157
Query: 143 RA-QRAKSMKFKDG 155
+ A++ +++G
Sbjct: 158 NGIEIARTEWYREG 171
>gi|94968260|ref|YP_590308.1| 30S ribosomal protein S3 [Candidatus Koribacter versatilis
Ellin345]
gi|123256699|sp|Q1ISB6.1|RS3_ACIBL RecName: Full=30S ribosomal protein S3
gi|94550310|gb|ABF40234.1| SSU ribosomal protein S3P [Candidatus Koribacter versatilis
Ellin345]
Length = 223
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+L L +L G S +EV + IIIR R ++G KG I +L +QKR
Sbjct: 37 KLKAELKEKLKSAGVSSIEVERPGNKLRIIIRTARPGIIIGRKGAEIDKLKGELQKR--- 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
V + ++V+ L A AES+ +L + RRA + + G KG +V VS
Sbjct: 94 TNREVYIDIQEVHKPELDAQLVAESIALQLEKRVGFRRAMRKSVDSALRFGCKGIKVRVS 153
Query: 140 GKL 142
G+L
Sbjct: 154 GRL 156
>gi|374309529|ref|YP_005055959.1| 30S ribosomal protein S3 [Granulicella mallensis MP5ACTX8]
gi|358751539|gb|AEU34929.1| ribosomal protein S3 [Granulicella mallensis MP5ACTX8]
Length = 223
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
V D AEL E +L G S VEV + +IIR R ++G KG I +L
Sbjct: 32 LVEDVKLKAELRE----KLKAAGVSSVEVERPGNKLRLIIRTARPGIIIGRKGAEIDKLK 87
Query: 71 SVVQKRFKFPENSVELYAE--KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ +QKR + E++ + +VN L A AE++ +L ++ RRA + +
Sbjct: 88 ADIQKR-----TNREVFIDILEVNKPELDAQLVAENIALQLEKRVSFRRAMRKSVDSALR 142
Query: 129 SGAKGCEVIVSGKL 142
G KG +V VSG+L
Sbjct: 143 FGCKGIKVRVSGRL 156
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,524,439,735
Number of Sequences: 23463169
Number of extensions: 89648438
Number of successful extensions: 233450
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 2123
Number of HSP's that attempted gapping in prelim test: 230517
Number of HSP's gapped (non-prelim): 3186
length of query: 197
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 62
effective length of database: 9,191,667,552
effective search space: 569883388224
effective search space used: 569883388224
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 73 (32.7 bits)