Your job contains 1 sequence.
>029202
MDFSPLTDALASKSYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYVNDINSARF
LWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTK
RMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKL
DPSKLQRLTEYVFHLEH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029202
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129435 - symbol:COP9 "AT4G14110" species:3702... 761 1.7e-75 1
ZFIN|ZDB-GENE-040426-982 - symbol:cops8 "COP9 constitutiv... 297 2.5e-26 1
UNIPROTKB|A4FV74 - symbol:COPS8 "COPS8 protein" species:9... 289 1.8e-25 1
UNIPROTKB|F1SM07 - symbol:COPS8 "Uncharacterized protein"... 285 4.6e-25 1
UNIPROTKB|Q99627 - symbol:COPS8 "COP9 signalosome complex... 282 9.7e-25 1
MGI|MGI:1915363 - symbol:Cops8 "COP9 (constitutive photom... 281 1.2e-24 1
RGD|1311404 - symbol:Cops8 "COP9 signalosome subunit 8" s... 281 1.2e-24 1
UNIPROTKB|B8ZZP3 - symbol:COPS8 "COP9 signalosome complex... 278 2.6e-24 1
UNIPROTKB|E1C444 - symbol:COPS8 "Uncharacterized protein"... 276 4.2e-24 1
UNIPROTKB|E9PGT6 - symbol:COPS8 "COP9 signalosome complex... 190 2.7e-18 2
DICTYBASE|DDB_G0275471 - symbol:csn8 "COP9 signalosome co... 198 7.7e-16 1
FB|FBgn0261437 - symbol:CSN8 "COP9 complex homolog subuni... 140 1.1e-09 1
ASPGD|ASPL0000046285 - symbol:csnH species:162425 "Emeric... 108 0.00026 1
>TAIR|locus:2129435 [details] [associations]
symbol:COP9 "AT4G14110" species:3702 "Arabidopsis
thaliana" [GO:0005515 "protein binding" evidence=IPI] [GO:0008180
"signalosome" evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0000338 "protein deneddylation" evidence=TAS]
[GO:0004222 "metalloendopeptidase activity" evidence=TAS]
[GO:0009416 "response to light stimulus" evidence=IMP] [GO:0010387
"signalosome assembly" evidence=IMP] [GO:0010388 "cullin
deneddylation" evidence=RCA;IMP] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] [GO:0005634 "nucleus" evidence=IDA]
GO:GO:0007275 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009753 EMBL:Z97335 EMBL:AL161538 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0004222 GO:GO:0009416 GO:GO:0009585
GO:GO:0008180 GO:GO:0010388 InterPro:IPR019280 Pfam:PF10075
GO:GO:0010387 EMBL:L32874 EMBL:AK118535 EMBL:BT006489
IPI:IPI00548043 PIR:A54842 RefSeq:NP_193147.1 UniGene:At.4252
ProteinModelPortal:P43255 IntAct:P43255 STRING:P43255 PaxDb:P43255
PRIDE:P43255 DNASU:827049 EnsemblPlants:AT4G14110.1 GeneID:827049
KEGG:ath:AT4G14110 TAIR:At4g14110 eggNOG:NOG321945
HOGENOM:HOG000253954 InParanoid:P43255 KO:K12181 OMA:YAIHLLG
PhylomeDB:P43255 ProtClustDB:CLSN2685958 Genevestigator:P43255
GermOnline:AT4G14110 Uniprot:P43255
Length = 197
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 141/197 (71%), Positives = 168/197 (85%)
Query: 1 MDFSPLTDALASKSYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYVNDINSARF 60
MD SP+ +ALA+KS++KIADICD LML+VA+EGI + D+WPY IHLLGY+YV+D +SARF
Sbjct: 1 MDLSPVKEALAAKSFDKIADICDTLMLQVASEGIEYHDDWPYAIHLLGYFYVDDCDSARF 60
Query: 61 LWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTK 120
LWK IP+ IK+ + EVVAAW IGQ LWT DYAGVY+AIRG+DWSQEA+ +VAAFS+LYTK
Sbjct: 61 LWKRIPTAIKERKPEVVAAWGIGQKLWTHDYAGVYEAIRGYDWSQEAKDMVAAFSDLYTK 120
Query: 121 RMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKL 180
RMFQLLLSAYSTI+ D ALFLGM EDDA YV + GWT+D AS+M +VKKQ + EQK+
Sbjct: 121 RMFQLLLSAYSTITIHDLALFLGMTEDDATTYVVENGWTVDAASQMASVKKQAVKREQKV 180
Query: 181 DPSKLQRLTEYVFHLEH 197
D SKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197
>ZFIN|ZDB-GENE-040426-982 [details] [associations]
symbol:cops8 "COP9 constitutive photomorphogenic
homolog subunit 8 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008180 "signalosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] ZFIN:ZDB-GENE-040426-982 GO:GO:0005737
GO:GO:0008180 InterPro:IPR019280 Pfam:PF10075 eggNOG:NOG321945
HOGENOM:HOG000253954 KO:K12181 EMBL:BC046071 EMBL:BC071487
IPI:IPI00487878 RefSeq:NP_956523.1 UniGene:Dr.78319 STRING:Q7ZUZ0
PRIDE:Q7ZUZ0 Ensembl:ENSDART00000034686 GeneID:393198
KEGG:dre:393198 CTD:10920 GeneTree:ENSGT00390000000977
HOVERGEN:HBG051139 InParanoid:Q7ZUZ0 OMA:VLEQGWQ OrthoDB:EOG43XV4D
NextBio:20814263 ArrayExpress:Q7ZUZ0 Bgee:Q7ZUZ0 Uniprot:Q7ZUZ0
Length = 191
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 60/154 (38%), Positives = 91/154 (59%)
Query: 46 LLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQ 105
L+ Y ND+N+AR+LWK IP IK + E+ A W +GQ +W RD+ G+Y AI + WS+
Sbjct: 39 LVLYLLHNDMNNARYLWKRIPQAIKTANPEMAAIWAVGQRIWQRDFPGIYSAIAAYQWSE 98
Query: 106 EAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASR 165
++ A E +R + L+ AY++IS +D A F+G + ++A V GW DP +R
Sbjct: 99 SILPVMEALRESTRRRAYGLVAQAYTSISAEDFAAFVGYSVEEAVKGVVSHGWQADPNTR 158
Query: 166 MLTVKKQPLVTEQKLDPSKLQ--RLTEYVFHLEH 197
M+ +K P L P++ Q RLT+YV LE+
Sbjct: 159 MIMPQK-PDPPPVSLVPNEQQLARLTDYVAFLEN 191
>UNIPROTKB|A4FV74 [details] [associations]
symbol:COPS8 "COPS8 protein" species:9913 "Bos taurus"
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019280
Pfam:PF10075 eggNOG:NOG321945 HOGENOM:HOG000253954 KO:K12181
CTD:10920 GeneTree:ENSGT00390000000977 HOVERGEN:HBG051139
OMA:VLEQGWQ OrthoDB:EOG43XV4D EMBL:DAAA02009357 EMBL:DAAA02009358
EMBL:BC123824 IPI:IPI00695584 RefSeq:NP_001076966.1 UniGene:Bt.4113
STRING:A4FV74 Ensembl:ENSBTAT00000007696 GeneID:540493
KEGG:bta:540493 InParanoid:A4FV74 NextBio:20878669 Uniprot:A4FV74
Length = 209
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 60/164 (36%), Positives = 93/164 (56%)
Query: 9 ALASKSYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYV-NDINSARFLWKSIPS 67
A +S S++K+ D C++ L+ A GI P LL Y + ND+N+AR+LWK IP
Sbjct: 7 AESSFSFKKLLDQCENQELE-APGGIATP---PVYGQLLALYLLHNDMNNARYLWKRIPP 62
Query: 68 TIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLL 127
IK + +E+ W +GQ +W RD+ GVY I WS+ Q ++ A + +R F L+
Sbjct: 63 AIKSANSELGGIWSVGQRIWQRDFPGVYSTINAHQWSEAVQPIMEALRDATRRRAFALVS 122
Query: 128 SAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 171
AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 123 QAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKK 166
>UNIPROTKB|F1SM07 [details] [associations]
symbol:COPS8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] GO:GO:0005737 GO:GO:0008180 GO:GO:0010388
InterPro:IPR019280 Pfam:PF10075 KO:K12181
GeneTree:ENSGT00390000000977 OMA:VLEQGWQ EMBL:CU915301
RefSeq:XP_003133809.1 UniGene:Ssc.6380 Ensembl:ENSSSCT00000017776
GeneID:100515865 KEGG:ssc:100515865 Uniprot:F1SM07
Length = 209
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 58/159 (36%), Positives = 91/159 (57%)
Query: 14 SYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYV-NDINSARFLWKSIPSTIKDS 72
+++K+ D C++ L+ A GI P LL Y + ND+N+AR+LWK IP IK +
Sbjct: 12 NFKKLLDQCENQELE-APGGIATP---PVYGQLLALYLLHNDMNNARYLWKRIPPAIKSA 67
Query: 73 RAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYST 132
+E+ W +GQ +W RD+ GVY I WS+ Q ++ A + +R F L+ AY++
Sbjct: 68 NSELGGIWSVGQRIWQRDFPGVYSTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTS 127
Query: 133 ISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 171
I D A F+G+ ++A V +QGW D ++RM+ KK
Sbjct: 128 IVADDFAAFVGLPVEEAVKGVLEQGWQADSSTRMVMPKK 166
>UNIPROTKB|Q99627 [details] [associations]
symbol:COPS8 "COP9 signalosome complex subunit 8"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737 EMBL:CH471063
GO:GO:0008180 GO:GO:0010388 InterPro:IPR019280 Pfam:PF10075
eggNOG:NOG321945 HOGENOM:HOG000253954 KO:K12181 CTD:10920
HOVERGEN:HBG051139 OMA:VLEQGWQ OrthoDB:EOG43XV4D EMBL:U51205
EMBL:AK289891 EMBL:CR456994 EMBL:AC105760 EMBL:BC003090
EMBL:BC036499 EMBL:BC080617 IPI:IPI00009480 IPI:IPI00377080
RefSeq:NP_006701.1 RefSeq:NP_937832.1 UniGene:Hs.531713
ProteinModelPortal:Q99627 DIP:DIP-42075N IntAct:Q99627
MINT:MINT-1204089 STRING:Q99627 PhosphoSite:Q99627 DMDM:55976572
PaxDb:Q99627 PRIDE:Q99627 DNASU:10920 Ensembl:ENST00000354371
Ensembl:ENST00000392008 GeneID:10920 KEGG:hsa:10920 UCSC:uc002vwg.3
GeneCards:GC02P237993 HGNC:HGNC:24335 HPA:HPA036485
neXtProt:NX_Q99627 PharmGKB:PA134968686 InParanoid:Q99627
PhylomeDB:Q99627 ChiTaRS:COPS8 GenomeRNAi:10920 NextBio:41481
ArrayExpress:Q99627 Bgee:Q99627 CleanEx:HS_COPS8
Genevestigator:Q99627 GermOnline:ENSG00000198612 Uniprot:Q99627
Length = 209
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 60/178 (33%), Positives = 98/178 (55%)
Query: 14 SYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYV-NDINSARFLWKSIPSTIKDS 72
S++K+ D C++ L+ A GI P LL Y + ND+N+AR+LWK IP IK +
Sbjct: 12 SFKKLLDQCENQELE-APGGIATP---PVYGQLLALYLLHNDMNNARYLWKRIPPAIKSA 67
Query: 73 RAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYST 132
+E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++
Sbjct: 68 NSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTS 127
Query: 133 ISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPSKLQRLTE 190
I D A F+G+ ++A + +QGW D +RM+ +K P+ + +K L+E
Sbjct: 128 IIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRK-PVAGALDVSFNKFIPLSE 184
>MGI|MGI:1915363 [details] [associations]
symbol:Cops8 "COP9 (constitutive photomorphogenic) homolog,
subunit 8 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] MGI:MGI:1915363 GO:GO:0005737 GO:GO:0008180
GO:GO:0010388 InterPro:IPR019280 Pfam:PF10075 eggNOG:NOG321945
HOGENOM:HOG000253954 KO:K12181 CTD:10920
GeneTree:ENSGT00390000000977 HOVERGEN:HBG051139 OMA:VLEQGWQ
OrthoDB:EOG43XV4D EMBL:AF482000 EMBL:AF502144 EMBL:AK079111
EMBL:AK079522 EMBL:AK088323 EMBL:AK090013 EMBL:AK145899
EMBL:AK162502 EMBL:BC017690 EMBL:BC021488 EMBL:BC024421
IPI:IPI00187407 RefSeq:NP_598566.3 UniGene:Mm.119177
ProteinModelPortal:Q8VBV7 STRING:Q8VBV7 REPRODUCTION-2DPAGE:Q8VBV7
PaxDb:Q8VBV7 PRIDE:Q8VBV7 DNASU:108679 Ensembl:ENSMUST00000036153
GeneID:108679 KEGG:mmu:108679 UCSC:uc007bzi.1 InParanoid:Q8VBV7
NextBio:361215 Bgee:Q8VBV7 Genevestigator:Q8VBV7
GermOnline:ENSMUSG00000034432 Uniprot:Q8VBV7
Length = 209
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 14 SYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSR 73
S+ K+ D C++ L+ A GI + ++ L Y ND+N+AR+LWK IP IK +
Sbjct: 12 SFRKLLDQCENQELE-APGGIATPPVYGQLLAL--YLLQNDMNNARYLWKRIPPAIKSAN 68
Query: 74 AEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTI 133
+E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++I
Sbjct: 69 SELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
Query: 134 STQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 171
D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 129 IADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRK 166
>RGD|1311404 [details] [associations]
symbol:Cops8 "COP9 signalosome subunit 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1311404
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019280
Pfam:PF10075 eggNOG:NOG321945 HOGENOM:HOG000253954 KO:K12181
CTD:10920 HOVERGEN:HBG051139 OrthoDB:EOG43XV4D EMBL:BC063182
IPI:IPI00421469 RefSeq:NP_001013245.1 UniGene:Rn.99919
IntAct:Q6P4Z9 STRING:Q6P4Z9 PhosphoSite:Q6P4Z9 PRIDE:Q6P4Z9
DNASU:363283 GeneID:363283 KEGG:rno:363283 UCSC:RGD:1311404
InParanoid:Q6P4Z9 NextBio:683116 ArrayExpress:Q6P4Z9
Genevestigator:Q6P4Z9 GermOnline:ENSRNOG00000019635 Uniprot:Q6P4Z9
Length = 209
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 14 SYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSR 73
S+ K+ D C++ L+ A GI + ++ L Y ND+N+AR+LWK IP IK +
Sbjct: 12 SFRKLLDQCENQELE-APGGIATPPVYGQLLAL--YLLQNDMNNARYLWKRIPPAIKSAN 68
Query: 74 AEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTI 133
+E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++I
Sbjct: 69 SELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
Query: 134 STQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 171
D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 129 IADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRK 166
>UNIPROTKB|B8ZZP3 [details] [associations]
symbol:COPS8 "COP9 signalosome complex subunit 8"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] GO:GO:0005634 GO:GO:0005737 InterPro:IPR019280
Pfam:PF10075 HOGENOM:HOG000253954 HOVERGEN:HBG051139 EMBL:AC105760
HGNC:HGNC:24335 ChiTaRS:COPS8 IPI:IPI00916030
ProteinModelPortal:B8ZZP3 STRING:B8ZZP3 PRIDE:B8ZZP3
Ensembl:ENST00000409629 ArrayExpress:B8ZZP3 Bgee:B8ZZP3
Uniprot:B8ZZP3
Length = 206
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 61/178 (34%), Positives = 99/178 (55%)
Query: 14 SYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYV-NDINSARFLWKSIPSTIKDS 72
S++K+ D C++ L+ A GI P LL Y + ND+N+AR+LWK IP IK +
Sbjct: 12 SFKKLLDQCENQELE-APGGIATP---PVYGQLLALYLLHNDMNNARYLWKRIPPAIKSA 67
Query: 73 RAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYST 132
+E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++
Sbjct: 68 NSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTS 127
Query: 133 ISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPSKLQRLTE 190
I D A F+G+ ++A V++QGW D +RM+ +K P+ + +K L+E
Sbjct: 128 IIADDFAAFVGLPVEEA---VKEQGWQADSTTRMVLPRK-PVAGALDVSFNKFIPLSE 181
>UNIPROTKB|E1C444 [details] [associations]
symbol:COPS8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] GO:GO:0005737 GO:GO:0008180 GO:GO:0010388
InterPro:IPR019280 Pfam:PF10075 GeneTree:ENSGT00390000000977
OMA:VLEQGWQ EMBL:AADN02034481 IPI:IPI00594736
Ensembl:ENSGALT00000006274 Uniprot:E1C444
Length = 209
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 59/159 (37%), Positives = 90/159 (56%)
Query: 15 YEKIADICDDLMLKVAAEGIVFQDEWPYVI-HLLGYYYV-NDINSARFLWKSIPSTIKDS 72
+ K+ + C+ L+ A GI P V LL Y + ND+N+AR+LWK IP IK +
Sbjct: 13 FRKLLEQCETQELE-APGGIAT----PLVYGQLLALYLLHNDMNNARYLWKRIPPAIKSA 67
Query: 73 RAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYST 132
AE+ A W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++
Sbjct: 68 NAELGAVWSVGQRIWQRDFPGIYTTISAHQWSETVQPIMEALRDATRRRAFGLVSQAYTS 127
Query: 133 ISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 171
I D A F+G+ ++A V +QGW D ++RM+ KK
Sbjct: 128 IVADDFAAFVGLPVEEAVKGVLEQGWQADFSTRMVMPKK 166
>UNIPROTKB|E9PGT6 [details] [associations]
symbol:COPS8 "COP9 signalosome complex subunit 8"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] GO:GO:0005634 GO:GO:0005737 InterPro:IPR019280
Pfam:PF10075 EMBL:AC105760 HGNC:HGNC:24335 ChiTaRS:COPS8
IPI:IPI00916489 ProteinModelPortal:E9PGT6 PRIDE:E9PGT6
Ensembl:ENST00000409334 ArrayExpress:E9PGT6 Bgee:E9PGT6
Uniprot:E9PGT6
Length = 173
Score = 190 (71.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 38/101 (37%), Positives = 58/101 (57%)
Query: 14 SYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYV-NDINSARFLWKSIPSTIKDS 72
S++K+ D C++ L+ A GI P LL Y + ND+N+AR+LWK IP IK +
Sbjct: 12 SFKKLLDQCENQELE-APGGIATP---PVYGQLLALYLLHNDMNNARYLWKRIPPAIKSA 67
Query: 73 RAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAA 113
+E+ W +GQ +W RD+ G+Y I WS+ Q ++ A
Sbjct: 68 NSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEA 108
Score = 45 (20.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 153 VQQQGWTLDPASRMLTVKKQPLVTEQKLDPSKLQRLTE 190
+ +QGW D +RM+ +K P+ + +K L+E
Sbjct: 112 ILEQGWQADSTTRMVLPRK-PVAGALDVSFNKFIPLSE 148
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 184 KLQRLTEYVFHLEH 197
+L RLT+YV LE+
Sbjct: 160 QLARLTDYVAFLEN 173
>DICTYBASE|DDB_G0275471 [details] [associations]
symbol:csn8 "COP9 signalosome complex subunit 8"
species:44689 "Dictyostelium discoideum" [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0275471 GO:GO:0005737 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008180 InterPro:IPR019280 Pfam:PF10075
eggNOG:NOG321945 KO:K12181 OMA:VLEQGWQ EMBL:DQ309436
RefSeq:XP_643634.1 STRING:Q75K24 PRIDE:Q75K24
EnsemblProtists:DDB0233107 GeneID:8620221 KEGG:ddi:DDB_G0275471
ProtClustDB:CLSZ2729184 Uniprot:Q75K24
Length = 196
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 50/199 (25%), Positives = 101/199 (50%)
Query: 1 MDFSPLTDALASKSYEKIADICDDLMLKVAAEGIVFQDEWPYVIHLLGYYYVNDINSARF 60
M F+ + + ++SK+++ I D C ++ ++ I + Y ++LL Y ND+ +A+
Sbjct: 1 MAFTEIANLISSKNFKAILDYCQ--RQEIESKNIDLIKSY-YGVYLLSYLINNDLINAKH 57
Query: 61 LWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTK 120
LWK IP+ K S ++ + I + + + Y ++ + + + E + +
Sbjct: 58 LWKRIPNDFKQSNQQLKNIYTIIKSISQTNPTITYTSL-SINIGDDYTPFITTLKENFQQ 116
Query: 121 RMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKL 180
R F+L+ +AYS+I+ D + +LG++ +D + + W D AS T+K P+ +
Sbjct: 117 RTFELISNAYSSITVNDCSSYLGISPEDTIKFTTSKCWEHDKASN--TLKPVPIQKQSSE 174
Query: 181 DPS---KLQRLTEYVFHLE 196
P+ +++ LT YV LE
Sbjct: 175 LPTGNQQIRSLTSYVLFLE 193
>FB|FBgn0261437 [details] [associations]
symbol:CSN8 "COP9 complex homolog subunit 8" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome" evidence=ISS]
[GO:0050821 "protein stabilization" evidence=IMP] [GO:0042742
"defense response to bacterium" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] GO:GO:0005737 GO:GO:0007095 GO:GO:0050821
EMBL:AE014134 GO:GO:0042742 GO:GO:0048477 GO:GO:0009790
GO:GO:0007476 GO:GO:0008180 GO:GO:0042461 GO:GO:0000338
GO:GO:0019781 InterPro:IPR019280 Pfam:PF10075 eggNOG:NOG321945
KO:K12181 GeneTree:ENSGT00390000000977 EMBL:BT011518
RefSeq:NP_723378.2 UniGene:Dm.33149 ProteinModelPortal:Q7KTH8
STRING:Q7KTH8 PaxDb:Q7KTH8 PRIDE:Q7KTH8 EnsemblMetazoa:FBtr0079646
GeneID:49077 KEGG:dme:Dmel_CG42522 CTD:49077 FlyBase:FBgn0261437
InParanoid:Q7KTH8 OMA:IYLYQNK OrthoDB:EOG4GQNNB PhylomeDB:Q7KTH8
GenomeRNAi:49077 NextBio:839630 Bgee:Q7KTH8 GermOnline:CG13383
GO:GO:0001745 GO:GO:0060626 Uniprot:Q7KTH8
Length = 182
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/152 (28%), Positives = 75/152 (49%)
Query: 49 YYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQ 108
Y Y N + A+ LW +P+ ++D + E++ + L +YA + I+ ++WS+ +
Sbjct: 35 YLYQNKLADAKLLWMRVPANLRDDK-ELIQLNLLNIALQNNNYADFFKHIK-YEWSERVK 92
Query: 109 ALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLG-MNEDDAAYYVQQQGWT--LDPASR 165
+ V + +F+L+ SAY +I Q L L M+ED+ + WT LD
Sbjct: 93 SPVEDLLNKQREELFKLMGSAYMSIY-QHNLLELSLMSEDELKHACAALNWTEELDGDRV 151
Query: 166 MLTVKKQPLVTEQKLDPSKLQRLTEYVFHLEH 197
+L K Q + D +L +LTE+V LE+
Sbjct: 152 ILKPKVQEAPPARGND-DQLLKLTEFVTFLEN 182
>ASPGD|ASPL0000046285 [details] [associations]
symbol:csnH species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IPI] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0005737 EMBL:BN001307 GO:GO:0008180
EMBL:AACD01000022 InterPro:IPR019280 Pfam:PF10075 STRING:P0C624
EnsemblFungi:CADANIAT00008069 eggNOG:NOG300951 HOGENOM:HOG000157472
OMA:KFTACGW OrthoDB:EOG422DV1 Uniprot:P0C624
Length = 212
Score = 108 (43.1 bits), Expect = 0.00026, P = 0.00026
Identities = 36/153 (23%), Positives = 62/153 (40%)
Query: 42 YVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIG-QHLWTRDYAGVYDAIRG 100
Y + + I AR L + IP I SR + + + + +W + +Y +R
Sbjct: 53 YTAFFFSHLLTDQICEARALTRRIPREI--SRLDAMQTCSLLLRAVWQSKHTEIYKILRE 110
Query: 101 FDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMN----EDDAAYYVQQQ 156
W +Q LV + + ++ + ++Y TI A +LG++ E D
Sbjct: 111 LPWPGRSQPLVQRYESYFQEKTLVEMSNSYETIRIAAAATYLGLDPAAVEGDIIEKFTAC 170
Query: 157 GWTLDPASRMLTVKKQPLVTEQKLDPSKLQRLT 189
GW D ++L K P+VT D S L+
Sbjct: 171 GWKWDSEKQLLHPK--PVVTAPPKDDSLQNELS 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.44 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 615 (65 KB)
Total size of DFA: 181 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.41u 0.12s 17.53t Elapsed: 00:00:01
Total cpu time: 17.41u 0.12s 17.53t Elapsed: 00:00:01
Start: Fri May 10 10:05:56 2013 End: Fri May 10 10:05:57 2013