BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029203
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 148/197 (75%), Gaps = 16/197 (8%)
Query: 10 NYLTNIGLGYSIAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIIL 69
Y+T++GLGYSIAIALGFLVL+ST++L+SYICCR + +++A N S S+ G+I+
Sbjct: 19 TYITSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIV 78
Query: 70 PRIIFVAEDDGQEENRNQDDDNLVVG-LDQAVINSYPKFQFTKESVS-----GNNNSNNI 123
PRIIFVAEDD E N+VVG LD +VINSYPKF FTK+ + G ++
Sbjct: 79 PRIIFVAEDDDLESG------NVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGR 132
Query: 124 NTTCSICLCEYKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLP----TPLST 179
TTCSICLCEY + EMLRMMPEC+HYFH+ C+DAWLKLNGSCPVCRNSPLP TP ST
Sbjct: 133 ETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQST 192
Query: 180 PLQEVVPLSQYAADRRR 196
PL EVVPLSQYAADRRR
Sbjct: 193 PLSEVVPLSQYAADRRR 209
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/187 (65%), Positives = 142/187 (75%), Gaps = 15/187 (8%)
Query: 10 NYLTNIGLGYSIAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIIL 69
+YLT +G GYSIAIALGFLVLLSTVLL+SYICCR + + + + SV IL
Sbjct: 28 SYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSV-----IL 82
Query: 70 PRIIFVAEDDGQEENRNQDDDNLVVGLDQAVINSYPKFQFTKES--VSGNNNSNNINTTC 127
PRIIFVAE+D N + + ++VVGLDQAVINSYPKF F+K++ S + +TTC
Sbjct: 83 PRIIFVAEED----NEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTC 138
Query: 128 SICLCEYKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLP----TPLSTPLQE 183
SICLCEYK+ EMLRMMPEC+HYFHLCC+DAWLKLNGSCPVCRNSPLP TPLSTPL E
Sbjct: 139 SICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSE 198
Query: 184 VVPLSQY 190
VVPLSQY
Sbjct: 199 VVPLSQY 205
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 20/192 (10%)
Query: 8 SPNYLTNI----GLGYSIAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVS 63
S ++LTN GL Y I +++G L+L++T+ L SY C R + S+ + S
Sbjct: 10 SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69
Query: 64 NDGIILPRIIFVAEDDGQEENRNQDD--DNLVV---GLDQAVINSYPKFQFTKESVSGNN 118
N G + P GQE +DD D +VV GL + VI +PK + + VS +
Sbjct: 70 N-GTLPP---------GQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSL 119
Query: 119 NSNNINTTC-SICLCEYKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPL 177
+ T+C SICL +YK ++M+R++P+C H FH CVD WL+L+ +CPVCR SPLP+P
Sbjct: 120 QKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPA 179
Query: 178 STPLQEVVPLSQ 189
TP+ +VVP S+
Sbjct: 180 MTPVADVVPFSR 191
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 96/176 (54%), Gaps = 29/176 (16%)
Query: 13 TNIGLGYSIAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIILPRI 72
+ +GLGY IAIA+ LVL+S ++LASYIC R ++ + E + V D LP
Sbjct: 9 SGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRD------EATSDVVLD---LP-- 57
Query: 73 IFVAEDDGQEENRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLC 132
+ +GLD+ VI SYP+ N N CSICLC
Sbjct: 58 --------------SPAAEVKLGLDRPVIESYPRIVLGDSRRLPRPN----NGPCSICLC 99
Query: 133 EYKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLS 188
+Y+ E +R +PEC H FH CVD WL+ + +CP+CRNSP P+ L+TPL ++VPL+
Sbjct: 100 DYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 94/180 (52%), Gaps = 27/180 (15%)
Query: 16 GLGYSIAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIILPRIIFV 75
G Y I +++G L+L++T+ L SY C R SS S N
Sbjct: 63 GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTN--------------------- 101
Query: 76 AEDDGQEENRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYK 135
+ + + ++V GLD+ I SYPK +++ + C+ICL +YK
Sbjct: 102 QDSTRIHHHHHHVIIDVVPGLDEDTIQSYPKILYSEA------KGPTTASCCAICLGDYK 155
Query: 136 DLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRR 195
+LR +P+C H FHL C+D WL+LN +CPVCR SPLPTPLSTPL EVVPL+ A R
Sbjct: 156 GKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAATR 215
>sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana
GN=ATL21A PE=3 SV=1
Length = 372
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 92 LVVGLDQAVINSYPKFQFTK-ESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYF 150
+ GLD+++I SY K + + + GNN+ + C ICL EY E +R +PEC H F
Sbjct: 288 VTTGLDESIIESYKKTELGESRRLPGNND----DIVCPICLSEYASKETVRCIPECDHCF 343
Query: 151 HLCCVDAWLKLNGSCPVCRNSPLP 174
H C+D WLK++GSCP+CRNSP P
Sbjct: 344 HSECIDVWLKIHGSCPLCRNSPSP 367
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 94 VGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLC 153
+GLD++ I SY K + ES SN++ C ICL EY E +R +PEC H FH
Sbjct: 297 IGLDESTIESYKKVEL-GESRRLPTGSNDV--VCPICLSEYATKETVRCLPECEHCFHTE 353
Query: 154 CVDAWLKLNGSCPVCRNSPLP 174
C+DAWLKL+ SCPVCR++P P
Sbjct: 354 CIDAWLKLHSSCPVCRSNPSP 374
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLD+ I S P F+F+ ++ G CS+CL +++D+E+LR++P+CRH FH+ C
Sbjct: 98 GLDKKAIESLPFFRFS--ALKGLKQ----GLECSVCLSKFEDVEILRLLPKCRHAFHIGC 151
Query: 155 VDAWLKLNGSCPVCRN 170
+D WL+ + +CP+CRN
Sbjct: 152 IDQWLEQHATCPLCRN 167
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 84 NRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMM 143
NR+ + GLD+ I S P F+F+ ++ G+ CS+CL +++ +E+LR++
Sbjct: 86 NRSTASSDRFSGLDKTAIESLPLFRFS--ALKGSKQ----GLDCSVCLSKFESVEILRLL 139
Query: 144 PECRHYFHLCCVDAWLKLNGSCPVCRN 170
P+CRH FH+ C+D WL+ + +CP+CR+
Sbjct: 140 PKCRHAFHIGCIDQWLEQHATCPLCRD 166
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 84 NRNQDDDNLVV--GLDQAVINSYPKFQFTK-ESVSGNNNSNNINTTCSICLCEYKDLEML 140
N Q +VV GLDQ+ I SY K + + + G N C ICL EY E +
Sbjct: 212 NTTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGTNG-----IICPICLSEYASKETV 266
Query: 141 RMMPECRHYFHLCCVDAWLKLNGSCPVCRNS 171
R MPEC H FH+ C+D WLK++ SCPVCRNS
Sbjct: 267 RCMPECDHCFHVQCIDEWLKIHSSCPVCRNS 297
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 7/79 (8%)
Query: 93 VVGLDQAVINSYPKFQFT--KESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYF 150
V GLD+A+INS+P F ++ KE G C++C+CE++D E LR+MPEC H F
Sbjct: 65 VRGLDEAIINSFPTFLYSEVKERRIGIGG-----VECAVCICEFEDHETLRLMPECCHVF 119
Query: 151 HLCCVDAWLKLNGSCPVCR 169
H CV WL + +CP+CR
Sbjct: 120 HADCVSVWLSDHSTCPLCR 138
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 95 GLDQAVINSYPKFQFTK-ESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLC 153
GLD++ I + P F+F K + V+G + + + CS+CL E+++ E LR++P C H FH+
Sbjct: 101 GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHID 160
Query: 154 CVDAWLKLNGSCPVCRNS 171
C+D WL+ N +CP+CR S
Sbjct: 161 CIDIWLQGNANCPLCRTS 178
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 95 GLDQAVINSYPKFQFTK-ESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLC 153
GLDQ+ I ++ K + + +SG N C ICL EY E +R +PEC H FH+
Sbjct: 292 GLDQSTIETFKKMELGESRRLSGTNG-----IVCPICLSEYASKETVRFIPECDHCFHVE 346
Query: 154 CVDAWLKLNGSCPVCRNS 171
C+D WLK++GSCP+CRNS
Sbjct: 347 CIDVWLKIHGSCPLCRNS 364
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GL + VINS+P F +++ V G C+ICL E++D E LR+MP C H FH C
Sbjct: 99 GLGKDVINSFPSFLYSQ--VKGLKIGKG-GVECAICLNEFEDEETLRLMPPCSHAFHASC 155
Query: 155 VDAWLKLNGSCPVCRNSPLPTPLS 178
+D WL +CPVCR S P P S
Sbjct: 156 IDVWLSSRSTCPVCRASLPPKPGS 179
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 83 ENRNQDDDNLVVGLDQAVINSYPKFQFT--KESVSGNNNSNNINTTCSICLCEYKDLEML 140
NR D + GLD AV+ S+P F ++ KES G+ + C+ICL E +D E +
Sbjct: 83 RNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKD-----LECAICLNELEDHETV 137
Query: 141 RMMPECRHYFHLCCVDAWLKLNGSCPVCRN 170
R++P C H FH+ C+D WL + +CPVCR+
Sbjct: 138 RLLPICNHLFHIDCIDTWLYSHATCPVCRS 167
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 95 GLDQAVINSYPKFQFT--------KESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPEC 146
GLD ++I ++P FQ++ KE++ CS+CL E++D E LR++P+C
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALE-----------CSVCLNEFEDDETLRLIPKC 163
Query: 147 RHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVP 186
H FH C+DAWL+ + +CP+CR +P P + + +P
Sbjct: 164 CHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSIQIP 203
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
G+D+ VI S+P F +++ N C+ICLCE++D E LR MP C H FH C
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGG---VECAICLCEFEDEEPLRWMPPCSHTFHANC 147
Query: 155 VDAWLKLNGSCPVCR 169
+D WL +CPVCR
Sbjct: 148 IDEWLSSRSTCPVCR 162
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 83 ENRNQDDDNLVV--------GLDQAVINSYPKFQFTKE--------SVSGNNNSNNINTT 126
R D D L+V GLD++VI + P F+F K + G +
Sbjct: 78 RRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQE 137
Query: 127 CSICLCEYKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCR 169
CS+CL E++D E LR++P C H FH+ C+D WL+ N +CP+CR
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 21 IAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIILPRIIFVAEDDG 80
+ IA+ F + + LLA+Y S + +N +E + IIL D
Sbjct: 61 LVIAI-FGIFATAFLLAAYYTLV---SKYCANDTTNEAASESGRSDIIL--------DVN 108
Query: 81 QEENRNQDD----DNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTT-CSICLCEYK 135
E +QDD ++ GLD +I F+ K + N IN T CSICL E+
Sbjct: 109 SPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKK-----HQNGFKINGTDCSICLGEFN 163
Query: 136 DLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLQEVV 185
+ E LR++P+C H FH+ C+D WLK + +CP+CR + P VV
Sbjct: 164 EDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVV 213
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 21 IAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIILPRIIFVAEDDG 80
+ I + FLV+ V I CRR+N+ + ++ IF + D
Sbjct: 53 VVITVLFLVIFFMVF--GSIFCRRSNAQFSRSS-------------------IFRSTDAD 91
Query: 81 QEENRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEML 140
E + GLD I ++P F +++ C++CLCE++D E L
Sbjct: 92 AESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGG---VECAVCLCEFEDDETL 148
Query: 141 RMMPECRHYFHLCCVDAWLKLNGSCPVCR 169
R+MP C H FH CVD WL + +CP+CR
Sbjct: 149 RLMPPCCHVFHADCVDVWLSEHSTCPLCR 177
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
G+D++VI S P F+F ++SG+ + C++CL ++ E+LR++P+C+H FH+ C
Sbjct: 120 GIDRSVIESLPVFRFG--ALSGHKD----GLECAVCLARFEPTEVLRLLPKCKHAFHVEC 173
Query: 155 VDAWLKLNGSCPVCR 169
VD WL + +CP+CR
Sbjct: 174 VDTWLDAHSTCPLCR 188
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTT-----CSICLCEYKDLEMLRMMPECRHY 149
GLDQA I++ P F + KE V C++CLCE+ + + LR++P C H
Sbjct: 107 GLDQAFIDALPVFHY-KEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHA 165
Query: 150 FHLCCVDAWLKLNGSCPVCRNS 171
FHL C+D WL+ N +CP+CR +
Sbjct: 166 FHLNCIDTWLQSNSTCPLCRGT 187
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLDQ+ I Y + + N C ICL EY E +R +PEC H FH C
Sbjct: 288 GLDQSTIEKYKTMELGESRRPPGTN----GIVCPICLSEYVSKETVRFIPECDHCFHAKC 343
Query: 155 VDAWLKLNGSCPVCRNS 171
+D WLK++GSCP+CRNS
Sbjct: 344 IDVWLKIHGSCPLCRNS 360
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLD +VI ++P F + S C +CL E++D E LR++P+C H FH C
Sbjct: 89 GLDASVIETFPTFPY---STVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGC 145
Query: 155 VDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQ 189
+DAWL+ +CP+CR + +P P + E+ L++
Sbjct: 146 IDAWLRSQTTCPLCRANLVPVPGESVSSEIPGLAR 180
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLD +V+ ++P F ++ C+ICL E++D E LR++P+C H FH C
Sbjct: 99 GLDVSVVETFPTFLYSDVK---TQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHC 155
Query: 155 VDAWLKLNGSCPVCR 169
+DAWL+ + +CPVCR
Sbjct: 156 IDAWLEAHVTCPVCR 170
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GL++ VI S+P F +++ V G C+ICL E++D E LR MP C H FH C
Sbjct: 94 GLEKEVIESFPTFLYSE--VKGLKIGKG-GVECAICLSEFEDQETLRWMPPCSHTFHANC 150
Query: 155 VDAWLKLNGSCPVCR 169
+D WL +CPVCR
Sbjct: 151 IDVWLSSWSTCPVCR 165
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLDQA+I++ P F + + + G + C++CLCE+ + + LR++P C H FH+ C
Sbjct: 118 GLDQALIDALPVFLY--KEIKGTKEPFD----CAVCLCEFSEDDKLRLLPNCSHAFHIDC 171
Query: 155 VDAWLKLNGSCPVCRNS 171
+D WL N +CP+CR +
Sbjct: 172 IDTWLLSNSTCPLCRGT 188
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLDQ I++ P F + ++S + C++CL E+ D + LR++P C H FHL C
Sbjct: 180 GLDQTAIDALPVFLYGNVTISLEQPFD-----CAVCLNEFSDTDKLRLLPVCSHAFHLHC 234
Query: 155 VDAWLKLNGSCPVCRNS 171
+D WL N +CP+CR S
Sbjct: 235 IDTWLLSNSTCPLCRRS 251
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 95 GLDQAVINSYPKFQFTK-ESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLC 153
GL + + S P+ FT ES SG +T C+ICL ++ D E +R++P C H FH+
Sbjct: 69 GLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVE 128
Query: 154 CVDAWLKLNGSCPVCRN 170
C+D WL SCP CR
Sbjct: 129 CIDKWLVSRSSCPSCRR 145
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLD +I S+P F ++ + N T C+ICL E+ D + +R++ CRH FH C
Sbjct: 77 GLDPFIIRSFPVFHYSSAT------KKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNC 130
Query: 155 VDAWLKLNGSCPVCR 169
+D W +L+ +CPVCR
Sbjct: 131 IDLWFELHKTCPVCR 145
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTT----CSICLCEYKDLEMLRMMPECRHYF 150
GLD +VI + P F ++ + +G + C++CL E+++ + +R +P C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 151 HLCCVDAWLKLNGSCPVCRNSPLPTP-LSTPLQEVVPL 187
HL C+D WL+ + +CP+CR + L + + TP+ VPL
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPL 217
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
G+DQ+ I++ P F + +S+ G N C++CLCE++ + LR++P+C H FH+ C
Sbjct: 107 GVDQSFIDTLPVFHY--KSIIG---LKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDC 161
Query: 155 VDAWLKLNGSCPVCR 169
+D WL + +CP+CR
Sbjct: 162 IDTWLLSHSTCPLCR 176
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GL +A I P ++F NN + T C +C+C+++ ++LR++P C H FH C
Sbjct: 437 GLTKADIEQLPSYRFNP------NNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKC 489
Query: 155 VDAWLKLNGSCPVCR 169
VD WLK N +CP+CR
Sbjct: 490 VDKWLKANRTCPICR 504
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GL+ ++I S P F F+ + CS+CL E+KD E R+MP C+H FH+ C
Sbjct: 51 GLNPSIIKSLPIFTFSAVTAL-------FAMECSVCLSEFKDNESGRVMPNCKHTFHVHC 103
Query: 155 VDAWLKLNGSCPVCRN--SPLPTPLSTPLQEVV 185
+D W + SCP+CR+ P + + + EV
Sbjct: 104 IDMWFHSHSSCPLCRSQIEPFAGGVKSSMDEVA 136
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLD VI S P F V G N + T C++CL ++ + RM+P C+H FH+ C
Sbjct: 75 GLDSLVIASLPTF------VVGIKN-DVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSC 127
Query: 155 VDAWLKLNGSCPVCRNSPLPT-------PLSTPLQEVVPLSQYAA 192
VD WL +CPVCR P+ P P+ + P +A
Sbjct: 128 VDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVGDFAPPLDFAG 172
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLD I S+P F +T+ + C +CL E+KD E LR++P C H FH C
Sbjct: 56 GLDAEAIKSFPSFVYTE---ARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADC 112
Query: 155 VDAWLKLNGSCPVCRNSPLP 174
VD WL + +CP+CR +P
Sbjct: 113 VDIWLSHSSTCPICRAKVVP 132
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 84 NRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMM 143
R + + GLD I ++P F +++ C+ICL E++D E LR++
Sbjct: 84 RRRVTNATVARGLDAETIETFPTFVYSEVK---TQKIGKGALECAICLNEFEDDETLRLL 140
Query: 144 PECRHYFHLCCVDAWLKLNGSCPVCR-----NSPLP-----TPLSTPLQEVVPL 187
P+C H FH C+ AWL+ + +CPVCR +P P T L Q VP+
Sbjct: 141 PKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVETDLEAQQQSAVPV 194
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 21 IAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIILPRIIFVAEDDG 80
I I L+L+S L S C R + +S + N + N F +
Sbjct: 62 IGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEG------------FFSST-- 107
Query: 81 QEENRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEML 140
Q + N D GL++++I S +++ SG+ + + CS+CL E+++ E L
Sbjct: 108 QRISTNGD------GLNESMIKSITVYKYK----SGDGFVDG--SDCSVCLSEFEENESL 155
Query: 141 RMMPECRHYFHLCCVDAWLKLNGSCPVCR 169
R++P+C H FHL C+D WLK + +CP+CR
Sbjct: 156 RLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GL + V+ S PK F+ ES + C+ICL E+ + LR++P+C H FH+ C
Sbjct: 84 GLKKKVLQSLPKLTFSPESPESEKFAE-----CAICLAEFSAGDELRVLPQCGHGFHVAC 138
Query: 155 VDAWLKLNGSCPVCRN 170
+D WL + SCP CR
Sbjct: 139 IDTWLGSHSSCPSCRQ 154
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 21 IAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNNSVSNDGIILPRIIFVAEDDG 80
I I +L+S L S C RR HNS++ N +S+D + ++G
Sbjct: 64 IGILASAFILVSYYTLISKYCHRRR---HNSSSTSAAAINRISSD--YTWQGTNNNNNNG 118
Query: 81 QEENRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEML 140
GLD+++I S +++ K + G S++ CS+CL E+++ E L
Sbjct: 119 ATNPNQTIGGGGGDGLDESLIKSITVYKYRK--MDGFVESSD----CSVCLSEFQENESL 172
Query: 141 RMMPECRHYFHLCCVDAWLKLNGSCPVCR 169
R++P+C H FH+ C+D WLK + +CP+CR
Sbjct: 173 RLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
G+DQ++I++ P F + +S+ G S C +CLCE++ + LR++P+C H FH+ C
Sbjct: 99 GVDQSLIDTLPVFHY--KSIVGLKISP---FDCPVCLCEFETEDKLRLLPKCSHAFHVEC 153
Query: 155 VDAWLKLNGSCPVCRNSPL 173
+D WL + +CP+CR++ L
Sbjct: 154 IDTWLLSHSTCPLCRSNLL 172
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GL++ ++ S+P F +++ V G C+ICL E+ D E LR MP C H FH C
Sbjct: 94 GLEKELVESFPIFLYSE--VKGLKIGKG-GVECAICLSEFVDKETLRWMPPCSHTFHANC 150
Query: 155 VDAWLKLNGSCPVCR 169
+D WL +CP CR
Sbjct: 151 IDVWLSSQSTCPACR 165
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GLD VI S P F F+ E+ + C++CL E+++ E R++P C+H FH+ C
Sbjct: 94 GLDPNVIKSLPVFTFSDET-------HKDPIECAVCLSEFEESETGRVLPNCQHTFHVDC 146
Query: 155 VDAWLKLNGSCPVCRN 170
+D W + +CP+CR+
Sbjct: 147 IDMWFHSHSTCPLCRS 162
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 86 NQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPE 145
N+DDD+ GL + I++ F + N+ TCS+C+ EY + LR +P
Sbjct: 536 NEDDDDQPRGLTKEQIDNLSTRNFGE---------NDALKTCSVCITEYTEGNKLRKLP- 585
Query: 146 CRHYFHLCCVDAWLKLNGSCPVCRNSPL 173
C H +H+ C+D WL N +CP+CR + L
Sbjct: 586 CSHEYHIHCIDRWLSENSTCPICRRAVL 613
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
GL +A I P ++F +N + T C +C+C+++ ++LR++P C H FH C
Sbjct: 440 GLTKADIEQLPSYRFNP------SNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKC 492
Query: 155 VDAWLKLNGSCPVCR 169
VD WLK N +CP+CR
Sbjct: 493 VDKWLKGNRTCPICR 507
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 95 GLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCC 154
LDQAV++ P F ++ S N CS+CL E+++ + R++P+C H FH+ C
Sbjct: 80 ALDQAVLDKIPIFVYS----SKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDC 135
Query: 155 VDAWLKLNGSCPVCRNSPLPTPLSTPLQEV 184
+D W + +CP+CR P+ P Q +
Sbjct: 136 IDTWFRSRSTCPLCR-----APVQPPFQVI 160
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 76 AEDDGQEENRNQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTT--CSICLCE 133
A D +++ + D GL ++ PK +++GNNN++ T CS+CL +
Sbjct: 148 AVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKM-----TITGNNNTDASENTDSCSVCLQD 202
Query: 134 YKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCR 169
++ E +R +P C H FHL C+D WL +GSCP+CR
Sbjct: 203 FQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCR 238
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 86 NQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPE 145
N+DDD+ GL + I++ F + N+ TCS+C+ EY + LR +P
Sbjct: 553 NEDDDDQPRGLTKEQIDNLSTRNFGE---------NDALKTCSVCITEYTEGNKLRKLP- 602
Query: 146 CRHYFHLCCVDAWLKLNGSCPVCRNSPL 173
C H +H+ C+D WL N +CP+CR + L
Sbjct: 603 CSHEYHVHCIDRWLSENSTCPICRRAVL 630
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 86 NQDDDNLVVGLDQAVINSYPKFQFTKESVSGNNNSNNINTTCSICLCEYKDLEMLRMMPE 145
N+DDD+ GL + I++ F + N+ TCS+C+ EY + LR +P
Sbjct: 538 NEDDDDQPRGLTKEQIDNLAMRSFGE---------NDALKTCSVCITEYTEGNKLRKLP- 587
Query: 146 CRHYFHLCCVDAWLKLNGSCPVCRNSPLPT 175
C H +H+ C+D WL N +CP+CR + L +
Sbjct: 588 CSHEYHVHCIDRWLSENSTCPICRRAVLAS 617
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 93 VVGLDQAVINSYPKFQFTKES--VSGNNNSNNINTTCSICLCEYKDLEMLRMMPECRHYF 150
VGL ++ INS F K + G T CS+CL E+++ E LR++P+C H F
Sbjct: 107 TVGLHRSAINSITVVGFKKGEGIIDG--------TECSVCLNEFEEDESLRLLPKCSHAF 158
Query: 151 HLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLQEV----VPLSQYAADRRRR 197
HL C+D WL + +CP+CR +P+ P QE P S+ + D R R
Sbjct: 159 HLNCIDTWLLSHKNCPLCR-APVLLITEPPHQETETNHQPDSESSNDLRGR 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,869,877
Number of Sequences: 539616
Number of extensions: 3360299
Number of successful extensions: 49320
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 501
Number of HSP's that attempted gapping in prelim test: 22998
Number of HSP's gapped (non-prelim): 14736
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)