BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029208
(197 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
+ ++F + L++AG++LV+++FY TWC C+ + PKL ++ ++VFLKV+ DE +
Sbjct: 5 VKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECED 64
Query: 157 MCKSLNVKVLPYFHFYRGAHGQLESFS 183
+ + + +P F F + +L+S S
Sbjct: 65 IAQDNQIACMPTFLFMKNGQ-KLDSLS 90
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDAQD 64
Query: 157 MCKSLNVKVLPYFHFYR 173
+ VK P F F++
Sbjct: 65 VASEAEVKATPTFQFFK 81
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASEXEVKCMPTFQFFKKGQ 84
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASESEVKSMPTFQFFKKGQ 84
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASECEVKCMPTFQFFKKGQ 84
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASECEVKSMPTFQFFKKGQ 84
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC + + P +E++ ++FL+V+ D+++
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDSQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASESEVKSMPTFQFFKKGQ 84
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK P F F++
Sbjct: 65 VASECEVKCTPTFQFFKKGQ 84
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC + + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPAKMIKPFFHSLSEKYSNVIFLEVDVDDAQD 64
Query: 157 MCKSLNVKVLPYFHFYR 173
+ VK P F F++
Sbjct: 65 VASEAEVKATPTFQFFK 81
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ ++ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVNDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASECEVKCMPTFQFFKKGQ 84
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
+ S E+ AL+ +GD+LV+V+F+ TWC C+ + P + + AE++ + F K++ DE
Sbjct: 12 LKSASEYDSALA-SGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSD 70
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ + V +P FY+G
Sbjct: 71 VAQKAEVSSMPTLIFYKGGK 90
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
+ S E+ AL+ +GD+LV+V+F+ TWC C+ + P + + AE++ + F K++ DE
Sbjct: 5 LKSASEYDSALA-SGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSD 63
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ + V +P FY+G
Sbjct: 64 VAQKAEVSSMPTLIFYKGGK 83
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 93 NMIDIHSTQEFLEALSQA--GDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVN 150
+I +HS +++ + +A +LV+++F +WC CR + P A++ P VFLKV+
Sbjct: 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVD 72
Query: 151 FDENKPMCKSLNVKVLPYFHFYR 173
DE KP+ + +V+ +P F F +
Sbjct: 73 VDELKPIAEQFSVEAMPTFLFMK 95
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC + + P +E++ ++FL+V+ D+ +
Sbjct: 16 IESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 75
Query: 157 MCKSLNVKVLPYFHFYR 173
+ VK +P F F++
Sbjct: 76 VASECEVKSMPTFQFFK 92
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 94 MIDIHSTQEFLEALSQAGD--RLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNF 151
+I H+ QEF ++ D +LVI++F +WC CR + P A++ P +FLKV+
Sbjct: 8 VIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDV 67
Query: 152 DENKPMCKSLNVKVLPYFHFYR 173
DE K + ++ NV+ +P F F +
Sbjct: 68 DELKDVAEAYNVEAMPTFLFIK 89
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC + + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASECEVKRMPTFQFFKKGQ 84
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
+ S E+ AL+ +GD+LV+V+F+ TWC + + P + + AE++ + F K++ DE
Sbjct: 13 LKSASEYDSALA-SGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEVSD 71
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ + V +P FY+G
Sbjct: 72 VAQKAEVSSMPTLIFYKGGK 91
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDAQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
+ ++ +P ++ GQL+ F
Sbjct: 65 VAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 101
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
+ S E+ AL+ +GD+LV+V+F+ TWC + + P + + AE++ + F K++ DE
Sbjct: 5 LKSASEYDSALA-SGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEVSD 63
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ + V +P FY+G
Sbjct: 64 VAQKAEVSSMPTLIFYKGGK 83
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 93 NMIDIHSTQEFLEALSQA--GDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVN 150
+I +HS +++ + +A +LV+++F +WC R + P A++ P VFLKV+
Sbjct: 16 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPSRIMAPVFADLAKKFPNAVFLKVD 75
Query: 151 FDENKPMCKSLNVKVLPYFHFYR 173
DE KP+ + +V+ +P F F +
Sbjct: 76 VDELKPIAEQFSVEAMPTFLFMK 98
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TW + + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWSGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASECEVKCMPTFQFFKKGQ 84
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 103 FLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD-ENKPMCKSL 161
F + AGD+ V+++ + WC C+A+ PK + AEE+ +++FLK++ + ENK + K L
Sbjct: 16 FWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKEL 75
Query: 162 NVKVLPYFHFYR 173
++V+P F +
Sbjct: 76 GIRVVPTFKILK 87
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 103 FLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD-ENKPMCKSL 161
F + AGD+ V+++ + WC C+A+ PK + AEE+ +++FLK++ + ENK + K L
Sbjct: 28 FWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKEL 87
Query: 162 NVKVLPYFHFYR 173
++V+P F +
Sbjct: 88 GIRVVPTFKILK 99
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 94 MIDIHSTQEFLEALSQAGD--RLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNF 151
+I H+ EF +++A + ++VI++F +WC CR + P A++ P VFLKV+
Sbjct: 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 75
Query: 152 DENKPMCKSLNVKVLPYFHFYR 173
DE K + + NV+ +P F F +
Sbjct: 76 DELKEVAEKYNVEAMPTFLFIK 97
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
I S F EAL AGD+LV+V+F TWC C+ + P +E++ ++FL+V+ D+ +
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDXQD 64
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
+ VK +P F F++
Sbjct: 65 VASEXEVKCMPTFQFFKKGQ 84
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 107 LSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVL 166
+++ RL++V+F+ WC CR + PK+ A+E PE+ F KV+ D+N+ +V +
Sbjct: 14 INENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAM 73
Query: 167 PYFHFYRGAHGQLESFS 183
P F F + +++ FS
Sbjct: 74 PTFVFIKDGK-EVDRFS 89
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 103 FLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD-ENKPMCKSL 161
F + AGD+ V+++ + WC +A+ PK + AEE+ +++FLK++ + ENK + K L
Sbjct: 15 FWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKEL 74
Query: 162 NVKVLPYFHFYR 173
++V+P F +
Sbjct: 75 GIRVVPTFKILK 86
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 98 HSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPM 157
+ EF A++Q D+LV+V+FY TWC C+ + P + + +E++P+ F K++ DE +
Sbjct: 6 KTASEFDSAIAQ--DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDV 63
Query: 158 CKSLNVKVLPYFHFYRGAH 176
+ V +P ++
Sbjct: 64 AQKNEVSAMPTLLLFKNGK 82
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 98 HSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPM 157
+ EF A++Q D+LV+V+FY TWC C+ + P + + +E++P+ F K++ DE +
Sbjct: 12 KTASEFDSAIAQ--DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDV 69
Query: 158 CKSLNVKVLPYFHFYRGAH 176
+ V +P ++
Sbjct: 70 AQKNEVSAMPTLLLFKNGK 88
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 107 LSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKV 165
L++A +LV+++F+ TWC C+ + PKL + + + +V LKV+ DE + + N+
Sbjct: 20 LTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISS 79
Query: 166 LPYFHFYRGAHGQLESFSCSLAK 188
+P F F + ++E F+ + AK
Sbjct: 80 MPTFVFLKNGV-KVEEFAGANAK 101
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 107 LSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKV 165
L++A +LV+++F+ TWC C+ + PKL + + + +V LKV+ DE + + N+
Sbjct: 15 LTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISS 74
Query: 166 LPYFHFYRGAHGQLESFSCSLAK 188
+P F F + ++E F+ + AK
Sbjct: 75 MPTFVFLKNGV-KVEEFAGANAK 96
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 93 NMIDIHSTQEFLEALSQAGDR--LVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVN 150
+I H+ + + E L +A + LV+V+F +WC CR + P A++ P ++FLKV+
Sbjct: 17 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 76
Query: 151 FDENKPMCKSLNVKVLPYFHFYR 173
DE K + ++ +P F F +
Sbjct: 77 TDELKSVASDWAIQAMPTFMFLK 99
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 108 SQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLP 167
+ +L++V+F +WC C+ + P A++ P + FLKV+ DE K + + NV+ +P
Sbjct: 22 GKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMP 81
Query: 168 YFHFYRGAHGQLESFSCSLAKVMLRILI 195
F F + G+L + K L L+
Sbjct: 82 TFIFLK--DGKLVDKTVGADKDGLPTLV 107
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 102 EFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSL 161
EF + Q D+LVI +FY TWC C+ + P L + + +P++ F+K + DE+ + K
Sbjct: 22 EFRNLIKQ-NDKLVI-DFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKEC 79
Query: 162 NVKVLPYFHFYRGAHGQL 179
V +P F G GQL
Sbjct: 80 EVTAMPTFVL--GKDGQL 95
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 94 MIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDE 153
+I++ + L Q ++LV+V+F+ TWC C+ + P L + E + +F+KV+ D+
Sbjct: 6 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAP-LFKELSEKYDAIFVKVDVDK 64
Query: 154 NKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKV 189
+ + N+ +P F + + S+AKV
Sbjct: 65 LEETARKYNISAMPTFIAIKNGEKVGDVVGASIAKV 100
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 93 NMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD 152
+I++ + L Q ++LV+V+F+ TWC C+ + P L + E + +F+KV+ D
Sbjct: 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAP-LFKELSEKYDAIFVKVDVD 72
Query: 153 ENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKV 189
+ + + N+ +P F + + S+AKV
Sbjct: 73 KLEETARKYNISAMPTFIAIKNGEKVGDVVGASIAKV 109
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 98 HSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPM 157
+ EF A++Q D+LV+V+FY TWC + + P + + +E++P+ F K++ DE +
Sbjct: 12 KTASEFDSAIAQ--DKLVVVDFYATWCGPSKMIAPMIEKFSEQYPQADFYKLDVDELGDV 69
Query: 158 CKSLNVKVLPYFHFYR 173
+ V +P ++
Sbjct: 70 AQKNEVSAMPTLLLFK 85
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 94 MIDIHSTQ-EFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD 152
M+ I ++Q EF +SQ + LVIV+F+ WC C+ + P ++ + ++VF+KV+ D
Sbjct: 9 MVKIVTSQAEFDSIISQ--NELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVD 66
Query: 153 ENKPMCKSLNVKVLPYFHFYRGAHG 177
E + + N+ +P F Y+
Sbjct: 67 EVSEVTEKENITSMPTFKVYKNGSS 91
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEE--HPEIVFLKVNFDEN 154
I S +F + GD++V+++F+ TWC C+ + P + ++ ++ F KV+ DE
Sbjct: 20 ISSYDQFKQVT--GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ 77
Query: 155 KPMCKSLNVKVLPYFHFYRGAH 176
+ + + ++ +P F F++
Sbjct: 78 SQIAQEVGIRAMPTFVFFKNGQ 99
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 98 HSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKP 156
H T + E D+ V+V+F+ WC CR + P L A E+ + I +K+N DEN
Sbjct: 9 HVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG 68
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
V +P + Y+G
Sbjct: 69 TAAKYGVMSIPTLNVYQGGE 88
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 111 GDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKVLPYF 169
GD+ V+V+F+ WC CR + P L AE H + + K+N DEN + +P
Sbjct: 16 GDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTL 75
Query: 170 HFYRGAH 176
++G
Sbjct: 76 ILFKGGE 82
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKP 156
+ S +F LS AG RL +V+F C C + P + ++P+ VFL+V+ + +
Sbjct: 6 VGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQG 65
Query: 157 MCKSLNVKVLPYFHFYR 173
+ N+ P F F+R
Sbjct: 66 TAATNNISATPTFQFFR 82
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 111 GDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKVLPYF 169
GD+ V+V+F+ WC CR + P L AE H + + K+N DEN + +P
Sbjct: 16 GDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTL 75
Query: 170 HFYRGAH 176
++G
Sbjct: 76 ILFKGGR 82
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 110 AGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYF 169
A + +V+F+ WCA C L P + AE++P++ F K+N DEN + V LP
Sbjct: 14 ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTV 73
Query: 170 HFYRGAH 176
F++
Sbjct: 74 IFFKDGE 80
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 92 PNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNF 151
P+++D++S ++F +S+ D L + F WC C+ + + + A E P + F KV+
Sbjct: 19 PSVVDVYSVEQFRNIMSE--DILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDA 76
Query: 152 DENKPMCKSLNVKVLPYFHFYRGAH--GQLESFSCSLAKVMLRILIQ 196
D N + V LP F R G + + + + LR +I+
Sbjct: 77 DNNSEIVSKCRVLQLPTFIIARSGKMLGHVIGANPGMLRQKLRDIIK 123
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 94 MIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDE 153
++ + T E L + LV+V+F+ TWC C+ L L AE + ++ F+KV+ D+
Sbjct: 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDK 64
Query: 154 NKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKVMLRI 193
N + V +P F + ++++ + + RI
Sbjct: 65 NGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADVSRI 104
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 111 GDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKVLPYF 169
GD V+V+F+ WC CR + P L AE H + + K+N DEN + +P
Sbjct: 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTL 75
Query: 170 HFYRGAH 176
++G
Sbjct: 76 ILFKGGE 82
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 111 GDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKVLPYF 169
GD V+V+F+ WC CR + P L AE H + + K+N DEN + +P
Sbjct: 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTL 75
Query: 170 HFYRGAH 176
++G
Sbjct: 76 ILFKGGR 82
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 112 DRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHF 171
+++V+V+F+ WCA C L P + A ++P++ F K+N +E++ + + LP F
Sbjct: 23 NKIVVVDFWAEWCAPCLILAPVIEELANDYPQVAFGKLNTEESQDIAMRYGIMSLPTIMF 82
Query: 172 YRGAH 176
++
Sbjct: 83 FKNGE 87
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 73 KVHATLAETNQPKWWEKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFP 132
++ A + E +QP W P + + + + F E ++ A +++VEFY WC C+ L P
Sbjct: 112 EIVAKVREVSQPDW--TPPPEVTLVLTKENFDEVVNDAD--IILVEFYAPWCGHCKKLAP 167
Query: 133 KLCRTAEE----HPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 173
+ + A+E P I KV+ + K +V P +R
Sbjct: 168 EYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFR 212
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 110 AGDRLVIVEFYGTWCASCRALFPKLCRTA----EEHPEIVFLKVNFDENKPMCKSLNVKV 165
A V++EFY WC C+ P+ + A ++ P I K++ + +V
Sbjct: 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG 89
Query: 166 LPYFHF--------YRGAHGQLE 180
P Y G+ Q E
Sbjct: 90 YPTIKILKKGQAVDYEGSRTQEE 112
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 103 FLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTA----EEHPEIVFLKVNFDENKPMC 158
F EAL A + ++VEFY WC C+AL P+ + A E EI KV+ E +
Sbjct: 17 FAEAL--AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLA 74
Query: 159 KSLNVKVLPYFHFYR 173
+ V+ P F+R
Sbjct: 75 QQYGVRGYPTIKFFR 89
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 97 IHSTQEFLEALSQAG--DRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDEN 154
I + + + + LS+A ++V+ F WC C+ + P +E +P ++FL ++ DE
Sbjct: 29 ITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDEL 88
Query: 155 KPMCKSLNVKVLPYFHFYRGAH 176
S +K P F F R
Sbjct: 89 SDFSASWEIKATPTFFFLRDGQ 110
>pdb|3KH7|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Reduced Ccmg From Pseudomonas Aeruginosa
pdb|3KH9|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Oxidized Ccmg From Pseudomonas Aeruginosa
Length = 176
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 96 DIHSTQEFLEALSQAG--DRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNF-D 152
D+ S Q+ L++A + +V +GTWC SCR P+L R AE+ +V +N+ D
Sbjct: 40 DLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQG--VVIYGINYKD 97
Query: 153 ENKPMCKSLNVKVLPYFHFYRGAHGQL 179
+N K LN PY A G L
Sbjct: 98 DNAAAIKWLNELHNPYLLSISDADGTL 124
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 97 IHSTQEFLEALSQAG--DRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDEN 154
I + + + + LS+A ++V+ F WC R + P +E +P ++FL ++ DE
Sbjct: 29 ITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDEL 88
Query: 155 KPMCKSLNVKVLPYFHFYRGAH 176
S +K P F F R
Sbjct: 89 SDFSASWEIKATPTFFFLRDGQ 110
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENK 155
I++T E L+ L Q D +++F+ WC CR+ P TA E ++ F+KVN +
Sbjct: 41 INATAETLDKLLQ-DDLPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP 99
Query: 156 PMCKSLNVKVLPYFHFYRGAH 176
+ ++ +P YR
Sbjct: 100 ALSTRFRIRSIPTIXLYRNGK 120
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF-SCSLA 187
++ +P ++ GQL+ F C+LA
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKCFLDCNLA 108
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 92 PNMIDIHSTQ-EFLEALSQA----------GDRLVIVEFYGTWCASCRALFPKLCRTAEE 140
P IH T+ EFL+ ++ GD+ IV+FY WC C+ + P L ++E
Sbjct: 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKE 79
Query: 141 HPEIVFL-KVNFDENKPMCKSLNVKVLPYFHF 171
+ +++ KVN D+ + + ++ +P F
Sbjct: 80 YAGKIYIYKVNVDKEPELARDFGIQSIPTIWF 111
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T E + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDESFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L AEE+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + E D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFETDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 92 PNMIDIHSTQ-EFLEALSQA----------GDRLVIVEFYGTWCASCRALFPKLCRTAEE 140
P IH T+ EFL+ ++ GD+ IV+FY WC C+ + P L ++E
Sbjct: 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKE 79
Query: 141 HPEIVFL-KVNFDENKPMCKSLNVKVLPYFHF 171
+ +++ KVN D+ + + ++ +P F
Sbjct: 80 YAGKIYIYKVNVDKEPELARDFGIQGIPTIWF 111
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 94 MIDIHSTQEFLE-ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEE--HPEIVFLKVN 150
+I+I+ ++F + AGD+L+++ F+ +W C+AL + E + + FL ++
Sbjct: 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSID 61
Query: 151 FDENKPMCKSLNVKVLPYF 169
DEN + + + +PYF
Sbjct: 62 ADENSEISELFEISAVPYF 80
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T++ + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTEDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHVTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 111 GDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYF 169
GD+ IV+FY WC C+ + P L A+E+ +IV KV+ ++ + + + ++ +P
Sbjct: 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSI 96
Query: 170 HF 171
F
Sbjct: 97 LF 98
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRSIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGDVAATKVGALSKGQLKEF 102
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAACKVGALSKGQLKEF 102
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH 176
++ +P ++
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGE 85
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 99 STQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPM 157
+ Q F E L Q LV+V+F+ WCA CR + P L A+E+ +++ K++ DEN
Sbjct: 8 TDQNFDETLGQHP--LVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKT 65
Query: 158 CKSLNVKVLPYFHFYRGAH 176
V +P ++
Sbjct: 66 AXRYRVXSIPTVILFKDGQ 84
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 99 STQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPM 157
+ Q F E L Q LV+V+F+ WCA CR + P L A+E+ +++ K++ DEN
Sbjct: 7 TDQNFDETLGQHP--LVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKT 64
Query: 158 CKSLNVKVLPYFHFYRGAH 176
V +P ++
Sbjct: 65 AXRYRVXSIPTVILFKDGQ 83
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 114 LVIVEFYGTWCASCRALFPKLCRTAEE----HPEIVFLKVNFDENKPMCKSLNVKVLPYF 169
+++VEFY WC C+ L P+ + A+E P I KV+ E + K +V P
Sbjct: 26 IILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSGYPTL 85
Query: 170 HFYR 173
+R
Sbjct: 86 KIFR 89
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 110 AGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPY 168
AG L +V+F+ WC CR + P L A +H + +KVN DE+ + V+ +P
Sbjct: 48 AGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPT 107
Query: 169 FHFYR 173
+R
Sbjct: 108 LVLFR 112
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+++ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 115 VIVEFYGTWCASCRALFPKLCR-TAEEHPEIVFLKVNFDENKPMCKSLNVKVLP 167
V+V+F+ WC C+ L P+L + A++H ++V KV+ D++ + V +P
Sbjct: 34 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVP 87
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 6 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 65
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ P ++ GQL+ F
Sbjct: 66 GTAPKYGIRGTPTLLLFKNGEVAATKVGALSKGQLKEF 103
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 13/114 (11%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 15 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 74
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF-SCSLAKVMLRILIQV 197
++ +P ++ GQL+ F +LA + + V
Sbjct: 75 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMV 128
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 114 LVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFY 172
LV+V+F+ WC C+ + P L +E ++ KVN D+N + V+ +P
Sbjct: 22 LVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81
Query: 173 R 173
R
Sbjct: 82 R 82
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WCA + + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 68 RLISFKVHATLAETNQPKWWEKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASC 127
R + K+ L P+ W+K ++ + E ++ + V VEFY WC C
Sbjct: 227 RFLEGKIKPHLMSQELPEDWDKQPVKVL----VGKNFEDVAFDEKKNVFVEFYAPWCGHC 282
Query: 128 RALFP---KLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFY 172
+ L P KL T ++H IV K++ N+ +++ V P F+
Sbjct: 283 KQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFF 328
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC + + P L A+E+ ++ K+N D+N
Sbjct: 25 IHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNP 84
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 85 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 122
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 173
V+V+F+ WC C+ + P + A+E+ +I K+N DE + N++ +P F++
Sbjct: 20 VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 79
Query: 174 GAHGQLESFSCSLAKVMLRILIQ 196
+ ES ++ K L I+
Sbjct: 80 NGERK-ESIIGAVPKSTLTDSIE 101
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 173
V+V+F+ WC C+ + P + A+E+ +I K+N DE + N++ +P F++
Sbjct: 21 VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80
Query: 174 GAHGQLESFSCSLAKVMLRILIQ 196
+ ES ++ K L I+
Sbjct: 81 NGERK-ESIIGAVPKSTLTDSIE 102
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC + + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 99 STQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE--IVFLKVNFDENKP 156
+T F E + Q+ D LV+ EF+ WC C+ + P+ + AE E I +++ EN+
Sbjct: 20 ATDSFNEYI-QSHD-LVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQD 77
Query: 157 MCKSLNVKVLPYFHFYRGA 175
+C N+ P ++ +
Sbjct: 78 LCMEHNIPGFPSLKIFKNS 96
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENK 155
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDLVKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64
Query: 156 PMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
+ +P ++ GQL+ F
Sbjct: 65 GTAPKYIERGIPTLLLFKNGEVAATKVGALSKGQLKEF 102
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 110 AGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPY 168
+ ++ V+V+F+ TWC C+ + P L A E ++ K++ D N ++ V +P
Sbjct: 28 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPT 87
Query: 169 FHFYRGAH 176
++
Sbjct: 88 LILFKDGQ 95
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCAS-CRALFPKLCRTAEEH-PEIVFLKVNFDEN 154
IH T + + D ++V+F+ WC C+ + P L A+E+ ++ K+N D+N
Sbjct: 5 IHLTDDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQN 64
Query: 155 KPMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ +P ++ GQL+ F
Sbjct: 65 PGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 103
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 110 AGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPY 168
+ ++ V+V+F+ TWC C+ + P L A E ++ K++ D N ++ V +P
Sbjct: 23 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPT 82
Query: 169 FHFYRGAH 176
++
Sbjct: 83 LILFKDGQ 90
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 115 VIVEFYGTWCASCRALFP---KLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHF 171
V VEFY WC C+ L P KL T ++H IV K++ N+ +++ V P F
Sbjct: 28 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKF 85
Query: 172 Y 172
+
Sbjct: 86 F 86
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKVLPYFHFYR 173
V+V+F+ WC CR + P + A E+ + + +K+N DE+ + ++ +P ++
Sbjct: 22 VLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81
Query: 174 GAH 176
G
Sbjct: 82 GGK 84
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 112 DRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLK-VNFDENKPMCKSLNVKVLPYFH 170
D L +VEFY WC C+ L P+ + A ++V + VN D+++ + V+ P
Sbjct: 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIK 94
Query: 171 FYRGAHGQLESF 182
+ + E +
Sbjct: 95 IFGANKNKPEDY 106
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYRG 174
+V+F+ TWC SC+ + P L A ++ + LK++ DEN V +P ++
Sbjct: 23 LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 82
Query: 175 AH 176
Sbjct: 83 GQ 84
>pdb|1UC7|A Chain A, Crystal Structure Of Dsbdgamma
pdb|1UC7|B Chain B, Crystal Structure Of Dsbdgamma
Length = 125
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 93 NMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLC----RTAEEHPEIVFLK 148
N I + E +AL +A + V+++ Y WC +C+ F K + + + V L+
Sbjct: 9 NFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKE-FEKYTFSDPQVQKALADTVLLQ 67
Query: 149 VNFDENK----PMCKSLNVKVLPYFHFYRGAHGQ 178
N N + K LNV LP F+ G GQ
Sbjct: 68 ANVTANDAQDVALLKHLNVLGLPTILFFDG-QGQ 100
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 173
V+V+F+ WC + + P + A+E+ +I K+N DE + N++ +P F++
Sbjct: 21 VMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80
Query: 174 GAHGQLESFSCSLAKVMLRILIQ 196
+ ES ++ K L I+
Sbjct: 81 NGERK-ESIIGAVPKSTLTDSIE 102
>pdb|2FWE|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd (Oxidized Form)
pdb|2FWF|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Reduced Form)
pdb|2FWG|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Photoreduced
Form)
pdb|2FWH|A Chain A, Atomic Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form At Ph7)
Length = 134
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 93 NMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLC----RTAEEHPEIVFLK 148
N I + E +AL +A + V+++ Y WC +C+ F K + + + V L+
Sbjct: 12 NFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKE-FEKYTFSDPQVQKALADTVLLQ 70
Query: 149 VNFDENK----PMCKSLNVKVLPYFHFYRG 174
N N + K LNV LP F+ G
Sbjct: 71 ANVTANDAQDVALLKHLNVLGLPTILFFDG 100
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 99 STQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMC 158
S +F E L L++V F+ W C + + A+E P++ F+K+ + +
Sbjct: 19 SAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVS 78
Query: 159 KSLNVKVLPYFHFYRGAH 176
+ + +P F F++ +
Sbjct: 79 EKYEISSVPTFLFFKNSQ 96
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 99 STQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMC 158
S +F E L L++V F+ W C + + A+E P++ F+K+ + +
Sbjct: 25 SAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVS 84
Query: 159 KSLNVKVLPYFHFYRGAH 176
+ + +P F F++ +
Sbjct: 85 EKYEISSVPTFLFFKNSQ 102
>pdb|3HDC|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 158
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 105 EALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP--EIVFLKVNFDENKPMCKSLN 162
++L+Q ++V+V F+ +WC CR P R + P ++V L VN ++ P K
Sbjct: 34 KSLAQYRGKIVLVNFWASWCPYCRDEXPSXDRLVKSFPKGDLVVLAVNVEKRFPE-KYRR 92
Query: 163 VKVLPYFHFYRGAHGQLE 180
V F+F A GQ++
Sbjct: 93 APV--SFNFLSDATGQVQ 108
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 173
++V+F TWC C+ + P + ++ +++FLKV+ D + ++ + +P FH Y+
Sbjct: 27 IVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYK 86
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYRG 174
+V+F+ TWC +C+ + P L A ++ + LK++ DEN V +P ++
Sbjct: 24 LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 175 AH 176
Sbjct: 84 GQ 85
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 111 GDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYF 169
++LV+V+ + WCA C P + AE++ + VF ++N DEN+ + +V +P
Sbjct: 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTT 79
Query: 170 HFYRGAHGQL 179
+ +GQL
Sbjct: 80 LIF--VNGQL 87
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
Length = 121
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 113 RLVIVEFYGTWCASCRALFPK------LCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVL 166
+ V++EFY WC C+AL PK L +E +V KV+ N ++
Sbjct: 26 KDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND---VPDEIQGF 82
Query: 167 PYFHFY-RGAHGQLESFSCS 185
P Y GA GQ ++S S
Sbjct: 83 PTIKLYPAGAKGQPVTYSGS 102
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENK 155
I T E E D+ V+V+F+ WC CR + P + A+E+ ++ +KVN DEN
Sbjct: 4 IEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP 63
Query: 156 PMCKSLNVKVLPYFHFYRGAH 176
++ +P ++
Sbjct: 64 NTAAQYGIRSIPTLLLFKNGQ 84
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 99 STQEFLEALSQAGDR-LVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFL-KVNFDENKP 156
+ F +S G L++VEF+ WC C+ L P+ A IV L KV+ N
Sbjct: 7 TDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTN 66
Query: 157 MCKSLNVKVLPYFHFYR 173
C V P +R
Sbjct: 67 TCNKYGVSGYPTLKIFR 83
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 110 AGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPY 168
+ ++ V+V+F+ TWC + + P L A E ++ K++ D N ++ V +P
Sbjct: 25 SSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPT 84
Query: 169 FHFYRGAH 176
++
Sbjct: 85 LILFKDGQ 92
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 173
++V F TWC C+ + P + ++ +++FLKV+ D + ++ + +P FH Y+
Sbjct: 27 IVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYK 86
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYRG 174
+V+F+ TWC C+ + P L A ++ + LK++ DEN V +P ++
Sbjct: 24 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 175 AH 176
Sbjct: 84 GQ 85
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 102 EFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAE---EHPEIVFLKVNFDENKPMC 158
E + + ++ V++EFY WC C+ L PK E + P IV K++ N +
Sbjct: 35 ENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAND-VP 93
Query: 159 KSLNVKVLPYFHF 171
V+ P +F
Sbjct: 94 SPYEVRGFPTIYF 106
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 116 IVEFYGTWCASCRAL---FPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFY 172
+VEFY WC C+ L F K + + ++ + + ++NK +C +V P +
Sbjct: 39 LVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98
Query: 173 R 173
R
Sbjct: 99 R 99
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 114 LVIVEFYGTWCASCRALFPKLCRTAEEHPE-IVFLKVNFDENKPMCKSLNVKVLP 167
++++ F+ WC +C ++ + + + + I LKV+ D+N+ + + +VK LP
Sbjct: 44 VIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLP 98
>pdb|3IOS|A Chain A, Structure Of Mtb Dsbf In Its Mixed Oxidized And Reduced
Forms
Length = 150
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKV-NFDENKPMCKSLN 162
++ F+ WC +C+ P + + A HPE+ F+ V D+ M + +N
Sbjct: 43 VLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVN 90
>pdb|1ZZO|A Chain A, Structure Of Mtb Dsbf In Its Oxidized Form
Length = 136
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKV-NFDENKPMCKSLN 162
++ F+ WC +C+ P + + A HPE+ F+ V D+ M + +N
Sbjct: 29 VLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVN 76
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 112 DRLVIVEFYGTWCASCRALFPKLCRTAE---EHPEIVFLKVNFDENKPMCKSLNVKVLPY 168
++ V++EFY WC C+ L PK E + P IV K++ N + V+ P
Sbjct: 370 NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAND-VPSPYEVRGFPT 428
Query: 169 FHF 171
+F
Sbjct: 429 IYF 431
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 99 STQEFLEALSQAGDR-LVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFL-KVNFDENKP 156
+ F +S G L++VEF+ WC + L P+ A IV L KV+ N
Sbjct: 7 TDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTN 66
Query: 157 MCKSLNVKVLPYFHFYRGAH 176
C V P +R
Sbjct: 67 TCNKYGVSGYPTLKIFRDGE 86
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 26/112 (23%)
Query: 97 IHSTQEFLEALSQAGDRLVIVEFYGTWC--------------ASCRALFPKLCRTAEEH- 141
IH T + + D ++V+F+ WC C+ + P L A+E+
Sbjct: 6 IHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ 65
Query: 142 PEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAH-----------GQLESF 182
++ K+N D+N ++ +P ++ GQL+ F
Sbjct: 66 GKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEF 117
>pdb|3HA9|A Chain A, The 1.7a Crystal Structure Of A Thioredoxin-like Protein
From Aeropyrum Pernix
Length = 165
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 106 ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNF 151
+L+ G +VI+ F WC SC + L R E++ EI + ++F
Sbjct: 31 SLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDF 76
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYRG 174
+V+F+ TWC + + + P L A ++ + LK++ DEN V +P ++
Sbjct: 24 LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 175 AH 176
Sbjct: 84 GQ 85
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/78 (19%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 95 IDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDEN 154
I++ +T + S + ++++F WC C + + + + + + ++ D +
Sbjct: 23 IELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKI-KEYFKNQLNYYYVTLVDIDVDIH 81
Query: 155 KPMCKSLNVKVLPYFHFY 172
+ N+K LP F FY
Sbjct: 82 PKLNDQHNIKALPTFEFY 99
>pdb|3Q6O|A Chain A, Oxidoreductase Fragment Of Human Qsox1
Length = 244
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 117 VEFYGTWCASCRALFPKLCRTAEE----HPEIVFLKVNFDE--NKPMCKSLNVKVLPYFH 170
VEF+ +WC C A P AE+ P + ++ E N +C+ N+ P
Sbjct: 35 VEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVR 94
Query: 171 FY 172
F+
Sbjct: 95 FF 96
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 113 RLVIVEFYGTWCASCRALFP---KLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYF 169
+ V++EFY WC C+ L P L + + ++V K++ N V+ P
Sbjct: 26 KDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85
Query: 170 HF 171
+F
Sbjct: 86 YF 87
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 106 ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHP--EIVFLKVNFDENKPMCKSLNV 163
+L+ + + ++ + TWC CR P L E++ +I F+ ++ D+NK +++
Sbjct: 24 SLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVT 83
Query: 164 K 164
K
Sbjct: 84 K 84
>pdb|3IA1|A Chain A, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
pdb|3IA1|B Chain B, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
Length = 154
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEE 140
++ F+ +WC C+A FP L R AEE
Sbjct: 34 VIVFWASWCTVCKAEFPGLHRVAEE 58
>pdb|2H1B|A Chain A, Resa E80q
pdb|2H1B|B Chain B, Resa E80q
pdb|2H1B|C Chain C, Resa E80q
pdb|2H1B|D Chain D, Resa E80q
Length = 143
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 90 NAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCR 136
+APN + + + +E LS + V + F+GTWC C+ FP +
Sbjct: 5 DAPNFVLEDTNGKRIE-LSDLKGKGVFLNFWGTWCEPCKKQFPYMAN 50
>pdb|3C73|A Chain A, Structure Of Cehc Variant Resa
pdb|3C73|B Chain B, Structure Of Cehc Variant Resa
Length = 140
Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 90 NAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCR 136
+APN + + + +E LS + V + F+GTWC C+ FP +
Sbjct: 2 DAPNFVLEDTNGKRIE-LSDLKGKGVFLNFWGTWCEHCKKEFPYMAN 47
>pdb|1ST9|A Chain A, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1ST9|B Chain B, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1SU9|A Chain A, Reduced Structure Of The Soluble Domain Of Resa
pdb|1SU9|B Chain B, Reduced Structure Of The Soluble Domain Of Resa
pdb|2H1D|A Chain A, Resa Ph 9.25
pdb|2H1D|B Chain B, Resa Ph 9.25
Length = 143
Score = 33.1 bits (74), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 90 NAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCR 136
+APN + + + +E LS + V + F+GTWC C+ FP +
Sbjct: 5 DAPNFVLEDTNGKRIE-LSDLKGKGVFLNFWGTWCEPCKKEFPYMAN 50
>pdb|3C71|A Chain A, Struture Of A Resa Variant With A Dsba-Like Active Site
Motif (Cphc)
Length = 143
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 90 NAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCR 136
+APN + + + +E LS + V + F+GTWC C+ FP +
Sbjct: 5 DAPNFVLEDTNGKRIE-LSDLKGKGVFLNFWGTWCPHCKKEFPYMAN 50
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 112 DRLVIVEFYGTWCASCRALFPKLCR-TAEEHPEIVFLK---VNFDENKPMCKSLNVKVLP 167
+ + ++FY WC C+ L P + +E P + +K V+ + +C +V+ P
Sbjct: 23 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYP 82
Query: 168 YFHFYRGA 175
+RG
Sbjct: 83 TLLLFRGG 90
>pdb|2F9S|A Chain A, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|2F9S|B Chain B, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
Length = 151
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 90 NAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFP 132
+APN + + + +E LS + V + F+GTWC C+ FP
Sbjct: 5 DAPNFVLEDTNGKRIE-LSDLKGKGVFLNFWGTWCEPCKKEFP 46
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 112 DRLVIVEFYGTWCASCRALFPKLCR-TAEEHPEIVFLK---VNFDENKPMCKSLNVKVLP 167
+ + ++FY WC C+ L P + +E P + +K V+ + +C +V+ P
Sbjct: 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYP 80
Query: 168 YFHFYRGA 175
+RG
Sbjct: 81 TLLLFRGG 88
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAE--EHPEIVFLKVNFDENKPMCKSLNVKVLPYFH 170
++EFY WC +C+ L P+ AE E E+ KV+ E + + LP +
Sbjct: 26 MIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIY 82
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 113 RLVIVEFYGTWCASCRALFPKLCRTAEEH-PEIVFLKVNFDENKPMCKSLNVKVLPYFHF 171
+ V+V FY C C+A P A+E+ VF ++N N + V+ P F F
Sbjct: 25 KPVVVXFYSPACPYCKAXEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKF 84
Query: 172 YRGAHG-----QLESFSCSLAKVMLRILIQ 196
+ HG Q+ S+ K +R +Q
Sbjct: 85 F--CHGRPVWEQVGQIYPSILKNAVRDXLQ 112
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 114 LVIVEFYGTWCASCRALFPKLCR-TAEEHPEIVFLK---VNFDENKPMCKSLNVKVLPYF 169
+ ++FY WC C+ L P + +E P + +K V+ + +C +V+ P
Sbjct: 18 ITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 77
Query: 170 HFYRGA 175
+RG
Sbjct: 78 LLFRGG 83
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 99 STQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTA----EEHP---EIVFLKVNF 151
T+ E L+ A + +V FY WC + L P + EE P ++VF +V+
Sbjct: 11 DTENIDEILNNAD--VALVNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFARVDC 68
Query: 152 DENKPMCKSLNVKVLPYFHFYRGA 175
D++ + + + P +R
Sbjct: 69 DQHSDIAQRYRISKYPTLKLFRNG 92
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 107 LSQAGDRLVIVEFYGTWCASCRALFPKLCR 136
LS ++VIV F+ TWC CR P R
Sbjct: 23 LSDLKGQVVIVNFWATWCPPCREEIPSXXR 52
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 110 AGDRLVIVEFYGTWCASCRALFPKLCRTA----EEHPEIVFLKVNFDENKPMCKSLNVKV 165
A V++EFY WC C+ P+ + A + P I K++ + +V
Sbjct: 32 ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSG 91
Query: 166 LPYFHFYRGAHGQLESFSCS 185
P + GQ + S
Sbjct: 92 YPTIKILK--KGQAVDYDGS 109
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNF 151
+VEFY WC C+ L P+ A E E KV
Sbjct: 29 MVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKL 64
>pdb|1LU4|A Chain A, 1.1 Angstrom Resolution Crystal Structure Of A Secreted
Mycobacterium Tuberculosis Disulfide Oxidoreductase
Homologous To E. Coli Dsbe: Implications For Functions
Length = 136
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 22/81 (27%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKV------------------NF----D 152
++ F+ WC C A P L + A +P + F+ + NF D
Sbjct: 27 AVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLND 86
Query: 153 ENKPMCKSLNVKVLPYFHFYR 173
+ + NV P F FYR
Sbjct: 87 ADGVIWARYNVPWQPAFVFYR 107
>pdb|4EO3|A Chain A, Peroxiredoxin Nitroreductase Fusion Enzyme
pdb|4EO3|B Chain B, Peroxiredoxin Nitroreductase Fusion Enzyme
Length = 322
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 60 RFSLTPRKRLISFKVHATLAETNQPKWWEKNAPNMIDIHSTQEFLEALSQAGD 112
RF + + L+ K+H L N +W KNAP +I +HS ++F AL D
Sbjct: 187 RFVVVDEEELLK-KIHEALPGGN---YWMKNAPALIAVHSKKDFDCALPDNRD 235
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 116 IVEFYGTWCASCRALFPKLCRTAEEHP-EIVFLKVNFDENKPMCKSLNVKVLPYFHFYRG 174
+V+F+ T C C+ + P L A ++ + LK++ DEN V +P ++
Sbjct: 23 LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 82
Query: 175 AH 176
Sbjct: 83 GQ 84
>pdb|1JFU|A Chain A, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
pdb|1JFU|B Chain B, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
Length = 186
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 107 LSQAGDRLVIVEFYGTWCASCRALFPKL--CRTAEEHPEIVFLKVNFDENKP-----MCK 159
LS + ++V + TWC CR P L + P + +N D P K
Sbjct: 55 LSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLK 114
Query: 160 SLNVKVLPYFH 170
N+ L YF+
Sbjct: 115 EANLTRLGYFN 125
>pdb|1A0R|P Chain P, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma
Length = 245
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 96 DIHSTQEFLEALSQAGD-RLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDEN 154
++ S ++FLE + + ++V Y C AL L A E+P + F K+ N
Sbjct: 116 ELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKAS-N 174
Query: 155 KPMCKSLNVKVLPYFHFYRGAH 176
+ VLP Y+G
Sbjct: 175 TGAGDRFSSDVLPTLLVYKGGE 196
>pdb|1O81|A Chain A, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1O81|B Chain B, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1OC9|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 106 ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD 152
AL + V F +WC CRA P+L + H E K NF+
Sbjct: 25 ALPSLAGKTVFFYFSASWCPPCRAFTPQLIDFYKAHAE----KKNFE 67
>pdb|2H19|A Chain A, Crystal Structure Of Resa Cys77ala Variant
pdb|2H19|B Chain B, Crystal Structure Of Resa Cys77ala Variant
Length = 143
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 90 NAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCR 136
+APN + + + +E LS + V + F+GTWC + FP +
Sbjct: 5 DAPNFVLEDTNGKRIE-LSDLKGKGVFLNFWGTWCEPAKKEFPYMAN 50
>pdb|2H1A|A Chain A, Resa C74a Variant
pdb|2H1A|B Chain B, Resa C74a Variant
Length = 143
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 90 NAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCR 136
+APN + + + +E LS + V + F+GTW C+ FP +
Sbjct: 5 DAPNFVLEDTNGKRIE-LSDLKGKGVFLNFWGTWAEPCKKEFPYMAN 50
>pdb|1O6J|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
pdb|1O6J|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
Length = 150
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 106 ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD 152
AL + V F +WC CRA P+L + H E K NF+
Sbjct: 23 ALPSLAGKTVFFYFSASWCPPCRAFTPQLIDFYKAHAE----KKNFE 65
>pdb|1FG4|A Chain A, Structure Of Tryparedoxin Ii
pdb|1FG4|B Chain B, Structure Of Tryparedoxin Ii
Length = 149
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 106 ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD 152
AL + V F +WC CRA P+L + H E K NF+
Sbjct: 22 ALPSLAGKTVFFYFSASWCPPCRAFTPQLIDFYKAHAE----KKNFE 64
>pdb|1OC9|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 106 ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPE 143
AL + V F +WC CRA P+L + H E
Sbjct: 25 ALPSLAGKTVFFYFSASWCPPCRAFTPQLIDFYKAHAE 62
>pdb|2TRC|P Chain P, PhosducinTRANSDUCIN BETA-Gamma Complex
Length = 217
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 94 MIDIHSTQEFLEALSQAGD-RLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFD 152
+ ++ + ++FLE + + ++V Y C AL L A E+P + F K+
Sbjct: 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPXVKFCKIRAS 160
Query: 153 ENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAK 188
N + VLP Y+G G+L S S+A+
Sbjct: 161 -NTGAGDRFSSDVLPTLLVYKG--GELISNFISVAE 193
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 112 DRLVIVEFYGTWCASCRALFPKL-CRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYF- 169
D ++V+F+ WC CR + P+ A ++ K++ + + ++ +P F
Sbjct: 64 DLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFI 123
Query: 170 HFYRG 174
F++G
Sbjct: 124 LFHKG 128
>pdb|3T58|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
Length = 519
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 117 VEFYGTWCASCRALFPKLCRTAEEHPE------IVFLKVNFDENKPMCKSLNVKVLPYFH 170
VEF+ +WC A P A + + + L + N +C+ N+ P
Sbjct: 35 VEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVR 94
Query: 171 FYR-----GAHGQLESFSCSLAKVMLRIL 194
F++ G+ L ++ + +R++
Sbjct: 95 FFQAFTKNGSGATLPGAGANVQTLRMRLI 123
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 107 LSQAGDRLVIVEFYGTWCASCRALFP 132
LS +V ++F+ +WC CR FP
Sbjct: 23 LSDKTGSVVYLDFWASWCGPCRQSFP 48
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 113 RLVIVEFYGTWCASCRALFPKLCRTAEEHP-----EIVFLKVNFDENK 155
+ V + F +WC CR P L E+H E+V +++DEN+
Sbjct: 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVL--ISWDENE 74
>pdb|1B9Y|C Chain C, Structural Analysis Of Phosducin And Its Phosphorylation-
Regulated Interaction With Transducin Beta-Gamma
Length = 246
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 96 DIHSTQEFLEALSQAGD-RLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDEN 154
++ + ++FLE + + ++V Y C AL L A E+P + F K+ N
Sbjct: 116 ELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRAS-N 174
Query: 155 KPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAK 188
+ VLP Y+G G+L S S+A+
Sbjct: 175 TGAGDRFSSDVLPTLLVYKG--GELISNFISVAE 206
>pdb|1B9X|C Chain C, Structural Analysis Of Phosducin And Its Phosphorylation-
Regulated Interaction With Transducin
Length = 246
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 96 DIHSTQEFLEALSQAGD-RLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDEN 154
++ + ++FLE + + ++V Y C AL L A E+P + F K+ N
Sbjct: 116 ELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRAS-N 174
Query: 155 KPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAK 188
+ VLP Y+G G+L S S+A+
Sbjct: 175 TGAGDRFSSDVLPTLLVYKG--GELISNFISVAE 206
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 95 IDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEE-HPEIVFLKVNFDE 153
ID+ + Q F E + Q G +V+FY WC C+ P+ A ++ KV+
Sbjct: 6 IDL-TPQTFNEKVLQ-GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA 63
Query: 154 NKPMCKSLNVKVLPYFHFYR 173
C+ +K P Y+
Sbjct: 64 YPQTCQKAGIKAYPSVKLYQ 83
>pdb|1OPO|A Chain A, The Structure Of Carnation Mottle Virus
pdb|1OPO|B Chain B, The Structure Of Carnation Mottle Virus
pdb|1OPO|C Chain C, The Structure Of Carnation Mottle Virus
Length = 348
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
Query: 81 TNQPKWWEKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCR--ALFPKLCRTA 138
TN P +N+P T E LS ++ + W S R A+FP+L
Sbjct: 65 TNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSFEDWVVSPRNVAVFPQLS--- 121
Query: 139 EEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHF 171
L NF NK +L VK P F
Sbjct: 122 -------LLATNF--NKYRITALTVKYSPACSF 145
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 112 DRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFL-KVNFDENKPMCKSLNVKVLPYFH 170
D + +V+FY W + L P+ R A ++ + V+ + C NV+ P
Sbjct: 563 DEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIR 622
Query: 171 FY 172
FY
Sbjct: 623 FY 624
>pdb|2K8V|A Chain A, Solution Structure Of Oxidised Erp18
Length = 157
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAE 139
++V + +WC +C+AL PK + E
Sbjct: 42 LMVIIHKSWCGACKALKPKFAESTE 66
>pdb|1OKD|A Chain A, Nmr-Structure Of Tryparedoxin 1
Length = 154
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 88 EKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFL 147
+K P + + +E S AG +LV F +WC CR P+L ++ E
Sbjct: 5 DKYLPGIEKLRRGDGEVEVKSLAG-KLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNF 63
Query: 148 KVNF 151
+V F
Sbjct: 64 EVVF 67
>pdb|1QK8|A Chain A, Tryparedoxin-I From Crithidia Fasciculata
pdb|1O7U|A Chain A, Radiation Induced Tryparedoxin-I
pdb|1O85|A Chain A, Radiation-Reduced Tryparedoxin-I
pdb|1O8W|A Chain A, Radiation-Reduced Tryparedoxin-I
Length = 146
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 88 EKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFL 147
+K P + + +E S AG +LV F +WC CR P+L ++ E
Sbjct: 5 DKYLPGIEKLRRGDGEVEVKSLAG-KLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNF 63
Query: 148 KVNF 151
+V F
Sbjct: 64 EVVF 67
>pdb|3LWA|A Chain A, The Crystal Structure Of A Secreted Thiol-Disulfide
Isomerase From Corynebacterium Glutamicum To 1.75a
Length = 183
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 107 LSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVL 166
LS +++VI+ +G WCA CR+ L EE L+ + + P L + V
Sbjct: 54 LSDFENQVVILNAWGQWCAPCRSESDDLQIIHEE------LQAAGNGDTPGGTVLGINVR 107
Query: 167 PY 168
Y
Sbjct: 108 DY 109
>pdb|1EWX|A Chain A, Crystal Structure Of Native Tryparedoxin I From Crithidia
Fasciculata
Length = 146
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 88 EKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKL 134
+K P + + +E S AG +LV F +WC CR P+L
Sbjct: 5 DKYLPGIEKLRRGDGEVEVKSLAG-KLVFFYFSASWCPPCRGFTPQL 50
>pdb|1SEN|A Chain A, Endoplasmic Reticulum Protein Rp19 O95881
Length = 164
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 115 VIVEFYGTWCASCRALFPKLCRTAE 139
++V + +WC +C+AL PK + E
Sbjct: 49 LMVIIHKSWCGACKALKPKFAESTE 73
>pdb|1EZK|A Chain A, Crystal Structure Of Recombinant Tryparedoxin I
Length = 153
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 88 EKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKL 134
+K P + + +E S AG +LV F +WC CR P+L
Sbjct: 4 DKYLPGIEKLRRGDGEVEVKSLAG-KLVFFYFSASWCPPCRGFTPQL 49
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange Protein,
Thioredoxin Family Protein From Chlorobium Tepidum Tls
Length = 165
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 113 RLVIVEFYGTWCASCRALFPKLCRTAEEHPE--IVFLKVNFDENKPMCKS 160
+ IV F+ TWC CR+ P + + F+ + +E P K+
Sbjct: 35 KAYIVNFFATWCPPCRSEIPDXVQVQKTWASRGFTFVGIAVNEQLPNVKN 84
>pdb|2LS5|A Chain A, Solution Structure Of A Putative Protein Disulfide
Isomerase From Bacteroides Thetaiotaomicron
Length = 159
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 106 ALSQAGDRLVIVEFYGTWCASCRALFPKLCRTA--EEHPEIVFLKVNFDENKPMCKSL 161
LS ++V+++F +WC CR P + + + F + D ++P+ K L
Sbjct: 27 TLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVL 84
>pdb|3S9F|A Chain A, The Structure Of Tryparedoxin I From Leishmania Major
Length = 165
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 113 RLVIVEFYGTWCASCRALFPKLCRTAEEH 141
+ V F +WC CR P+L E+H
Sbjct: 49 KTVFFYFSASWCPPCRGFTPQLVEFYEKH 77
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 123 WCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKV 165
W +C + L R +HP +VF +N D + C N V
Sbjct: 122 WDCACSDIL-YLSRWISQHPGLVFGYLNLDPDSARCSGTNTPV 163
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 123 WCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKV 165
W +C + L R +HP +VF +N D + C N V
Sbjct: 114 WDCACSDIL-YLSRWISQHPGLVFGYLNLDPDSARCSGTNTPV 155
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 103 FLEALSQAG--DRLVIVEFYGTWCASCRAL 130
F EAL +A D+L+ V+ + TWC C+ L
Sbjct: 16 FPEALKRAEVEDKLLFVDCFTTWCGPCKRL 45
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 123 WCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKV 165
W +C + L R +HP +VF +N D + C N V
Sbjct: 114 WDCACSDIL-YLSRWISQHPWLVFGYLNLDHDSARCSGTNTPV 155
>pdb|1VEO|A Chain A, Crystal Structure Analysis Of Y164fMALTOSE OF BACILLUS
Cereus Beta-Amylase At Ph 4.6
Length = 516
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 9/115 (7%)
Query: 86 WW---EKNAPNMIDIHSTQEFLEALSQAGDRLV-IVEFY---GTWCASCRALFPKLCRTA 138
WW EKN D Q F +++ AG +++ I+ + G C P
Sbjct: 51 WWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWVWNQ 110
Query: 139 EEHPEIVFLKVNFDENKPMCKSLNVKVL--PYFHFYRGAHGQLESFSCSLAKVML 191
+ + F NK L V+ Y Y ++ + +AK+ L
Sbjct: 111 KSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIFL 165
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 123 WCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKV 165
W +C + L R +HP +VF +N D + C N V
Sbjct: 217 WDCACSDIL-YLSRWISQHPGLVFGYLNLDPDSARCSGTNTPV 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.138 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,738,915
Number of Sequences: 62578
Number of extensions: 161089
Number of successful extensions: 655
Number of sequences better than 100.0: 182
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 185
length of query: 197
length of database: 14,973,337
effective HSP length: 94
effective length of query: 103
effective length of database: 9,091,005
effective search space: 936373515
effective search space used: 936373515
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)