BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029209
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster
GN=CG3714 PE=2 SV=2
Length = 555
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 117/196 (59%), Positives = 150/196 (76%), Gaps = 2/196 (1%)
Query: 1 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
++I ASND+NE+T+ +LN+QGH++D FGIGT+LVTC Q ALGCV+KLVEIN QPRIKLS
Sbjct: 361 LTIVASNDINEDTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYKLVEINGQPRIKLS 420
Query: 61 EDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQ 120
+DV KV++P K +YRLY +G+ L+D++ +EPPP VG+++LCRHPF ESKRAYV+P
Sbjct: 421 QDVEKVTMPGNKNAYRLYSADGHALIDLLQKVSEPPPAVGQKVLCRHPFQESKRAYVIPS 480
Query: 121 KVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLY 180
VE L K YW S K + LPTL+ RE+ L+ +R DH R LNPTPYKV+VS LY
Sbjct: 481 HVESLYKVYW--KSGKICQQLPTLEQVREKVQISLKTLRNDHKRTLNPTPYKVAVSDNLY 538
Query: 181 DFIHFLWLNEAPVGEL 196
+FIH LWL AP+GEL
Sbjct: 539 NFIHDLWLQNAPIGEL 554
>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans
GN=Y54G2A.17 PE=2 SV=3
Length = 562
Score = 225 bits (573), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 144/198 (72%), Gaps = 3/198 (1%)
Query: 1 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
MSI ASND+NEET+ +LN Q HE++AFG+GT+LVTC Q ALGCV+KLV + QP+IKLS
Sbjct: 367 MSIVASNDINEETIMSLNDQQHEINAFGVGTHLVTCQKQPALGCVYKLVAQSAQPKIKLS 426
Query: 61 EDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQ 120
+DV+K++IP KK+ YR++GK GY ++D+M E+EP P+ ++ILCRHPF ESKRA V
Sbjct: 427 QDVTKITIPGKKKCYRIFGKNGYAILDLMMLEDEPEPQPNQQILCRHPFEESKRALVNAN 486
Query: 121 KVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQ-MRPDHMRRLNPTPYKVSVSAKL 179
K+ +L YW + LPTL + +E + + +R DH R LNPTPYKVSVS +L
Sbjct: 487 KIIKLHNVYW--KDGEMITPLPTLNEIKEHVNESIRSTLRQDHRRYLNPTPYKVSVSERL 544
Query: 180 YDFIHFLWLNEAPVGELQ 197
Y F+H LWL AP+G+L+
Sbjct: 545 YQFLHTLWLQNAPIGQLE 562
>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum
GN=naprt PE=2 SV=1
Length = 589
Score = 220 bits (561), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 143/204 (70%), Gaps = 9/204 (4%)
Query: 1 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
SI ASNDLNE T+ ALN+QGHE+D F IGT LVTC AQ ALGCV+KLVEIN PRIKLS
Sbjct: 388 FSIVASNDLNEPTIIALNRQGHEIDVFAIGTNLVTCQAQPALGCVYKLVEINGSPRIKLS 447
Query: 61 EDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENE-------PPPKVGERILCRHPFNESK 113
++ +K+++P +K +YRL+G EG+PLVD++ +N+ P+VG+++LC HPF E K
Sbjct: 448 QEANKITLPGRKTAYRLFGSEGHPLVDLLVDDNDMIKDGSKQIPQVGKKVLCLHPFEEQK 507
Query: 114 RAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKV 173
R V P ++E+L + + LP L D RE C +Q+ ++R DH+R NPTPYKV
Sbjct: 508 RVIVTPVQIEKLHHIVF--EKGQLTMPLPALNDIREYCFQQISKVREDHLRNSNPTPYKV 565
Query: 174 SVSAKLYDFIHFLWLNEAPVGELQ 197
SV+ +L+D +H LWL+ P+ E++
Sbjct: 566 SVTKELFDTLHNLWLDSVPIKEMK 589
>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1
SV=2
Length = 538
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 3 ITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSED 62
I SN+++EE L L ++G EV+ GIGT +VTC Q +LG V+KLV + QPR+KL+ED
Sbjct: 352 IVVSNNIDEEALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTED 411
Query: 63 VSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKV 122
K ++P K ++RL G +G PL+D++ EP P+ G+ + P + V P +V
Sbjct: 412 PEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPP-GAQEPCTVRPAQV 470
Query: 123 EELLK-CYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYD 181
E LL+ C G + E LP+L ++R L ++ P+H R +P Y+V +S +L
Sbjct: 471 EPLLRLCLQQG---QLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQA 527
Query: 182 FIHFLWLNEAP 192
++ L ++P
Sbjct: 528 LVNSLCAGQSP 538
>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2
SV=1
Length = 538
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 3 ITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSED 62
I SN+++E L L ++G EV+ GIGT +VTC Q ++GCV+KLV + QPRIKL+ED
Sbjct: 352 IAVSNNIDESELMRLAQKGSEVNVIGIGTSVVTCPKQPSMGCVYKLVSVGGQPRIKLTED 411
Query: 63 VSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKV 122
K ++P K ++R G +G L+D++ EPPPK G+ + P + V P +V
Sbjct: 412 PEKQTLPGSKAAFRFLGPDGSLLLDLLQLAEEPPPKAGQELRV-WPRGTQEPCTVKPAQV 470
Query: 123 EELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDF 182
E LL+ Y + E LP+L ++R + L +RP H + +P Y V++S KL
Sbjct: 471 EPLLRLYL--QQGQLCEPLPSLDESRRFAQQSLSLLRPAHKQLQSPAVYPVALSEKLRAL 528
Query: 183 IHFL 186
+ L
Sbjct: 529 VDSL 532
>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2
SV=2
Length = 546
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 3 ITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSED 62
I +N ++E++L LNK+ +E+D G+GT+LVTC Q +LGCV+KLVE+ +PR+KLSED
Sbjct: 350 IVGTNSISEQSLSELNKKDNEIDVVGVGTHLVTCTRQPSLGCVYKLVEVRGRPRMKLSED 409
Query: 63 VSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPF-NESKRAYVVPQK 121
K ++P +K YRL +G+P +D++ +E P G + C N + + + P +
Sbjct: 410 PEKSTLPGRKAVYRLLDADGHPQMDVLCLCDEAAPAAGVELQCFSLLGNSTLQCSITPAQ 469
Query: 122 VEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYD 181
V L + S + L + ++RER L+ + P H R P Y V++S +L+
Sbjct: 470 VSSLRTQVF--SCGQITLPLNSASESRERAQISLQMLNPYHKRLQEPHNYTVALSERLHS 527
Query: 182 FI 183
+
Sbjct: 528 LV 529
>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1
PE=2 SV=1
Length = 538
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 5/185 (2%)
Query: 3 ITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSED 62
I SN+++E+ L L ++G EV+ GIGT +VTC Q ++GCV+KLV + QPRIKL+E+
Sbjct: 352 IAVSNNIDEKELARLAQKGSEVNVIGIGTNVVTCPKQPSMGCVYKLVSVGGQPRIKLTEE 411
Query: 63 VSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVV-PQK 121
K ++P K ++R EG L+D++ EPPPK G+ + R ++ V P +
Sbjct: 412 SQKETLPGSKAAFRFLVSEGSLLLDLLQLAEEPPPKAGQEL--RVWLQGAQEPCTVKPAQ 469
Query: 122 VEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYD 181
VE LL+ Y + E LP+L+++R + L ++RP H + NP Y+V++S KL
Sbjct: 470 VEPLLRLYL--QQGQPYEPLPSLEESRAFAQQSLSRLRPAHKQLQNPAVYQVALSEKLRA 527
Query: 182 FIHFL 186
+ L
Sbjct: 528 LVDSL 532
>sp|A5PK51|PNCB_BOVIN Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2
SV=2
Length = 538
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 3 ITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSED 62
I SN+++EE L L ++G EV+ GIGT +VTC Q +LGCV+KLV + QPR+KL+ED
Sbjct: 352 IAVSNNIDEEELARLAQKGSEVNVIGIGTSVVTCPRQPSLGCVYKLVSVGGQPRMKLTED 411
Query: 63 VSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKV 122
K ++P K ++RL G +G L+D++ EPPP+ G+ + P + V P V
Sbjct: 412 PEKQTLPGSKAAFRLLGSDGSLLLDVLQLAEEPPPQAGQELRV-WPRGARESRTVRPAHV 470
Query: 123 EELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDF 182
E LL+ + + E LP+L ++R + L ++ P H R P Y+V++S KL
Sbjct: 471 EPLLRLWV--QQGQLCEPLPSLAESRAFAQQSLHRLSPAHRRLEQPALYQVALSEKLQAL 528
Query: 183 I 183
+
Sbjct: 529 V 529
>sp|O32090|PNCB_BACSU Nicotinate phosphoribosyltransferase OS=Bacillus subtilis (strain
168) GN=pncB PE=3 SV=1
Length = 490
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 3 ITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPR----IK 58
+ AS+DL+E T+ L QG +D +G+GT L+T Y Q ALG V+KLV I + + IK
Sbjct: 290 VIASSDLDEHTIMNLKAQGARIDVWGVGTKLITAYDQPALGAVYKLVAIEEDGKMVDTIK 349
Query: 59 LSEDVSKVSIPCKKRSYRL 77
+S + KV+ P +K+ YR+
Sbjct: 350 ISSNPEKVTTPGRKKVYRI 368
>sp|O53770|PNCB2_MYCTU Nicotinate phosphoribosyltransferase pncB2 OS=Mycobacterium
tuberculosis GN=pncB2 PE=2 SV=1
Length = 463
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 1 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
+ I AS+ L+E + AL +D FG+GT LV AL +KLV + R K S
Sbjct: 283 VEIFASSGLDENRIAALLAARCPIDGFGVGTQLVVAQDAPALDMAYKLVAYDGSGRTKFS 342
Query: 61 EDVSKVSIPCKKRSYRLYGKEGYPLVDIMT--GENEPPPKVGERILCRHPFNESKRAYVV 118
KV P +K+ +R + G D + GEN P G+ +L P + R
Sbjct: 343 S--GKVIYPGRKQVFRKL-EHGVFCGDTLGEHGENLP----GDPLLV--PIMTNGR---- 389
Query: 119 PQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYK--VSVS 176
+ R+ PTL R+ +Q++ + P+ +R L T Y V+VS
Sbjct: 390 -----------------RIRQHAPTLDGARDWARQQIDALPPE-LRSLEDTGYSYPVAVS 431
Query: 177 AKL 179
++
Sbjct: 432 DRI 434
>sp|Q10641|PNCB1_MYCTU Nicotinate phosphoribosyltransferase pncB1 OS=Mycobacterium
tuberculosis GN=pncB1 PE=3 SV=2
Length = 448
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 3 ITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
I S DL+E ++ AL +G VD++G+GT LVT V+KLVE++ P K S
Sbjct: 299 IVVSGDLDEFSIAAL--RGEPVDSYGVGTSLVTGSGAPTANMVYKLVEVDGVPVQKRS 354
>sp|A9B9Y0|RSMA_PROM4 Ribosomal RNA small subunit methyltransferase A OS=Prochlorococcus
marinus (strain MIT 9211) GN=rsmA PE=3 SV=1
Length = 282
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Query: 65 KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYV-VPQKVE 123
+V + CK RS + D+ +P PKV +++ PF S+R V + ++VE
Sbjct: 164 RVQLLCKSRS----------VCDVSPKCFKPSPKVHSKVVVIEPFAFSERLNVDIEKRVE 213
Query: 124 ELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVS--VSAKLYD 181
LL+ + G K R L ++ R + QLE + LN P ++S + L
Sbjct: 214 SLLRTAFLGRRKKLRNTLASI-----RPLNQLESLADQLGISLNQRPQEISPMMWVSLAK 268
Query: 182 FIHFLWLNEAPVGELQ 197
IH + + VGE+Q
Sbjct: 269 RIHDM---DKLVGEIQ 281
>sp|Q0BH38|PNCB_BURCM Nicotinate phosphoribosyltransferase OS=Burkholderia ambifaria
(strain ATCC BAA-244 / AMMD) GN=pncB PE=3 SV=1
Length = 399
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C R+Y Y ++ + +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDRAYLAYLRQVFGI 389
Query: 86 V 86
Sbjct: 390 A 390
>sp|B1YVJ0|PNCB_BURA4 Nicotinate phosphoribosyltransferase OS=Burkholderia ambifaria
(strain MC40-6) GN=pncB PE=3 SV=1
Length = 399
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C R+Y Y ++ + +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDRAYLAYLRQVFGI 389
Query: 86 V 86
Sbjct: 390 A 390
>sp|Q6F6W1|PNCB_ACIAD Nicotinate phosphoribosyltransferase OS=Acinetobacter sp. (strain
ADP1) GN=pncB PE=3 SV=1
Length = 407
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 3 ITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
+T S+ LN E L++ +G +FGIGT L Q L V KLVE N Q K+S
Sbjct: 318 LTFSDGLNLEKAWELHQYFKGRFKVSFGIGTNLTNDMGQTPLNIVLKLVECNGQSVAKIS 377
Query: 61 E 61
+
Sbjct: 378 D 378
>sp|B4RL23|PNCB_NEIG2 Nicotinate phosphoribosyltransferase OS=Neisseria gonorrhoeae
(strain NCCP11945) GN=pncB PE=3 SV=1
Length = 402
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 3 ITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
+T S+ L+ E AL++ +G FGIGT L L V KLVE N Q KLS
Sbjct: 314 LTFSDGLDIERSWALHQYFKGRFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLS 373
Query: 61 EDVSKV 66
+ K
Sbjct: 374 DSPGKT 379
>sp|Q5F836|PNCB_NEIG1 Nicotinate phosphoribosyltransferase OS=Neisseria gonorrhoeae
(strain ATCC 700825 / FA 1090) GN=pncB PE=3 SV=2
Length = 402
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 3 ITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
+T S+ L+ E AL++ +G FGIGT L L V KLVE N Q KLS
Sbjct: 314 LTFSDGLDIERSWALHQYFKGRFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLS 373
Query: 61 EDVSKV 66
+ K
Sbjct: 374 DSPGKT 379
>sp|A6VH25|APGM_METM7 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
GN=apgM PE=3 SV=1
Length = 406
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 96 PPKVGERILCRHPFNESKRAYVVPQKVEELLKCYW------PGSSDKRREDLPTLKDTRE 149
P K G+R+ HP ++SK A + V LLK + P + ++R+++LP
Sbjct: 161 PKKEGKRVKEIHPLDDSKEAKKTAEIVNRLLKIAYEKLDKHPVNEERRKQNLPVANMIVP 220
Query: 150 RCIKQLEQMRP 160
R + Q+ ++ P
Sbjct: 221 RGVGQVPEIMP 231
>sp|A0K5S6|PNCB_BURCH Nicotinate phosphoribosyltransferase OS=Burkholderia cenocepacia
(strain HI2424) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ + +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVFGI 389
Query: 86 V 86
Sbjct: 390 A 390
>sp|Q1BXX4|PNCB_BURCA Nicotinate phosphoribosyltransferase OS=Burkholderia cenocepacia
(strain AU 1054) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ + +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVFGI 389
Query: 86 V 86
Sbjct: 390 A 390
>sp|B1JY80|PNCB_BURCC Nicotinate phosphoribosyltransferase OS=Burkholderia cenocepacia
(strain MC0-3) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ + +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVFGI 389
>sp|A4JCM8|PNCB_BURVG Nicotinate phosphoribosyltransferase OS=Burkholderia vietnamiensis
(strain G4 / LMG 22486) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ + +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVFGI 389
Query: 86 V 86
Sbjct: 390 A 390
>sp|Q63S63|PNCB_BURPS Nicotinate phosphoribosyltransferase OS=Burkholderia pseudomallei
(strain K96243) GN=pncB PE=3 SV=1
Length = 399
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYQPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVF-- 387
Query: 86 VDIMTGENEPP 96
G +PP
Sbjct: 388 -----GITQPP 393
>sp|Q62LW1|PNCB_BURMA Nicotinate phosphoribosyltransferase OS=Burkholderia mallei (strain
ATCC 23344) GN=pncB PE=3 SV=1
Length = 399
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYQPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVF-- 387
Query: 86 VDIMTGENEPP 96
G +PP
Sbjct: 388 -----GITQPP 393
>sp|A4G168|PNCB_HERAR Nicotinate phosphoribosyltransferase OS=Herminiimonas
arsenicoxydans GN=pncB PE=3 SV=1
Length = 397
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 83
FGIGT L AL V KL+ N QP KLS+ K C+ ++ Y ++ +
Sbjct: 336 GFGIGTNLSNDTGIPALNIVMKLMACNGQPVAKLSDSAGKT--LCRDETFLAYLRQVF 391
>sp|B2I1P1|PNCB_ACIBC Nicotinate phosphoribosyltransferase OS=Acinetobacter baumannii
(strain ACICU) GN=pncB PE=3 SV=1
Length = 404
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSE 61
+FGIGT L Q L V KLVE N Q K+S+
Sbjct: 340 SFGIGTNLTNDMGQTPLNIVLKLVECNGQSVAKISD 375
>sp|A3MA25|PNCB_ACIBT Nicotinate phosphoribosyltransferase OS=Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755) GN=pncB PE=3 SV=2
Length = 404
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSE 61
+FGIGT L Q L V KLVE N Q K+S+
Sbjct: 340 SFGIGTNLTNDMGQTPLNIVLKLVECNGQSVAKISD 375
>sp|Q7NSK2|PNCB_CHRVO Nicotinate phosphoribosyltransferase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=pncB PE=3 SV=1
Length = 402
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 3 ITASNDLNEETLDALNKQG--HEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 60
+T S+ L+ ++ L + H +FGIGT+ L V KLV N QP KLS
Sbjct: 316 LTFSDGLSVDSALQLQRHFSPHIQVSFGIGTHFTNDMGLEPLQIVLKLVSCNGQPVAKLS 375
Query: 61 EDVSKVSIPCKKRSYRLYGKEGY 83
+ K C ++ Y ++ +
Sbjct: 376 DSPGKTM--CSDETFLAYLRQVF 396
>sp|Q8PCP3|PNCB_XANCP Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=pncB PE=3 SV=1
Length = 398
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDLGYLRYLRDVFGL 386
>sp|Q4UQS8|PNCB_XANC8 Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=pncB PE=3 SV=1
Length = 398
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDLGYLRYLRDVFGL 386
>sp|B0RVE9|PNCB_XANCB Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=pncB PE=3 SV=1
Length = 398
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDLGYLRYLRDVFGL 386
>sp|Q0K8J9|PNCB_CUPNH Nicotinate phosphoribosyltransferase OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pncB PE=3
SV=1
Length = 392
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 83
AFG+GT L L V K+V N QP KLS+ K C Y Y ++ Y
Sbjct: 331 AFGVGTNLTNDLGYTPLQIVIKMVRCNGQPVAKLSDTPEKTM--CDDPGYLSYLRQVY 386
>sp|Q3BPD5|PNCB_XANC5 Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=pncB PE=3 SV=1
Length = 392
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDIGYLRYLRDVFGL 386
>sp|Q8Y0L2|PNCB_RALSO Nicotinate phosphoribosyltransferase OS=Ralstonia solanacearum
(strain GMI1000) GN=pncB PE=3 SV=2
Length = 389
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 83
AFG+GT L L V K+V N QP KLS+ K C +Y Y K+ +
Sbjct: 331 AFGVGTNLTNDLGYTPLQIVIKMVRCNGQPVAKLSDAPEKTM--CDDPAYLAYLKQVF 386
>sp|Q8PGU5|PNCB_XANAC Nicotinate phosphoribosyltransferase OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=pncB PE=3 SV=1
Length = 392
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDIGYLRYLRDVFGL 386
>sp|B2U8V2|PNCB_RALPJ Nicotinate phosphoribosyltransferase OS=Ralstonia pickettii (strain
12J) GN=pncB PE=3 SV=1
Length = 389
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 83
AFG+GT L L V K+V N QP KLS+ K C +Y Y K+ +
Sbjct: 331 AFGVGTNLTNDLGYTPLQIVIKIVRCNGQPVAKLSDAPEKTM--CDDPAYLTYLKQVF 386
>sp|Q128P8|PNCB_POLSJ Nicotinate phosphoribosyltransferase OS=Polaromonas sp. (strain
JS666 / ATCC BAA-500) GN=pncB PE=3 SV=1
Length = 395
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
AFGIGT L L V K++ N QP KLS+ SK C+ Y Y ++ + +
Sbjct: 337 AFGIGTNLTNDLGYEPLQIVIKMIRCNGQPVAKLSDTPSKNM--CEDEKYLAYLRQVFEI 394
>sp|Q9JTM8|PNCB_NEIMA Nicotinate phosphoribosyltransferase OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=pncB PE=3
SV=2
Length = 402
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 19/41 (46%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 66
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 339 GFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|Q9JYM9|PNCB_NEIMB Nicotinate phosphoribosyltransferase OS=Neisseria meningitidis
serogroup B (strain MC58) GN=pncB PE=3 SV=1
Length = 402
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 19/41 (46%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 66
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 339 GFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|A9M0T9|PNCB_NEIM0 Nicotinate phosphoribosyltransferase OS=Neisseria meningitidis
serogroup C (strain 053442) GN=pncB PE=3 SV=1
Length = 402
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 19/41 (46%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 66
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 339 GFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|A4FW85|APGM_METM5 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
GN=apgM PE=3 SV=1
Length = 406
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 96 PPKVGERILCRHPFNESKRAYVVPQKVEELLKCYW------PGSSDKRREDLPTLKDTRE 149
P K G+R+ HP + SK A + V +LLK + P + ++R+++LP
Sbjct: 161 PKKEGKRVKEIHPLDNSKEAKKTAEIVNKLLKIAYEKLDKHPVNEERRKQNLPVANMIVP 220
Query: 150 RCIKQLEQM 158
R + Q+ ++
Sbjct: 221 RGVGQVPEI 229
>sp|C6DFB8|PNCB_PECCP Nicotinate phosphoribosyltransferase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=pncB PE=3 SV=1
Length = 401
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 2 SITASNDLNEETLDALNKQ-GHEVD-AFGIGTYLVTCYAQAA--LGCVFKLVEINKQPRI 57
++ S++LN + AL + G V+ FGIGT L TC L V KLVE N +P
Sbjct: 310 TLVFSDNLNLDKALALYRHFGQRVNLVFGIGTRL-TCDIPGVKPLNIVIKLVECNGKPVA 368
Query: 58 KLSEDVSKVSIPCKKRSY 75
KLS+ K C+ +++
Sbjct: 369 KLSDSPGKTI--CQDQNF 384
>sp|A9IIC5|PNCB_BORPD Nicotinate phosphoribosyltransferase OS=Bordetella petrii (strain
ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=pncB PE=3 SV=1
Length = 391
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
+FGIGT L L V K+V N QP K+S+ K C +Y Y ++ + L
Sbjct: 331 SFGIGTNLTNDLGHEPLQIVMKMVRCNGQPVAKVSDAPEKTM--CDDPAYLAYLRQVFQL 388
>sp|Q7VTF7|PNCB_BORPE Nicotinate phosphoribosyltransferase OS=Bordetella pertussis
(strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=pncB
PE=3 SV=1
Length = 405
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
+FGIGT L L V K+V N QP K+S+ K C +Y Y ++ + L
Sbjct: 345 SFGIGTNLTNDLGHEPLQIVMKMVRCNGQPVAKVSDAPEKTM--CDDPAYLAYLRQVFQL 402
>sp|Q7WCZ8|PNCB_BORBR Nicotinate phosphoribosyltransferase OS=Bordetella bronchiseptica
(strain ATCC BAA-588 / NCTC 13252 / RB50) GN=pncB PE=3
SV=1
Length = 405
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
+FGIGT L L V K+V N QP K+S+ K C +Y Y ++ + L
Sbjct: 345 SFGIGTNLTNDLGHEPLQIVMKMVRCNGQPVAKVSDAPEKTM--CDDPAYLAYLRQVFQL 402
>sp|Q7W5G3|PNCB_BORPA Nicotinate phosphoribosyltransferase OS=Bordetella parapertussis
(strain 12822 / ATCC BAA-587 / NCTC 13253) GN=pncB PE=3
SV=1
Length = 405
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 85
+FGIGT L L V K+V N QP K+S+ K C +Y Y ++ + L
Sbjct: 345 SFGIGTNLTNDLGHEPLQIVMKMVRCNGQPVAKVSDAPEKTM--CDDPAYLAYLRQVFQL 402
>sp|Q32E52|PNCB_SHIDS Nicotinate phosphoribosyltransferase OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=pncB PE=3 SV=1
Length = 400
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 26 AFGIGTYLVTCYAQAA-LGCVFKLVEINKQPRIKLSEDVSKV 66
+FGIGT L Q L V KLVE N +P KLS+ SK
Sbjct: 335 SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPSKT 376
>sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5
OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2
Length = 1739
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 131 PGSSDKRREDLPTLKDTRERCIKQL------EQMRPDHMRRLNPTPYKVSVSAKLYDFIH 184
P D R E+ P L R +CI QL ++ + L TP K+++ L+ FI
Sbjct: 1521 PTEPDSREEESPALGAIRGKCITQLLLLGAINSIQQKYWSNLK-TPQKIAIMDILFSFIE 1579
Query: 185 F 185
F
Sbjct: 1580 F 1580
>sp|Q6LXB3|APGM_METMP 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Methanococcus maripaludis (strain S2 / LL) GN=apgM
PE=3 SV=1
Length = 406
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 96 PPKVGERILCRHPFNESKRAYVVPQKVEELLKCYW------PGSSDKRREDLPTLKDTRE 149
P K G+++ HP ++SK A + V +LLK + P + ++R+++LP
Sbjct: 161 PKKEGKKVKEIHPLDDSKEAKKTAEIVNKLLKIAYEKLDKHPVNEERRKQNLPVANMIVP 220
Query: 150 RCIKQLEQM 158
R + Q+ ++
Sbjct: 221 RGVGQVPEI 229
>sp|Q87EC4|PNCB_XYLFT Nicotinate phosphoribosyltransferase OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=pncB PE=3 SV=1
Length = 394
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 26 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSK 65
AFG+GT L L V K+V N QP KLS+ K
Sbjct: 333 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGK 372
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,887,409
Number of Sequences: 539616
Number of extensions: 3194883
Number of successful extensions: 6476
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6422
Number of HSP's gapped (non-prelim): 58
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)