Query 029211
Match_columns 197
No_of_seqs 134 out of 850
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 09:17:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029211.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029211hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 2.9E-34 6.4E-39 224.8 18.4 175 1-184 1-177 (178)
2 PLN02314 pectinesterase 100.0 2.3E-33 5E-38 253.3 19.1 161 27-188 69-237 (586)
3 smart00856 PMEI Plant invertas 100.0 8.1E-33 1.7E-37 210.2 16.8 147 26-180 2-148 (148)
4 PLN02468 putative pectinestera 100.0 1.1E-32 2.4E-37 247.8 18.7 155 28-187 64-219 (565)
5 PLN02217 probable pectinestera 100.0 9E-33 2E-37 250.6 18.0 158 28-187 53-210 (670)
6 PLN02484 probable pectinestera 100.0 1.1E-32 2.5E-37 248.4 18.1 156 27-186 72-228 (587)
7 PLN02313 Pectinesterase/pectin 100.0 2.9E-32 6.2E-37 246.0 19.1 160 27-186 58-221 (587)
8 PLN02995 Probable pectinestera 100.0 3.1E-32 6.8E-37 243.5 18.4 180 7-189 13-195 (539)
9 PLN02990 Probable pectinestera 100.0 5.2E-32 1.1E-36 243.5 18.2 157 28-186 53-211 (572)
10 PLN02708 Probable pectinestera 100.0 1.1E-31 2.3E-36 240.9 19.4 158 26-191 42-202 (553)
11 PLN02713 Probable pectinestera 100.0 7.8E-32 1.7E-36 242.1 17.5 155 26-183 30-188 (566)
12 PLN02416 probable pectinestera 100.0 1.1E-31 2.3E-36 240.2 17.7 175 8-186 11-193 (541)
13 PLN02506 putative pectinestera 100.0 3.1E-31 6.6E-36 236.9 18.6 181 5-186 5-193 (537)
14 PLN02197 pectinesterase 100.0 9.8E-31 2.1E-35 235.3 18.0 153 28-186 38-192 (588)
15 PLN02745 Putative pectinestera 100.0 1.5E-30 3.4E-35 234.8 17.6 153 29-187 80-234 (596)
16 PLN02301 pectinesterase/pectin 100.0 2.2E-30 4.7E-35 231.7 17.8 158 24-189 46-205 (548)
17 PF04043 PMEI: Plant invertase 100.0 3.6E-30 7.9E-35 196.0 14.5 147 27-180 3-152 (152)
18 PLN02698 Probable pectinestera 100.0 6.9E-30 1.5E-34 226.8 15.8 164 15-186 8-178 (497)
19 PLN03043 Probable pectinestera 100.0 2.8E-29 6E-34 224.8 16.2 150 32-183 3-156 (538)
20 PLN02201 probable pectinestera 99.9 1.2E-23 2.5E-28 187.4 15.1 126 59-185 37-164 (520)
21 PLN02933 Probable pectinestera 99.9 1.4E-22 3.1E-27 180.4 17.4 125 57-186 49-183 (530)
22 PLN02488 probable pectinestera 99.9 1.9E-22 4.2E-27 177.8 14.1 151 32-185 2-160 (509)
23 PLN02170 probable pectinestera 99.9 3.1E-21 6.8E-26 171.5 13.9 130 39-189 58-189 (529)
24 PLN02916 pectinesterase family 99.7 6.7E-17 1.5E-21 143.3 9.2 89 89-188 56-144 (502)
25 PF07870 DUF1657: Protein of u 71.8 20 0.00044 21.9 6.5 45 68-113 3-47 (50)
26 KOG1733 Mitochondrial import i 67.9 38 0.00083 23.6 7.4 60 58-117 17-85 (97)
27 PF08287 DASH_Spc19: Spc19; I 59.6 37 0.00081 25.9 6.0 25 98-122 2-26 (153)
28 PF02953 zf-Tim10_DDP: Tim10/D 52.4 37 0.0008 21.6 4.3 29 89-117 36-64 (66)
29 PF14290 DUF4370: Domain of un 51.8 1.3E+02 0.0027 24.3 8.2 60 95-155 130-189 (239)
30 PLN02749 Uncharacterized prote 42.6 1.5E+02 0.0033 22.7 6.7 61 94-155 63-123 (173)
31 COG2205 KdpD Osmosensitive K+ 38.9 1.8E+02 0.0039 28.5 8.1 104 91-194 620-735 (890)
32 KOG4841 Dolichol-phosphate man 38.0 33 0.00072 23.6 2.4 27 96-122 65-91 (95)
33 PF04108 APG17: Autophagy prot 37.5 2.8E+02 0.0061 24.6 8.9 13 37-49 215-227 (412)
34 PF05984 Cytomega_UL20A: Cytom 32.1 50 0.0011 22.6 2.5 20 1-20 1-20 (100)
35 PF07172 GRP: Glycine rich pro 31.2 46 0.00099 23.3 2.3 12 1-12 1-12 (95)
36 PF08285 DPM3: Dolichol-phosph 30.2 44 0.00095 23.2 2.1 26 97-122 62-87 (91)
37 PF03487 IL13: Interleukin-13; 28.9 67 0.0015 18.8 2.3 18 136-155 3-20 (43)
38 PF15240 Pro-rich: Proline-ric 28.5 32 0.0007 27.0 1.3 13 6-18 1-13 (179)
39 PF11895 DUF3415: Domain of un 25.7 21 0.00046 24.2 -0.2 23 27-54 48-70 (80)
40 PF01093 Clusterin: Clusterin; 25.2 4.4E+02 0.0095 23.8 7.9 64 91-154 39-107 (436)
41 PF10792 DUF2605: Protein of u 20.5 2.6E+02 0.0056 19.8 4.4 54 131-186 16-69 (98)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=2.9e-34 Score=224.83 Aligned_cols=175 Identities=30% Similarity=0.443 Sum_probs=151.0
Q ss_pred CCchhHHHHHHHHHHHHhhcCCC--CCchhHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHH
Q 029211 1 MAGPNMFMLFMLLAWLAKSGESA--SGNRNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVT 78 (197)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~ 78 (197)
|++++.++++++|..++..+ .+ .......|+.+|++|+||++|+.+|.++|++...|+.+++.++++.+..+++.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~ 79 (178)
T TIGR01614 1 MASSLSLLLFLLLLSLVATS-SSNSLNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTL 79 (178)
T ss_pred CchhHHHHHHHHHHcccccc-cccCCcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 78877666555553333222 11 2356789999999999999999999999988778999999999999999999999
Q ss_pred HHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcch
Q 029211 79 QFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKAT 158 (197)
Q Consensus 79 ~~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~ 158 (197)
.++.++.++ ..++..+.++++|.++|++++++|+++++.+.. +.++|+++|||+|+++++||+|||.+.+++
T Consensus 80 ~~i~~l~~~-~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~-------~~~~d~~~~ls~a~~~~~tC~d~f~~~~~~ 151 (178)
T TIGR01614 80 DHISKLLLT-KGDPRDKSALEDCVELYSDAVDALDKALASLKS-------KDYSDAETWLSSALTDPSTCEDGFEELGGI 151 (178)
T ss_pred HHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cchhHHHHHHHHHHcccchHHHHhccCCCC
Confidence 999998765 347889999999999999999999999999986 357999999999999999999999987655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 029211 159 QVDLLKKRVLKTTYLASNALALINKL 184 (197)
Q Consensus 159 ~~~~l~~~~~~~~~l~snaLaii~~~ 184 (197)
.++++...++++.+|++|+|+|++++
T Consensus 152 ~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 152 VKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 67899999999999999999999865
No 2
>PLN02314 pectinesterase
Probab=100.00 E-value=2.3e-33 Score=253.31 Aligned_cols=161 Identities=26% Similarity=0.431 Sum_probs=141.6
Q ss_pred hhHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHH
Q 029211 27 RNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQ 106 (197)
Q Consensus 27 ~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely~ 106 (197)
....|+.+|++|+||++|+++|+++|.+...+|++|++++++++++++..+...++++... ..++..+.||+||.|+|+
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-~~~~~~k~AL~DC~Elld 147 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-TNDERLKSALRVCETLFD 147 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999987778999999999999999999999999988653 578899999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhh--hhhhhhhHHHHHHhhhcCcchHhhcccCC------cchHHHHHHHHHHHHHHHHHHHH
Q 029211 107 ETIDELHMSLGILRRLSARE--FDRQMDDLTTFVSAALTYEDTCLDGFEGQ------KATQVDLLKKRVLKTTYLASNAL 178 (197)
Q Consensus 107 ~a~~~L~~a~~~l~~~~~~~--~~~~~~d~~twLSaalt~~~TC~dgf~~~------~~~~~~~l~~~~~~~~~l~snaL 178 (197)
+++++|++++.+|...+... ..+.++|++||||||||||+||+|||++. +++++..|...+.++.+|+||+|
T Consensus 148 dAid~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNaL 227 (586)
T PLN02314 148 DAIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNSL 227 (586)
T ss_pred HHHHHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997543221 24567999999999999999999999865 34678889999999999999999
Q ss_pred HHHHhhhhcC
Q 029211 179 ALINKLATTS 188 (197)
Q Consensus 179 aii~~~~~~g 188 (197)
||++.+....
T Consensus 228 AIi~~l~~~~ 237 (586)
T PLN02314 228 AIVSKILGIL 237 (586)
T ss_pred HHHhhhcccc
Confidence 9999876643
No 3
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=8.1e-33 Score=210.17 Aligned_cols=147 Identities=33% Similarity=0.536 Sum_probs=136.1
Q ss_pred chhHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHH
Q 029211 26 NRNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECF 105 (197)
Q Consensus 26 ~~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely 105 (197)
...+.|+.+|++|+||++|+++|.++|.+...|+.+|++++|+.+++++..+..+++++.+ .+.++..+.+|++|.++|
T Consensus 2 ~~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~-~~~~~~~~~al~~C~~~y 80 (148)
T smart00856 2 PTSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLK-KTKDPRLKAALKDCLELY 80 (148)
T ss_pred CHHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999998878899999999999999999999999999876 367899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 029211 106 QETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALAL 180 (197)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLai 180 (197)
++++++|++++.++..+ .++|+++|||+|++|++||+|||.+.++.++++|...+.++.+|++|+|+|
T Consensus 81 ~~a~~~L~~a~~~l~~~-------~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 81 DDAVDSLEKALEELKSG-------DYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHHhc-------chhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999863 579999999999999999999999865667899999999999999999986
No 4
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-32 Score=247.83 Aligned_cols=155 Identities=30% Similarity=0.432 Sum_probs=136.7
Q ss_pred hHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCChhhHHHHHHHHHHHH
Q 029211 28 NNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRN-LMRGRNRLALLDCIECFQ 106 (197)
Q Consensus 28 ~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~-~~~~~~~~al~dC~ely~ 106 (197)
...|+.+|++|+||++|+++|+++|.+...+|++|++++++++++++..+...+.++.... ..++..+.||+||.|+|+
T Consensus 64 ~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELld 143 (565)
T PLN02468 64 STSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELLD 143 (565)
T ss_pred hHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHH
Confidence 4589999999999999999999999876789999999999999999999998887775432 457899999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029211 107 ETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINKLAT 186 (197)
Q Consensus 107 ~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~~~~ 186 (197)
+++++|++++.++..... .+.++|++||||||||||+||+|||++. +++++|...+.++.+|+||+|||++.+..
T Consensus 144 daid~L~~Sl~~l~~~~~---~~~~dDl~TWLSAAlTnq~TClDGF~e~--~vk~~~~~~l~n~~eLtSNaLAIi~~l~~ 218 (565)
T PLN02468 144 LAIDNLNNSLTSSGGVSV---LDNVDDLRTWLSSAGTYQETCIDGLAEP--NLKSFGENHLKNSTELTSNSLAIITWIGK 218 (565)
T ss_pred HHHHHHHHHHHHHhcccc---ccchHHHHHHHHHHhcchhhhhhhhccc--CchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999999999999874321 3567999999999999999999999874 47888999999999999999999998655
Q ss_pred c
Q 029211 187 T 187 (197)
Q Consensus 187 ~ 187 (197)
.
T Consensus 219 ~ 219 (565)
T PLN02468 219 I 219 (565)
T ss_pred c
Confidence 4
No 5
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=9e-33 Score=250.59 Aligned_cols=158 Identities=23% Similarity=0.428 Sum_probs=138.1
Q ss_pred hHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHH
Q 029211 28 NNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQE 107 (197)
Q Consensus 28 ~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely~~ 107 (197)
.+.|+.+|+.|+||++|+++|++++ ....+|++|++++++++++++..+...++++... ..+++++.|++||.|+|++
T Consensus 53 ~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~-~~~~r~k~AL~DClELldd 130 (670)
T PLN02217 53 VKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIEL-QKDPRTKMALDQCKELMDY 130 (670)
T ss_pred HHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCChHHHHHHHHHHHHHHH
Confidence 4489999999999999999999987 4456999999999999999999999988887432 4678899999999999999
Q ss_pred HHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 029211 108 TIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINKLATT 187 (197)
Q Consensus 108 a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~~~~~ 187 (197)
++++|++++.+|...+...+....+|++||||||||||+||.|||++.++.++..|...+.++.+|+||+|||++.+...
T Consensus 131 AvDeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~lss~ 210 (670)
T PLN02217 131 AIGELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSEMSNY 210 (670)
T ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999985433333445799999999999999999999987656788889999999999999999999986653
No 6
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-32 Score=248.40 Aligned_cols=156 Identities=26% Similarity=0.389 Sum_probs=137.3
Q ss_pred hhHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHH
Q 029211 27 RNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQ 106 (197)
Q Consensus 27 ~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely~ 106 (197)
....|+.+|++|+||++|+++|+++|.+...+|++|++++++++++++.++......+.. .+.+++.+.||+||.|+|+
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-~~~~~r~k~AL~DClELld 150 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-VQMPPRVRSAYDSCLELLD 150 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Confidence 345899999999999999999999998777899999999999999999988776655543 4578899999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCc-chHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 029211 107 ETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQK-ATQVDLLKKRVLKTTYLASNALALINKLA 185 (197)
Q Consensus 107 ~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~-~~~~~~l~~~~~~~~~l~snaLaii~~~~ 185 (197)
+++++|++++.+|..... ...++|++||||||||||+||+|||++.+ ++++++|...+.++.+|+||+|||++.+.
T Consensus 151 dAid~L~~Sl~~l~~~~~---~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~~ 227 (587)
T PLN02484 151 DSVDALSRALSSVVPSSG---GGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSASN 227 (587)
T ss_pred HHHHHHHHHHHHHhcccc---ccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999985321 34579999999999999999999998763 56889999999999999999999999876
Q ss_pred h
Q 029211 186 T 186 (197)
Q Consensus 186 ~ 186 (197)
.
T Consensus 228 ~ 228 (587)
T PLN02484 228 G 228 (587)
T ss_pred c
Confidence 4
No 7
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.9e-32 Score=246.04 Aligned_cols=160 Identities=30% Similarity=0.465 Sum_probs=139.5
Q ss_pred hhHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCChhhHHHHHHHHHHH
Q 029211 27 RNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRN-LMRGRNRLALLDCIECF 105 (197)
Q Consensus 27 ~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~-~~~~~~~~al~dC~ely 105 (197)
....|+.+|++|+||++|+++|++.|.+...+|.+|++++|+++++++..+...++++.+.. +.+++++.||+||.|+|
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl 137 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI 137 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 34689999999999999999999988766679999999999999999999999999886532 46788999999999999
Q ss_pred HHHHHHHHHHHHHHhhcch-hhhhhhhhhHHHHHHhhhcCcchHhhcccCCc--chHHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 106 QETIDELHMSLGILRRLSA-REFDRQMDDLTTFVSAALTYEDTCLDGFEGQK--ATQVDLLKKRVLKTTYLASNALALIN 182 (197)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~-~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~--~~~~~~l~~~~~~~~~l~snaLaii~ 182 (197)
++++++|++++..+..... ..+.+.++|++||||||||||+||+|||++.+ +.+++.|...+.++.+|+||+|||++
T Consensus 138 ddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv~ 217 (587)
T PLN02313 138 DETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIK 217 (587)
T ss_pred HHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999985432 22345679999999999999999999997533 46788899999999999999999999
Q ss_pred hhhh
Q 029211 183 KLAT 186 (197)
Q Consensus 183 ~~~~ 186 (197)
.+..
T Consensus 218 ~~~~ 221 (587)
T PLN02313 218 NMTE 221 (587)
T ss_pred cccc
Confidence 8664
No 8
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.1e-32 Score=243.52 Aligned_cols=180 Identities=21% Similarity=0.236 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHhcCCCCCChhhHHhhhccCcccCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 7 FMLFMLLAWLAKSGESASGNRNNFVRDACSVTTYRDLCIHSLAPFSKSAR-NSPGKWARAGVSVTIGEVKNVTQFLYKLK 85 (197)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~-~d~~~l~~~~i~~a~~~a~~~~~~~~~l~ 85 (197)
+-|||+|.+++++++..++++...|+.+|+.|+||++|+++|.++|.+.. .++.+++++++++++.++.++...+.++.
T Consensus 13 ~~~ll~~~~~~~~~~~~~~~~~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~ 92 (539)
T PLN02995 13 LHLLLLLLLCVHPLTTVADGNSTDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSG 92 (539)
T ss_pred HHHHHHHHHHhhhcccCCCChhHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33555555555444333333344899999999999999999999887533 48999999999999999999999998885
Q ss_pred hccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHH
Q 029211 86 RRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKK 165 (197)
Q Consensus 86 ~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~ 165 (197)
+. ..+++.+.|++||.|+|++++++|++++.+++..........++|++|||||||||++||+|||++.+ ++..+..
T Consensus 93 ~~-~~~~r~~~AL~DC~ELl~DAvD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~--~~~~v~~ 169 (539)
T PLN02995 93 KN-CTDFKKQAVLADCIDLYGDTIMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLN--VSDFITP 169 (539)
T ss_pred hc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhcccc--chhhhhh
Confidence 42 46788999999999999999999999999998543211123467999999999999999999998754 2333444
Q ss_pred HH--HHHHHHHHHHHHHHHhhhhcCc
Q 029211 166 RV--LKTTYLASNALALINKLATTSL 189 (197)
Q Consensus 166 ~~--~~~~~l~snaLaii~~~~~~g~ 189 (197)
.+ .++.+|+||+|||++.+...+.
T Consensus 170 ~v~~~~~~~ltSNaLAi~~~l~~~~~ 195 (539)
T PLN02995 170 IVSNTKISHLISNCLAVNGALLTAGN 195 (539)
T ss_pred hhhhhhHHHHHHHHHHHhhhhccccc
Confidence 44 6799999999999998766543
No 9
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.2e-32 Score=243.51 Aligned_cols=157 Identities=23% Similarity=0.383 Sum_probs=137.3
Q ss_pred hHHHHhcCCCCCChhhHHhhhcc-CcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCChhhHHHHHHHHHHH
Q 029211 28 NNFVRDACSVTTYRDLCIHSLAP-FSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRR-NLMRGRNRLALLDCIECF 105 (197)
Q Consensus 28 ~~~v~~~C~~T~~p~~C~~sL~~-~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~-~~~~~~~~~al~dC~ely 105 (197)
...|+.+|+.|+||++|+++|++ .|. ..+|++|++++++++++++..+...+.++... .+.+++++.|++||.|+|
T Consensus 53 ~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~ELl 130 (572)
T PLN02990 53 TKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKLM 130 (572)
T ss_pred hHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999988 443 46899999999999999999999888776532 257899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 029211 106 QETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINKLA 185 (197)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~~~ 185 (197)
++++++|++++.+|...+...+...++|++||||||||||+||+|||++.++++++.|...+.++.+|+||+|||++.+.
T Consensus 131 ddAvdeL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~~~~ 210 (572)
T PLN02990 131 NDATDDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITNIS 210 (572)
T ss_pred HHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999854433334557999999999999999999999876667888999999999999999999999876
Q ss_pred h
Q 029211 186 T 186 (197)
Q Consensus 186 ~ 186 (197)
.
T Consensus 211 ~ 211 (572)
T PLN02990 211 N 211 (572)
T ss_pred c
Confidence 5
No 10
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-31 Score=240.93 Aligned_cols=158 Identities=18% Similarity=0.272 Sum_probs=133.1
Q ss_pred chhHHHHhcCCCCCChhhHHhhhccCcc-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHH
Q 029211 26 NRNNFVRDACSVTTYRDLCIHSLAPFSK-SARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIEC 104 (197)
Q Consensus 26 ~~~~~v~~~C~~T~~p~~C~~sL~~~p~-s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~el 104 (197)
..+..|+..|+.|+||++|+++|++++. ....+|.++++++|+++++++..+...++++.+....+.....|++||.|+
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~EL 121 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLEV 121 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence 4467899999999999999999999884 345689999999999999999999999998875432233345899999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCc--chHHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 105 FQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQK--ATQVDLLKKRVLKTTYLASNALALIN 182 (197)
Q Consensus 105 y~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~--~~~~~~l~~~~~~~~~l~snaLaii~ 182 (197)
|++++++|++++.++.. ..++|++||||||||||+||.|||.+.+ +.++..+ ..+.++.+|+||+|||++
T Consensus 122 lddavd~L~~Sl~~L~~-------~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLAmv~ 193 (553)
T PLN02708 122 LSNSEHRISSTDIALPR-------GKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALSMMA 193 (553)
T ss_pred HHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHHhhh
Confidence 99999999999988874 3579999999999999999999998653 3455555 688999999999999999
Q ss_pred hhhhcCccc
Q 029211 183 KLATTSLES 191 (197)
Q Consensus 183 ~~~~~g~~~ 191 (197)
.+...+.++
T Consensus 194 ~~~~~~~~~ 202 (553)
T PLN02708 194 SYDIFGDDT 202 (553)
T ss_pred ccccccccc
Confidence 876555544
No 11
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=7.8e-32 Score=242.14 Aligned_cols=155 Identities=25% Similarity=0.269 Sum_probs=134.4
Q ss_pred chhHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CChhhHHHHHHHHH
Q 029211 26 NRNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNL--MRGRNRLALLDCIE 103 (197)
Q Consensus 26 ~~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~--~~~~~~~al~dC~e 103 (197)
.....++.+|++|+||++|+++|++. ...++.++++++|+++++++..+...++++.+..+ .+++++.||+||.|
T Consensus 30 ~~~~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC~E 106 (566)
T PLN02713 30 STPVSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQF 106 (566)
T ss_pred CCCCCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHH
Confidence 44567899999999999999999763 23589999999999999999999999998875432 37889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCc--chHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 104 CFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQK--ATQVDLLKKRVLKTTYLASNALALI 181 (197)
Q Consensus 104 ly~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~--~~~~~~l~~~~~~~~~l~snaLaii 181 (197)
+|++++++|++++.++...+...+.+.++|++||||||||||+||+|||.+.+ +.+++.|...+.++.+|+||+|||+
T Consensus 107 LlddavD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLAlv 186 (566)
T PLN02713 107 LAGLNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLALF 186 (566)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998543322356789999999999999999999998764 4567789999999999999999999
Q ss_pred Hh
Q 029211 182 NK 183 (197)
Q Consensus 182 ~~ 183 (197)
+.
T Consensus 187 ~~ 188 (566)
T PLN02713 187 TK 188 (566)
T ss_pred cc
Confidence 86
No 12
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1.1e-31 Score=240.19 Aligned_cols=175 Identities=22% Similarity=0.309 Sum_probs=142.8
Q ss_pred HHHHHHHHHHhhc-------CCCCCchhHHHHhcCCCCCChhhHHhhhccCcccC-CCChHHHHHHHHHHHHHHHHHHHH
Q 029211 8 MLFMLLAWLAKSG-------ESASGNRNNFVRDACSVTTYRDLCIHSLAPFSKSA-RNSPGKWARAGVSVTIGEVKNVTQ 79 (197)
Q Consensus 8 ~~~l~~~~~~~~~-------~~~~~~~~~~v~~~C~~T~~p~~C~~sL~~~p~s~-~~d~~~l~~~~i~~a~~~a~~~~~ 79 (197)
+||.|.+|+++++ +.+..++.+.|+++|+.|+||++|+++|++++... ..++.++++++++.++.++..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~ 90 (541)
T PLN02416 11 FLLFFSPFFFSSAWYSNASYTTSLDPHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTN 90 (541)
T ss_pred HHHHcchhhccchhhcccccccCCchHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445666654 12333446689999999999999999999987532 357889999999999999998888
Q ss_pred HHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchH
Q 029211 80 FLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQ 159 (197)
Q Consensus 80 ~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~ 159 (197)
.++.+.......+..+.|++||.|+|++++++|++++.+|+..+ .+.++|++||||||||||+||+|||++.++.+
T Consensus 91 l~s~~~~~~~~~~~~k~AL~DC~El~~dAvD~L~~Sl~~L~~~~----~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~ 166 (541)
T PLN02416 91 LLSGAGQSSNIIEKQRGTIQDCKELHQITVSSLKRSVSRIQAGD----SRKLADARAYLSAALTNKNTCLEGLDSASGPL 166 (541)
T ss_pred HHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccchhhHHHHHHHHhcchhhHHhhhhhcCcch
Confidence 87766433345688899999999999999999999999998532 13679999999999999999999998766667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029211 160 VDLLKKRVLKTTYLASNALALINKLAT 186 (197)
Q Consensus 160 ~~~l~~~~~~~~~l~snaLaii~~~~~ 186 (197)
+++|...+.++.+++||+|||++.+..
T Consensus 167 ~~~i~~~~~~v~qltSNALAlv~~~~~ 193 (541)
T PLN02416 167 KPKLVNSFTSTYKHVSNSLSMLPKSRR 193 (541)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 888999999999999999999987654
No 13
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=3.1e-31 Score=236.86 Aligned_cols=181 Identities=27% Similarity=0.421 Sum_probs=146.4
Q ss_pred hHHHHHHHHHHHHhhcC--CCCC----chhHHHHhcCCCCCChhhHHhhhccCccc-CCCChHHHHHHHHHHHHHHHHHH
Q 029211 5 NMFMLFMLLAWLAKSGE--SASG----NRNNFVRDACSVTTYRDLCIHSLAPFSKS-ARNSPGKWARAGVSVTIGEVKNV 77 (197)
Q Consensus 5 ~~~~~~l~~~~~~~~~~--~~~~----~~~~~v~~~C~~T~~p~~C~~sL~~~p~s-~~~d~~~l~~~~i~~a~~~a~~~ 77 (197)
.+++.|+++++-+-+-+ .++. .....|+.+|+.|+||++|+++|+++... ...+|.+|+++++++++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a 84 (537)
T PLN02506 5 NFLLILMLLPVHLESLETTSSSPYQELNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLA 84 (537)
T ss_pred HHHHHHHHHhcchhccCCcccCchhhhhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35556666666553321 2222 33568999999999999999999986433 34689999999999999999999
Q ss_pred HHHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hhhhhhhhhHHHHHHhhhcCcchHhhcccCCc
Q 029211 78 TQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLSA-REFDRQMDDLTTFVSAALTYEDTCLDGFEGQK 156 (197)
Q Consensus 78 ~~~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~-~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~ 156 (197)
...+.++.+. ..+++.+.|++||.|+|++++++|.+++.+++.... .......+|++|||||||||++||+|||++.+
T Consensus 85 ~~~v~~l~~~-~~~~r~~~Al~DC~EllddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~ 163 (537)
T PLN02506 85 IDMITKFNAL-SISYREQVAIEDCKELLDFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTD 163 (537)
T ss_pred HHHHHHHhhc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcc
Confidence 9999988543 467889999999999999999999999999864321 11112358999999999999999999998766
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029211 157 ATQVDLLKKRVLKTTYLASNALALINKLAT 186 (197)
Q Consensus 157 ~~~~~~l~~~~~~~~~l~snaLaii~~~~~ 186 (197)
+++++.|...+.++.+|+||+|||++.+..
T Consensus 164 ~~~k~~v~~~l~nv~~LtSNALAiv~~l~~ 193 (537)
T PLN02506 164 RHLENFIKGSLKQVTQLISNVLAMYTQLHS 193 (537)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 677888999999999999999999997665
No 14
>PLN02197 pectinesterase
Probab=99.97 E-value=9.8e-31 Score=235.25 Aligned_cols=153 Identities=18% Similarity=0.369 Sum_probs=132.5
Q ss_pred hHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCCChhhHHHHHHHHHHH
Q 029211 28 NNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLK--RRNLMRGRNRLALLDCIECF 105 (197)
Q Consensus 28 ~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~--~~~~~~~~~~~al~dC~ely 105 (197)
...|+.+|+.|+||++|+++|++++ ..+|.+|++++++++++++..+...++.+. .....+++++.|++||.|+|
T Consensus 38 ~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~eLl 114 (588)
T PLN02197 38 MKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKRVF 114 (588)
T ss_pred HHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Confidence 4489999999999999999999988 258999999999999999999999888663 12245789999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 029211 106 QETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINKLA 185 (197)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~~~ 185 (197)
++++|+|++++.++.. +........+|++||||||||||+||.|||.+. .+++.|...+.++.+|+||+|||++.+.
T Consensus 115 ~davd~L~~Sl~~l~~-~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~--~~k~~v~~~l~nv~~LtSNaLAiv~~ls 191 (588)
T PLN02197 115 MYALEDLSTIVEEMGE-DLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED--DLRKTIGEGIANSKILTSNAIDIFHSVV 191 (588)
T ss_pred HHHHHHHHHHHHHHhh-cccccccchhhHHHHHHHHHhChhhhhccccCc--chHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999983 122233457999999999999999999999874 3677899999999999999999999865
Q ss_pred h
Q 029211 186 T 186 (197)
Q Consensus 186 ~ 186 (197)
.
T Consensus 192 ~ 192 (588)
T PLN02197 192 S 192 (588)
T ss_pred h
Confidence 4
No 15
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.5e-30 Score=234.75 Aligned_cols=153 Identities=20% Similarity=0.433 Sum_probs=135.1
Q ss_pred HHHHhcCCCCCChhhHHhhhccCcc--cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHH
Q 029211 29 NFVRDACSVTTYRDLCIHSLAPFSK--SARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQ 106 (197)
Q Consensus 29 ~~v~~~C~~T~~p~~C~~sL~~~p~--s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely~ 106 (197)
+.|+.+|+.|+||++|+++|+++.. +...+|.+|++++|+++++++..+...+.++. ..+++.+.|++||.|+|+
T Consensus 80 ~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~---~~~~r~k~Al~DC~ELld 156 (596)
T PLN02745 80 KIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK---FENPDEKDAIEDCKLLVE 156 (596)
T ss_pred HHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCHHHHHHHHHHHHHHH
Confidence 6799999999999999999998653 23468999999999999999999998888773 467899999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029211 107 ETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINKLAT 186 (197)
Q Consensus 107 ~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~~~~ 186 (197)
+++++|++++.+|.. +...+.+.++|++||||||||||+||+|||++. +++++|...+.++.+|+||+|||++.+..
T Consensus 157 dAid~L~~Sl~~l~~-~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~--~l~s~m~~~l~~~~eLtSNALAiv~~lss 233 (596)
T PLN02745 157 DAKEELKASISRIND-EVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEG--KLKSEMEKTFKSSQELTSNSLAMVSSLTS 233 (596)
T ss_pred HHHHHHHHHHHHHhh-cccccccchHHHHHHHHHHhccHhHHHhhhccc--chHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999975 323345678999999999999999999999873 47889999999999999999999998766
Q ss_pred c
Q 029211 187 T 187 (197)
Q Consensus 187 ~ 187 (197)
.
T Consensus 234 ~ 234 (596)
T PLN02745 234 F 234 (596)
T ss_pred h
Confidence 3
No 16
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.2e-30 Score=231.66 Aligned_cols=158 Identities=18% Similarity=0.314 Sum_probs=137.4
Q ss_pred CCchhHHHHhcCCCCCChhhHHhhhccCccc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHH
Q 029211 24 SGNRNNFVRDACSVTTYRDLCIHSLAPFSKS--ARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDC 101 (197)
Q Consensus 24 ~~~~~~~v~~~C~~T~~p~~C~~sL~~~p~s--~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC 101 (197)
+..+...|+..|+.|+||++|+++|++++.. ...+|.+|++++|+++++++..+...++++.. .+.++..+.|++||
T Consensus 46 ~~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-~~~~~~~~aAL~DC 124 (548)
T PLN02301 46 SSSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-RINDPRDKAALADC 124 (548)
T ss_pred CCCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCChHHHHHHHHH
Confidence 4455679999999999999999999988754 34589999999999999999999999998854 35788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 102 IECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALI 181 (197)
Q Consensus 102 ~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii 181 (197)
.|+|++++++|++++.+++.... +.++|++||||||||||+||+|||.+.. +++|...++++.+|+||+|||+
T Consensus 125 ~ELl~davd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TC~DGF~~~~---~~~~~~~l~n~~qL~SNsLAiv 197 (548)
T PLN02301 125 VELMDLSKDRIKDSVEALGNVTS----KSHADAHTWLSSVLTNHVTCLDGINGPS---RQSMKPGLKDLISRARTSLAIL 197 (548)
T ss_pred HHHHHHHHHHHHHHHHHhhcccc----cchHHHHHHHHHHhcchhhHHhhhhhhh---hhhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999885432 3468999999999999999999998653 5778999999999999999999
Q ss_pred HhhhhcCc
Q 029211 182 NKLATTSL 189 (197)
Q Consensus 182 ~~~~~~g~ 189 (197)
+.+...+.
T Consensus 198 ~~l~~~~~ 205 (548)
T PLN02301 198 VSVSPAKE 205 (548)
T ss_pred cccccccc
Confidence 98765543
No 17
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.97 E-value=3.6e-30 Score=195.95 Aligned_cols=147 Identities=32% Similarity=0.514 Sum_probs=127.9
Q ss_pred hhHHHHhcCCCCCChh-hHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHH
Q 029211 27 RNNFVRDACSVTTYRD-LCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECF 105 (197)
Q Consensus 27 ~~~~v~~~C~~T~~p~-~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely 105 (197)
+...|+++|++|+||. +|+.+|.+++.....|+.+|++++|++++.++..+..++.++.+..+.++..+.+|++|.++|
T Consensus 3 ~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~y 82 (152)
T PF04043_consen 3 TSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQELY 82 (152)
T ss_dssp -HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHHH
Confidence 5678999999999777 999999999877778999999999999999999999999998865467899999999999999
Q ss_pred HHHHHHHHHHHHHH--hhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 029211 106 QETIDELHMSLGIL--RRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALAL 180 (197)
Q Consensus 106 ~~a~~~L~~a~~~l--~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLai 180 (197)
++++++|++++.++ .. ..++++++|||+++++++||+|+|.+..++.+++|...+.++.+|++|+|+|
T Consensus 83 ~~a~~~l~~a~~~l~~~~-------~~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 83 DDAVDSLQRALEALNSKN-------GDYDDARTWLSAALTNQDTCEDGFEEAGSPVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHHHHHHHHHH--HH-------T-HHHHHHHHHHHHHHHHHHHHHC-TTSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccc-------chhHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhC
Confidence 99999999999999 54 4688999999999999999999995333567889999999999999999997
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.9e-30 Score=226.80 Aligned_cols=164 Identities=22% Similarity=0.322 Sum_probs=138.5
Q ss_pred HHHhhcC-CCCCchhHHHHhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--C
Q 029211 15 WLAKSGE-SASGNRNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLM--R 91 (197)
Q Consensus 15 ~~~~~~~-~~~~~~~~~v~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~--~ 91 (197)
|+++.+. .-+.+....|+.+|+.|+||++|+++|++.+. +|.++++++|++++.+++.+...+.++....+. +
T Consensus 8 ~~~~~~~~~~~~~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~ 83 (497)
T PLN02698 8 WVLGASSRNMPFAYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEA 83 (497)
T ss_pred hhhccccccCchhHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcC
Confidence 5554331 23445677899999999999999999999774 899999999999999999999999987654333 3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCC----cchHHHHHHHHH
Q 029211 92 GRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQ----KATQVDLLKKRV 167 (197)
Q Consensus 92 ~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~----~~~~~~~l~~~~ 167 (197)
++.+.+++||.|+|++++++|++++.+|.... .+.++|++||||||||||+||+|||.+. ++.+++.|...+
T Consensus 84 ~r~~~Al~DC~Ell~dsvd~L~~Sl~~l~~~~----~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l 159 (497)
T PLN02698 84 TYTPSVSDSCERLMKMSLKRLRQSLLALKGSS----RKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKM 159 (497)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHH
Confidence 77789999999999999999999999988642 1457999999999999999999999532 246788999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 029211 168 LKTTYLASNALALINKLAT 186 (197)
Q Consensus 168 ~~~~~l~snaLaii~~~~~ 186 (197)
.++.+|+||+|||++.+..
T Consensus 160 ~~~~~ltSNALAmv~~l~~ 178 (497)
T PLN02698 160 DHLSRLVSNSLALVNRITP 178 (497)
T ss_pred HHHHHHHHHHHHHHhhhhc
Confidence 9999999999999998765
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.96 E-value=2.8e-29 Score=224.78 Aligned_cols=150 Identities=23% Similarity=0.312 Sum_probs=130.8
Q ss_pred HhcCCCCCChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCChhhHHHHHHHHHHHHH
Q 029211 32 RDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRR----NLMRGRNRLALLDCIECFQE 107 (197)
Q Consensus 32 ~~~C~~T~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~----~~~~~~~~~al~dC~ely~~ 107 (197)
...|+.|+||++|+++|++++... .+|.++++++|++++.++..+...++++... .+.+++++.|++||+|++++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~-~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELldd 81 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSP-SDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSEL 81 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHH
Confidence 568999999999999999877543 5899999999999999999999999987632 14678889999999999999
Q ss_pred HHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 029211 108 TIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINK 183 (197)
Q Consensus 108 a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~ 183 (197)
++|+|.+++.+|..... ......+|++||||||||||+||.|||.+.++.++..|...+.++.+|+||+|||++.
T Consensus 82 SvD~L~~Sl~~L~~~~~-~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 82 NVDYLETISSELKSAEL-MTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHHhcccc-ccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999985421 1234578999999999999999999998766667888999999999999999999985
No 20
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=1.2e-23 Score=187.37 Aligned_cols=126 Identities=20% Similarity=0.358 Sum_probs=107.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhh--hhhhhhhHHH
Q 029211 59 PGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLSARE--FDRQMDDLTT 136 (197)
Q Consensus 59 ~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~--~~~~~~d~~t 136 (197)
+..++++++++++++++.+...+.++.+. ..+++.+.|++||.|++++++|+|++++.+|+..+... .....+|++|
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~~-~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~DvqT 115 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDKV-FGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLRT 115 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHH
Confidence 55677888999999999999999988653 45788899999999999999999999999998543211 1345799999
Q ss_pred HHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 029211 137 FVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINKLA 185 (197)
Q Consensus 137 wLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~~~ 185 (197)
|||||||||+||+|||.+.++.++..+...+.++.+|+||+|||++...
T Consensus 116 WLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~~~ 164 (520)
T PLN02201 116 WLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHPPP 164 (520)
T ss_pred HHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999876656777788999999999999999998754
No 21
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=1.4e-22 Score=180.39 Aligned_cols=125 Identities=28% Similarity=0.438 Sum_probs=109.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhH
Q 029211 57 NSPGKWARAGVSVTIGEVKNVTQFLYKLKRRN--LMRGRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDL 134 (197)
Q Consensus 57 ~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~--~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~ 134 (197)
.+|.+|++++|+++++++..+...+.++.+.. +.+++++.|++||.|+|++++++|++++.++.... ..++|+
T Consensus 49 ~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~~-----~~~~Dv 123 (530)
T PLN02933 49 KTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSSS-----PEFNDV 123 (530)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cchhHH
Confidence 58999999999999999999999999886432 46789999999999999999999999999988521 347999
Q ss_pred HHHHHhhhcCcchHhhcccCCc--------chHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029211 135 TTFVSAALTYEDTCLDGFEGQK--------ATQVDLLKKRVLKTTYLASNALALINKLAT 186 (197)
Q Consensus 135 ~twLSaalt~~~TC~dgf~~~~--------~~~~~~l~~~~~~~~~l~snaLaii~~~~~ 186 (197)
+||||||||||+||+|||.+.+ +.+++.|...+.++.+|+||+|||++.+..
T Consensus 124 ~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~ 183 (530)
T PLN02933 124 SMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISG 183 (530)
T ss_pred HHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999998653 257788999999999999999999997654
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.9e-22 Score=177.79 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=127.1
Q ss_pred HhcCCCCCChhhHHhhhccCc----ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHH----HH
Q 029211 32 RDACSVTTYRDLCIHSLAPFS----KSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDC----IE 103 (197)
Q Consensus 32 ~~~C~~T~~p~~C~~sL~~~p----~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC----~e 103 (197)
...|.+++||+.|...+.... .....++..++.+.++.++.++..+...+.++.+....+++++.|++|| .|
T Consensus 2 ~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~e 81 (509)
T PLN02488 2 IGVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEE 81 (509)
T ss_pred ceecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHH
Confidence 357999999999999987766 3334569999999999999999999999998876432278999999999 99
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 029211 104 CFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINK 183 (197)
Q Consensus 104 ly~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~ 183 (197)
+|++++++|.+++..+...+... ....+|++||||++||||+||.|||.+ +.++..|...+.++.+|+||+|||++.
T Consensus 82 l~~~~~~~l~~s~~~~~~~~~~~-~~~~~d~~twLSa~lt~q~TC~dg~~~--~~~~~~~~~~l~~~~~~~sn~La~~~~ 158 (509)
T PLN02488 82 MMESAKDRMIRSVEELLGGESPN-LGSYENVHTWLSGVLTSYITCIDEIGE--GAYKRRVEPELEDLISRARVALAIFIS 158 (509)
T ss_pred HHHHHHHHHHHHHHHhhcccccc-cCcHHHHHHHHHHhHhchhhHhccccC--cchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999996432111 133589999999999999999999954 357778999999999999999999987
Q ss_pred hh
Q 029211 184 LA 185 (197)
Q Consensus 184 ~~ 185 (197)
+.
T Consensus 159 ~~ 160 (509)
T PLN02488 159 IS 160 (509)
T ss_pred cc
Confidence 65
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.86 E-value=3.1e-21 Score=171.46 Aligned_cols=130 Identities=18% Similarity=0.193 Sum_probs=100.0
Q ss_pred CChhhHHhhhccCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 39 TYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGI 118 (197)
Q Consensus 39 ~~p~~C~~sL~~~p~s~~~d~~~l~~~~i~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~ 118 (197)
+||+.|..+|++...+ -|..+...++++.+... +.. .. ....+|++||+|++++++++|.+++..
T Consensus 58 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~---------~~~--~~-~~~~~Al~DC~ELlddavd~L~~S~~~ 122 (529)
T PLN02170 58 PSSSSKQGFLSSVQES---MNHALFARSLAFNLTLS---------HRT--VQ-THTFDPVNDCLELLDDTLDMLSRIVVI 122 (529)
T ss_pred CCcchhhhhhhhhhcc---ChHHHHHhhhHhhhhhh---------hhh--cc-cchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999866432 36667777777755511 111 11 222679999999999999999999855
Q ss_pred HhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCc--chHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCc
Q 029211 119 LRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQK--ATQVDLLKKRVLKTTYLASNALALINKLATTSL 189 (197)
Q Consensus 119 l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~--~~~~~~l~~~~~~~~~l~snaLaii~~~~~~g~ 189 (197)
... .+..+|++||||||||||+||.|||++.+ ..++..+...+.++.+|+||+|||++.+...+.
T Consensus 123 ~~~------~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~~~~ 189 (529)
T PLN02170 123 KHA------DHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKSKHS 189 (529)
T ss_pred hcc------ccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 332 25689999999999999999999998765 345566777889999999999999998766544
No 24
>PLN02916 pectinesterase family protein
Probab=99.69 E-value=6.7e-17 Score=143.31 Aligned_cols=89 Identities=28% Similarity=0.294 Sum_probs=73.4
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHH
Q 029211 89 LMRGRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVL 168 (197)
Q Consensus 89 ~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~ 168 (197)
+.+-+...|++||.|+|++++++|.+++..+.. ...+|++||||||||||+||.|||.+.+ ... ...+.
T Consensus 56 ~~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~-------~~~~DvqTWLSAALTnq~TClDGf~~~~-~~~---~~~v~ 124 (502)
T PLN02916 56 GSYYNLGEALSDCEKLYDESEARLSKLLVSHEN-------FTVEDARTWLSGVLANHHTCLDGLEQKG-QGH---KPMAH 124 (502)
T ss_pred CCcccHhHHHHHHHHHHHHHHHHHHHHHHhhcc-------CchHHHHHHHHHHHhCHhHHHHhhhhcc-ccc---hHHHH
Confidence 345667899999999999999999999987653 2469999999999999999999998653 222 33467
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 029211 169 KTTYLASNALALINKLATTS 188 (197)
Q Consensus 169 ~~~~l~snaLaii~~~~~~g 188 (197)
++.+|+||+|||++.+....
T Consensus 125 nvt~ltSNaLAlv~~~~~~~ 144 (502)
T PLN02916 125 NVTFVLSEALALYKKSRGHM 144 (502)
T ss_pred HHHHHHHHHHHHhhhhhhhh
Confidence 99999999999998876533
No 25
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=71.81 E-value=20 Score=21.92 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHH
Q 029211 68 SVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELH 113 (197)
Q Consensus 68 ~~a~~~a~~~~~~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~ 113 (197)
+.++..+..+.+....+.- ...++..+..+..|.+..+..+.+|+
T Consensus 3 kq~lAslK~~qA~Le~fal-~T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 3 KQTLASLKKAQADLETFAL-QTQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHHHhhHHHHHh-hcCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 3444555555555555543 25688889999999999988888775
No 26
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=67.86 E-value=38 Score=23.55 Aligned_cols=60 Identities=3% Similarity=0.161 Sum_probs=38.5
Q ss_pred ChHHHHHHHH--HHHHHHHHHHHHHHHH--HH---hcc--CCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 58 SPGKWARAGV--SVTIGEVKNVTQFLYK--LK---RRN--LMRGRNRLALLDCIECFQETIDELHMSLG 117 (197)
Q Consensus 58 d~~~l~~~~i--~~a~~~a~~~~~~~~~--l~---~~~--~~~~~~~~al~dC~ely~~a~~~L~~a~~ 117 (197)
++.+.+.-.| ..+.++|.+..+.++. +. ..+ +.+...+.|++-|.+-|.++-.-+.++..
T Consensus 17 ~~~~~~m~qVkqqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawniVSrty~ 85 (97)
T KOG1733|consen 17 TTEGELMNQVKQQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWNIVSRTYI 85 (97)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3443444333 4555666666655543 11 122 36788999999999999999888776643
No 27
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=59.57 E-value=37 Score=25.91 Aligned_cols=25 Identities=20% Similarity=0.426 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 029211 98 LLDCIECFQETIDELHMSLGILRRL 122 (197)
Q Consensus 98 l~dC~ely~~a~~~L~~a~~~l~~~ 122 (197)
|++|+.-+..++..|+.++.-|+.+
T Consensus 2 L~~cV~SL~~S~~lL~~Si~~L~~~ 26 (153)
T PF08287_consen 2 LSNCVSSLRSSVQLLQSSIETLDSG 26 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5667777777777777777777654
No 28
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=52.44 E-value=37 Score=21.60 Aligned_cols=29 Identities=7% Similarity=0.259 Sum_probs=23.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 029211 89 LMRGRNRLALLDCIECFQETIDELHMSLG 117 (197)
Q Consensus 89 ~~~~~~~~al~dC~ely~~a~~~L~~a~~ 117 (197)
..+..+..|++.|.+-|-++...+.+...
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788899999999999999888876654
No 29
>PF14290 DUF4370: Domain of unknown function (DUF4370)
Probab=51.79 E-value=1.3e+02 Score=24.31 Aligned_cols=60 Identities=22% Similarity=0.074 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCC
Q 029211 95 RLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQ 155 (197)
Q Consensus 95 ~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~ 155 (197)
..|-+.|.|.+.. +..|..+++.+-+..+.....--+..+.-|-++..-..+-.|.|..-
T Consensus 130 fRAAeAvEeFgG~-L~tLrm~idDl~GlsGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp~ 189 (239)
T PF14290_consen 130 FRAAEAVEEFGGI-LVTLRMEIDDLCGLSGENVKPLPDYIENALRTAYKRYMTYLDSFGPD 189 (239)
T ss_pred HHHHHHHHHhhhh-HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCch
Confidence 4566778766655 88888888887766554443334555666777777778889999653
No 30
>PLN02749 Uncharacterized protein At1g47420
Probab=42.59 E-value=1.5e+02 Score=22.72 Aligned_cols=61 Identities=21% Similarity=0.101 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHhhhcCcchHhhcccCC
Q 029211 94 NRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQ 155 (197)
Q Consensus 94 ~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~d~~twLSaalt~~~TC~dgf~~~ 155 (197)
...|-+.|.+.+. .+..|...++.+-...+.....--+....-|-++..-..+-.|.|..-
T Consensus 63 vfrAAeAveeFgG-~L~sLrmeidDl~GlsGEnv~PLPd~~~~Al~tay~rY~~YLdsFgp~ 123 (173)
T PLN02749 63 VFRAAEAVEEFGG-TLVSLRMEIDDLIGLSGENVKPLPDYIENALETAYQRYAAYLDSFGPE 123 (173)
T ss_pred HHHHHHHHHHHhh-HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCch
Confidence 3456677877666 888888888887766554433334455555666766677888999653
No 31
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=38.87 E-value=1.8e+02 Score=28.54 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=68.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchh----hh-hhhhhhHHHHHHhhhcCcchHhhcccCCcc----h
Q 029211 91 RGRNRLALLDCIECFQETIDELHMSLGILRR---LSAR----EF-DRQMDDLTTFVSAALTYEDTCLDGFEGQKA----T 158 (197)
Q Consensus 91 ~~~~~~al~dC~ely~~a~~~L~~a~~~l~~---~~~~----~~-~~~~~d~~twLSaalt~~~TC~dgf~~~~~----~ 158 (197)
.|+++..++.+......|+++..-+...-.. .... .+ ..--.|++|-|++.+.+.+|=.+--+..+. +
T Consensus 620 ~p~~~rlL~a~~~q~AlAler~~L~~~~~~a~l~~e~E~lRsaLL~sISHDLRTPLt~i~Gaa~tL~~~~~~l~~~~~ae 699 (890)
T COG2205 620 APEQRRLLDAVLTQIALALERVTLAEEAEQARLAAERERLRSALLASISHDLRTPLTAIMGAAETLLLDGEALSPEDRAE 699 (890)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcHHHHhhhHHHhhhcccccCcHhHHH
Confidence 4667788999999999999876544332111 0011 11 223469999999999998887765555442 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcccccc
Q 029211 159 QVDLLKKRVLKTTYLASNALALINKLATTSLESLAL 194 (197)
Q Consensus 159 ~~~~l~~~~~~~~~l~snaLaii~~~~~~g~~~~~~ 194 (197)
.-+.+......+..|+.|-|+|.+--++.-..-+.|
T Consensus 700 Ll~~I~ees~~L~rlV~NLLdmTRi~sG~~~l~~~~ 735 (890)
T COG2205 700 LLSSIREESERLTRLVTNLLDMTRLQSGGVNLKLDW 735 (890)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhcCCcccccch
Confidence 345677788899999999999977444433344444
No 32
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=38.02 E-value=33 Score=23.63 Aligned_cols=27 Identities=22% Similarity=0.222 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 029211 96 LALLDCIECFQETIDELHMSLGILRRL 122 (197)
Q Consensus 96 ~al~dC~ely~~a~~~L~~a~~~l~~~ 122 (197)
.-..||.|-+-+-+.++++|..++++.
T Consensus 65 ATfnDc~eA~veL~~~IkEAr~~L~rk 91 (95)
T KOG4841|consen 65 ATFNDCEEAAVELQSQIKEARADLARK 91 (95)
T ss_pred eccCCcHHHHHHHHHHHHHHHHHHHHc
Confidence 356799999999999999999999864
No 33
>PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Autophagy protein 17 (Apg17) is required for activating Apg1 protein kinases. This entry also contains Autophagy protein 11 which is involved in cytoplasm to vacuole transport (Cvt) and pexophagy. ; GO: 0006914 autophagy
Probab=37.49 E-value=2.8e+02 Score=24.55 Aligned_cols=13 Identities=23% Similarity=0.490 Sum_probs=11.2
Q ss_pred CCCChhhHHhhhc
Q 029211 37 VTTYRDLCIHSLA 49 (197)
Q Consensus 37 ~T~~p~~C~~sL~ 49 (197)
-|.|++.|+..+.
T Consensus 215 Lt~HfDqC~~a~~ 227 (412)
T PF04108_consen 215 LTNHFDQCVTAVR 227 (412)
T ss_pred HHHHHHHHHHHHH
Confidence 3789999999886
No 34
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=32.12 E-value=50 Score=22.64 Aligned_cols=20 Identities=10% Similarity=0.079 Sum_probs=14.5
Q ss_pred CCchhHHHHHHHHHHHHhhc
Q 029211 1 MAGPNMFMLFMLLAWLAKSG 20 (197)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~ 20 (197)
|||++.++-||-+.+.+..|
T Consensus 1 MaRRlwiLslLAVtLtVALA 20 (100)
T PF05984_consen 1 MARRLWILSLLAVTLTVALA 20 (100)
T ss_pred CchhhHHHHHHHHHHHHHhh
Confidence 99998777666666666654
No 35
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=31.22 E-value=46 Score=23.29 Aligned_cols=12 Identities=33% Similarity=0.506 Sum_probs=5.4
Q ss_pred CCchhHHHHHHH
Q 029211 1 MAGPNMFMLFML 12 (197)
Q Consensus 1 m~~~~~~~~~l~ 12 (197)
||-..+++|.||
T Consensus 1 MaSK~~llL~l~ 12 (95)
T PF07172_consen 1 MASKAFLLLGLL 12 (95)
T ss_pred CchhHHHHHHHH
Confidence 774444443333
No 36
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=30.17 E-value=44 Score=23.21 Aligned_cols=26 Identities=27% Similarity=0.353 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 029211 97 ALLDCIECFQETIDELHMSLGILRRL 122 (197)
Q Consensus 97 al~dC~ely~~a~~~L~~a~~~l~~~ 122 (197)
-.+||.|-|++-..++++|.+.+++.
T Consensus 62 tFnDcpeA~~eL~~eI~eAK~dLr~k 87 (91)
T PF08285_consen 62 TFNDCPEAAKELQKEIKEAKADLRKK 87 (91)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 46789999999999999999999864
No 37
>PF03487 IL13: Interleukin-13; InterPro: IPR020470 Interleukin-13 (IL-13) is a pleiotropic cytokine which may be important in the regulation of the inflammatory and immune responses []. It inhibits inflammatory cytokine production and synergises with IL-2 in regulating interferon-gamma synthesis. The sequences of IL-4 and IL-13 are distantly related.; PDB: 3G6D_A 3L5W_J 3BPO_A 1GA3_A 1IK0_A 3L5X_A 3L5Y_A 1IJZ_A 3LB6_B.
Probab=28.94 E-value=67 Score=18.79 Aligned_cols=18 Identities=22% Similarity=0.584 Sum_probs=0.0
Q ss_pred HHHHhhhcCcchHhhcccCC
Q 029211 136 TFVSAALTYEDTCLDGFEGQ 155 (197)
Q Consensus 136 twLSaalt~~~TC~dgf~~~ 155 (197)
-|+..++ .-||..|+..-
T Consensus 3 lwlt~vi--altClggLasP 20 (43)
T PF03487_consen 3 LWLTVVI--ALTCLGGLASP 20 (43)
T ss_dssp --------------------
T ss_pred HHHHHHH--HHHHhcccCCC
Confidence 4777776 47899999754
No 38
>PF15240 Pro-rich: Proline-rich
Probab=28.53 E-value=32 Score=26.99 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHh
Q 029211 6 MFMLFMLLAWLAK 18 (197)
Q Consensus 6 ~~~~~l~~~~~~~ 18 (197)
|+|+||.++||+-
T Consensus 1 MLlVLLSvALLAL 13 (179)
T PF15240_consen 1 MLLVLLSVALLAL 13 (179)
T ss_pred ChhHHHHHHHHHh
Confidence 3566666666663
No 39
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=25.71 E-value=21 Score=24.21 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=10.1
Q ss_pred hhHHHHhcCCCCCChhhHHhhhccCccc
Q 029211 27 RNNFVRDACSVTTYRDLCIHSLAPFSKS 54 (197)
Q Consensus 27 ~~~~v~~~C~~T~~p~~C~~sL~~~p~s 54 (197)
..+.|++.|..|++| +|..+|+.
T Consensus 48 ~~~DieqaCa~tpFP-----tL~tdpGp 70 (80)
T PF11895_consen 48 SPADIEQACASTPFP-----TLPTDPGP 70 (80)
T ss_dssp -GGGB--S-SSS----------EB-SSS
T ss_pred CHHHHHhhccCCCCC-----CCcCCCCC
Confidence 467899999999999 66666654
No 40
>PF01093 Clusterin: Clusterin; InterPro: IPR000753 Clusterin is a vertebrate glycoprotein [], the exact function of which is not yet clear. Clusterin expression is complex, appearing as different forms in different cell compartments. One set of proteins is directed for secretion, and other clusterin species are expressed in the cytoplasm and nucleus. The secretory form of the clusterin protein (sCLU) is targeted to the ER by an initial leader peptide. This ~60kDa pre-sCLU protein is further glycosylated and proteolytically cleaved into alpha- and beta-subunits, held together by disulphide bonds. External sCLU is an 80kDa protein and may act as a molecular chaperone, scavenging denatured proteins outside cells following specific stress-induced injury such as heat shock. sCLU possesses nonspecific binding activity to hydrophobic domains of various proteins in vitro []. A specific nuclear form of CLU (nCLU) acts as a pro-death signal, inhibiting cell growth and survival. The nCLU protein has two coiled-coil domains, one at its N terminus that is unable to bind Ku70, and a C-terminal coiled-coil domain that is uniquely able to associate with Ku70 and is minimally required for cell death. Clusterin is synthesized as a precursor polypeptide of about 400 amino acids which is post-translationally cleaved to form two subunits of about 200 amino acids each. The two subunits are linked by five disulphide bonds to form an antiparallel ladder-like structure []. In each of the mature subunits the five cysteines that are involved in disulphide bonds are clustered in domains of about 30 amino acids located in the central part of the subunits. This entry represents the clusterin precursor and related proteins.; GO: 0008219 cell death
Probab=25.19 E-value=4.4e+02 Score=23.82 Aligned_cols=64 Identities=9% Similarity=0.036 Sum_probs=41.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hhhhhhhhhHHHHH-HhhhcCcc-hHhhcccC
Q 029211 91 RGRNRLALLDCIECFQETIDELHMSLGILRRLSA---REFDRQMDDLTTFV-SAALTYED-TCLDGFEG 154 (197)
Q Consensus 91 ~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~---~~~~~~~~d~~twL-Saalt~~~-TC~dgf~~ 154 (197)
....-..|+-|.+-.++|+...++.-..|..... .....--++.+-.| ++.+.++. ||..|+.-
T Consensus 39 h~~Lm~tL~k~kk~KeeAl~l~~e~e~kLee~e~~Cn~sm~~lWeECkpCL~~tCm~FYt~tCr~g~~~ 107 (436)
T PF01093_consen 39 HKELMKTLEKSKKEKEEALKLANEVEEKLEEEEEVCNESMMALWEECKPCLKQTCMRFYTRTCRSGSGL 107 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcccCCCchh
Confidence 3455678999999999999888877777765321 01111224555556 34677776 89988754
No 41
>PF10792 DUF2605: Protein of unknown function (DUF2605); InterPro: IPR019728 This entry represents a protein conserved in Cyanobacteria. The function is not known.
Probab=20.49 E-value=2.6e+02 Score=19.76 Aligned_cols=54 Identities=19% Similarity=0.136 Sum_probs=44.4
Q ss_pred hhhHHHHHHhhhcCcchHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029211 131 MDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINKLAT 186 (197)
Q Consensus 131 ~~d~~twLSaalt~~~TC~dgf~~~~~~~~~~l~~~~~~~~~l~snaLaii~~~~~ 186 (197)
.+|.+.|.+-...--++|.+.|-.. .....+..+++...+=+.-+-++++.-.+
T Consensus 16 LeDF~yWF~Rs~~LLe~e~~~fls~--~eQ~~Ll~Rv~qaq~ev~aa~~Lf~At~~ 69 (98)
T PF10792_consen 16 LEDFQYWFSRSRELLETEPISFLSP--EEQSDLLERVKQAQQEVNAARALFQATDG 69 (98)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 5788999999999999999999653 34667899999999988888888876443
Done!