Query 029221
Match_columns 197
No_of_seqs 148 out of 1038
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 09:26:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029221.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029221hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1638 Steroid reductase [Lip 100.0 1.3E-56 2.9E-61 367.3 17.1 197 1-197 56-257 (257)
2 PLN02392 probable steroid redu 100.0 3.6E-50 7.9E-55 337.9 20.9 194 1-197 52-260 (260)
3 PLN02560 enoyl-CoA reductase 100.0 3.2E-50 7E-55 347.4 19.2 174 23-196 126-308 (308)
4 PLN03164 3-oxo-5-alpha-steroid 100.0 1.5E-49 3.3E-54 340.8 19.0 173 25-197 113-323 (323)
5 KOG1639 Steroid reductase requ 100.0 2E-44 4.3E-49 296.4 12.0 176 21-196 116-297 (297)
6 PF02544 Steroid_dh: 3-oxo-5-a 100.0 1.5E-42 3.3E-47 272.1 16.2 146 52-197 1-150 (150)
7 KOG1640 Predicted steroid redu 100.0 9.1E-40 2E-44 274.0 15.6 174 24-197 122-304 (304)
8 COG3752 Steroid 5-alpha reduct 99.8 2.1E-18 4.5E-23 143.1 11.7 110 87-196 148-266 (272)
9 PF06966 DUF1295: Protein of u 99.8 9.3E-18 2E-22 140.5 15.7 68 86-153 118-185 (235)
10 KOG4650 Predicted steroid redu 99.4 1.9E-11 4.1E-16 101.8 14.4 109 87-196 175-296 (311)
11 PF01222 ERG4_ERG24: Ergostero 99.2 7.2E-11 1.6E-15 106.9 9.7 109 89-197 304-432 (432)
12 PF04191 PEMT: Phospholipid me 98.9 2.4E-08 5.2E-13 73.0 11.2 97 89-185 3-106 (106)
13 KOG1435 Sterol reductase/lamin 98.8 3.6E-09 7.7E-14 94.2 4.2 106 92-197 303-428 (428)
14 COG2020 STE14 Putative protein 98.8 8E-08 1.7E-12 77.9 10.5 109 88-196 69-185 (187)
15 PF04140 ICMT: Isoprenylcystei 98.2 1.7E-05 3.6E-10 57.5 10.0 61 94-154 3-66 (94)
16 KOG2628 Farnesyl cysteine-carb 97.4 0.0011 2.4E-08 53.8 8.2 78 118-196 117-200 (201)
17 COG1755 Uncharacterized protei 97.3 0.0023 5.1E-08 50.6 9.5 84 89-172 71-159 (172)
18 PLN02797 phosphatidyl-N-dimeth 90.7 2.9 6.2E-05 33.0 8.8 61 90-151 67-132 (164)
19 PF13789 DUF4181: Domain of un 58.8 32 0.0007 25.2 5.5 32 120-151 13-46 (110)
20 PF07298 NnrU: NnrU protein; 35.6 2.4E+02 0.0051 22.8 12.3 29 128-157 96-125 (191)
21 COG4094 Predicted membrane pro 35.6 50 0.0011 27.3 3.5 71 124-195 99-173 (219)
22 PF15584 Imm44: Immunity prote 33.6 18 0.0004 26.1 0.6 21 119-139 21-50 (94)
23 PF01148 CTP_transf_1: Cytidyl 33.0 58 0.0013 26.5 3.7 43 96-138 202-248 (259)
24 PF05653 Mg_trans_NIPA: Magnes 31.1 3.4E+02 0.0073 23.5 8.2 17 135-151 45-61 (300)
25 COG3105 Uncharacterized protei 30.9 1.2E+02 0.0025 23.4 4.6 35 136-175 2-36 (138)
26 PF14990 DUF4516: Domain of un 24.6 1.8E+02 0.004 18.3 3.9 29 160-188 14-44 (47)
27 TIGR03813 put_Glu_GABA_T putat 24.4 4.5E+02 0.0098 23.7 8.2 22 106-127 378-399 (474)
28 KOG3308 Uncharacterized protei 23.2 44 0.00095 27.9 1.2 26 116-141 145-171 (225)
29 PF01307 Plant_vir_prot: Plant 21.4 1.3E+02 0.0029 22.0 3.4 16 115-130 34-49 (104)
30 KOG1277 Endosomal membrane pro 20.9 1.1E+02 0.0023 28.8 3.2 25 118-142 275-299 (593)
No 1
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-56 Score=367.29 Aligned_cols=197 Identities=31% Similarity=0.511 Sum_probs=172.2
Q ss_pred CchhhhhHHHHHHHHhhhCCCc-chHHHHHHHHHHHHHHHHHHHHhhccccCCCcchhhHHHHHHHHHHhhhhhe-eec-
Q 029221 1 MLFLYTPSFLAGLASFWLFPHE-GFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMI-YVQ- 77 (197)
Q Consensus 1 ~~~~~~p~~~~~~~~~~~~~~~-~~~~~~l~~l~~~Hy~rR~~E~~fv~~~s~~m~~~~~~~~~~~y~~~~~~~~-~~~- 77 (197)
|++||.|+|++|++.+...|+. .++..++..++++||.+|.+|++|+++.+++||+...++...+..+.+.+.+ |.+
T Consensus 56 w~iqe~Paf~~pl~~~~~~~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a~a~~F~~~NG~lqg~y~~~ 135 (257)
T KOG1638|consen 56 WFIQELPAFAIPLYSLFRGPSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVALAIAFCTLNGTLQGLYLSH 135 (257)
T ss_pred HHHhcCcHHHhhHHHhcCCCcccccccHHHHHHHHHHHHHHHHhheeeecCCCCccHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 7899999999999988777744 3678899999999999999999999998888998777777666655433222 111
Q ss_pred cCCCCCchh--HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCccCcccccchhhHHHHHHHHHHHhhHHH
Q 029221 78 SEGLGEPTI--DLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLY 155 (197)
Q Consensus 78 ~~~~~~~~~--~~~~~g~~lf~~g~~~n~~~h~~L~~lR~~~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~ 155 (197)
-+..+|+.. .+..+|+.+|+.|+++|.++|.+|++|||+++++||||+||||+|||||||||||++|+|+++++++++
T Consensus 136 ~~~~~d~~~~~~r~liG~~lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p 215 (257)
T KOG1638|consen 136 YQLYEDPWVTDIRFLIGVVLFVTGMLINIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLP 215 (257)
T ss_pred cccccCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHH
Confidence 111134332 367899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcceeecccC
Q 029221 156 AFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF 197 (197)
Q Consensus 156 ~~~~~~~~~~~l~~~a~~~~~wY~~~F~~yp~~r~~lIPfi~ 197 (197)
++.|++++++|+.+||.++||||+|||+||||+|||+||||+
T Consensus 216 ~~aFa~ft~~~l~pRA~ahH~WY~~kFe~YPk~RkAlIPfvf 257 (257)
T KOG1638|consen 216 ALAFAFFTICNLGPRAYAHHKWYLKKFEDYPKNRKALIPFVF 257 (257)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhccCCccceeeccccC
Confidence 999999999999999999999999999999999999999986
No 2
>PLN02392 probable steroid reductase DET2
Probab=100.00 E-value=3.6e-50 Score=337.95 Aligned_cols=194 Identities=26% Similarity=0.464 Sum_probs=165.1
Q ss_pred CchhhhhHHHHHHHHhhhCC-CcchHHHHHHHHHHHHHHHHHHHHhhccccC------CCcchhhHHHHHHHHHHhhhhh
Q 029221 1 MLFLYTPSFLAGLASFWLFP-HEGFRFMLLTSALTVHFFKRIVEVLFIHKYS------SGMVLDSAIVISLSYLISTAAM 73 (197)
Q Consensus 1 ~~~~~~p~~~~~~~~~~~~~-~~~~~~~~l~~l~~~Hy~rR~~E~~fv~~~s------~~m~~~~~~~~~~~y~~~~~~~ 73 (197)
|++||+|+++++++.+.... ..++.+.++++++++||++|.+++++..+.| ++||+...+++..+..+.+...
T Consensus 52 W~lmE~P~~~~~~~~~~~~~~~~~~~~~vl~~lf~~HY~~Ra~i~Pl~~~~~~~~~~~~p~p~~i~~~a~~F~~~Ng~lq 131 (260)
T PLN02392 52 WFLMESPTLWLTLLLFPLGQHFTNPKALLLMSPYLLHYFHRTCIYPLRLYRSTSQQNTKGFPVSMALLAFGFNLLNAYLQ 131 (260)
T ss_pred HHHhhccHHHHHHHHHhcCccccccHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCccHHHHHHHHHHHHHHHHHH
Confidence 89999999999987665544 4456788999999999999999999976543 2689988888877776544332
Q ss_pred -----eeeccCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCccCcccccchhhHHHHHHH
Q 029221 74 -----IYVQSEGLGEP--TIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWG 146 (197)
Q Consensus 74 -----~~~~~~~~~~~--~~~~~~~g~~lf~~g~~~n~~~h~~L~~lR~~~~~~y~iP~gglF~~vscPnY~~Eil~w~g 146 (197)
.++. ..++. ...+.++|+++|++|+.+|..+|.+|++|||+| ++|+||+||+|++||||||++|+++|+|
T Consensus 132 ~~wl~~~~~--~y~~~~~~~~~~~iG~~lF~~g~~~N~~sh~~L~~LRk~g-~~Y~iP~GGlF~~VscPnYf~EileW~g 208 (260)
T PLN02392 132 ARWVSHYKD--DYEDGGWFWWRFFGGLVVFLWGMRINVWSDRVLVGLKREG-GGYKVPRGGWFELVSCPNYFGEIVEWLG 208 (260)
T ss_pred HHHHhccCC--cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CeeECCCCCCcCeEcCCcHHHHHHHHHH
Confidence 2211 22221 123578999999999999999999999999988 7999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCcceeecccC
Q 029221 147 IFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKF-EDFPKHVKSIFPYIF 197 (197)
Q Consensus 147 ~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~wY~~~F-~~yp~~r~~lIPfi~ 197 (197)
++++++++.++++++++++||.+||.++||||+||| +||||+||++||||+
T Consensus 209 fal~t~s~~~~~F~~~~~~nl~~rA~~~hkwY~~kFg~~ypk~RkaiIPfi~ 260 (260)
T PLN02392 209 WAVMTWSWAGFGFFLYTCSNLVPRACANHKWYLEKFGEDYPKGRKAVIPFLY 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCCCeEecCccC
Confidence 999999999999999999999999999999999999 599999999999986
No 3
>PLN02560 enoyl-CoA reductase
Probab=100.00 E-value=3.2e-50 Score=347.43 Aligned_cols=174 Identities=22% Similarity=0.327 Sum_probs=156.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhccccC-CCcchhhHHHHHHHHHHhhhhheeec-cCCCCCchhHHHHHHHHHHHHHH
Q 029221 23 GFRFMLLTSALTVHFFKRIVEVLFIHKYS-SGMVLDSAIVISLSYLISTAAMIYVQ-SEGLGEPTIDLKFLGMILFLLGI 100 (197)
Q Consensus 23 ~~~~~~l~~l~~~Hy~rR~~E~~fv~~~s-~~m~~~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~g~~lf~~g~ 100 (197)
+..+.+++.++++||+||++||+|||+|| ++||+.+.++||.|||+++..+++.. ++..+.+...+.++|+++|++|+
T Consensus 126 ~~~~~l~~~~~~~Hy~kR~~Et~fvhrfS~~tmpl~n~~~n~~~Yw~~~~~~~y~~~~~~~~~~~~~~~~~g~~lf~~~~ 205 (308)
T PLN02560 126 HPVQTYAMYYWCFHYAKRILETFFVHRFSHATSPLFNVFRNCAYYWTFGAYIAYFVNHPLYTPVSETQMKVGFGFGLVCQ 205 (308)
T ss_pred chHHHHHHHHHHHHHHHHhhheeeeEeecCCCccHHHHHHHHHHHHHHHHHHhhhcccCCccccchhHHHHHHHHHHHHH
Confidence 46789999999999999999999999999 99999999999999998877665543 33333334456789999999999
Q ss_pred HHHHHHHHHHHhcccC-CCccccccCcCccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 029221 101 SGNFYHHNLLSKMRRN-GEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYL 179 (197)
Q Consensus 101 ~~n~~~h~~L~~lR~~-~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~wY~ 179 (197)
..|+.+|.+|++||++ |+++|+||+||+|++||||||++|+++|+||+++++++++++++++++.+|.+||.++|+||+
T Consensus 206 ~~N~~~h~~L~~LR~~~g~~~y~IP~g~lF~~VscPnY~~Ei~~W~gf~~~t~~~~~~~F~~~~~~~m~~wA~~kh~~Y~ 285 (308)
T PLN02560 206 LANFYCHIILRNLRKPDGKGGYQIPRGFLFNYVTCANYTTEIYQWLGFNIATQTVAGYLFLAVAAAIMTNWALAKHRRLK 285 (308)
T ss_pred HHHHHHHHHHHhcCCCCCCCCeeCCCCCCcCeecCCcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhccc------CCCCcceeeccc
Q 029221 180 SKFED------FPKHVKSIFPYI 196 (197)
Q Consensus 180 ~~F~~------yp~~r~~lIPfi 196 (197)
+||+| |||+|++++|++
T Consensus 286 k~F~d~~~~~~yp~~~~~~pp~~ 308 (308)
T PLN02560 286 KLFDGKDGRPKYPRRWVILPPFL 308 (308)
T ss_pred HhccCccccccCCCceEeCCCcC
Confidence 99976 999777777764
No 4
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional
Probab=100.00 E-value=1.5e-49 Score=340.79 Aligned_cols=173 Identities=27% Similarity=0.512 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccC--CCcchhhHHHHHHHHHHhhhhheee------------------ccCCCC--
Q 029221 25 RFMLLTSALTVHFFKRIVEVLFIHKYS--SGMVLDSAIVISLSYLISTAAMIYV------------------QSEGLG-- 82 (197)
Q Consensus 25 ~~~~l~~l~~~Hy~rR~~E~~fv~~~s--~~m~~~~~~~~~~~y~~~~~~~~~~------------------~~~~~~-- 82 (197)
+..++++|+++|++||++||.||+++| ++||+.||+.|..||+++++..... ......
T Consensus 113 ~~~~~l~L~~lq~lRRLyEslfVskfS~~SrMhl~hYlvGl~fY~~~~lsl~~~~~~~~~~~~~~~~~~~~v~g~~~~~~ 192 (323)
T PLN03164 113 RSVFLLLLMEIHVLRRLYESLYVFKYSPSARMHILGYLTGLFFYVAAPLSLCCNCAPEVAKFVGNQVAEFIVKGKSAMSA 192 (323)
T ss_pred HHHHHHHHHHHHHHHHHHheeeEEecCCcceeeHHHHHHHHHHHHHHHHHHHhccchhhhhhhcccchhhcccccccccc
Confidence 456789999999999999999999988 6899999999999999887754210 000000
Q ss_pred ---------Cch---hHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCCccccccCcCccCcccccchhhHHHHHHHHH
Q 029221 83 ---------EPT---IDLKFLGMILFLLGISGNFYHHNLLSKMR--RNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIF 148 (197)
Q Consensus 83 ---------~~~---~~~~~~g~~lf~~g~~~n~~~h~~L~~lR--~~~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~ 148 (197)
.|. ...+++|+++|++|+..|+.||.+|++|| ++++++|+||+||+|++|+||||++||++|+|++
T Consensus 193 ~~~~~~~~~~~~~~l~~~q~iGl~lFlig~~~n~~~H~iLa~LR~~k~~~~~Y~IP~GglF~~VSCPHYf~EIliw~gfa 272 (323)
T PLN03164 193 IEFDWWDFVSPLMKLGWFQWIGAAIFLWGWIHQYRCHAILGSLREHKKQADEYVIPYGDWFEMVSCPHYLAEIVIYAGLL 272 (323)
T ss_pred cccchHhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCCCCCceEECCCCCCcCeEcCCcHHHHHHHHHHHH
Confidence 010 01358999999999999999999999999 5567899999999999999999999999999999
Q ss_pred HHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcceeecccC
Q 029221 149 FIAQ--TLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF 197 (197)
Q Consensus 149 l~~~--~~~~~~~~~~~~~~l~~~a~~~~~wY~~~F~~yp~~r~~lIPfi~ 197 (197)
++++ +...+++++++++||..+|.++||||+|||+||||+||++||||+
T Consensus 273 l~t~~~~~~~~l~~~~v~~nL~~~A~~tHkWY~kkF~dYPk~RkAIIPfI~ 323 (323)
T PLN03164 273 IASGGTDLTIWLLFGFVVANLTFAAAETHRWYLQKFENYPRNRYAIIPFVY 323 (323)
T ss_pred HHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceEecCccC
Confidence 9987 355677889999999999999999999999999999999999986
No 5
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism]
Probab=100.00 E-value=2e-44 Score=296.38 Aligned_cols=176 Identities=26% Similarity=0.397 Sum_probs=160.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhccccC-CCcchhhHHHHHHHHHHhhhhheeec-cCCCCCchh--HHHHHHHHHH
Q 029221 21 HEGFRFMLLTSALTVHFFKRIVEVLFIHKYS-SGMVLDSAIVISLSYLISTAAMIYVQ-SEGLGEPTI--DLKFLGMILF 96 (197)
Q Consensus 21 ~~~~~~~~l~~l~~~Hy~rR~~E~~fv~~~s-~~m~~~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~--~~~~~g~~lf 96 (197)
.-++.++++..++++||.||++||.|||+|| ++||+.+.+++|.+||.++...+|.. ++.++.+.. .+..+|++.|
T Consensus 116 ~i~~~~~iA~~~~~~Hy~KRl~ET~FvhrFs~atmp~~nlfKnC~~yw~~~~~vaYfvnhp~~t~~~~~~~~~~~~l~~f 195 (297)
T KOG1639|consen 116 VIHPLQRIAFFLWLFHYGKRLLETIFVHRFSLATMPIFNLFKNCFYYWGFSALVAYFVNHPLFTPPKLGKLQVKLGLGGF 195 (297)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHhhHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhhhHHH
Confidence 3457789999999999999999999999999 99999999999999999888766554 555555543 4678999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCcccccc--CcCccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 029221 97 LLGISGNFYHHNLLSKMRRNGEKEYKIP--TSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYAT 174 (197)
Q Consensus 97 ~~g~~~n~~~h~~L~~lR~~~~~~y~iP--~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~~~~~~~~l~~~a~~~ 174 (197)
+++++.|+.+|..|++||..|+++.+|| +|.+|++||||||+.|+..|+||++++++++++++....+.+|..||..+
T Consensus 196 v~~el~NF~~HI~LR~lrp~g~k~r~ip~~~g~lFnlvscpNYt~Ev~sWi~F~i~tq~l~a~lFl~vg~aqMtiWA~~K 275 (297)
T KOG1639|consen 196 VLCELGNFSCHILLRNLRPAGSKKRRIPLPDGFLFNLVSCPNYTYEVGSWIGFAIMTQCLAAYLFLTVGAAQMTIWAKGK 275 (297)
T ss_pred hhhhhcceeeEeehhhccCCcCccceeecCCccEEEEEecCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998887776 57789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCcceeeccc
Q 029221 175 RAWYLSKFEDFPKHVKSIFPYI 196 (197)
Q Consensus 175 ~~wY~~~F~~yp~~r~~lIPfi 196 (197)
|+.|+|+|+|||++|+.+|||+
T Consensus 276 h~~ylKeFp~Ypr~r~~iiPFv 297 (297)
T KOG1639|consen 276 HRRYLKEFPDYPRRRKIIIPFV 297 (297)
T ss_pred hHhHhhhcccCCccccccCCCC
Confidence 9999999999999999999996
No 6
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1.3.99.5 from EC catalyse the conversion of 3-oxo-5-alpha-steroid + acceptor to 3-oxo-delta(4)-steroid + reduced acceptor. The steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during foetal development []. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related steroid reductase enzyme, DET2, is found in plants such as Arabidopsis. Mutations in this enzyme cause defects in light-regulated development []. This domain is present in both type 1 and type 2 forms.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006629 lipid metabolic process, 0005737 cytoplasm, 0016021 integral to membrane
Probab=100.00 E-value=1.5e-42 Score=272.06 Aligned_cols=146 Identities=33% Similarity=0.662 Sum_probs=125.8
Q ss_pred CCcchhhHHHHHHHHHHhhhhhe-ee-c-cCCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcC
Q 029221 52 SGMVLDSAIVISLSYLISTAAMI-YV-Q-SEGLGEP-TIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSG 127 (197)
Q Consensus 52 ~~m~~~~~~~~~~~y~~~~~~~~-~~-~-~~~~~~~-~~~~~~~g~~lf~~g~~~n~~~h~~L~~lR~~~~~~y~iP~gg 127 (197)
.+||+++.++++.|+.+.+...+ +. . .....+. ...+.++|+++|++|+..|+.+|.+|+++|++++++|++|+||
T Consensus 1 ~~mpi~~~~~~~~f~~~ng~l~~~~~~~~~~~~~~~~~~~~~~~g~~lf~~g~~~n~~~h~~L~~lr~~~~~~y~iP~gg 80 (150)
T PF02544_consen 1 NTMPISNVFMNCFFWVLNGYLIGYYLSYYAPYQYTWLPSPRFIIGLALFLIGSIGNFYSHLILANLRKPGSKKYKIPKGG 80 (150)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCceeCCCCC
Confidence 47999999999996655433322 11 1 1111111 1245789999999999999999999999999999999999999
Q ss_pred ccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcceeecccC
Q 029221 128 LFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF 197 (197)
Q Consensus 128 lF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~wY~~~F~~yp~~r~~lIPfi~ 197 (197)
+|++|+||||++|+++|+|+++++++++++.+++++++||.+||.++|+||+|||+|||++||++||||+
T Consensus 81 ~F~~vscP~Y~~Eil~w~~f~l~~~~~~~~~f~~~~~~~l~~~A~~~h~wY~~~F~~yp~~R~~lIPfi~ 150 (150)
T PF02544_consen 81 LFEYVSCPHYFFEILIWIGFALLTGSWPSYAFALFVVVNLSPRAVQTHRWYKKKFKEYPKNRKALIPFIF 150 (150)
T ss_pred CcceeeehhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHCccccCCCeEecCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996
No 7
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism]
Probab=100.00 E-value=9.1e-40 Score=274.02 Aligned_cols=174 Identities=32% Similarity=0.568 Sum_probs=150.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccC--CCcchhhHHHHHHHHHHhhhhh-eeec--cCC--CCCchhHHHHHHHHHH
Q 029221 24 FRFMLLTSALTVHFFKRIVEVLFIHKYS--SGMVLDSAIVISLSYLISTAAM-IYVQ--SEG--LGEPTIDLKFLGMILF 96 (197)
Q Consensus 24 ~~~~~l~~l~~~Hy~rR~~E~~fv~~~s--~~m~~~~~~~~~~~y~~~~~~~-~~~~--~~~--~~~~~~~~~~~g~~lf 96 (197)
....+++.+...|..||+||+.|+..++ ++|+++|++.|.++|...+... ...+ +.+ ....+...+++|.++|
T Consensus 122 ~~~~~~~l~~s~~~~rrlYet~fv~~~~~~s~mnl~hy~vg~V~y~vl~~~l~~~~~g~~~~~~~~~l~~i~q~~g~~iF 201 (304)
T KOG1640|consen 122 LTLQVLLLIYSLHTLRRLYETLFVLVYSVNSKMNLGHYLVGYVFYTVLSLALLLCTNGSSEGPNFNSLSSILQWLGLGIF 201 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeccccchhhHHHHHHHHHHHHHHHHHhhcccccCchhhhHHHHHHHHHHHHH
Confidence 3456777888999999999999999998 8999999999999997655432 1111 111 1111223789999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCC--ccccccCcCccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 029221 97 LLGISGNFYHHNLLSKMRRNGE--KEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYAT 174 (197)
Q Consensus 97 ~~g~~~n~~~h~~L~~lR~~~~--~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~~~~~~~~l~~~a~~~ 174 (197)
++|...|..||.+|.|+||++. ++|.+|+||||++||||||++|+++|.|++....++..|+.+.||++|++..|.++
T Consensus 202 ~i~s~~Qy~~h~iL~nlrk~~~~~~~~~ip~g~~F~~Vs~Ph~L~Ei~iY~~ia~~~~~~~iwLv~~~V~~N~t~aA~~T 281 (304)
T KOG1640|consen 202 AIGSIHQYASHEILGNLRKYPRQAKAYLIPKGGWFKLVSCPHYLAEIIIYVGIALGAPDLTIWLVFGWVAANLTYAALET 281 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhheecCCCCEeeecCChHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864 68999999999999999999999999998888888888899999999999999999
Q ss_pred HHHHHHhcccCCCCcceeecccC
Q 029221 175 RAWYLSKFEDFPKHVKSIFPYIF 197 (197)
Q Consensus 175 ~~wY~~~F~~yp~~r~~lIPfi~ 197 (197)
|+||++||+|||++|+|+|||++
T Consensus 282 h~wY~~kF~~yp~~R~AiiPfl~ 304 (304)
T KOG1640|consen 282 HRWYLKKFENYPKNRHAIIPFLY 304 (304)
T ss_pred HHHHHHhhccCcccccccccccC
Confidence 99999999999999999999986
No 8
>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only]
Probab=99.78 E-value=2.1e-18 Score=143.05 Aligned_cols=110 Identities=17% Similarity=0.329 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCccCcccccchhhHHHHHHHHHHHhhHHH--HH-----HH
Q 029221 87 DLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLY--AF-----CY 159 (197)
Q Consensus 87 ~~~~~g~~lf~~g~~~n~~~h~~L~~lR~~~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~--~~-----~~ 159 (197)
..+++|+++|++|...|...|.||-++|++|+||+|+.+.|||++.||||||||.+.|+|+.+++-+-. .+ +.
T Consensus 148 ~~d~~g~~iwivg~~fE~lgD~QL~~Fk~~P~nkgkll~~GLWr~tRHPNYFgE~l~Wwg~~Lia~~~~~~~W~~~sPll 227 (272)
T COG3752 148 WWDVIGLAIWIVGIVFEALGDAQLWVFKKDPRNKGKLLDTGLWRWTRHPNYFGEALVWWGFYLIAISEWLLLWAVASPLL 227 (272)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhChhhccccccccceecccCcchHHHHHHHHHHHHHHHhhhhHhhhcccHHH
Confidence 567899999999999999999999999999999999999999999999999999999999999875321 11 11
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHhcccCCCCcceeeccc
Q 029221 160 AIGVTFYLMGRS--YATRAWYLSKFEDFPKHVKSIFPYI 196 (197)
Q Consensus 160 ~~~~~~~l~~~a--~~~~~wY~~~F~~yp~~r~~lIPfi 196 (197)
..+-....++.- .++...-|++|++|.++..+++|++
T Consensus 228 mt~LL~~vSGvp~l~ekm~k~r~~fr~Yq~rt~~F~P~~ 266 (272)
T COG3752 228 MTWLLVHVSGVPPLEEKMLKSRPGFREYQRRTNAFFPRP 266 (272)
T ss_pred HHHHHHHhcCCChHHHHHhcccHhHHHHHHHhcccCCCC
Confidence 111112222211 2222233478899999999999985
No 9
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
Probab=99.78 E-value=9.3e-18 Score=140.51 Aligned_cols=68 Identities=29% Similarity=0.483 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCccCcccccchhhHHHHHHHHHHHhhH
Q 029221 86 IDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQT 153 (197)
Q Consensus 86 ~~~~~~g~~lf~~g~~~n~~~h~~L~~lR~~~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~ 153 (197)
...+++|+++|++|...|..+|.|+.++|++++|+.++.+.|+|+|+||||||||++.|+|+.+++.+
T Consensus 118 ~~~~~~g~~l~~~g~~~E~~AD~Q~~~fk~~~~n~g~~~~~GLw~~sRHPNYfGE~l~W~g~~~~a~~ 185 (235)
T PF06966_consen 118 NWLDILGIALFLIGFLLETVADQQKYRFKKDPANKGKFCTTGLWRYSRHPNYFGEILFWWGIYLAAIS 185 (235)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCccccCCeeeeeeCchHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999999999999999999999999999999999999999864
No 10
>KOG4650 consensus Predicted steroid reductase [General function prediction only]
Probab=99.37 E-value=1.9e-11 Score=101.81 Aligned_cols=109 Identities=17% Similarity=0.262 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCcccc-ccCcCccCcccccchhhHHHHHHHHHHHhhH------HHH
Q 029221 87 DLKFLGMILFLLGISGNFYHHNLLSKMR---RNGEKEYK-IPTSGLFDKVVCPHYLFEILGFWGIFFIAQT------LYA 156 (197)
Q Consensus 87 ~~~~~g~~lf~~g~~~n~~~h~~L~~lR---~~~~~~y~-iP~gglF~~vscPnY~~Eil~w~g~~l~~~~------~~~ 156 (197)
+.+.+|..+|+.|+..+..+|.|+-+.+ ++.++++| -.+.|+|+|+|||||+||-+.|.|+.+.+.. +..
T Consensus 175 ~wD~I~~~m~~~gfvie~~ADqQ~~~f~~~~~~l~~~Gk~~~d~GlwrySRHPNylgEqL~Wwglyvfa~~~~egl~wtv 254 (311)
T KOG4650|consen 175 PWDVIGWTMWVFGFVIEALADQQKLSFKEARYDLENLGKGWCDVGLWRYSRHPNYLGEQLLWWGLYVFAAPVLEGLEWTV 254 (311)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhcCHHHcCCccccccceeeccCccHHHHHHHHHHHHHHHhhhhccchHHH
Confidence 5678999999999999999999988876 66666676 8999999999999999999999999988743 111
Q ss_pred HHHHHHH-HHHHHHHHHHHH--HHHHHhcccCCCCcceeeccc
Q 029221 157 FCYAIGV-TFYLMGRSYATR--AWYLSKFEDFPKHVKSIFPYI 196 (197)
Q Consensus 157 ~~~~~~~-~~~l~~~a~~~~--~wY~~~F~~yp~~r~~lIPfi 196 (197)
.....++ +.....+-.+.. +.| +.++.|.|++..+||..
T Consensus 255 i~~lv~~~~l~~~t~lie~~~v~~~-~aYR~Yqktts~~ip~~ 296 (311)
T KOG4650|consen 255 IAGLVFLTLLLLFTSLIELLEVEKY-PAYRVYQKTTSRFIPRL 296 (311)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhh-HHHHHHHhccccccccc
Confidence 1111111 112222222211 111 14577888899999954
No 11
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis. They act by reducing double bonds in precursors of ergosterol []. These proteins are highly hydrophobic and seem to contain seven or eight transmembrane regions. Chicken lamin B receptor that is thought to anchor the lamina to the inner nuclear membrane belongs to this family.; GO: 0016020 membrane
Probab=99.20 E-value=7.2e-11 Score=106.86 Aligned_cols=109 Identities=22% Similarity=0.269 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCC-------------ccccccCcCccCcccccchhhHHHHHHHHHHHhh--H
Q 029221 89 KFLGMILFLLGISGNFYHHNLLSKMRRNGE-------------KEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQ--T 153 (197)
Q Consensus 89 ~~~g~~lf~~g~~~n~~~h~~L~~lR~~~~-------------~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~--~ 153 (197)
...-.+++++|...+..+|.|..++|++|+ ++-++-..|+|.++|||||+||+++=+++++.++ +
T Consensus 304 ~~~i~~l~~~gy~i~r~sn~QK~~FR~~p~~p~~~~~~~~~t~~G~~LL~SGwWg~~Rh~NY~gdil~a~aw~l~~gf~~ 383 (432)
T PF01222_consen 304 AAAILALGLVGYYIFRGSNSQKNRFRRNPKDPKVIHLKYIPTKRGSKLLVSGWWGIARHPNYLGDILMALAWCLPCGFSS 383 (432)
T ss_pred HHHHHHHHHHHHHHHHHhchhHHHhcCCCCCCcccccceeecCCCCeEEEcChhHhhcccchHHHHHHHHHHHHHHhcCc
Confidence 344567788999999999999999997653 2335666899999999999999999999999886 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHhcccCCCC-cceeecccC
Q 029221 154 LYAFCYAIGVTFYLMGRSYATRA----WYLSKFEDFPKH-VKSIFPYIF 197 (197)
Q Consensus 154 ~~~~~~~~~~~~~l~~~a~~~~~----wY~~~F~~yp~~-r~~lIPfi~ 197 (197)
...+...++...-+.-|+.+.++ +|++.+++|-++ ++++||+||
T Consensus 384 ~~pyfy~~~~~~lL~hR~~RD~~rC~~KYG~~W~~Yc~~Vpy~~iP~iy 432 (432)
T PF01222_consen 384 ILPYFYPIFFTILLIHRARRDEERCRKKYGKDWDEYCKRVPYRIIPGIY 432 (432)
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHhhCHHHHHHHHhCCEEEeCCcC
Confidence 44556667777788889886554 555555778776 999999996
No 12
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2.1.1.16 from EC) has a broad substrate specificity of unsaturated phospholipids [].; GO: 0008170 N-methyltransferase activity, 0006644 phospholipid metabolic process
Probab=98.92 E-value=2.4e-08 Score=73.04 Aligned_cols=97 Identities=21% Similarity=0.321 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCC-----CccccccCcCccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHH-
Q 029221 89 KFLGMILFLLGISGNFYHHNLLSKMRRNG-----EKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIG- 162 (197)
Q Consensus 89 ~~~g~~lf~~g~~~n~~~h~~L~~lR~~~-----~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~~~~- 162 (197)
.++|+++.+.|......+...+.+-+... +++.++-++|.|+++|||=|++.++.++|.+++.+++..++....
T Consensus 3 ~~~G~~l~~~g~~l~~~~~~~l~~~~~~~~~~~~~~~~~Lvt~G~Y~~vRhPmY~g~~l~~~G~~l~~~s~~~l~~~~~~ 82 (106)
T PF04191_consen 3 FVLGLLLILAGIALAIWAFKALGRFGTYYGDFFGREPQRLVTTGPYRYVRHPMYLGFLLILLGIALMLGSWLGLLLAVLA 82 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeecCCcccccCCcccccCCccCcCChHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 57899999999999999988887766431 345668999999999999999999999999999998776543333
Q ss_pred HHHHHHHHHHHHHHHHHHhc-ccC
Q 029221 163 VTFYLMGRSYATRAWYLSKF-EDF 185 (197)
Q Consensus 163 ~~~~l~~~a~~~~~wY~~~F-~~y 185 (197)
............+++-+++| +||
T Consensus 83 ~~~~~~~~~~~EE~~L~~~fG~~Y 106 (106)
T PF04191_consen 83 FLLYYIFIIRFEERFLERRFGEEY 106 (106)
T ss_pred HHHHHHHHHHhHHHHHHHHhCcCC
Confidence 33333333324455677888 455
No 13
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.81 E-value=3.6e-09 Score=94.23 Aligned_cols=106 Identities=22% Similarity=0.323 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCC-------------CccccccCcCccCcccccchhhHHHHHHHHHHHhh--HHHH
Q 029221 92 GMILFLLGISGNFYHHNLLSKMRRNG-------------EKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQ--TLYA 156 (197)
Q Consensus 92 g~~lf~~g~~~n~~~h~~L~~lR~~~-------------~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~--~~~~ 156 (197)
-.++.+.|......||.|..++||++ +++.++-..|+|.++|||||++|+++=+++++.++ +...
T Consensus 303 i~~l~l~gyyifr~an~QK~~FRkn~~~~~~~~i~~i~t~~Gs~LL~SGwWG~aRh~nY~gD~i~alawslp~gf~s~lp 382 (428)
T KOG1435|consen 303 ILVLLLLGYYIFRGANAQKNEFRKNPGDPKLKNIKTIYTSTGSKLLVSGWWGVARHPNYLGDLIMALAWSLPCGFNSPLP 382 (428)
T ss_pred HHHHHHhheeEeeccchhHHHHhcCCCCCccccccceEeccCCeEEeechhhhhcCcCcHHHHHHHHHHHHhccCCCCcc
Confidence 34666778888999999999999873 23566777999999999999999999999999886 4444
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHhcccCCC-CcceeecccC
Q 029221 157 FCYAIGVTFYLMGRSYA----TRAWYLSKFEDFPK-HVKSIFPYIF 197 (197)
Q Consensus 157 ~~~~~~~~~~l~~~a~~----~~~wY~~~F~~yp~-~r~~lIPfi~ 197 (197)
....++...-+.-|+.+ .+..|++.+++|-+ -+.++||+|+
T Consensus 383 yfy~iyf~~LLvhR~~RDe~rC~~KYG~~W~~Yc~~VpyriiP~Vy 428 (428)
T KOG1435|consen 383 YFYPIYFTLLLVHRAARDEHRCRSKYGEDWEEYCRKVPYRILPYVY 428 (428)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHhhCCcccCCCCC
Confidence 45566666677777764 33477777788855 4999999986
No 14
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=8e-08 Score=77.93 Aligned_cols=109 Identities=21% Similarity=0.312 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCccccccCcCccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHH
Q 029221 88 LKFLGMILFLLGISGNFYHHNLLSKMR---RNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVT 164 (197)
Q Consensus 88 ~~~~g~~lf~~g~~~n~~~h~~L~~lR---~~~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~~~~~~ 164 (197)
...+|+.+..++...-..++.++.+-. .+.++++++-++|.|++||||=|++.++..+|..+..+++.+.+.+....
T Consensus 69 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LVttG~Y~~VRHP~Y~~~~l~~~g~~~~~~~~~~l~~~~~~~ 148 (187)
T COG2020 69 IVGLGLLLVGLGLALRLWAMRTLGRSWTVSVKARKGHELVTTGPYSIVRHPIYLGLLLFALGTGLLLGSLWALLIFVVLV 148 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCeeEecCCcceecCcHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 456788888888888877777755421 12356888999999999999999999999999999988887765544444
Q ss_pred HHH-HHHHHHHHHHHHHhc----ccCCCCcceeeccc
Q 029221 165 FYL-MGRSYATRAWYLSKF----EDFPKHVKSIFPYI 196 (197)
Q Consensus 165 ~~l-~~~a~~~~~wY~~~F----~~yp~~r~~lIPfi 196 (197)
..+ ..+..+.++.-+++| +||.++.+..||.+
T Consensus 149 ~~~~~~~i~~EEr~L~~~fg~~Y~~Y~~rV~r~iP~~ 185 (187)
T COG2020 149 ALLFLFRIREEERYLRAEFGDEYREYRKRVPRLIPPL 185 (187)
T ss_pred HHHHHHHhhHHHHHHHHHhhHHHHHHHHhCCccCCCC
Confidence 333 445544444444444 67899999999976
No 15
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2.1.1.100 from EC) carries out carboyxl methylation of cleaved eukaryotic proteins that terminate in a CaaX motif. In Saccharomyces cerevisiae (Baker's yeast) this methylation is carried out by Ste14p, an integral endoplasmic reticulum membrane protein. Ste14p is the founding member of the isoprenylcysteine carboxyl methyltransferase (ICMT) family, whose members share significant sequence homology [].; GO: 0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity, 0006481 C-terminal protein methylation, 0016021 integral to membrane; PDB: 4A2N_B.
Probab=98.24 E-value=1.7e-05 Score=57.52 Aligned_cols=61 Identities=23% Similarity=0.215 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcccC---CCccccccCcCccCcccccchhhHHHHHHHHHHHhhHH
Q 029221 94 ILFLLGISGNFYHHNLLSKMRRN---GEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTL 154 (197)
Q Consensus 94 ~lf~~g~~~n~~~h~~L~~lR~~---~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~ 154 (197)
++++.|......+...|-+--.. ..+++++-+.|.|+++|||||++-++..++...+..+.
T Consensus 3 ~~~i~g~~lr~~a~~~LG~~ft~~v~~~~~h~lVt~GpY~~vRHP~Y~g~~~~~~~~~~ll~~~ 66 (94)
T PF04140_consen 3 GLFIAGQLLRYWAIRTLGRYFTHRVIIQPGHKLVTSGPYRYVRHPSYLGNIIWELGGQLLLFNA 66 (94)
T ss_dssp --HHHHHHHHHHHHHHHGGG--SS--EETT-----SSTTTTBSSHHHHH-HHHHHHHHHHHHT-
T ss_pred hhHHHHHHHHHHHHHHccccCcEEEEecCCCEEecccccccccCchHHHHHHHHHHHHHHHHhH
Confidence 34556666666666665433211 13567899999999999999999888888776665543
No 16
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.37 E-value=0.0011 Score=53.79 Aligned_cols=78 Identities=23% Similarity=0.256 Sum_probs=56.5
Q ss_pred CccccccCcCccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHHHHHHHHHH-----HHhcccCCCCcce
Q 029221 118 EKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYL-MGRSYATRAWY-----LSKFEDFPKHVKS 191 (197)
Q Consensus 118 ~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~~~~~~~~l-~~~a~~~~~wY-----~~~F~~yp~~r~~ 191 (197)
..++++-+.|.++|+|||-|.|=.+.+.|-.++-.+..+.+.+++++-+. ..|+. .++.| ++++.||.|+-+.
T Consensus 117 ~~~h~lv~~GvY~y~RHPsY~g~flw~~gtq~~L~npis~v~f~~V~w~ff~~Ri~-~EE~~Li~fFg~~Y~eY~kkV~s 195 (201)
T KOG2628|consen 117 VSDHKLVTSGVYAYVRHPSYVGFFLWAAGTQTMLCNPISLVAFLLVVWRFFADRIK-EEEKYLISFFGSSYVEYAKKVPS 195 (201)
T ss_pred ccCceeEeccchhheeCchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHhhHHHHHHHHhCCc
Confidence 45788999999999999999999999999988877777766555555443 34443 33333 3444577777555
Q ss_pred eeccc
Q 029221 192 IFPYI 196 (197)
Q Consensus 192 lIPfi 196 (197)
=|||+
T Consensus 196 GiPfi 200 (201)
T KOG2628|consen 196 GIPFI 200 (201)
T ss_pred CCCCC
Confidence 59986
No 17
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.34 E-value=0.0023 Score=50.65 Aligned_cols=84 Identities=21% Similarity=0.344 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCC---CccccccCcCccCcccccchhh-HHHHHHHHHHHhhHHH-HHHHHHHH
Q 029221 89 KFLGMILFLLGISGNFYHHNLLSKMRRNG---EKEYKIPTSGLFDKVVCPHYLF-EILGFWGIFFIAQTLY-AFCYAIGV 163 (197)
Q Consensus 89 ~~~g~~lf~~g~~~n~~~h~~L~~lR~~~---~~~y~iP~gglF~~vscPnY~~-Eil~w~g~~l~~~~~~-~~~~~~~~ 163 (197)
.++|+++++.++..-+.+-..|-+.-.-+ -.++++-+.|+|++++||||+- =+.+=+|..+.++.+. +.++...-
T Consensus 71 ~~~gl~~~l~s~~ll~~vi~~LG~iWttki~ilP~h~~v~sglfk~~kHPNYflnIipEligl~Ll~~A~~Ta~l~~p~y 150 (172)
T COG1755 71 SIIGLALLLFSQILLYWVIKSLGEIWTTKIMILPNHQIVRSGLFKTMKHPNYFLNIIPELIGLPLLCQAWYTALLFSPIY 150 (172)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhheeeEEEeCCceeeccccchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788888888888888877776654321 1357788899999999999999 7778889999988764 44444444
Q ss_pred HHHHHHHHH
Q 029221 164 TFYLMGRSY 172 (197)
Q Consensus 164 ~~~l~~~a~ 172 (197)
+.-+..|-+
T Consensus 151 a~~L~vRIr 159 (172)
T COG1755 151 ALLLYVRIR 159 (172)
T ss_pred HHHHhhhhh
Confidence 444455543
No 18
>PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase
Probab=90.71 E-value=2.9 Score=32.99 Aligned_cols=61 Identities=23% Similarity=0.190 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccC-----CCccccccCcCccCcccccchhhHHHHHHHHHHHh
Q 029221 90 FLGMILFLLGISGNFYHHNLLSKMRRN-----GEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIA 151 (197)
Q Consensus 90 ~~g~~lf~~g~~~n~~~h~~L~~lR~~-----~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~ 151 (197)
..+.+++.+|.+.|..+-.+|-.-+.= |... ..-+|.-|++.+.|-|-|+++..+|.++..
T Consensus 67 l~~~~L~aiGq~Lv~ss~~~LG~tGTYlGdyFGilm-~~VT~FPFnv~~nPmY~GStl~fLg~al~~ 132 (164)
T PLN02797 67 LYFWPLFAFGQFLNFRVYQLLGEAGTYYGVRFGKNI-PWVTEFPFGVIRDPQYVGSILSLLACLSWV 132 (164)
T ss_pred HHHHHHHHHhhHHHHHHHHHhCCceeeehhhhcccc-cccccCCCCCCCCcchhhHHHHHHHHHHHh
Confidence 578999999999999998776544321 1112 245899999999999999999999999876
No 19
>PF13789 DUF4181: Domain of unknown function (DUF4181)
Probab=58.84 E-value=32 Score=25.17 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=20.3
Q ss_pred cccccCcCccC--cccccchhhHHHHHHHHHHHh
Q 029221 120 EYKIPTSGLFD--KVVCPHYLFEILGFWGIFFIA 151 (197)
Q Consensus 120 ~y~iP~gglF~--~vscPnY~~Eil~w~g~~l~~ 151 (197)
+.++|+.++|+ ++..=|=.+|+.+-+.+.++.
T Consensus 13 kl~i~k~~~~~~~~vn~~h~~~e~~i~i~~ii~~ 46 (110)
T PF13789_consen 13 KLNIPKKKFFSYKHVNKLHKKGEWIIFIIFIILI 46 (110)
T ss_pred HcCCCCCcCCCCCchhHHHHHHHHHhhhhHHHHH
Confidence 56799888885 555555556666655554443
No 20
>PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins. NnrU is thought to be involved in the reduction of nitric oxide. The exact function of NnrU is unclear. It is thought however that NnrU and perhaps NnrT are required for expression of both nirK and nor [].
Probab=35.62 E-value=2.4e+02 Score=22.82 Aligned_cols=29 Identities=14% Similarity=0.112 Sum_probs=20.0
Q ss_pred ccCcccccchhhHHHHHHHHHHHh-hHHHHH
Q 029221 128 LFDKVVCPHYLFEILGFWGIFFIA-QTLYAF 157 (197)
Q Consensus 128 lF~~vscPnY~~Eil~w~g~~l~~-~~~~~~ 157 (197)
.++.+|||-+.+-. .|..--++. ++..++
T Consensus 96 i~r~~RHP~l~g~~-lWA~aHLl~nGd~~~~ 125 (191)
T PF07298_consen 96 IYRITRHPMLLGVL-LWALAHLLANGDLASL 125 (191)
T ss_pred HHHHhcCchHHHHH-HHHHHHhhhcCcHHHH
Confidence 89999999999955 466554444 344444
No 21
>COG4094 Predicted membrane protein [Function unknown]
Probab=35.61 E-value=50 Score=27.35 Aligned_cols=71 Identities=13% Similarity=0.153 Sum_probs=42.4
Q ss_pred cCcCccCcccccchhhHHHHHHHHHHHhhHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHhcccCCCCcceeecc
Q 029221 124 PTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAF-CY---AIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPY 195 (197)
Q Consensus 124 P~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~-~~---~~~~~~~l~~~a~~~~~wY~~~F~~yp~~r~~lIPf 195 (197)
-.|+.=+-.+||.-.|..++=+|=.+..++..++ ++ .++.+.-+...-++.++.|.+.| +-++.|+..+||
T Consensus 99 ~~g~Ii~itRHP~l~g~~iWalaHll~nGd~~Svllfggf~l~~~~~~~~~~rR~r~r~g~a~-~~~~~~ts~~pf 173 (219)
T COG4094 99 YEGRIIRITRHPQLLGVVIWALAHLLANGDTFSVLLFGGFLLWAVVGVWSGDRRARKRYGEAF-VAPVQVTSRIPF 173 (219)
T ss_pred cCCceEEEecCchhHHHHHHHHHHhhccCceeeHHHHHHHHHHHHHHhhhhhhhhhcccCcce-eeeeccccccch
Confidence 3477788899999999888777777766643332 22 23333222222223344555555 345678888887
No 22
>PF15584 Imm44: Immunity protein 44
Probab=33.62 E-value=18 Score=26.05 Aligned_cols=21 Identities=33% Similarity=0.937 Sum_probs=15.6
Q ss_pred ccccccCcCccC---------cccccchhh
Q 029221 119 KEYKIPTSGLFD---------KVVCPHYLF 139 (197)
Q Consensus 119 ~~y~iP~gglF~---------~vscPnY~~ 139 (197)
.+.+||-.|.|+ ++.|||||-
T Consensus 21 SG~~iP~~GIwEPv~~~~~K~~~gc~NYf~ 50 (94)
T PF15584_consen 21 SGQEIPCDGIWEPVDAPKPKLNVGCPNYFL 50 (94)
T ss_pred cCCCcccCCeEccccCCCCccccCcchhhc
Confidence 467788888885 467999974
No 23
>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2.7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane
Probab=33.03 E-value=58 Score=26.55 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHhcccC---CCcccccc-CcCccCcccccchh
Q 029221 96 FLLGISGNFYHHNLLSKMRRN---GEKEYKIP-TSGLFDKVVCPHYL 138 (197)
Q Consensus 96 f~~g~~~n~~~h~~L~~lR~~---~~~~y~iP-~gglF~~vscPnY~ 138 (197)
-++..+.+...|..-+.+||+ +|.+.-+| +||..|...||=..
T Consensus 202 ~~~~~i~~~~gdl~~S~~KR~~~iKD~g~lipghGg~lDr~d~~l~~ 248 (259)
T PF01148_consen 202 SLLASIVEAFGDLFESAIKRDAGIKDSGNLIPGHGGILDRFDSLLFA 248 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccccCcCCcccchHhHHHH
Confidence 344555666667665666554 34456688 89999998887443
No 24
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=31.12 E-value=3.4e+02 Score=23.46 Aligned_cols=17 Identities=24% Similarity=0.454 Sum_probs=14.1
Q ss_pred cchhhHHHHHHHHHHHh
Q 029221 135 PHYLFEILGFWGIFFIA 151 (197)
Q Consensus 135 PnY~~Eil~w~g~~l~~ 151 (197)
..|+-+-++|+|+.++.
T Consensus 45 ~~~l~~~~W~~G~~~~~ 61 (300)
T PF05653_consen 45 RSYLRRPLWWIGLLLMV 61 (300)
T ss_pred hHHHhhHHHHHHHHHHh
Confidence 47888999999997764
No 25
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.87 E-value=1.2e+02 Score=23.41 Aligned_cols=35 Identities=11% Similarity=0.110 Sum_probs=23.1
Q ss_pred chhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 029221 136 HYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATR 175 (197)
Q Consensus 136 nY~~Eil~w~g~~l~~~~~~~~~~~~~~~~~l~~~a~~~~ 175 (197)
|...|+.++.+++++.|-.. .+.++.++.++.+++
T Consensus 2 nwt~~~W~~a~igLvvGi~I-----G~li~Rlt~~~~k~q 36 (138)
T COG3105 2 NWTFMTWEYALIGLVVGIII-----GALIARLTNRKLKQQ 36 (138)
T ss_pred chhHHHHHHHHHHHHHHHHH-----HHHHHHHcchhhhhH
Confidence 56788888888888876433 334556666665443
No 26
>PF14990 DUF4516: Domain of unknown function (DUF4516)
Probab=24.59 E-value=1.8e+02 Score=18.27 Aligned_cols=29 Identities=7% Similarity=0.260 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--ccCCCC
Q 029221 160 AIGVTFYLMGRSYATRAWYLSKF--EDFPKH 188 (197)
Q Consensus 160 ~~~~~~~l~~~a~~~~~wY~~~F--~~yp~~ 188 (197)
+..++..|...|.--|+-||... ++++++
T Consensus 14 ~~~s~~sM~aGA~vVH~~ykPdltiP~i~~~ 44 (47)
T PF14990_consen 14 LVASLLSMLAGASVVHNIYKPDLTIPEIPPK 44 (47)
T ss_pred HHHHHHHHHhhhHHHHHHhCccCCCCCCCCC
Confidence 34455666777788899999766 567664
No 27
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=24.41 E-value=4.5e+02 Score=23.73 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=11.4
Q ss_pred HHHHHHhcccCCCccccccCcC
Q 029221 106 HHNLLSKMRRNGEKEYKIPTSG 127 (197)
Q Consensus 106 ~h~~L~~lR~~~~~~y~iP~gg 127 (197)
+...+|+-|++.++.+++|.|.
T Consensus 378 a~i~lr~~~~~~~rpf~~p~g~ 399 (474)
T TIGR03813 378 SAIYLRYSQPDRPRPYRIPGGL 399 (474)
T ss_pred HHHHHHhcCCCCCCCeEecCCc
Confidence 3444443333445567787654
No 28
>KOG3308 consensus Uncharacterized protein of the uridine kinase family [Nucleotide transport and metabolism]
Probab=23.22 E-value=44 Score=27.88 Aligned_cols=26 Identities=38% Similarity=0.705 Sum_probs=20.0
Q ss_pred CCCcccccc-CcCccCcccccchhhHH
Q 029221 116 NGEKEYKIP-TSGLFDKVVCPHYLFEI 141 (197)
Q Consensus 116 ~~~~~y~iP-~gglF~~vscPnY~~Ei 141 (197)
++.+.|.+| .+|+|+-+.=|||+-+-
T Consensus 145 r~~Rt~y~p~~tgyfd~~~~P~Y~~~~ 171 (225)
T KOG3308|consen 145 REARTYYPPDDTGYFDPVVWPHYEKNF 171 (225)
T ss_pred hcccccCCCCCCccccCccchHHHHHH
Confidence 344566666 78999999999998654
No 29
>PF01307 Plant_vir_prot: Plant viral movement protein; InterPro: IPR001896 This family of membrane/coat proteins are found in a number of different ssRNA plant virus families that include Potexvirus, Hordeivirus and Carlavirus.
Probab=21.44 E-value=1.3e+02 Score=21.96 Aligned_cols=16 Identities=19% Similarity=0.488 Sum_probs=13.7
Q ss_pred cCCCccccccCcCccC
Q 029221 115 RNGEKEYKIPTSGLFD 130 (197)
Q Consensus 115 ~~~~~~y~iP~gglF~ 130 (197)
.-||+.+.+|+||-++
T Consensus 34 hvGDniH~LPhGG~Yr 49 (104)
T PF01307_consen 34 HVGDNIHSLPHGGRYR 49 (104)
T ss_pred CCCCCCCCCCCCCccc
Confidence 3589999999999994
No 30
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.87 E-value=1.1e+02 Score=28.80 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=20.9
Q ss_pred CccccccCcCccCcccccchhhHHH
Q 029221 118 EKEYKIPTSGLFDKVVCPHYLFEIL 142 (197)
Q Consensus 118 ~~~y~iP~gglF~~vscPnY~~Eil 142 (197)
+.+.|.-+|+.|+.-++|--|.-.+
T Consensus 275 E~GWK~vHgDVFR~p~~~~Lfsa~l 299 (593)
T KOG1277|consen 275 EYGWKQVHGDVFRFPSHPLLFSAVL 299 (593)
T ss_pred cccceeeecccccCCCccHHHHHHh
Confidence 5678999999999999998776554
Done!