Your job contains 1 sequence.
>029233
MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN
SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS
WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP
TQIKTKKLFVTGIQWTQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029233
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088756 - symbol:AT3G20930 species:3702 "Arabi... 601 1.5e-58 1
TAIR|locus:2206639 - symbol:AT1G32580 "AT1G32580" species... 256 5.5e-22 1
TAIR|locus:2051003 - symbol:DAL1 "differentiation and gre... 252 1.5e-21 1
TAIR|locus:2063389 - symbol:MORF6 "multiple organellar RN... 238 4.4e-20 1
TAIR|locus:2200131 - symbol:MORF9 "multiple organellar RN... 199 6.0e-16 1
UNIPROTKB|Q2R8U1 - symbol:Os11g0216400 "Os11g0216400 prot... 166 8.4e-12 1
TAIR|locus:2083348 - symbol:MORF3 "multiple organellar RN... 152 6.4e-11 1
TAIR|locus:2086310 - symbol:RIP1 "RNA-editing factor inte... 154 2.0e-10 1
TAIR|locus:2030200 - symbol:AT1G72530 "AT1G72530" species... 130 1.1e-07 1
TAIR|locus:2119782 - symbol:MORF1 "multiple organellar RN... 123 1.5e-05 1
TAIR|locus:2156344 - symbol:MORF4 "AT5G44780" species:370... 118 0.00014 1
>TAIR|locus:2088756 [details] [associations]
symbol:AT3G20930 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HSSP:Q9V535 eggNOG:COG0724 EMBL:AY099828
EMBL:AY084565 EMBL:BT002195 IPI:IPI00537313 RefSeq:NP_566672.1
UniGene:At.43817 ProteinModelPortal:Q8L440 SMR:Q8L440 PRIDE:Q8L440
EnsemblPlants:AT3G20930.1 GeneID:821642 KEGG:ath:AT3G20930
TAIR:At3g20930 InParanoid:Q8L440 OMA:KAQMVDH PhylomeDB:Q8L440
ProtClustDB:CLSN2688611 ArrayExpress:Q8L440 Genevestigator:Q8L440
Uniprot:Q8L440
Length = 374
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 116/193 (60%), Positives = 146/193 (75%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWNSQ 62
IYDAS DTHFGFCC++DE+ SR+LA LPGV+++RP+ DY+S KK+Y S
Sbjct: 112 IYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGI---------GSH 162
Query: 63 IGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQ 122
G +L F GT KHW+VR+DKPGVG+VTKAQMVD Q+L+KVL NEKDAQMC+YHVSWQ
Sbjct: 163 KGVSL-FDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQ 221
Query: 123 SNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQ 182
S+FGFCC+LD+ A EL GVPGVL+V PD +F S NKDY G++ Q+S D SE+ P
Sbjct: 222 SDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSR-DQDDSESPP-- 278
Query: 183 IKTKKLFVTGIQW 195
+KTKKLF+TG+ +
Sbjct: 279 VKTKKLFITGLSF 291
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 44/92 (47%), Positives = 69/92 (75%)
Query: 71 LGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCE 130
L +W+V +DKP V +K+ MVD Y +IL KVLGNEKDAQ+ IY S+ ++FGFCC
Sbjct: 67 LTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCH 126
Query: 131 LDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
+D++ +++L +PGV+S++P++++ SE K+YG
Sbjct: 127 IDEDASRQLASLPGVVSIRPEQDYSSEKKNYG 158
Score = 143 (55.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
MC+Y S + FGFCC++DE ++ ELA +PGVL V PD + S+ KDY
Sbjct: 213 MCLYHVSWQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDY 260
>TAIR|locus:2206639 [details] [associations]
symbol:AT1G32580 "AT1G32580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 EMBL:AC055769
HOGENOM:HOG000272676 ProtClustDB:CLSN2682809 EMBL:AY063995
EMBL:AY096695 IPI:IPI00520554 PIR:D86451 RefSeq:NP_174536.1
UniGene:At.27111 IntAct:Q9C7Y2 STRING:Q9C7Y2 PaxDb:Q9C7Y2
PRIDE:Q9C7Y2 EnsemblPlants:AT1G32580.1 GeneID:840152
KEGG:ath:AT1G32580 TAIR:At1g32580 eggNOG:NOG251524 OMA:GENATKQ
PhylomeDB:Q9C7Y2 ArrayExpress:Q9C7Y2 Genevestigator:Q9C7Y2
Uniprot:Q9C7Y2
Length = 229
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 49/104 (47%), Positives = 67/104 (64%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L K++G+E++A+ IY+VS + FGF
Sbjct: 87 LFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGF 146
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL + PD ENKDYG N +
Sbjct: 147 GCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELFVNGEI 190
Score = 131 (51.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL + PD + KDY
Sbjct: 135 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDY 180
>TAIR|locus:2051003 [details] [associations]
symbol:DAL1 "differentiation and greening-like 1"
species:3702 "Arabidopsis thaliana" [GO:0003674
"molecular_function" evidence=ND] [GO:0002103 "endonucleolytic
cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA,
4.5S-rRNA, 5S-rRNA)" evidence=IMP] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0006399 "tRNA metabolic process" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009657 EMBL:AC002332
EMBL:AF446351 EMBL:AY097425 EMBL:AK228465 IPI:IPI00521047
PIR:D84745 PIR:T52623 RefSeq:NP_180901.1 UniGene:At.111
IntAct:O22793 STRING:O22793 PaxDb:O22793 PRIDE:O22793
EnsemblPlants:AT2G33430.1 GeneID:817907 KEGG:ath:AT2G33430
TAIR:At2g33430 eggNOG:NOG268944 HOGENOM:HOG000272676
InParanoid:O22793 OMA:YSRRREN PhylomeDB:O22793
ProtClustDB:CLSN2682809 ArrayExpress:O22793 Genevestigator:O22793
GO:GO:0002103 Uniprot:O22793
Length = 219
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + GF
Sbjct: 78 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGF 137
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 138 GCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 187
Score = 124 (48.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ + GF C +DEETS +L LPGVL V PD + KDY
Sbjct: 126 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
>TAIR|locus:2063389 [details] [associations]
symbol:MORF6 "multiple organellar RNA editing factor 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004667
HOGENOM:HOG000272676 ProtClustDB:CLSN2682809 EMBL:AY072439
EMBL:BT003414 IPI:IPI00523082 PIR:B84766 RefSeq:NP_181067.1
UniGene:At.37691 IntAct:O82169 PaxDb:O82169 PRIDE:O82169
EnsemblPlants:AT2G35240.1 GeneID:818091 KEGG:ath:AT2G35240
TAIR:At2g35240 eggNOG:NOG317940 OMA:SPTIFHA PhylomeDB:O82169
ArrayExpress:O82169 Genevestigator:O82169 Uniprot:O82169
Length = 232
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 49/106 (46%), Positives = 67/106 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ M+KPG K QM+D Y Q L K++G+E++A+ IY+VS + FGF
Sbjct: 90 LFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKIVGSEEEARKKIYNVSCERYFGF 149
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNS-MVP 172
CE+D+E + +L G+PGVL V PD E KDYG N +VP
Sbjct: 150 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAELFVNGEVVP 195
Score = 128 (50.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 138 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDY 183
>TAIR|locus:2200131 [details] [associations]
symbol:MORF9 "multiple organellar RNA editing factor 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:1900865
"chloroplast RNA modification" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006399 "tRNA metabolic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009658 "chloroplast organization"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] EMBL:CP002684
GO:GO:0009570 GO:GO:0009941 EMBL:AC011661 GO:GO:1900865
EMBL:BT005071 EMBL:AK117508 IPI:IPI00532519 RefSeq:NP_172610.1
UniGene:At.42133 IntAct:Q9LPZ1 STRING:Q9LPZ1 PRIDE:Q9LPZ1
ProMEX:Q9LPZ1 EnsemblPlants:AT1G11430.1 GeneID:837685
KEGG:ath:AT1G11430 TAIR:At1g11430 InParanoid:Q9LPZ1 OMA:NEQRETI
PhylomeDB:Q9LPZ1 ProtClustDB:CLSN2681966 ArrayExpress:Q9LPZ1
Genevestigator:Q9LPZ1 Uniprot:Q9LPZ1
Length = 232
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 50/146 (34%), Positives = 75/146 (51%)
Query: 43 SVKKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQIL 102
+V DYS + SN N Q T++ P HWL+ M+ P ++ QM+D Y L
Sbjct: 61 TVDSDYSS---KRSNS-NEQ-RETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTL 115
Query: 103 TKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
VLG+ ++A+ +Y S + GF C +D+E +++ G+PGVL V PD +NKDYG
Sbjct: 116 ATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYG 175
Query: 163 GNNLQNS-MVPSDSSEASPTQIKTKK 187
G+ N ++P P Q K
Sbjct: 176 GDKYINGEIIPCTYPTYQPKQRNNTK 201
Score = 106 (42.4 bits), Expect = 0.00060, P = 0.00060
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVK-KDY 48
+Y S T+ GF C +DEETS + LPGVL V PD Y VK KDY
Sbjct: 129 MYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPD-SYIDVKNKDY 174
>UNIPROTKB|Q2R8U1 [details] [associations]
symbol:Os11g0216400 "Os11g0216400 protein" species:39947
"Oryza sativa Japonica Group" [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] EMBL:DP000010 EMBL:AP008217
GO:GO:0004252 eggNOG:NOG12793 EMBL:CM000148 RefSeq:NP_001067510.1
UniGene:Os.39944 STRING:Q2R8U1 EnsemblPlants:LOC_Os11g11020.1
GeneID:4350082 KEGG:osa:4350082 OMA:LITMEFP ProtClustDB:CLSN2698490
Uniprot:Q2R8U1
Length = 374
Score = 166 (63.5 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 33/105 (31%), Positives = 60/105 (57%)
Query: 67 LLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFG 126
+LF HWL+ M+ P T+ +M++ Y Q L KV+G+ ++A+ +Y S + G
Sbjct: 84 ILFEGCDYNHWLITMEFPDPKP-TREEMIETYLQTLAKVVGSYEEAKKRMYAFSTTTYVG 142
Query: 127 FCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
F + +E +++ G+PGV+ + PD E K+YGG+ +N ++
Sbjct: 143 FQAVMTEEMSEKFRGLPGVVFILPDSYLYPETKEYGGDKYENGVI 187
>TAIR|locus:2083348 [details] [associations]
symbol:MORF3 "multiple organellar RNA editing factor 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0050897
"cobalt ion binding" evidence=IDA] [GO:1900864 "mitochondrial RNA
modification" evidence=IMP] GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0050897 EMBL:AC023912
HOGENOM:HOG000272676 GO:GO:1900864 UniGene:At.18838
UniGene:At.74889 IPI:IPI00530723 RefSeq:NP_187335.1 STRING:Q9M7Y5
PRIDE:Q9M7Y5 EnsemblPlants:AT3G06790.1 GeneID:819864
KEGG:ath:AT3G06790 TAIR:At3g06790 InParanoid:Q9M7Y5
ProtClustDB:CLSN2684671 Genevestigator:Q9M7Y5 Uniprot:Q9M7Y5
Length = 244
Score = 152 (58.6 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 44/156 (28%), Positives = 78/156 (50%)
Query: 18 VDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHW 77
+++ +S + P ++ RP + YS L+ N N T+L +HW
Sbjct: 42 IEKVSSSRTSLGPCYISTRPKTSGSG----YSPLNDPSPNWSNRPPKETILLDGCDYEHW 97
Query: 78 LVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQ 137
L+ M+ T+ +M++ Y + LT VLG +++A+ IY V + GF + +E +
Sbjct: 98 LIVMEFTDPKP-TEEEMINSYVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSC 156
Query: 138 ELTGVPGVLSVQPDENFGSENKDYGGN-NLQNSMVP 172
++ +PGVL V PD NKDYGG+ ++ ++P
Sbjct: 157 KVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIP 192
>TAIR|locus:2086310 [details] [associations]
symbol:RIP1 "RNA-editing factor interacting protein 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0050897 "cobalt ion
binding" evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0016554 "cytidine to uridine editing" evidence=IMP] [GO:0080156
"mitochondrial mRNA modification" evidence=IMP] GO:GO:0005739
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016554
GO:GO:0050897 EMBL:AP000370 GO:GO:0080156 EMBL:AF428427
IPI:IPI00532410 RefSeq:NP_566496.1 UniGene:At.24349
UniGene:At.67750 IntAct:Q9LKA5 STRING:Q9LKA5 PaxDb:Q9LKA5
PRIDE:Q9LKA5 EnsemblPlants:AT3G15000.1 GeneID:820729
KEGG:ath:AT3G15000 GeneFarm:775 TAIR:At3g15000 eggNOG:NOG243672
HOGENOM:HOG000243016 InParanoid:Q9LKA5 OMA:GAPPQNN PhylomeDB:Q9LKA5
ProtClustDB:CLSN2915005 Genevestigator:Q9LKA5 GermOnline:AT3G15000
Uniprot:Q9LKA5
Length = 395
Score = 154 (59.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 57 NP-W-NSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQM 114
NP W N T+L +HWLV ++ P G T+ +++D Y + L +++G+E +A+M
Sbjct: 78 NPNWSNRPPKETILLDGCDFEHWLVVVEPPQ-GEPTRDEIIDSYIKTLAQIVGSEDEARM 136
Query: 115 CIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNN-LQNSMVPS 173
IY VS + + F + ++ + +L + V V PD NKDYGG + VP
Sbjct: 137 KIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPY 196
Query: 174 D 174
D
Sbjct: 197 D 197
>TAIR|locus:2030200 [details] [associations]
symbol:AT1G72530 "AT1G72530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00938919 RefSeq:NP_001154468.1
UniGene:At.50962 EnsemblPlants:AT1G72530.2 GeneID:843585
KEGG:ath:AT1G72530 OMA:YDEKYHA ArrayExpress:F4IDD2 Uniprot:F4IDD2
Length = 192
Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 59 WNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYH 118
W+ I L KHWLV M KP G T+ +V + + L LG+E++A+ IY
Sbjct: 39 WSELIRVPSLVEGCDYKHWLVLM-KPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYS 97
Query: 119 VSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
VS + + F C + + ++ +P V V PD + YG
Sbjct: 98 VSTKYYYAFGCRIHEPLTYKIRSLPDVKWVLPDSFIVDGDNRYG 141
>TAIR|locus:2119782 [details] [associations]
symbol:MORF1 "multiple organellar RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:1900864 "mitochondrial RNA modification"
evidence=IMP] [GO:1900865 "chloroplast RNA modification"
evidence=IMP] GO:GO:0005739 GO:GO:0009507 EMBL:CP002687
EMBL:AL021637 EMBL:AL161552 HOGENOM:HOG000243016 EMBL:BT002761
IPI:IPI00534157 PIR:T04886 RefSeq:NP_193735.1 UniGene:At.32756
STRING:O49429 PaxDb:O49429 PRIDE:O49429 EnsemblPlants:AT4G20020.1
GeneID:827747 KEGG:ath:AT4G20020 TAIR:At4g20020 eggNOG:NOG285776
InParanoid:O49429 OMA:HWLITMD PhylomeDB:O49429
ProtClustDB:CLSN2685724 Genevestigator:O49429 GO:GO:1900865
GO:GO:1900864 Uniprot:O49429
Length = 419
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 66 TLLFPLGTTKHWLVRMD-KPGVGVVTKAQMVDRYAQILTKVLG-NEKDAQMCIYHVSWQS 123
T+LF HWL+ MD + +MV Y + + LG + ++A+ +Y S +
Sbjct: 79 TVLFEGCDYNHWLITMDFSKEETPKSPEEMVAAYEETCAQGLGISVEEAKQRMYACSTTT 138
Query: 124 NFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV-----PSDSSEA 178
GF + ++ +++ +PGV+ + PD +NK+YGG+ +N ++ P S A
Sbjct: 139 YQGFQAIMTEQESEKFKDLPGVVFILPDSYIDPQNKEYGGDKYENGVITHRPPPIQSGRA 198
Query: 179 SP 180
P
Sbjct: 199 RP 200
>TAIR|locus:2156344 [details] [associations]
symbol:MORF4 "AT5G44780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048481 "ovule development" evidence=RCA]
EMBL:CP002688 GenomeReviews:BA000015_GR eggNOG:NOG12793
EMBL:AB016874 EMBL:AC002342 HOGENOM:HOG000243016 EMBL:BT012578
EMBL:AK221549 IPI:IPI00548630 RefSeq:NP_199291.1 UniGene:At.30053
PaxDb:O48582 PRIDE:O48582 EnsemblPlants:AT5G44780.1 GeneID:834507
KEGG:ath:AT5G44780 TAIR:At5g44780 InParanoid:O48582 OMA:RMSIPGQ
PhylomeDB:O48582 ProtClustDB:CLSN2916734 Genevestigator:O48582
Uniprot:O48582
Length = 723
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 31/115 (26%), Positives = 55/115 (47%)
Query: 76 HWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG-NEKDAQMCIYHVSWQSNFGFCCELDDE 134
HWL+ M+ P + ++ +M+ + Q K L + ++A+ IY + S GF +
Sbjct: 84 HWLITMNFPKDNLPSREEMISIFEQTCAKGLAISLEEAKKKIYAICTTSYQGFQATMTIG 143
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTKKLF 189
++ +PGV + PD ENK YGG+ +N ++ P + TK+ F
Sbjct: 144 EVEKFRDLPGVQYIIPDSYIDVENKVYGGDKYENGVITP-----GPVPVPTKEGF 193
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.49 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 605 (64 KB)
Total size of DFA: 199 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.55u 0.12s 19.67t Elapsed: 00:00:01
Total cpu time: 19.55u 0.12s 19.67t Elapsed: 00:00:01
Start: Fri May 10 11:32:56 2013 End: Fri May 10 11:32:57 2013