BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029233
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38732|DAG_ANTMA DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1
Length = 230
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 78 TIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 137
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C + +E +++ G+PGVL V PD +NKDYGG+ N ++P P Q +
Sbjct: 138 GFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSR 197
Query: 185 TKK 187
+ K
Sbjct: 198 SSK 200
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C V EETS + LPGVL V PD + KDY
Sbjct: 128 MYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDY 173
>sp|Q9LKA5|UMP1_ARATH Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis
thaliana GN=At3g15000 PE=1 SV=1
Length = 395
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWLV ++ P G T+ +++D Y + L +++G+E +A+M IY VS + + F + ++
Sbjct: 98 EHWLVVVEPP-QGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSED 156
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGG 163
+ +L + V V PD NKDYGG
Sbjct: 157 LSHKLKELSNVRWVLPDSYLDVRNKDYGG 185
>sp|O53771|Y0574_MYCTU Uncharacterized protein Rv0574c/MT0602 OS=Mycobacterium
tuberculosis GN=Rv0574c PE=2 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 63 IGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQ 122
+G+ G + W R D+PGV ++ D + +VL +++ + I + W
Sbjct: 176 VGSVAAESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWG 235
Query: 123 SNFGFCCELDD 133
SN+G+ D
Sbjct: 236 SNWGYATAPGD 246
>sp|P42387|TRPE_BUCAP Anthranilate synthase component 1 OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=trpE PE=3 SV=1
Length = 515
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 78 LVRMDKPGVGVVTKAQMVDRYAQIL---TKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
L R+ KPG V+ VDRY+ ++ ++V+G ++ ++ + N G
Sbjct: 373 LARICKPGSRYVSDLVRVDRYSHVMHLVSRVIGELREGLDALHAYASCMNMG-------- 424
Query: 135 CAQELTGVPGVLSVQ-PDENFGSENKDYGG 163
LTG P V ++Q E+ G + YGG
Sbjct: 425 ---TLTGAPKVRAMQLIAEHEGEKRGSYGG 451
>sp|Q44689|TRPE_BUCRM Anthranilate synthase component 1 OS=Buchnera aphidicola subsp.
Rhopalosiphum maidis GN=trpE PE=3 SV=1
Length = 514
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 78 LVRMDKPGVGVVTKAQMVDRYAQIL---TKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
L R+ KPG V+ VD+Y+ ++ +KV+G K+ ++ + N G
Sbjct: 373 LARICKPGSRYVSDLVKVDKYSHVMHLVSKVIGELKEGLDALHAYASCMNMG-------- 424
Query: 135 CAQELTGVPGVLSVQPDENFGSENK-DYGG 163
LTG P V ++Q + E + YGG
Sbjct: 425 ---TLTGAPKVRAMQLIAEYEKEKRGSYGG 451
>sp|Q44691|TRPE_BUCRP Anthranilate synthase component 1 OS=Buchnera aphidicola subsp.
Rhopalosiphum padi GN=trpE PE=3 SV=1
Length = 514
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQIL---TKVLGNEKDAQMCIYHVSWQSN 124
L + ++ L R+ KPG V+ VDRY+ ++ ++V+G ++ ++ + N
Sbjct: 362 LMLVDLARNDLARICKPGSRYVSDLVRVDRYSHVMHLVSRVIGELREGLDALHAYASCMN 421
Query: 125 FGFCCELDDECAQELTGVPGVLSVQPDENFGSENK-DYGG 163
G LTG P V ++Q + E + YGG
Sbjct: 422 MG-----------TLTGAPKVCAMQLIAEYEKEKRGSYGG 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,472,952
Number of Sequences: 539616
Number of extensions: 3213639
Number of successful extensions: 6773
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6766
Number of HSP's gapped (non-prelim): 11
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)