BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029240
(196 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|D Chain D, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|I Chain I, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|J Chain J, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
Length = 240
Score = 312 bits (799), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 150/196 (76%), Positives = 174/196 (88%), Gaps = 1/196 (0%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
+G+ +RE+ VY+AKLAEQAERYEEMV++M+ V + ELTVEERNLLSVAYKNVIG+
Sbjct: 3 LGSMSREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGA 61
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RA+WRI+SSIEQKEEGR NEEHV+L+K+YR K+E+ELS +C ILKLLDSHLVPS+TA
Sbjct: 62 RRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAA 121
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ESKVFYLKMKGDY+RYLAEFK G ERK AAE+TM++YKAAQDIAL DLAPTHPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLAL 181
Query: 181 NFSVFYYEILNSSEKA 196
NFSVFYYEILNS +KA
Sbjct: 182 NFSVFYYEILNSPDKA 197
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A
PYRAZOLE Derivative
Length = 243
Score = 301 bits (771), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/196 (73%), Positives = 168/196 (85%), Gaps = 1/196 (0%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
M TRE+ VY+AKLAEQAERYEEMV+FM+ V + ELTVEERNLLSVAYKNVIG+
Sbjct: 6 MAESTREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDVEELTVEERNLLSVAYKNVIGA 64
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RA+WRIISSIEQKEE R NE+HVS +K+YR K+E+ELS +C IL LL+SHL+P A+
Sbjct: 65 RRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTA 124
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ESKVFYLKMKGDY+RYLAEFK G ERK AAENT+L+YK+AQDIAL +LAPTHPIRLGLAL
Sbjct: 125 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLAL 184
Query: 181 NFSVFYYEILNSSEKA 196
NFSVFYYEILNSS++A
Sbjct: 185 NFSVFYYEILNSSDRA 200
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex
pdb|2O98|B Chain B, Structure Of The 14-3-3 H+-Atpase Plant Complex
Length = 242
Score = 298 bits (762), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 172/194 (88%), Gaps = 2/194 (1%)
Query: 4 PT-REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
PT RE+ VY+AKLAEQAERYEEMV+FM+ V++S + ELTVEERNLLSVAYKNVIG+ R
Sbjct: 5 PTAREENVYMAKLAEQAERYEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARR 63
Query: 63 AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
A+WRIISSIEQKEE R NEEHV+ +++YRSK+E+ELS +C ILKLLD+ L+PSA +G+S
Sbjct: 64 ASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDS 123
Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
KVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA T+LAPTHPIRLGLALNF
Sbjct: 124 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNF 183
Query: 183 SVFYYEILNSSEKA 196
SVFYYEILNS ++A
Sbjct: 184 SVFYYEILNSPDRA 197
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|1O9D|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|1O9E|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|1O9F|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|3E6Y|A Chain A, Structure Of 14-3-3 In Complex With The
Differentiation-Inducing Agent Cotylenin A
pdb|3E6Y|B Chain B, Structure Of 14-3-3 In Complex With The
Differentiation-Inducing Agent Cotylenin A
Length = 260
Score = 297 bits (761), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 172/194 (88%), Gaps = 2/194 (1%)
Query: 4 PT-REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
PT RE+ VY+AKLAEQAERYEEMV+FM+ V++S + ELTVEERNLLSVAYKNVIG+ R
Sbjct: 5 PTAREENVYMAKLAEQAERYEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARR 63
Query: 63 AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
A+WRIISSIEQKEE R NEEHV+ +++YRSK+E+ELS +C ILKLLD+ L+PSA +G+S
Sbjct: 64 ASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDS 123
Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
KVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA T+LAPTHPIRLGLALNF
Sbjct: 124 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNF 183
Query: 183 SVFYYEILNSSEKA 196
SVFYYEILNS ++A
Sbjct: 184 SVFYYEILNSPDRA 197
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY
EPIBESTAT
pdb|3M51|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY
PYRROLIDO
Length = 240
Score = 297 bits (761), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 172/194 (88%), Gaps = 2/194 (1%)
Query: 4 PT-REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
PT RE+ VY+AKLAEQAERYEEMV+FM+ V++S + ELTVEERNLLSVAYKNVIG+ R
Sbjct: 5 PTAREENVYMAKLAEQAERYEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARR 63
Query: 63 AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
A+WRIISSIEQKEE R NEEHV+ +++YRSK+E+ELS +C ILKLLD+ L+PSA +G+S
Sbjct: 64 ASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDS 123
Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
KVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA T+LAPTHPIRLGLALNF
Sbjct: 124 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNF 183
Query: 183 SVFYYEILNSSEKA 196
SVFYYEILNS ++A
Sbjct: 184 SVFYYEILNSPDRA 197
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide
Length = 234
Score = 262 bits (670), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 154/191 (80%), Gaps = 3/191 (1%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
RE VY AKLAEQAERY+EMV+ M + ELTVEERNLLSVAYKNVIG+ RA+W
Sbjct: 5 REDLVYQAKLAEQAERYDEMVESMKKVAGMDV---ELTVEERNLLSVAYKNVIGARRASW 61
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
RIISSIEQKEE + E+ + ++++YR VE+EL +C IL +LD HL+P+A GESKVF
Sbjct: 62 RIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVF 121
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
Y KMKGDY+RYLAEF G++RK AAEN++++YKAA DIA+T+L PTHPIRLGLALNFSVF
Sbjct: 122 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVF 181
Query: 186 YYEILNSSEKA 196
YYEILNS ++A
Sbjct: 182 YYEILNSPDRA 192
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide
Length = 232
Score = 262 bits (669), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 154/191 (80%), Gaps = 3/191 (1%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
RE VY AKLAEQAERY+EMV+ M + ELTVEERNLLSVAYKNVIG+ RA+W
Sbjct: 4 REDLVYQAKLAEQAERYDEMVESMKKVAGMDV---ELTVEERNLLSVAYKNVIGARRASW 60
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
RIISSIEQKEE + E+ + ++++YR VE+EL +C IL +LD HL+P+A GESKVF
Sbjct: 61 RIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVF 120
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
Y KMKGDY+RYLAEF G++RK AAEN++++YKAA DIA+T+L PTHPIRLGLALNFSVF
Sbjct: 121 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVF 180
Query: 186 YYEILNSSEKA 196
YYEILNS ++A
Sbjct: 181 YYEILNSPDRA 191
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide
And A Small Fragment Hit From A Fbdd Screen
Length = 261
Score = 262 bits (669), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 157/197 (79%), Gaps = 4/197 (2%)
Query: 1 MGT-PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG 59
MG+ RE VY AKLAEQAERY+EMV+ M + ELTVEERNLLSVAYKNVIG
Sbjct: 25 MGSMDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDV---ELTVEERNLLSVAYKNVIG 81
Query: 60 SLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATA 119
+ RA+WRIISSIEQKEE + E+ + ++++YR VE+EL +C IL +LD HL+P+A
Sbjct: 82 ARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICXDILDVLDKHLIPAANT 141
Query: 120 GESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLA 179
GESKVFY KMKGDY+RYLAEF G++RK AAEN++++YKAA DIA+T+L PTHPIRLGLA
Sbjct: 142 GESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLA 201
Query: 180 LNFSVFYYEILNSSEKA 196
LNFSVFYYEILNS ++A
Sbjct: 202 LNFSVFYYEILNSPDRA 218
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein
In Complex With Peptide
pdb|2NPM|B Chain B, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein
In Complex With Peptide
Length = 260
Score = 248 bits (633), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
RE VY+AKLAEQAERY+EM K+M +V + + ELTVEERNLLSVAYKN +GS R++W
Sbjct: 28 RESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSW 87
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
RIISS+EQKE R E+ + YRSKVE+EL+D+C IL +LD HL+P+AT+ +SKVF
Sbjct: 88 RIISSVEQKEHSRNAEDASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVF 147
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
Y KMKGDY+RY++EF GD ++++AE+ + +YK A +A DL PTHPIRLGLALNFSVF
Sbjct: 148 YFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVF 206
Query: 186 YYEILN 191
+YEILN
Sbjct: 207 HYEILN 212
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide
pdb|3P1S|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin A
pdb|3SPR|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fc-Thf
pdb|3SMK|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Cotylenin A
Length = 236
Score = 227 bits (579), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+VEERNLLSVAYKNV+G
Sbjct: 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSVEERNLLSVAYKNVVGG 59
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 60 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 119
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PTHPIRLGLAL
Sbjct: 120 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTHPIRLGLAL 179
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 180 NFSVFHYEIANSPEEA 195
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J
Aglycone
Length = 235
Score = 227 bits (579), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+VEERNLLSVAYKNV+G
Sbjct: 2 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSVEERNLLSVAYKNVVGG 58
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 59 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 118
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PTHPIRLGLAL
Sbjct: 119 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTHPIRLGLAL 178
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 179 NFSVFHYEIANSPEEA 194
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated
C-Raf Peptide
pdb|4FJ3|B Chain B, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated
C-Raf Peptide
Length = 235
Score = 227 bits (578), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 146/196 (74%), Gaps = 5/196 (2%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ + + V AKLAEQAERY++M M S+ + EL+ EERNLLSVAYKNV+G+
Sbjct: 3 MGSMDKNELVQKAKLAEQAERYDDMAACMKSV---TEQGAELSNEERNLLSVAYKNVVGA 59
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
R++WR++SSIEQK EG + ++ + ++YR K+E+EL D+C +L LL+ L+P+A+
Sbjct: 60 RRSSWRVVSSIEQKTEGAEKKQQ--MAREYREKIETELRDICNDVLSLLEKFLIPNASQA 117
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ESKVFYLKMKGDYYRYLAE GD++K + + +Y+ A +I+ ++ PTHPIRLGLAL
Sbjct: 118 ESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLAL 177
Query: 181 NFSVFYYEILNSSEKA 196
NFSVFYYEILNS EKA
Sbjct: 178 NFSVFYYEILNSPEKA 193
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
pdb|2V7D|B Chain B, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
pdb|2V7D|C Chain C, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
pdb|2V7D|D Chain D, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
Length = 247
Score = 224 bits (572), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 145/195 (74%), Gaps = 5/195 (2%)
Query: 2 GTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSL 61
G+ + + V AKLAEQAERY++M M S+ + EL+ EERNLLSVAYKNV+G+
Sbjct: 1 GSMDKNELVQKAKLAEQAERYDDMAACMKSV---TEQGAELSNEERNLLSVAYKNVVGAR 57
Query: 62 RAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGE 121
R++WR++SSIEQK EG + ++ + ++YR K+E+EL D+C +L LL+ L+P+A+ E
Sbjct: 58 RSSWRVVSSIEQKTEGAEKKQQ--MAREYREKIETELRDICNDVLSLLEKFLIPNASQAE 115
Query: 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALN 181
SKVFYLKMKGDYYRYLAE GD++K + + +Y+ A +I+ ++ PTHPIRLGLALN
Sbjct: 116 SKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALN 175
Query: 182 FSVFYYEILNSSEKA 196
FSVFYYEILNS EKA
Sbjct: 176 FSVFYYEILNSPEKA 190
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide
pdb|3P1Q|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin A
pdb|3SML|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin A
Aglycone
pdb|3SMM|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J
Aglycone
pdb|3SMN|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin
A-Thf
Length = 236
Score = 224 bits (572), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSNEERNLLSVAYKNVVGG 59
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 60 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 119
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PTHPIRLGLAL
Sbjct: 120 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTHPIRLGLAL 179
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 180 NFSVFHYEIANSPEEA 195
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human)
pdb|2BQ0|B Chain B, 14-3-3 Protein Beta (Human)
pdb|2C23|A Chain A, 14-3-3 Protein Beta (Human) In Complex With Exoenzyme S
Peptide
Length = 245
Score = 223 bits (569), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 145/194 (74%), Gaps = 5/194 (2%)
Query: 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
T + + V AKLAEQAERY++M M ++ + EL+ EERNLLSVAYKNV+G+ R
Sbjct: 2 TMDKSELVQKAKLAEQAERYDDMAAAMKAV---TEQGHELSNEERNLLSVAYKNVVGARR 58
Query: 63 AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
++WR+ISSIEQK E +NE+ + K+YR K+E+EL D+C +L+LLD +L+P+AT ES
Sbjct: 59 SSWRVISSIEQKTE--RNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPES 116
Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
KVFYLKMKGDY+RYL+E GD ++ N+ +Y+ A +I+ ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNF 176
Query: 183 SVFYYEILNSSEKA 196
SVFYYEILNS EKA
Sbjct: 177 SVFYYEILNSPEKA 190
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide
Length = 253
Score = 223 bits (568), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSXEERNLLSVAYKNVVGG 59
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 60 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 119
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 120 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 179
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 180 NFSVFHYEIANSPEEA 195
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein
Interactions From Virtual Screening
pdb|3T0M|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein
Interactions From Virtual Screening
Length = 235
Score = 223 bits (567), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 2 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSCEERNLLSVAYKNVVGG 58
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 59 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 118
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 119 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 178
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 179 NFSVFHYEIANSPEEA 194
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1
Peptide And A Stabilizing Small Molecule Fragment
Length = 239
Score = 223 bits (567), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 6 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSCEERNLLSVAYKNVVGG 62
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 63 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 122
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 123 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 182
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 183 NFSVFHYEIANSPEEA 198
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
pdb|2C1J|B Chain B, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
pdb|2C1N|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
pdb|2C1N|B Chain B, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
Length = 258
Score = 223 bits (567), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 5/191 (2%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
+ + V AKLAEQAERY++M M S+ + EL+ EERNLLSVAYKNV+G+ R++W
Sbjct: 16 KNELVQKAKLAEQAERYDDMAACMKSV---TEQGAELSNEERNLLSVAYKNVVGARRSSW 72
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
R++SSIEQK EG + ++ + ++YR K+E+EL D+C +L LL+ L+P+A+ ESKVF
Sbjct: 73 RVVSSIEQKTEGAEKKQQ--MAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVF 130
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
YLKMKGDYYRYLAE GD++K + + +Y+ A +I+ ++ PTHPIRLGLALNFSVF
Sbjct: 131 YLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 190
Query: 186 YYEILNSSEKA 196
YYEILNS EKA
Sbjct: 191 YYEILNSPEKA 201
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide
pdb|1A38|B Chain B, 14-3-3 Protein Zeta Bound To R18 Peptide
pdb|1A4O|A Chain A, 14-3-3 Protein Zeta Isoform
pdb|1A4O|B Chain B, 14-3-3 Protein Zeta Isoform
pdb|1A4O|C Chain C, 14-3-3 Protein Zeta Isoform
pdb|1A4O|D Chain D, 14-3-3 Protein Zeta Isoform
pdb|1A37|A Chain A, 14-3-3 Protein Zeta Bound To Ps-Raf259 Peptide
pdb|1A37|B Chain B, 14-3-3 Protein Zeta Bound To Ps-Raf259 Peptide
pdb|1QJA|A Chain A, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 2)
pdb|1QJA|B Chain B, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 2)
pdb|1QJB|A Chain A, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 1)
pdb|1QJB|B Chain B, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 1)
pdb|1IB1|A Chain A, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|1IB1|B Chain B, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|1IB1|C Chain C, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|1IB1|D Chain D, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|3CU8|A Chain A, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
pdb|3CU8|B Chain B, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
pdb|2WH0|A Chain A, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|2WH0|B Chain B, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|2WH0|C Chain C, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|2WH0|D Chain D, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|3NKX|A Chain A, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
pdb|3NKX|B Chain B, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
Length = 245
Score = 223 bits (567), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 5/191 (2%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
+ + V AKLAEQAERY++M M S+ + EL+ EERNLLSVAYKNV+G+ R++W
Sbjct: 3 KNELVQKAKLAEQAERYDDMAACMKSV---TEQGAELSNEERNLLSVAYKNVVGARRSSW 59
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
R++SSIEQK EG + ++ + ++YR K+E+EL D+C +L LL+ L+P+A+ ESKVF
Sbjct: 60 RVVSSIEQKTEGAEKKQQ--MAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVF 117
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
YLKMKGDYYRYLAE GD++K + + +Y+ A +I+ ++ PTHPIRLGLALNFSVF
Sbjct: 118 YLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 177
Query: 186 YYEILNSSEKA 196
YYEILNS EKA
Sbjct: 178 YYEILNSPEKA 188
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein
Interactions
Length = 236
Score = 223 bits (567), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSCEERNLLSVAYKNVVGG 59
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 60 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 119
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 120 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 179
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 180 NFSVFHYEIANSPEEA 195
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3
Binding Motif Ii
pdb|4DAU|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3
Binding Motif I
pdb|4HRU|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein
Interactions
Length = 234
Score = 222 bits (566), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 1 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSCEERNLLSVAYKNVVGG 57
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 58 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 117
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 118 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 177
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 178 NFSVFHYEIANSPEEA 193
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3
pdb|3RDH|B Chain B, X-Ray Induced Covalent Inhibition Of 14-3-3
pdb|3RDH|C Chain C, X-Ray Induced Covalent Inhibition Of 14-3-3
pdb|3RDH|D Chain D, X-Ray Induced Covalent Inhibition Of 14-3-3
Length = 248
Score = 222 bits (566), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 5/191 (2%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
+ + V AKLAEQAERY++M M S+ + EL+ EERNLLSVAYKNV+G+ R++W
Sbjct: 6 KNELVQKAKLAEQAERYDDMAACMKSV---TEQGAELSNEERNLLSVAYKNVVGARRSSW 62
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
R++SSIEQK EG + ++ + ++YR K+E+EL D+C +L LL+ L+P+A+ ESKVF
Sbjct: 63 RVVSSIEQKTEGAEKKQQ--MAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVF 120
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
YLKMKGDYYRYLAE GD++K + + +Y+ A +I+ ++ PTHPIRLGLALNFSVF
Sbjct: 121 YLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 180
Query: 186 YYEILNSSEKA 196
YYEILNS EKA
Sbjct: 181 YYEILNSPEKA 191
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3
And Exoenzyme S: From Structure To Pathogenesis
pdb|2O02|B Chain B, Phosphorylation Independent Interactions Between 14-3-3
And Exoenzyme S: From Structure To Pathogenesis
Length = 230
Score = 222 bits (566), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 5/191 (2%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
+ + V AKLAEQAERY++M M S+ + EL+ EERNLLSVAYKNV+G+ R++W
Sbjct: 3 KNELVQKAKLAEQAERYDDMAACMKSV---TEQGAELSNEERNLLSVAYKNVVGARRSSW 59
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
R++SSIEQK EG + ++ + ++YR K+E+EL D+C +L LL+ L+P+A+ ESKVF
Sbjct: 60 RVVSSIEQKTEGAEKKQQ--MAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVF 117
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
YLKMKGDYYRYLAE GD++K + + +Y+ A +I+ ++ PTHPIRLGLALNFSVF
Sbjct: 118 YLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 177
Query: 186 YYEILNSSEKA 196
YYEILNS EKA
Sbjct: 178 YYEILNSPEKA 188
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Raf1 Peptide (10mer)
pdb|3IQU|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Raf1 Peptide (6mer)
pdb|3IQV|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Raf1 Peptide (6mer) And Stabilisator Fusicoccin
pdb|3MHR|A Chain A, 14-3-3 Sigma In Complex With Yap Ps127-Peptide
Length = 236
Score = 222 bits (566), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 3 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSXEERNLLSVAYKNVVGG 59
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 60 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 119
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 120 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 179
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 180 NFSVFHYEIANSPEEA 195
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Task-3 Peptide
pdb|3P1O|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Task-3 Peptide And Stabilisator Fusicoccin A
pdb|3UX0|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Task-3 Peptide And Stabilizer Fusicoccin H
Length = 235
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 2 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSXEERNLLSVAYKNVVGG 58
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 59 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 118
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 119 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 178
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 179 NFSVFHYEIANSPEEA 194
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide
pdb|2BTP|B Chain B, 14-3-3 Protein Theta (Human) Complexed To Peptide
Length = 256
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 5/184 (2%)
Query: 13 AKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIE 72
AKLAEQAERY++M M ++ + EL+ EERNLLSVAYKNV+G R+AWR+ISSIE
Sbjct: 32 AKLAEQAERYDDMATCMKAV---TEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIE 88
Query: 73 QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGD 132
QK + +++ + L+KDYR KVESEL +C ++L+LLD +L+ +AT ESKVFYLKMKGD
Sbjct: 89 QKTD--TSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGD 146
Query: 133 YYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNS 192
Y+RYLAE GD+RK +N+ +Y+ A DI+ ++ PTHPIRLGLALNFSVFYYEILN+
Sbjct: 147 YFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNN 206
Query: 193 SEKA 196
E A
Sbjct: 207 PELA 210
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To
14-3-3 Proteins
Length = 235
Score = 220 bits (560), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 138/196 (70%), Gaps = 3/196 (1%)
Query: 1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
MG+ R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G
Sbjct: 2 MGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSXEERNLLSVAYKNVVGG 58
Query: 61 LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
RAAWR++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A
Sbjct: 59 QRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA 118
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
ES+VFYL MKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLAL
Sbjct: 119 ESRVFYLXMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 178
Query: 181 NFSVFYYEILNSSEKA 196
NFSVF+YEI NS E+A
Sbjct: 179 NFSVFHYEIANSPEEA 194
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In
Complex With A Mode-1 Phosphopeptide
pdb|1YWT|B Chain B, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In
Complex With A Mode-1 Phosphopeptide
pdb|1YZ5|A Chain A, The Crystal Structure Of 14-3-3-Sigma At 2.8 Angstrom
Resolution
pdb|1YZ5|B Chain B, The Crystal Structure Of 14-3-3-Sigma At 2.8 Angstrom
Resolution
Length = 248
Score = 219 bits (558), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 136/191 (71%), Gaps = 3/191 (1%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
R + AKLAEQAERYE+M FM V EL+ EERNLLSVAYKNV+G RAAW
Sbjct: 3 RASLIQKAKLAEQAERYEDMAAFMKGAVEK---GEELSCEERNLLSVAYKNVVGGQRAAW 59
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
R++SSIEQK +EE V++YR KVE+EL VC ++L LLDSHL+ A ES+VF
Sbjct: 60 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVF 119
Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
YLKMKGDYYRYLAE GD++K ++ +Y+ A DI+ ++ PT+PIRLGLALNFSVF
Sbjct: 120 YLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVF 179
Query: 186 YYEILNSSEKA 196
+YEI NS E+A
Sbjct: 180 HYEIANSPEEA 190
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta
Length = 245
Score = 218 bits (555), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 144/194 (74%), Gaps = 5/194 (2%)
Query: 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
T + + V AKLAEQAERY++M M ++ + EL+ EERNLLSVAYKNV+G+ R
Sbjct: 2 TMDKSELVQKAKLAEQAERYDDMAAAMKAV---TEQGHELSNEERNLLSVAYKNVVGARR 58
Query: 63 AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
++WR+ISSIEQK E +NE+ + K+YR K+E+EL D+C +L+LLD +L+ +AT ES
Sbjct: 59 SSWRVISSIEQKTE--RNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLILNATQAES 116
Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
KVFYLKMKGDY+RYL+E G+ ++ N+ +Y+ A +I+ ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYFRYLSEVASGENKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNF 176
Query: 183 SVFYYEILNSSEKA 196
SVFYYEILNS EKA
Sbjct: 177 SVFYYEILNSPEKA 190
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN
5- Monooxygenase Activation Protein, Beta Polypeptide
(Ywhab) From Homo Sapiens At 2.20 A Resolution.
pdb|4DNK|B Chain B, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN
5- Monooxygenase Activation Protein, Beta Polypeptide
(Ywhab) From Homo Sapiens At 2.20 A Resolution
Length = 247
Score = 213 bits (541), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 140/194 (72%), Gaps = 5/194 (2%)
Query: 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
T + + V AKLAEQAERY++ ++ + EL+ EERNLLSVAYKNV+G+ R
Sbjct: 3 TXDKSELVQKAKLAEQAERYDDXAAAXKAV---TEQGHELSNEERNLLSVAYKNVVGARR 59
Query: 63 AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
++WR+ISSIEQK E +NE+ K+YR K+E+EL D+C +L+LLD +L+P+AT ES
Sbjct: 60 SSWRVISSIEQKTE--RNEKKQQXGKEYREKIEAELQDICNDVLELLDKYLIPNATQPES 117
Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
KVFYLK KGDY+RYL+E GD ++ N+ +Y+ A +I+ + PTHPIRLGLALNF
Sbjct: 118 KVFYLKXKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEXQPTHPIRLGLALNF 177
Query: 183 SVFYYEILNSSEKA 196
SVFYYEILNS EKA
Sbjct: 178 SVFYYEILNSPEKA 191
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma
Length = 248
Score = 209 bits (533), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 138/193 (71%), Gaps = 5/193 (2%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
REQ V A+LAEQAERY++M M ++ + P L+ EERNLLSVAYKNV+G+ R++W
Sbjct: 4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEP---LSNEERNLLSVAYKNVVGARRSSW 60
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVP--SATAGESK 123
R+ISSIEQK NE+ + +V+ YR K+E EL VC +L LLD++L+ S T ESK
Sbjct: 61 RVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESK 120
Query: 124 VFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFS 183
VFYLKMKGDYYRYLAE G++R E++ +Y A +I+ + PTHPIRLGLALN+S
Sbjct: 121 VFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYS 180
Query: 184 VFYYEILNSSEKA 196
VFYYEI N+ E+A
Sbjct: 181 VFYYEIQNAPEQA 193
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|B Chain B, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|C Chain C, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|D Chain D, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|E Chain E, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|F Chain F, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
Length = 246
Score = 209 bits (532), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 138/193 (71%), Gaps = 5/193 (2%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
REQ V A+LAEQAERY++M M ++ + P L+ EERNLLSVAYKNV+G+ R++W
Sbjct: 3 REQLVQKARLAEQAERYDDMAAAMKNVTELNEP---LSNEERNLLSVAYKNVVGARRSSW 59
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVP--SATAGESK 123
R+ISSIEQK NE+ + +V+ YR K+E EL VC +L LLD++L+ S T ESK
Sbjct: 60 RVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESK 119
Query: 124 VFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFS 183
VFYLKMKGDYYRYLAE G++R E++ +Y A +I+ + PTHPIRLGLALN+S
Sbjct: 120 VFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYS 179
Query: 184 VFYYEILNSSEKA 196
VFYYEI N+ E+A
Sbjct: 180 VFYYEIQNAPEQA 192
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C63|B Chain B, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C63|C Chain C, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C63|D Chain D, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C74|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C74|B Chain B, 14-3-3 Protein Eta (Human) Complexed To Peptide
Length = 247
Score = 202 bits (514), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 135/193 (69%), Gaps = 5/193 (2%)
Query: 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
REQ + A+LAEQAERY++M M ++ + P L+ E+RNLLSVAYKNV+G+ R++W
Sbjct: 5 REQLLQRARLAEQAERYDDMASAMKAVTELNEP---LSNEDRNLLSVAYKNVVGARRSSW 61
Query: 66 RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSAT--AGESK 123
R+ISSIEQK NE+ + VK YR K+E EL VC +L LLD L+ + ESK
Sbjct: 62 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK 121
Query: 124 VFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFS 183
VFYLKMKGDYYRYLAE G+++ + E + +YK A +I+ + PTHPIRLGLALNFS
Sbjct: 122 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS 181
Query: 184 VFYYEILNSSEKA 196
VFYYEI N+ E+A
Sbjct: 182 VFYYEIQNAPEQA 194
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN
5- Monooxygenase Activation Protein, Gamma Polypeptide
(Ywhag) From Homo Sapiens At 2.25 A Resolution
Length = 248
Score = 200 bits (508), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 134/197 (68%), Gaps = 5/197 (2%)
Query: 2 GTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSL 61
G REQ V A+LAEQAERY++ ++ + P L+ EERNLLSVAYKNV+G+
Sbjct: 1 GXVDREQLVQKARLAEQAERYDDXAAAXKNVTELNEP---LSNEERNLLSVAYKNVVGAR 57
Query: 62 RAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVP--SATA 119
R++WR+ISSIEQK NE+ + V+ YR K+E EL VC +L LLD++L+ S T
Sbjct: 58 RSSWRVISSIEQKTSADGNEKKIEXVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQ 117
Query: 120 GESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLA 179
ESKVFYLK KGDYYRYLAE G++R E++ +Y A +I+ PTHPIRLGLA
Sbjct: 118 YESKVFYLKXKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHXQPTHPIRLGLA 177
Query: 180 LNFSVFYYEILNSSEKA 196
LN+SVFYYEI N+ E+A
Sbjct: 178 LNYSVFYYEIQNAPEQA 194
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|B Chain B, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|C Chain C, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|D Chain D, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
Length = 268
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 11 YLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70
Y AKLA+ Y++++K + +S L + LL+ + +N + S+R + + I S
Sbjct: 34 YRAKLADMVGNYKDVIKVLTE--SSDFRDNSLIL----LLAGSLRNRVTSIRNSLKSIKS 87
Query: 71 IEQK--EEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLK 128
E+K +E N E + +++D + E + +++++D +L+ + G ++ F +K
Sbjct: 88 QEEKLRKEKSLNNEFIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIK 146
Query: 129 MKGDYYRYLAEFKVGDERKAAAENTMLSYKAA--QDIALTDLAPTHPIRLGLALNFSVFY 186
+KGD RY AE +E+ + + Y+ A ++ + + P+ P+ L LN+++
Sbjct: 147 LKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILK 206
Query: 187 YEILNSSEKA 196
Y++L + E A
Sbjct: 207 YDLLGNPEGA 216
>pdb|3H1C|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|B Chain B, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|C Chain C, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|G Chain G, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|I Chain I, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|K Chain K, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|M Chain M, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|O Chain O, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|R Chain R, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|T Chain T, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|V Chain V, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|X Chain X, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
Length = 549
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 92 SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDE 145
S S ++ VCG+ L L+D+ VP A L +GD Y L++ +GDE
Sbjct: 434 SNGSSSMASVCGASLALMDAG-VPIKAAVAGIAMGLVKEGDNYVVLSDI-LGDE 485
>pdb|3GCM|A Chain A, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GCM|B Chain B, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GCM|C Chain C, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GLL|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core
pdb|3GME|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase In
Complex With Rnase E And Manganese
Length = 549
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 92 SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDE 145
S S ++ VCG+ L L+D+ VP A L +GD Y L++ +GDE
Sbjct: 434 SNGSSSMASVCGASLALMDAG-VPIKAAVAGIAMGLVKEGDNYVVLSDI-LGDE 485
>pdb|3CDJ|A Chain A, Crystal Structure Of The E. Coli KhS1 DOMAIN TRUNCATED
Pnpase
Length = 559
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 92 SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDE 145
S S ++ VCG+ L L+D+ VP A L +GD Y L++ +GDE
Sbjct: 440 SNGSSSMASVCGASLALMDAG-VPIKAAVAGIAMGLVKEGDNYVVLSDI-LGDE 491
>pdb|3RHW|F Chain F, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|G Chain G, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|H Chain H, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|I Chain I, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|J Chain J, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RI5|F Chain F, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|G Chain G, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|H Chain H, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|I Chain I, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|J Chain J, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RIA|F Chain F, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|G Chain G, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|H Chain H, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|I Chain I, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|J Chain J, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIF|F Chain F, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|G Chain G, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|H Chain H, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|I Chain I, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|J Chain J, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate
Length = 221
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 116 SATAGESKVFYLKMKGDYYRYLAEF 140
S T+ +S V+Y GDYYRY F
Sbjct: 85 SLTSEDSAVYYCARDGDYYRYGRYF 109
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.129 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,106,058
Number of Sequences: 62578
Number of extensions: 180651
Number of successful extensions: 526
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 433
Number of HSP's gapped (non-prelim): 55
length of query: 196
length of database: 14,973,337
effective HSP length: 94
effective length of query: 102
effective length of database: 9,091,005
effective search space: 927282510
effective search space used: 927282510
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (23.5 bits)