Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>029244
MGASHLCLHYCYYQSAAGFAAFHRTAKALISKPSSTFLCRRRHHHRCLYRNTASAASAAC
NTSKEIRSTDLVALEFAELNLPVSNKITGELGHARIRQHVNPLSSSFTVPAPIPDWSEVY
KNPTLPLMVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIALT
LISRKNIIREGSCRSL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029244
        (196 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2175971 - symbol:AT5G17660 species:3702 "Arabi...   435  5.9e-41   1


>TAIR|locus:2175971 [details] [associations]
            symbol:AT5G17660 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006400 "tRNA modification"
            evidence=IEA] [GO:0008176 "tRNA (guanine-N7-)-methyltransferase
            activity" evidence=IEA] InterPro:IPR003358 Pfam:PF02390
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0036265
            eggNOG:COG0220 KO:K03439 GO:GO:0008176 TIGRFAMs:TIGR00091
            EMBL:AY088862 EMBL:BT003338 EMBL:BT008711 IPI:IPI00548109
            RefSeq:NP_568355.1 UniGene:At.43971 ProteinModelPortal:Q8L8R4
            PRIDE:Q8L8R4 EnsemblPlants:AT5G17660.1 GeneID:831632
            KEGG:ath:AT5G17660 TAIR:At5g17660 HOGENOM:HOG000237936
            InParanoid:Q8L8R4 OMA:PIHLDIG PhylomeDB:Q8L8R4
            ProtClustDB:CLSN2689753 ArrayExpress:Q8L8R4 Genevestigator:Q8L8R4
            Uniprot:Q8L8R4
        Length = 312

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 83/118 (70%), Positives = 99/118 (83%)

Query:    60 CNTSKEIRSTDLVALEFAELNLPVSNKITGELGHARIRQHVNPLSSSFTVPAPIPDWSEV 119
             C   K++RS +LV LE+AELNL  ++KI+ E+GH RIRQHVNPLSSSF+ PAP+P W EV
Sbjct:    62 CVDFKDLRSNELVELEYAELNL--NHKISEEVGHVRIRQHVNPLSSSFSKPAPVPVWDEV 119

Query:   120 YKNPTLPLMVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNI 177
             YK+P+LPLMVDIGSGSGRFL+W A +N +S NYLGLEIRQKLVKRA FWV EL LSN+
Sbjct:   120 YKDPSLPLMVDIGSGSGRFLLWQANKNVESRNYLGLEIRQKLVKRANFWVNELGLSNV 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      196       182   0.00098  109 3  11 22  0.39    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  163 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.80u 0.13s 14.93t   Elapsed:  00:00:01
  Total cpu time:  14.80u 0.13s 14.93t   Elapsed:  00:00:01
  Start:  Fri May 10 12:03:04 2013   End:  Fri May 10 12:03:05 2013

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