BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029247
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CXW3|CYBP_MOUSE Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1
Length = 229
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 13/166 (7%)
Query: 27 EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWS 83
E PA V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + S
Sbjct: 59 EKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERS 113
Query: 84 FDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QY 138
FD+ ++ GKNY L + I E S VK V+I+ K ++ D +
Sbjct: 114 FDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKE 173
Query: 139 KEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 184
++K KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 174 CKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219
>sp|Q6AYK6|CYBP_RAT Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1
Length = 229
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 13/166 (7%)
Query: 27 EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWS 83
E PA V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + S
Sbjct: 59 EKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERS 113
Query: 84 FDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QY 138
FD+ ++ GKNY L + I E S VK V+I+ K ++ D +
Sbjct: 114 FDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKE 173
Query: 139 KEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 184
++K KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 174 CKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219
>sp|Q3T168|CYBP_BOVIN Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1
Length = 230
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 23 LSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEF 79
L++ E PA V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F
Sbjct: 56 LTENEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNF 110
Query: 80 KQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL--- 136
+ SFD+ ++ GK+Y L + I E S VK V+I+ K ++ D
Sbjct: 111 TERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQ 170
Query: 137 --QYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 184
+ ++K KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 171 VEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 220
>sp|Q4R4P3|CYBP_MACFA Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2
SV=1
Length = 228
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 27 EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWS 83
E PA V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + S
Sbjct: 58 EKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERS 112
Query: 84 FDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QY 138
FD+ ++ GK+Y L + I E S VK V+I+ K + D +
Sbjct: 113 FDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKE 172
Query: 139 KEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 184
++K KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 173 CKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218
>sp|Q9HB71|CYBP_HUMAN Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2
Length = 228
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 27 EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWS 83
E PA V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + S
Sbjct: 58 EKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERS 112
Query: 84 FDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QY 138
FD+ ++ GK+Y L + I E S VK V+I+ K + D +
Sbjct: 113 FDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKE 172
Query: 139 KEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 184
++K KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 173 CKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218
>sp|Q5R6Z8|CYBP_PONAB Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1
Length = 228
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 13/166 (7%)
Query: 27 EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWS 83
E PA V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + S
Sbjct: 58 EKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERS 112
Query: 84 FDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QY 138
FD+ ++ GK+Y L + I E S VK V+I+ K + D +
Sbjct: 113 FDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKE 172
Query: 139 KEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 184
+++K KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 173 RKEKEKPSYDAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218
>sp|Q9SUR9|SGT1A_ARATH Protein SGT1 homolog A OS=Arabidopsis thaliana GN=SGT1A PE=1 SV=1
Length = 350
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 46/211 (21%)
Query: 15 ENNFLSSMLSKEE----GPAPVPTPAKVSSTPA--LNYITLGSFSWD--QDNEKVKIYIS 66
E NFL +++EE P P P+ V++ P L+ + + Q E+V + +
Sbjct: 112 ECNFL---ITEEEKDLVQPVPSTLPSSVTAPPVSELDVTPTAKYRHEYYQKPEEVVVTVF 168
Query: 67 LEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLF 126
+G+ + + +F + V +V G++ + PRL +I+P+K K V T++ I L
Sbjct: 169 AKGIPKQNVNIDFGEQILSVVI-EVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLA 227
Query: 127 KASKGNWLDLQYKE-----------------------------DKLKPNLDK-ERDPM-- 154
KA W L++ + DKL+ + K E+D
Sbjct: 228 KADIITWASLEHGKGPAVLPKPNVSSEVSQRPAYPSSKKVKDWDKLEAEVKKQEKDEKLE 287
Query: 155 --AGIMDLMKNMYEEGDDEMKRTIAKAWTDA 183
A + + +Y+ D++M+R ++K++ ++
Sbjct: 288 GDAALNKFFREIYQNADEDMRRAMSKSFVES 318
>sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B OS=Arabidopsis thaliana GN=SGT1B PE=1 SV=1
Length = 358
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 56 QDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVL 115
Q E+ + I + V ++ + EF + V DV G+ PRL +I+PEK +
Sbjct: 166 QKPEEAVVTIFAKKVPKENVTVEFGEQILSVVI-DVAGEEAYHLQPRLFGKIIPEKCRFE 224
Query: 116 VKPTRVVIMLFKASKGNWLDLQYKEDKL---KPNL------------------------- 147
V T+V I L KA W L+Y + + KPN+
Sbjct: 225 VLSTKVEIRLAKAEIITWASLEYGKGQSVLPKPNVSSALSQRPVYPSSKPAKDWDKLEAE 284
Query: 148 ------DKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDA 183
D++ D A + ++Y D++M+R + K++ ++
Sbjct: 285 VKKQEKDEKLDGDAAMNKFFSDIYSSADEDMRRAMNKSFAES 326
>sp|Q0JL44|SGT1_ORYSJ Protein SGT1 homolog OS=Oryza sativa subsp. japonica GN=SGT1 PE=1
SV=1
Length = 367
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 60 KVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT 119
+V + I +GV + + +F + V +V G+ PRL +I+PEKS+ V T
Sbjct: 178 EVVLTIFAKGVPAENVVVDFGEQMLSVSI-EVPGEEPYHFQPRLFSKIIPEKSRYQVLST 236
Query: 120 RVVIMLFKASKGNWLDLQY 138
+V I L KA + W L Y
Sbjct: 237 KVEIRLAKAEQITWTSLDY 255
>sp|Q14993|COJA1_HUMAN Collagen alpha-1(XIX) chain OS=Homo sapiens GN=COL19A1 PE=1 SV=3
Length = 1142
Score = 33.5 bits (75), Expect = 0.83, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 32/48 (66%)
Query: 103 LNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDLQYKEDKLKPNLDKE 150
LNQ+ +P+ S V+ +VV +F+A++G+ L+ ++ +L+P D++
Sbjct: 123 LNQQNIPQISIVVDGGKKVVEFMFQATEGDVLNYIFRNRELRPLFDRQ 170
>sp|Q2TVY7|VPS10_ASPOR Vacuolar protein sorting/targeting protein 10 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=vps10 PE=3 SV=1
Length = 1488
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 35 PAKVSSTP---ALNYITLGSFSWDQDNEKVKIYISLEGVVQDKMEA-EFKQW 82
P V++TP +L +I +GS QD E V I +G+ + K E +F++W
Sbjct: 501 PTMVTTTPDSTSLKFIVVGSLKESQDGEHVIYSIDFDGLHERKCEEDDFEKW 552
>sp|B8NX76|VPS10_ASPFN Vacuolar protein sorting/targeting protein 10 OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=vps10 PE=3 SV=1
Length = 1488
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 35 PAKVSSTP---ALNYITLGSFSWDQDNEKVKIYISLEGVVQDKMEA-EFKQW 82
P V++TP +L +I +GS QD E V I +G+ + K E +F++W
Sbjct: 501 PTMVTTTPDSTSLKFIVVGSLKESQDGEHVIYSIDFDGLHERKCEEDDFEKW 552
>sp|Q9Y2Z0|SUGT1_HUMAN Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1
PE=1 SV=3
Length = 365
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 52 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK 111
+ W Q +V I + ++ V ++ + EF + G++Y L+ I+PE+
Sbjct: 174 YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLH-PIIPEQ 232
Query: 112 SKVLVKPTRVVIMLFKASKGNWLDLQYKEDKLKP--------NLDKERDPM--------- 154
S V T++ I L K W L+ + D P NL P
Sbjct: 233 STFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVG 292
Query: 155 --------------AGIMDLMKNMYEEGDDEMKRTIAKAWTDA 183
A + L + +Y +G DE+KR + K++ ++
Sbjct: 293 EIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMES 335
>sp|O59709|GIT7_SCHPO Glucose-insensitive transcription protein 7 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=git7 PE=4 SV=2
Length = 379
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 32/164 (19%)
Query: 52 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK 111
+ W Q + + I I + V + + ++ + ++ G + L +EIVPEK
Sbjct: 186 YDWSQTSFSLNIDIYAKKVKDEDVSLLMEKNTLKIEIKLEDGSIFSLVLDPLYEEIVPEK 245
Query: 112 SKVLVKPTRVVIMLFK-----------------------------ASKGNWLDLQYKEDK 142
S + ++V I L K ++ GN + D
Sbjct: 246 SSFKLFSSKVEITLIKKVSEIKWEALVKSPANNSVNVYAKDSNHSSASGNTKNKAKDWDS 305
Query: 143 LKPNLDKERDPMAG---IMDLMKNMYEEGDDEMKRTIAKAWTDA 183
L D E D G + +L +N+Y+ DD+ +R + K++T++
Sbjct: 306 LAKLADLEEDEPTGEAALANLFQNLYKNADDDTRRAMMKSYTES 349
>sp|Q9UKP3|ITBP2_HUMAN Integrin beta-1-binding protein 2 OS=Homo sapiens GN=ITGB1BP2 PE=2
SV=1
Length = 347
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 110 EKSKVLVKPTRVVIMLFKASKGNWLDLQY 138
E+S V + P+RV I L KA G+W L++
Sbjct: 277 EQSSVFLMPSRVEISLVKADPGSWAQLEH 305
>sp|B1HN90|ADDA_LYSSC ATP-dependent helicase/nuclease subunit A OS=Lysinibacillus
sphaericus (strain C3-41) GN=addA PE=3 SV=1
Length = 1238
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 121 VVIMLFKASKGNWLDLQYKEDKLKPNLDKE 150
++ LF+ GNW+ L YK D++ P+ KE
Sbjct: 1163 IIDCLFEDEYGNWVLLDYKTDRILPHFAKE 1192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,099,279
Number of Sequences: 539616
Number of extensions: 3115591
Number of successful extensions: 7275
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7249
Number of HSP's gapped (non-prelim): 26
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)