Query 029247
Match_columns 196
No_of_seqs 208 out of 947
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 16:02:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o30_A Nuclear movement protei 99.9 1.4E-24 4.7E-29 167.3 9.6 124 49-188 4-130 (131)
2 1x5m_A Calcyclin-binding prote 99.9 8.3E-24 2.8E-28 162.1 12.5 98 44-141 15-116 (127)
3 2xcm_C SGT1-like protein, cyto 99.9 2.1E-22 7.3E-27 144.9 10.3 89 50-139 3-91 (92)
4 1rl1_A Suppressor of G2 allele 99.9 1.2E-21 4E-26 146.7 9.0 93 49-142 9-101 (114)
5 1ejf_A Progesterone receptor P 99.9 1.1E-21 3.7E-26 149.9 8.7 96 51-149 5-105 (125)
6 1wh0_A Ubiquitin carboxyl-term 99.8 1.4E-20 4.7E-25 145.8 10.4 95 45-140 15-122 (134)
7 2kmw_A Uncharacterized protein 99.8 9.4E-21 3.2E-25 149.3 7.6 97 49-149 4-105 (150)
8 1wgv_A KIAA1068 protein; CS do 99.8 6E-20 2.1E-24 140.0 11.2 93 49-142 19-114 (124)
9 2rh0_A NUDC domain-containing 99.8 1.5E-19 5.2E-24 143.3 10.0 116 47-187 11-131 (157)
10 1wfi_A Nuclear distribution ge 99.8 2.2E-20 7.5E-25 143.6 5.1 117 49-180 7-129 (131)
11 2cg9_X CO-chaperone protein SB 99.8 5.2E-20 1.8E-24 142.4 4.3 98 49-149 6-122 (134)
12 3qor_A Nuclear migration prote 99.7 9.7E-18 3.3E-22 127.4 10.7 89 49-141 16-109 (121)
13 2jtt_C Calcyclin-binding prote 99.7 1.2E-17 4.2E-22 100.0 2.7 34 151-184 2-35 (35)
14 3gla_A Low molecular weight he 98.3 6.3E-06 2.1E-10 59.3 11.0 81 49-130 4-99 (100)
15 4fei_A Heat shock protein-rela 98.2 2E-05 6.9E-10 57.1 11.8 81 49-130 6-96 (102)
16 4eld_A MJ16.5-P1, small heat s 98.2 1.3E-05 4.4E-10 62.8 11.0 83 47-130 54-152 (161)
17 3aab_A Putative uncharacterize 98.1 2.2E-05 7.5E-10 58.8 10.1 81 49-130 24-117 (123)
18 2k8q_A Protein SHQ1; beta-sand 98.1 6.6E-06 2.3E-10 63.1 6.3 84 49-138 3-92 (134)
19 3eud_A Protein SHQ1; CS domain 97.9 0.00013 4.4E-09 54.4 10.5 83 49-137 17-105 (115)
20 1gme_A Heat shock protein 16.9 97.8 0.00011 3.9E-09 57.0 9.6 81 49-130 43-139 (151)
21 2wj5_A Heat shock protein beta 97.7 0.00014 4.8E-09 52.6 7.7 78 52-130 4-90 (101)
22 3l1e_A Alpha-crystallin A chai 97.6 0.00039 1.3E-08 50.7 9.4 77 53-130 6-91 (106)
23 3q9p_A Heat shock protein beta 97.5 0.00087 3E-08 46.9 9.4 73 55-128 3-84 (85)
24 2y1y_A Alpha-crystallin B chai 97.3 0.00076 2.6E-08 47.6 6.9 74 56-130 3-85 (90)
25 2klr_A Alpha-crystallin B chai 97.0 0.0014 4.8E-08 52.1 7.0 78 52-130 66-152 (175)
26 2bol_A TSP36, small heat shock 96.7 0.0079 2.7E-07 52.0 9.2 81 50-131 99-191 (314)
27 2bol_A TSP36, small heat shock 92.7 0.35 1.2E-05 41.6 7.8 71 57-128 231-313 (314)
28 1sz9_A PCF11 protein; RNA poly 44.2 19 0.00064 27.0 3.4 27 155-181 84-110 (144)
29 3clj_A Protein NRD1; CTD-inter 29.4 31 0.0011 26.5 2.5 26 157-182 101-129 (157)
30 3isy_A Bsupi, intracellular pr 24.2 85 0.0029 22.9 4.0 62 55-119 14-77 (120)
31 3may_A RV0203, possible export 22.8 82 0.0028 22.4 3.5 32 156-187 31-62 (101)
32 3ry0_A Putative tautomerase; o 21.3 47 0.0016 20.6 1.8 22 164-185 7-28 (65)
33 3d0w_A YFLH protein; GRAM-posi 21.0 98 0.0033 22.2 3.6 34 150-183 67-100 (104)
No 1
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.91 E-value=1.4e-24 Score=167.32 Aligned_cols=124 Identities=13% Similarity=0.173 Sum_probs=74.0
Q ss_pred cCceEEEecCCEEEEEEEeC-CCCCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCCEEEEEEEe
Q 029247 49 LGSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 127 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk-~v~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~kIeI~L~K 127 (196)
.++|.|+||.+.|+|+|+++ ++.++++.|+|++++|+|.+. |.+ .+ .++||++|+|++|+|++.+++|+|+|.|
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~-~~~L~~~I~~e~S~w~i~~~kv~i~L~K 78 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VI-DGELLHEVDVSSLWWVINGDVVDVNVTK 78 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EE-EEEBSSCEEEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eE-ccccccccccccCEEEEeCCEEEEEEEE
Confidence 36799999999999999995 788999999999999999984 445 44 4699999999999999999999999999
Q ss_pred CCCCCcccccccccccCCCCCCCCCCc-hh-HHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCC
Q 029247 128 ASKGNWLDLQYKEDKLKPNLDKERDPM-AG-IMDLMKNMYEEGDDEMKRTIAKAWTDARSGKT 188 (196)
Q Consensus 128 ~~~~~W~~L~~~~~~~kp~wd~~~d~~-~~-l~~lfkkiY~~~dddtkRam~Ks~~ES~g~~~ 188 (196)
+...+|++|.+++.++.+ . ..+|+ .+ | .++|+|||+++.|+|+++++|++
T Consensus 79 ~~~~~W~~L~~~~~~id~--~-k~~~e~~~~l--------~dld~e~~~~v~k~~~d~~qk~~ 130 (131)
T 2o30_A 79 KRNEWWDSLLVGSESVDV--Q-KLAENKHADM--------SMLDAEAREVVEKMMHNTSGKDS 130 (131)
T ss_dssp SSCCCCSCSBC----------------------------------------------------
T ss_pred CCCCCCccccCCCCCCCH--h-HcCccccccc--------ccCCHHHHHHHHHHHHHHHHhhc
Confidence 965699999976633222 1 12333 33 4 47799999999999999999875
No 2
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=8.3e-24 Score=162.05 Aligned_cols=98 Identities=31% Similarity=0.505 Sum_probs=88.9
Q ss_pred ceecccCceEEEecCCEEEEEEEeCCC---CCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCCE
Q 029247 44 LNYITLGSFSWDQDNEKVKIYISLEGV---VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR 120 (196)
Q Consensus 44 ~~~~~i~ry~W~Qt~~~V~I~I~lk~v---~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~k 120 (196)
.++..+++|+|+||.+.|+|+|+++++ .++++.|+|++++|+|.+.+.+|++|.|.+.+||++|+|++|+|++.+++
T Consensus 15 ~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~k 94 (127)
T 1x5m_A 15 GYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDT 94 (127)
T ss_dssp CCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTE
T ss_pred ccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCE
Confidence 344778999999999999999999998 88999999999999999976677889998756999999999999999999
Q ss_pred EEEEEEeCCCC-Cccccccccc
Q 029247 121 VVIMLFKASKG-NWLDLQYKED 141 (196)
Q Consensus 121 IeI~L~K~~~~-~W~~L~~~~~ 141 (196)
|+|+|+|++++ +|++|+..+.
T Consensus 95 Vei~L~K~~~~~~W~~L~~~~~ 116 (127)
T 1x5m_A 95 VLILCRKKVENTRWDYLTQVEK 116 (127)
T ss_dssp EEEEEECSSSSCCCSSSBHHHH
T ss_pred EEEEEEECCCCCCCCccccccc
Confidence 99999999987 9999997654
No 3
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.88 E-value=2.1e-22 Score=144.89 Aligned_cols=89 Identities=24% Similarity=0.332 Sum_probs=82.7
Q ss_pred CceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCCEEEEEEEeCC
Q 029247 50 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 129 (196)
Q Consensus 50 ~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 129 (196)
++|+|+||.+.|+|+|+++|+.++++.|+|++++|+|++.+.+++.|.+.+ +||++|+|++|+|++.+++|+|+|.|++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQP-RLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECC-BBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEee-EcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 578999999999999999999999999999999999999765677899976 9999999999999999999999999999
Q ss_pred CCCccccccc
Q 029247 130 KGNWLDLQYK 139 (196)
Q Consensus 130 ~~~W~~L~~~ 139 (196)
+++|++|++.
T Consensus 82 ~~~W~~L~~~ 91 (92)
T 2xcm_C 82 IITWASLEHG 91 (92)
T ss_dssp SCCCSCSBTT
T ss_pred CCcchhcccC
Confidence 8899999853
No 4
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.86 E-value=1.2e-21 Score=146.73 Aligned_cols=93 Identities=24% Similarity=0.389 Sum_probs=84.2
Q ss_pred cCceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCCEEEEEEEeC
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA 128 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~kIeI~L~K~ 128 (196)
.++|+|+||.+.|+|+|+++++.++++.|+|++++|+|++...+++.|.+.+ +||++|+|++|+|++.+++|+|+|.|+
T Consensus 9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPIIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp CCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEE-CBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEe-eCCCcCCccccEEEEECCEEEEEEEcC
Confidence 4578999999999999999999889999999999999999765677899977 999999999999999999999999999
Q ss_pred CCCCcccccccccc
Q 029247 129 SKGNWLDLQYKEDK 142 (196)
Q Consensus 129 ~~~~W~~L~~~~~~ 142 (196)
++++|++|.+.+.+
T Consensus 88 ~~~~W~~L~~~~~~ 101 (114)
T 1rl1_A 88 EAVRWEKLEGQGDV 101 (114)
T ss_dssp SCCCCSSSBTTC--
T ss_pred CCCcCccccccCCc
Confidence 98899999976643
No 5
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.85 E-value=1.1e-21 Score=149.95 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=84.6
Q ss_pred ceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEe-CCCceeEeeccccccCccCCCceEEEcCCEEEEEEEeCC
Q 029247 51 SFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHD-VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 129 (196)
Q Consensus 51 ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~-~~~~~y~l~~~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 129 (196)
+|+|+||.+.|+|+|+++++ +++.|+|++++|+|++.+ .+|++|.+.+ +||++|+|++|+|++.+++|+|+|+|++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l-~L~~~I~~e~S~~~v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEI-DLFHCIDPNDSKHKRTDRSILCCLRKGE 81 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEE-EBSSCEEEEEEEEEECSSCEEEEEEESS
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEE-EccceeccccCEEEECCCEEEEEEEECC
Confidence 79999999999999999985 789999999999999864 5678899987 9999999999999999999999999998
Q ss_pred CC-Ccccccccccc---cCCCCCC
Q 029247 130 KG-NWLDLQYKEDK---LKPNLDK 149 (196)
Q Consensus 130 ~~-~W~~L~~~~~~---~kp~wd~ 149 (196)
++ +|++|++.+.+ ++++||+
T Consensus 82 ~~~~W~rL~~~~~K~~~lk~D~dk 105 (125)
T 1ejf_A 82 SGQSWPRLTKERAKLNWLSVDFNN 105 (125)
T ss_dssp TTCCCSSSBSSCCCCTTEEECTTT
T ss_pred CCCCCCceecCCCccccccCChHH
Confidence 75 99999987654 2446665
No 6
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.83 E-value=1.4e-20 Score=145.79 Aligned_cols=95 Identities=18% Similarity=0.329 Sum_probs=84.7
Q ss_pred eecccCceEEEec-CCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCCc------------eeEeeccccccCccCCC
Q 029247 45 NYITLGSFSWDQD-NEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGK------------NYRFTSPRLNQEIVPEK 111 (196)
Q Consensus 45 ~~~~i~ry~W~Qt-~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~~~------------~y~l~~~~L~~~I~pe~ 111 (196)
......||+|+|| .+.|+|+|+++++.++++.|+|++++|+|.+...++. .|.+.+ +||++|+|++
T Consensus 15 ~~~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~-~L~~~I~pe~ 93 (134)
T 1wh0_A 15 VNLAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQV-KLRNLIEPEQ 93 (134)
T ss_dssp EEESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEE-EBSSCEEEEE
T ss_pred ccccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEec-cccccCCchh
Confidence 3344678999999 9999999999999999999999999999999654444 788876 7999999999
Q ss_pred ceEEEcCCEEEEEEEeCCCCCcccccccc
Q 029247 112 SKVLVKPTRVVIMLFKASKGNWLDLQYKE 140 (196)
Q Consensus 112 S~~kv~~~kIeI~L~K~~~~~W~~L~~~~ 140 (196)
|+|++.+++|+|+|+|++..+|++|++..
T Consensus 94 S~~~v~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 94 CTFCFTASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp EEEEECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred CEEEEeCCEEEEEEEECCCCccccccccC
Confidence 99999999999999999888999999754
No 7
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.82 E-value=9.4e-21 Score=149.27 Aligned_cols=97 Identities=22% Similarity=0.353 Sum_probs=84.8
Q ss_pred cCceEEEecCCEEEEEEEeCCCCCCCcEEEEE-eeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCCEEEEEEEe
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 127 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~-~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~kIeI~L~K 127 (196)
.++|.|+||.+.|+|+|+++++ +++.|+|+ +++|+|++.+.+|+.|.+.+ +||++|+|+ |+|++.+++|+|+|+|
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l-~L~~~Idpe-S~~~v~~~kIei~L~K 79 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSL-ELYGKIMTE-YRKNVGLRNIIFSIQK 79 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEE-EBSSCEEEE-EEEEEESSSEEEEEEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEe-Ehhhccccc-ceEEecCCEEEEEEEE
Confidence 3689999999999999999986 58999999 79999998766778899987 999999999 9999999999999999
Q ss_pred CCCCCcccccccccc-c---CCCCCC
Q 029247 128 ASKGNWLDLQYKEDK-L---KPNLDK 149 (196)
Q Consensus 128 ~~~~~W~~L~~~~~~-~---kp~wd~ 149 (196)
+++++|++|++.+.+ . +.+||+
T Consensus 80 ~e~~~W~rL~k~~~K~~~~lk~Dwdk 105 (150)
T 2kmw_A 80 EERSWWTRLLKSEEKPAPYIKVDWNK 105 (150)
T ss_dssp CCSSCCSCSBSCCSSCCTTEEECSSS
T ss_pred CCCCcCcccccCCcccCccccccchh
Confidence 998899999976544 1 336665
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.82 E-value=6e-20 Score=139.97 Aligned_cols=93 Identities=18% Similarity=0.324 Sum_probs=82.0
Q ss_pred cCceEEEecCCEEEEEEEeC-CC-CCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCCE-EEEEE
Q 029247 49 LGSFSWDQDNEKVKIYISLE-GV-VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVIML 125 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk-~v-~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~k-IeI~L 125 (196)
.++|.|+||.+.|+|+|.++ ++ .++++.|+|++++|+|.+.+..+..+.+. ++||++|+|++|+|++.+++ |+|+|
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~-~~L~~~I~~e~S~w~i~~~k~v~i~L 97 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLME-GKLTHKINTESSLWSLEPGKCVLVNL 97 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEE-EEBSSCBCTTTCEEEECTTSEEEEEE
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEc-ccccCcCCCcCCEEEEeCCCEEEEEE
Confidence 45899999999999999997 66 88999999999999999976456666664 59999999999999999987 99999
Q ss_pred EeCCCCCcccccccccc
Q 029247 126 FKASKGNWLDLQYKEDK 142 (196)
Q Consensus 126 ~K~~~~~W~~L~~~~~~ 142 (196)
+|++..+|++|.+++.+
T Consensus 98 ~K~~~~~W~~L~~~~~~ 114 (124)
T 1wgv_A 98 SKVGEYWWNAILEGEEP 114 (124)
T ss_dssp CBSSSCCCSCSBTTSCC
T ss_pred EECCCCCCcCcccCCCc
Confidence 99988899999977643
No 9
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.80 E-value=1.5e-19 Score=143.29 Aligned_cols=116 Identities=16% Similarity=0.266 Sum_probs=95.9
Q ss_pred cccCceEEEecCCEEEEEEEeC-CCCCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCCE-EEEE
Q 029247 47 ITLGSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVIM 124 (196)
Q Consensus 47 ~~i~ry~W~Qt~~~V~I~I~lk-~v~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~k-IeI~ 124 (196)
...++|.|+||.+.|+|+|.++ ++.++++.|+|++++|+|.+. |.. .+ .++||++|+|++|+|++.+++ |+|+
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l-~g~L~~~I~~eeS~w~i~~~k~v~I~ 85 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-IL-KGKLFDSTIADEGTWTLEDRKMVRIV 85 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EE-EEEBSSCBCGGGCEEEEECCCEEEEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EE-eeccccccCccccEEEEcCCcEEEEE
Confidence 3567899999999999999997 778899999999999999985 343 34 469999999999999999987 9999
Q ss_pred EEeCCC---CCcccccccccccCCCCCCCCCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCC
Q 029247 125 LFKASK---GNWLDLQYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDARSGK 187 (196)
Q Consensus 125 L~K~~~---~~W~~L~~~~~~~kp~wd~~~d~~~~l~~lfkkiY~~~dddtkRam~Ks~~ES~g~~ 187 (196)
|.|++. .+|++|.+++.+ .|+.. .|+..||.|++.|++++...
T Consensus 86 L~K~~~~~~~~W~~L~k~~~~--------lD~~t------------~d~~~k~~~L~~f~~~~p~~ 131 (157)
T 2rh0_A 86 LTKTKRDAANCWTSLLESEYA--------ADPWV------------QDQMQRKLTLERFQKENPGF 131 (157)
T ss_dssp EEBSSCSTTCCCSEEETTEEE--------CCHHH------------HHHHHHHHHHHHHHHHCTTS
T ss_pred EEEcCCCcCCcChhhhcCCCC--------CChHH------------HHHHHHHHHHHHHHHHCCCC
Confidence 999986 599999976522 33332 24577888999999998775
No 10
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.80 E-value=2.2e-20 Score=143.57 Aligned_cols=117 Identities=17% Similarity=0.273 Sum_probs=90.3
Q ss_pred cCceEEEecCCEEEEEEEeC-C--CCCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCC-EEEEE
Q 029247 49 LGSFSWDQDNEKVKIYISLE-G--VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVVIM 124 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk-~--v~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~-kIeI~ 124 (196)
.++|.|+||.+.|+|+|.++ + +.++++.|+|++++|+|.+. |..+.+ .++||++|+|++|+|++.++ .|+|+
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~-~~~L~~~I~~e~s~w~i~~~k~v~i~ 82 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVV-DGELYNEVKVEESSWLIEDGKVVTVH 82 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSB-CSCBSSCBCSTTCEEEEETTTEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEE-ecccccccccccCEEEEcCCCEEEEE
Confidence 45789999999999999998 5 78899999999999999985 344545 56999999999999999998 69999
Q ss_pred EEeCCCC-CcccccccccccCCCCCCCCCCc-hhHHHHHHHHhcCCCHHHHHHHHHHH
Q 029247 125 LFKASKG-NWLDLQYKEDKLKPNLDKERDPM-AGIMDLMKNMYEEGDDEMKRTIAKAW 180 (196)
Q Consensus 125 L~K~~~~-~W~~L~~~~~~~kp~wd~~~d~~-~~l~~lfkkiY~~~dddtkRam~Ks~ 180 (196)
|.|++++ +|++|.+++.++ ++.+ -+|+ .. .++.|+|||.++.|+|
T Consensus 83 L~K~~~~~~W~~L~~~~~~i--d~~k-i~pe~~~--------~~dld~e~r~~vekmm 129 (131)
T 1wfi_A 83 LEKINKMEWWNRLVTSDPEI--NTKK-INPENSK--------LSDLDSETRSMVSGPS 129 (131)
T ss_dssp EEBSSSCCCCSCSBSSCCSC--CCSS-SSCCCCS--------CCCCCCCCCCCCCCCC
T ss_pred EEECCCCCCChhhhcCCCCC--CccE-ecCCCCC--------cccCCHHHHHHHHHHh
Confidence 9999875 999999766432 2222 1121 11 2367777776665543
No 11
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.78 E-value=5.2e-20 Score=142.38 Aligned_cols=98 Identities=26% Similarity=0.393 Sum_probs=78.9
Q ss_pred cCceEEEecCCE-------EEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC------CceeEeeccccccCccCCCceEE
Q 029247 49 LGSFSWDQDNEK-------VKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ------GKNYRFTSPRLNQEIVPEKSKVL 115 (196)
Q Consensus 49 i~ry~W~Qt~~~-------V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~------~~~y~l~~~~L~~~I~pe~S~~k 115 (196)
.++|.|+||.+. |+|+|+++++ +++.|+|++++|+|++.+.+ ++.|.+.+ +||++|+|++|+|+
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l-~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHI-DLYKEIIPEKTMHK 82 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEE-ECSSCCCSSSEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEE-EChhhccccccEEE
Confidence 367899999987 9999999986 58999999999999886533 47899987 99999999999999
Q ss_pred EcCCE-EEEEEEeCC--CCCcccccccccc---cCCCCCC
Q 029247 116 VKPTR-VVIMLFKAS--KGNWLDLQYKEDK---LKPNLDK 149 (196)
Q Consensus 116 v~~~k-IeI~L~K~~--~~~W~~L~~~~~~---~kp~wd~ 149 (196)
+.+++ |+|+|+|++ ..+|++|++.+.+ ++++||+
T Consensus 83 v~~~~~vei~L~K~~~~~~~W~rL~k~~~K~~~lk~D~dk 122 (134)
T 2cg9_X 83 VANGQHYFLKLYKKDLESEYWPRLTKEKVKYPYIKTDFDK 122 (134)
T ss_dssp ECCC--CEEEEEECSSSSCCCSCSSSSCCCCSSEEECTTT
T ss_pred ECCCEEEEEEEEECCCCCCCCCceecCCCccCcccCCchh
Confidence 99999 999999998 4599999987654 3557776
No 12
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.74 E-value=9.7e-18 Score=127.37 Aligned_cols=89 Identities=18% Similarity=0.275 Sum_probs=78.0
Q ss_pred cCceEEEecCCEEEEEEEeC-C--CCCCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCCceEEEcCC-EEEEE
Q 029247 49 LGSFSWDQDNEKVKIYISLE-G--VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVVIM 124 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk-~--v~~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~S~~kv~~~-kIeI~ 124 (196)
.++|.|+||.+.|+|+|.++ + +.++++.|+|++++|+|.+.+ ..+.+ .++||++|+|++|+|++.++ +|+|+
T Consensus 16 ~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg---~~~~~-~g~L~~~I~~deS~w~i~~~~~i~i~ 91 (121)
T 3qor_A 16 LPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG---QPAII-DGELYNEVKVEESSWLIADGAVVTVH 91 (121)
T ss_dssp CSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT---SCCSE-EEEBSSCBCGGGCEEEEETTTEEEEE
T ss_pred CCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC---cceEE-eccccccccccccEEEEcCCCEEEEE
Confidence 56799999999999999997 4 788999999999999998853 45655 46999999999999999986 89999
Q ss_pred EEeCCCC-Cccccccccc
Q 029247 125 LFKASKG-NWLDLQYKED 141 (196)
Q Consensus 125 L~K~~~~-~W~~L~~~~~ 141 (196)
|.|++.+ +|++|..++.
T Consensus 92 L~K~~~~~~W~~L~~~~~ 109 (121)
T 3qor_A 92 LEKINKMEWWSRLVSSDP 109 (121)
T ss_dssp EEBSSSSCCCSCSBTTSC
T ss_pred EEECCCCCCChhhhcCCC
Confidence 9999874 9999997763
No 13
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.68 E-value=1.2e-17 Score=100.02 Aligned_cols=34 Identities=50% Similarity=1.026 Sum_probs=30.2
Q ss_pred CCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHhC
Q 029247 151 RDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 184 (196)
Q Consensus 151 ~d~~~~l~~lfkkiY~~~dddtkRam~Ks~~ES~ 184 (196)
+||+++||+|||+||++|||||||||+|||+||+
T Consensus 2 ~dp~~~l~~~fk~iY~~gddd~kram~KS~~eS~ 35 (35)
T 2jtt_C 2 PGSSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 35 (35)
T ss_dssp ---CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred CChhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 4788999999999999999999999999999996
No 14
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.35 E-value=6.3e-06 Score=59.34 Aligned_cols=81 Identities=9% Similarity=0.125 Sum_probs=66.3
Q ss_pred cCceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC-----Cc----------eeEeeccccccCccCCCce
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----GK----------NYRFTSPRLNQEIVPEKSK 113 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~-----~~----------~y~l~~~~L~~~I~pe~S~ 113 (196)
.|.++|+++++.+.|.+.++|+.++++.|.++++.|.|+..... +. .|.-.+ .|-..|+++..+
T Consensus 4 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~-~LP~~vd~~~i~ 82 (100)
T 3gla_A 4 VPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRF-ALPDSADADGIT 82 (100)
T ss_dssp CCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEE-ECCTTBCTTSCE
T ss_pred cCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEE-ECCCCcChHHeE
Confidence 36789999999999999999999999999999999999874311 11 244444 788899999989
Q ss_pred EEEcCCEEEEEEEeCCC
Q 029247 114 VLVKPTRVVIMLFKASK 130 (196)
Q Consensus 114 ~kv~~~kIeI~L~K~~~ 130 (196)
.++..+-|+|+|.|..+
T Consensus 83 A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 83 AAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEETTEEEEEEEBC--
T ss_pred EEEeCCEEEEEEecCCC
Confidence 99999999999999753
No 15
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.24 E-value=2e-05 Score=57.14 Aligned_cols=81 Identities=7% Similarity=0.101 Sum_probs=67.5
Q ss_pred cCceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCCc----------eeEeeccccccCccCCCceEEEcC
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGK----------NYRFTSPRLNQEIVPEKSKVLVKP 118 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~~~----------~y~l~~~~L~~~I~pe~S~~kv~~ 118 (196)
.|.++|+++++.+.|.+.++|+.++++.|.++++.|.|+....... .|.-.+ .|-..|+++..+.++..
T Consensus 6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~-~LP~~vd~~~i~A~~~~ 84 (102)
T 4fei_A 6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVREL-AFPEPVRPASGVASLAG 84 (102)
T ss_dssp CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEE-ECSSCBCTTCCEEEEET
T ss_pred cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEE-ECCCCcchhHcEEEEEC
Confidence 3678999999999999999999999999999999999987431111 344444 78889999999999999
Q ss_pred CEEEEEEEeCCC
Q 029247 119 TRVVIMLFKASK 130 (196)
Q Consensus 119 ~kIeI~L~K~~~ 130 (196)
+-|+|+|.|..+
T Consensus 85 GvL~I~lpK~~~ 96 (102)
T 4fei_A 85 GVLTVRFEKLRP 96 (102)
T ss_dssp TEEEEEEEBSSC
T ss_pred CEEEEEEEccCc
Confidence 999999999764
No 16
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=98.21 E-value=1.3e-05 Score=62.79 Aligned_cols=83 Identities=13% Similarity=0.145 Sum_probs=67.2
Q ss_pred cccCceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC-----Cc-----------eeEeeccccccCccCC
Q 029247 47 ITLGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----GK-----------NYRFTSPRLNQEIVPE 110 (196)
Q Consensus 47 ~~i~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~-----~~-----------~y~l~~~~L~~~I~pe 110 (196)
.....++++++++.+.|.+.++|+.+++|.|.++++.|.|+..... +. .|.-.+ .|-..|+++
T Consensus 54 ~~~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~-~LP~~vd~~ 132 (161)
T 4eld_A 54 KGFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTI-KLPATVKEE 132 (161)
T ss_dssp ESCCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEE-ECSSCBCGG
T ss_pred CcccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEE-ECCCCcccc
Confidence 3344499999999999999999999999999999999999874321 11 233333 688899999
Q ss_pred CceEEEcCCEEEEEEEeCCC
Q 029247 111 KSKVLVKPTRVVIMLFKASK 130 (196)
Q Consensus 111 ~S~~kv~~~kIeI~L~K~~~ 130 (196)
..+.++..+-|+|+|.|.+.
T Consensus 133 ~i~A~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 133 NASAKFENGVLSVILPKAES 152 (161)
T ss_dssp GCEEEEETTEEEEEEEBCGG
T ss_pred cEEEEEECCEEEEEEEcCCC
Confidence 88888999999999999764
No 17
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.12 E-value=2.2e-05 Score=58.75 Aligned_cols=81 Identities=11% Similarity=0.067 Sum_probs=67.5
Q ss_pred cCceEEEecCCEEEEEEEeCCCCCCCcEEEEEe-eEEEEEEEeCCC--c---------eeEeeccccccCccCCCc-eEE
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQ-WSFDVKFHDVQG--K---------NYRFTSPRLNQEIVPEKS-KVL 115 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~-~sl~v~i~~~~~--~---------~y~l~~~~L~~~I~pe~S-~~k 115 (196)
.|.++|+++++.+.|.+.++|+.++++.|.+++ +.|.|+...... . .|.-.+ .|-..|+++.. +.+
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~-~LP~~vd~~~i~~A~ 102 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVI-RLPYNVAKDAEISGK 102 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEE-ECSSEECTTCCCEEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEE-ECCCCcCcchhCeeE
Confidence 367899999999999999999999999999999 999999853211 1 344444 78889999988 888
Q ss_pred EcCCEEEEEEEeCCC
Q 029247 116 VKPTRVVIMLFKASK 130 (196)
Q Consensus 116 v~~~kIeI~L~K~~~ 130 (196)
...+-|.|+|.|...
T Consensus 103 ~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 103 YENGVLTIRIPIAGT 117 (123)
T ss_dssp EETTEEEEEEEGGGE
T ss_pred EcCCEEEEEEEcCCC
Confidence 899999999999764
No 18
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.07 E-value=6.6e-06 Score=63.14 Aligned_cols=84 Identities=19% Similarity=0.208 Sum_probs=70.4
Q ss_pred cCceEEEecCCEEEEEEEeCCCC--CCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCc-cCCC--ceEEEcCCEEEE
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEI-VPEK--SKVLVKPTRVVI 123 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~--~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I-~pe~--S~~kv~~~kIeI 123 (196)
.|+|.=.|+++.|.|.|.++.+. ..++.+.++++.|.+... .|.|.+ .|-++| +.+. ++|....+.++|
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL-~LP~~V~e~~~~kA~YD~d~~~~~V 76 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRL-RFPHELIDDERSTAQYDSKDECINV 76 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEE-CCSSCEECCSSCEEEEETTTTEEEE
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEe-cCCCeeecCCCcceeEeccCCEEEE
Confidence 46789999999999999999887 789999999998888763 587876 899999 5554 456666789999
Q ss_pred EEEeCCCC-Ccccccc
Q 029247 124 MLFKASKG-NWLDLQY 138 (196)
Q Consensus 124 ~L~K~~~~-~W~~L~~ 138 (196)
+|.|..+| +|+.|--
T Consensus 77 tLpK~~~Ge~F~dLD~ 92 (134)
T 2k8q_A 77 KVAKLNKNEYFEDLDL 92 (134)
T ss_dssp EEEESSTTCCCSSTTC
T ss_pred EEeCCCCCCCCCCccc
Confidence 99999887 8998863
No 19
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.91 E-value=0.00013 Score=54.43 Aligned_cols=83 Identities=18% Similarity=0.225 Sum_probs=69.2
Q ss_pred cCceEEEecCCEEEEEEEeCCCC--CCCcEEEEEeeEEEEEEEeCCCceeEeeccccccCccCCC---ceEEEcCCEEEE
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK---SKVLVKPTRVVI 123 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~--~~~v~V~f~~~sl~v~i~~~~~~~y~l~~~~L~~~I~pe~---S~~kv~~~kIeI 123 (196)
.|+|.=.|+++.|.|.|.++.+. ..++.+.++++.+.+.+. .|-|.+ .|-++|..++ ++|....+.+.|
T Consensus 17 TP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL-~lP~~vved~~~~A~YD~d~g~~~v 90 (115)
T 3eud_A 17 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRL-RFPHELIDDERSTAQYDSKDECINV 90 (115)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEE-ECSSCEECSTTCEEEEETTTTEEEE
T ss_pred CCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEE-ecCcceecCCCcceEEeCCCcEEEE
Confidence 47889999999999999999765 778999999999998873 688876 8999995433 477778889999
Q ss_pred EEEeCCCC-Cccccc
Q 029247 124 MLFKASKG-NWLDLQ 137 (196)
Q Consensus 124 ~L~K~~~~-~W~~L~ 137 (196)
+|.|..+| ..+.|-
T Consensus 91 ~lpK~~~GE~F~dLD 105 (115)
T 3eud_A 91 KVAKLNKNEYFEDLD 105 (115)
T ss_dssp EEEESSTTCCCCCTT
T ss_pred EEcCCcCCCcCCCcc
Confidence 99999887 677664
No 20
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.83 E-value=0.00011 Score=56.95 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=65.8
Q ss_pred cCceEEEecCCEEEEEEEeCCCCCCCcEEEEE-eeEEEEEEEeCC-----Cc----------eeEeeccccccCccCCCc
Q 029247 49 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDVQ-----GK----------NYRFTSPRLNQEIVPEKS 112 (196)
Q Consensus 49 i~ry~W~Qt~~~V~I~I~lk~v~~~~v~V~f~-~~sl~v~i~~~~-----~~----------~y~l~~~~L~~~I~pe~S 112 (196)
.+.++|+++++.+.|.+.++|+.+++|.|.++ ++.|.|+..... +. .|.-.+ .|-..|+++..
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~i 121 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRF-RLLEDAKVEEV 121 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEE-ECSSCCCGGGC
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEE-ECCCCccccce
Confidence 46789999999999999999999999999995 579999873211 11 244334 78889999988
Q ss_pred eEEEcCCEEEEEEEeCCC
Q 029247 113 KVLVKPTRVVIMLFKASK 130 (196)
Q Consensus 113 ~~kv~~~kIeI~L~K~~~ 130 (196)
+.++..+-|+|+|.|...
T Consensus 122 ~A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 122 KAGLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEEEETTEEEEEEECCCC
T ss_pred EEEEECCEEEEEEEccCc
Confidence 888999999999999764
No 21
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.69 E-value=0.00014 Score=52.64 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=64.3
Q ss_pred eEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC---CC-----ceeEeeccccccCccCCCceEEE-cCCEEE
Q 029247 52 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 122 (196)
Q Consensus 52 y~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~---~~-----~~y~l~~~~L~~~I~pe~S~~kv-~~~kIe 122 (196)
.+++++++.+.|.+.++|+.++++.|.+.++.|.|+.... ++ .+|.-.+ .|-..|+++..+-++ ..+-|.
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~nGvL~ 82 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRY-RLPPGVDPAAVTSALSPEGVLS 82 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEE-ECCTTBCTTCCEEEECTTSEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHCEEEECCCCEEE
Confidence 4789999999999999999999999999999999988421 11 1244444 788899999999999 789999
Q ss_pred EEEEeCCC
Q 029247 123 IMLFKASK 130 (196)
Q Consensus 123 I~L~K~~~ 130 (196)
|+|.|...
T Consensus 83 I~lPK~~~ 90 (101)
T 2wj5_A 83 IQATPASA 90 (101)
T ss_dssp EEECBCCC
T ss_pred EEEECCCc
Confidence 99999754
No 22
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.63 E-value=0.00039 Score=50.74 Aligned_cols=77 Identities=8% Similarity=0.114 Sum_probs=64.1
Q ss_pred EEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC---CC-----ceeEeeccccccCccCCCceEEE-cCCEEEE
Q 029247 53 SWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVVI 123 (196)
Q Consensus 53 ~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~---~~-----~~y~l~~~~L~~~I~pe~S~~kv-~~~kIeI 123 (196)
+++++++.+.|.+.++|+.++++.|.+.++.|.|+.... ++ .+|.-.+ .|-..|+++.-+..+ ..+-|.|
T Consensus 6 ~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~~GvL~I 84 (106)
T 3l1e_A 6 EVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRY-RLPSNVDQSALSCSLSADGMLTF 84 (106)
T ss_dssp EEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEE-ECCTTBCTTSCEEEECTTSEEEE
T ss_pred EEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEEE
Confidence 789999999999999999999999999999999987321 11 2244434 788899999989999 7899999
Q ss_pred EEEeCCC
Q 029247 124 MLFKASK 130 (196)
Q Consensus 124 ~L~K~~~ 130 (196)
+|.|..+
T Consensus 85 ~~PK~~~ 91 (106)
T 3l1e_A 85 SGPKIPS 91 (106)
T ss_dssp EEEBCCC
T ss_pred EEEccCc
Confidence 9999764
No 23
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.51 E-value=0.00087 Score=46.87 Aligned_cols=73 Identities=5% Similarity=0.123 Sum_probs=60.1
Q ss_pred EecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC--------CceeEeeccccccCccCCCceEEEc-CCEEEEEE
Q 029247 55 DQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ--------GKNYRFTSPRLNQEIVPEKSKVLVK-PTRVVIML 125 (196)
Q Consensus 55 ~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~--------~~~y~l~~~~L~~~I~pe~S~~kv~-~~kIeI~L 125 (196)
+++++...|.+.++|+.+++|.|.+.++.|.|+..... ...|.-.+ .|-..|+++..+-++. .+-|.|+|
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~-~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKY-TLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEE-ECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChHHcEEEECCCCEEEEEE
Confidence 46788999999999999999999999999999884311 12354444 7889999999999998 89999999
Q ss_pred EeC
Q 029247 126 FKA 128 (196)
Q Consensus 126 ~K~ 128 (196)
.|.
T Consensus 82 PK~ 84 (85)
T 3q9p_A 82 PMP 84 (85)
T ss_dssp ECC
T ss_pred EcC
Confidence 985
No 24
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.28 E-value=0.00076 Score=47.59 Aligned_cols=74 Identities=4% Similarity=0.102 Sum_probs=56.5
Q ss_pred ecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC---CC-----ceeEeeccccccCccCCCceEEE-cCCEEEEEEE
Q 029247 56 QDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVVIMLF 126 (196)
Q Consensus 56 Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~---~~-----~~y~l~~~~L~~~I~pe~S~~kv-~~~kIeI~L~ 126 (196)
++++.+.|.+.++|+.++++.|.+.++.|.|+.... ++ .+|.-.+ .|-..|+++..+.++ ..+-|.|+|.
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~-~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEE-ECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEEEEEE
Confidence 467789999999999999999999999999988421 11 1244444 788899999889999 7899999999
Q ss_pred eCCC
Q 029247 127 KASK 130 (196)
Q Consensus 127 K~~~ 130 (196)
|...
T Consensus 82 K~~~ 85 (90)
T 2y1y_A 82 RKQV 85 (90)
T ss_dssp BC--
T ss_pred cCCC
Confidence 9753
No 25
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.05 E-value=0.0014 Score=52.12 Aligned_cols=78 Identities=4% Similarity=0.079 Sum_probs=60.9
Q ss_pred eEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC---CC-----ceeEeeccccccCccCCCceEEE-cCCEEE
Q 029247 52 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 122 (196)
Q Consensus 52 y~W~Qt~~~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~---~~-----~~y~l~~~~L~~~I~pe~S~~kv-~~~kIe 122 (196)
.+++++++.+.|.+.++|+.+++|.|++.++.|.|+.... ++ .+|.-.+ .|-..|+++..+-++ ..|-|+
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~-~LP~~Vd~~~i~A~~s~dGvL~ 144 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSLSSDGVLT 144 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEE-ECTTTCCTTTCEEEECTTSCEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEE-ECCCCcChhHeEEEEcCCCEEE
Confidence 4889999999999999999999999999999999987421 11 1244434 788999999999999 689999
Q ss_pred EEEEeCCC
Q 029247 123 IMLFKASK 130 (196)
Q Consensus 123 I~L~K~~~ 130 (196)
|+|.|...
T Consensus 145 I~lPK~~~ 152 (175)
T 2klr_A 145 VNGPRKQV 152 (175)
T ss_dssp EEEECC--
T ss_pred EEEECCCC
Confidence 99999754
No 26
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.66 E-value=0.0079 Score=52.00 Aligned_cols=81 Identities=7% Similarity=0.029 Sum_probs=65.8
Q ss_pred CceEEEecCC----EEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC----C---ceeEeeccccccCccCCCceEEEc-
Q 029247 50 GSFSWDQDNE----KVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ----G---KNYRFTSPRLNQEIVPEKSKVLVK- 117 (196)
Q Consensus 50 ~ry~W~Qt~~----~V~I~I~lk~v~~~~v~V~f~~~sl~v~i~~~~----~---~~y~l~~~~L~~~I~pe~S~~kv~- 117 (196)
+..+.+.+++ .+.|.+.++|+.+++|.|.++++.|.|+..... + ..|.-.+ .|-..|+++..+-++.
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~-~LP~~Vd~e~i~A~~~~ 177 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSI-PLPPSVDRNHIQATITT 177 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEE-ECCTTBCGGGCEEEECS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEE-ECCCCccccccEEEEeC
Confidence 4557788888 899999999999999999999999999884211 1 2455444 7889999999999999
Q ss_pred CCEEEEEEEeCCCC
Q 029247 118 PTRVVIMLFKASKG 131 (196)
Q Consensus 118 ~~kIeI~L~K~~~~ 131 (196)
.|-|.|+|.|..+.
T Consensus 178 nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 178 DDVLVIEAPVNEPN 191 (314)
T ss_dssp SSEEEEEEEBSSCC
T ss_pred CCEEEEEEeccCcc
Confidence 89999999997653
No 27
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=92.74 E-value=0.35 Score=41.60 Aligned_cols=71 Identities=8% Similarity=-0.019 Sum_probs=54.6
Q ss_pred cCCEEEEEEEe-CCCCCCCcEEEEEeeEEEEEEEeCC-Cc----------eeEeeccccccCccCCCceEEEcCCEEEEE
Q 029247 57 DNEKVKIYISL-EGVVQDKMEAEFKQWSFDVKFHDVQ-GK----------NYRFTSPRLNQEIVPEKSKVLVKPTRVVIM 124 (196)
Q Consensus 57 t~~~V~I~I~l-k~v~~~~v~V~f~~~sl~v~i~~~~-~~----------~y~l~~~~L~~~I~pe~S~~kv~~~kIeI~ 124 (196)
++..+.|.+.+ +|+.+++|.|.++.+.|+|+..... .. .|.=.+ .|-..|+++.-+-++..+-|.|+
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~i~A~~~dGvL~i~ 309 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAF-VTPEVVDASKTQAEIVDGLMVVE 309 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEE-ECSSEECGGGCEEEEETTEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEE-ECCCCcChHHeEEEEeCCEEEEE
Confidence 34578888888 9999999999999999999884311 11 132223 67788999988888889999999
Q ss_pred EEeC
Q 029247 125 LFKA 128 (196)
Q Consensus 125 L~K~ 128 (196)
|-|.
T Consensus 310 ~Pk~ 313 (314)
T 2bol_A 310 APLF 313 (314)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9874
No 28
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=44.23 E-value=19 Score=27.02 Aligned_cols=27 Identities=15% Similarity=0.330 Sum_probs=23.3
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 029247 155 AGIMDLMKNMYEEGDDEMKRTIAKAWT 181 (196)
Q Consensus 155 ~~l~~lfkkiY~~~dddtkRam~Ks~~ 181 (196)
..|.++|...|..+|+++|+.|.+-+.
T Consensus 84 ~~l~~~f~~~~~~~d~~~r~k~~rL~~ 110 (144)
T 1sz9_A 84 RNLFNLYKRTYLLVDNTTRTKLINMFK 110 (144)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 458899999999999999999988643
No 29
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=29.40 E-value=31 Score=26.49 Aligned_cols=26 Identities=19% Similarity=0.487 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHH---HHH
Q 029247 157 IMDLMKNMYEEGDDEMKRTIAKA---WTD 182 (196)
Q Consensus 157 l~~lfkkiY~~~dddtkRam~Ks---~~E 182 (196)
+..||..+|+.+++++|+.|.|- |+.
T Consensus 101 i~~l~~~~~~~~~~~~k~Ki~klldiW~k 129 (157)
T 3clj_A 101 IQELLSDAIAKSNQDHKEKIRMLLDIWDR 129 (157)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHcc
Confidence 45788889999999999998775 554
No 30
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=24.18 E-value=85 Score=22.87 Aligned_cols=62 Identities=18% Similarity=0.368 Sum_probs=44.1
Q ss_pred EecCCEEEEEEEeCCCCCCCcEEEEEee-EEEEEEEeCCC-ceeEeeccccccCccCCCceEEEcCC
Q 029247 55 DQDNEKVKIYISLEGVVQDKMEAEFKQW-SFDVKFHDVQG-KNYRFTSPRLNQEIVPEKSKVLVKPT 119 (196)
Q Consensus 55 ~Qt~~~V~I~I~lk~v~~~~v~V~f~~~-sl~v~i~~~~~-~~y~l~~~~L~~~I~pe~S~~kv~~~ 119 (196)
.|.++.|.+++.+.|.....+.+.|... ...|.+.+.+| .-|.++-+..|-... ...++.++
T Consensus 14 ~~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~---~~~tl~pG 77 (120)
T 3isy_A 14 IQEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAF---QNLTLESG 77 (120)
T ss_dssp EECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCC---EEEEECTT
T ss_pred ccCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhh---ceEEECCC
Confidence 5677899999999988888999999776 45888876444 446666666666532 34555554
No 31
>3may_A RV0203, possible exported protein; helical protein, heme-binding protein; 2.50A {Mycobacterium tuberculosis}
Probab=22.75 E-value=82 Score=22.44 Aligned_cols=32 Identities=13% Similarity=0.020 Sum_probs=27.8
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCC
Q 029247 156 GIMDLMKNMYEEGDDEMKRTIAKAWTDARSGK 187 (196)
Q Consensus 156 ~l~~lfkkiY~~~dddtkRam~Ks~~ES~g~~ 187 (196)
.+|.+|-.+++....+..|+=.++|.++|...
T Consensus 31 ~vN~~~T~~~~q~p~~q~~a~v~~Yf~aNPqv 62 (101)
T 3may_A 31 ETNQVMTAVLQQQVGPGSVASLKAHFEANPKV 62 (101)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHCHHH
T ss_pred CHHHHHHHHHccCChHHHHHHHHHHHHhCcHH
Confidence 47899999999978888999999999998654
No 32
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=21.33 E-value=47 Score=20.62 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=17.1
Q ss_pred HhcCCCHHHHHHHHHHHHHhCC
Q 029247 164 MYEEGDDEMKRTIAKAWTDARS 185 (196)
Q Consensus 164 iY~~~dddtkRam~Ks~~ES~g 185 (196)
|....++++||++.+..++.=.
T Consensus 7 ~~~Grs~eqk~~L~~~it~~~~ 28 (65)
T 3ry0_A 7 LLEGRSPQEVAALGEALTAAAH 28 (65)
T ss_dssp EESCCCHHHHHHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHHHHH
Confidence 4556789999999999887543
No 33
>3d0w_A YFLH protein; GRAM-positive bacterium, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Bacillus subtilis}
Probab=20.98 E-value=98 Score=22.16 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=29.2
Q ss_pred CCCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHh
Q 029247 150 ERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDA 183 (196)
Q Consensus 150 ~~d~~~~l~~lfkkiY~~~dddtkRam~Ks~~ES 183 (196)
..||...-..+++.|..-||++-|++++-.++.-
T Consensus 67 ~vdP~N~EerlLkELW~Va~eeEq~~LA~mmvKL 100 (104)
T 3d0w_A 67 HEEPQNGEEMLLQELWSVADEDEKEHLAQLLVKL 100 (104)
T ss_dssp CCCCCSHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4577777789999999999999999999888753
Done!