Query 029248
Match_columns 196
No_of_seqs 179 out of 783
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 16:04:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xzm_F EIF1; ribosome, transla 99.9 1.8E-25 6.2E-30 169.2 11.2 85 101-187 15-99 (101)
2 2ogh_A Eukaryotic translation 99.9 2.7E-25 9.1E-30 170.1 11.1 88 99-188 20-107 (108)
3 2if1_A EIF1, SUI1; translation 99.9 7.7E-24 2.6E-28 165.9 6.5 86 100-187 39-124 (126)
4 1d1r_A Hypothetical 11.4 KD pr 99.9 2.4E-22 8.2E-27 155.5 5.1 80 101-188 29-110 (116)
5 2d74_B Translation initiation 91.6 0.17 5.7E-06 40.1 4.1 66 101-176 31-100 (148)
6 2fhm_A Probable acylphosphatas 91.0 0.78 2.7E-05 32.8 6.8 67 120-188 7-73 (91)
7 1nee_A EIF-2-beta, probable tr 89.8 0.15 5E-06 40.0 2.2 66 101-176 29-98 (138)
8 1gxu_A Hydrogenase maturation 89.4 2 6.8E-05 30.7 7.9 63 120-187 12-74 (91)
9 2e9h_A EIF-5, eukaryotic trans 89.1 0.22 7.5E-06 39.9 2.7 71 102-176 25-99 (157)
10 3trg_A Acylphosphatase; fatty 89.0 1.8 6.1E-05 31.5 7.5 66 120-187 17-82 (98)
11 2lxf_A Uncharacterized protein 88.1 0.94 3.2E-05 34.5 5.6 66 121-188 40-105 (121)
12 1ulr_A Putative acylphosphatas 87.4 3.3 0.00011 29.2 7.9 64 120-187 7-72 (88)
13 2bjd_A Acylphosphatase; hypert 87.3 2.4 8.1E-05 31.0 7.2 66 120-187 19-84 (101)
14 1w2i_A Acylphosphatase; hydrol 86.4 2.8 9.4E-05 29.9 7.0 66 120-187 9-74 (91)
15 2g2k_A EIF-5, eukaryotic trans 85.8 0.27 9.1E-06 39.8 1.5 71 101-176 17-92 (170)
16 1urr_A CG18505 protein; acylph 85.2 2.9 0.0001 30.4 6.8 65 120-187 16-82 (102)
17 1k8b_A EIF-2-beta, probable tr 85.2 0.64 2.2E-05 30.5 2.8 46 111-163 3-52 (52)
18 2vh7_A Acylphosphatase-1; hydr 84.3 4.1 0.00014 29.4 7.2 65 120-187 13-79 (99)
19 2gv1_A Probable acylphosphatas 80.3 2.8 9.7E-05 29.8 5.0 66 120-187 9-75 (92)
20 2fa8_A Hypothetical protein AT 77.7 0.93 3.2E-05 33.8 1.7 20 1-20 3-22 (105)
21 3dex_A SAV_2001; alpha-beta pr 71.6 1.5 5.3E-05 32.8 1.6 15 8-22 15-29 (107)
22 1aps_A Acylphosphatase; hydrol 71.2 3.7 0.00013 29.6 3.5 54 120-175 12-65 (98)
23 3cw2_K Translation initiation 70.4 0.095 3.3E-06 41.1 -5.6 66 102-176 30-99 (139)
24 2oka_A Hypothetical protein; P 65.8 2.6 8.8E-05 31.4 1.7 17 6-22 6-22 (104)
25 2npb_A Selenoprotein W; struct 64.3 2.1 7E-05 31.3 0.9 12 6-17 3-14 (96)
26 2ojl_A Hypothetical protein; B 61.3 3 0.0001 31.2 1.4 16 7-22 10-25 (108)
27 2p0g_A Selenoprotein W-related 60.1 3.3 0.00011 30.8 1.4 16 7-22 5-20 (105)
28 2ljk_A Protein C17ORF37; MIEN1 54.9 6.9 0.00024 29.6 2.4 14 7-20 26-39 (117)
29 3vth_A Hydrogenase maturation 44.5 36 0.0012 33.1 6.2 65 119-187 14-80 (761)
30 3lqh_A Histone-lysine N-methyl 42.3 2.3 8E-05 34.4 -2.1 35 11-45 3-40 (183)
31 1wee_A PHD finger family prote 39.6 2.1 7.2E-05 29.1 -2.4 30 7-37 13-42 (72)
32 1we9_A PHD finger family prote 38.8 1.8 6.2E-05 28.5 -2.8 30 9-38 5-34 (64)
33 1wew_A DNA-binding family prot 37.2 3.1 0.00011 28.7 -1.9 30 5-36 11-42 (78)
34 2qrd_B SPCC1919.03C protein; A 31.8 52 0.0018 24.0 3.9 22 101-122 70-91 (97)
35 3o70_A PHD finger protein 13; 31.6 3 0.0001 28.3 -2.7 30 6-37 15-44 (68)
36 2v8q_B 5'-AMP-activated protei 31.1 50 0.0017 23.7 3.7 21 101-121 62-82 (87)
37 3t4n_B SNF1 protein kinase sub 27.9 58 0.002 24.5 3.7 20 102-121 86-105 (113)
38 4g9i_A Hydrogenase maturation 27.4 36 0.0012 33.0 3.2 56 119-175 6-63 (772)
39 1s3a_A NADH-ubiquinone oxidore 26.4 14 0.00049 26.6 0.1 26 18-43 22-47 (102)
40 1wep_A PHF8; structural genomi 24.9 5.4 0.00018 27.4 -2.4 30 8-38 10-39 (79)
41 2b30_A Pvivax hypothetical pro 24.2 2.2E+02 0.0075 23.2 7.1 61 129-190 189-249 (301)
42 3pgv_A Haloacid dehalogenase-l 22.7 2E+02 0.0068 22.8 6.4 60 130-190 175-234 (285)
43 1n91_A ORF, hypothetical prote 21.5 73 0.0025 23.5 3.1 27 161-188 48-74 (108)
44 3kqi_A GRC5, PHD finger protei 21.3 6.7 0.00023 26.7 -2.5 30 7-37 7-36 (75)
No 1
>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F
Probab=99.93 E-value=1.8e-25 Score=169.22 Aligned_cols=85 Identities=22% Similarity=0.293 Sum_probs=79.2
Q ss_pred CCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC
Q 029248 101 ERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP 180 (196)
Q Consensus 101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip 180 (196)
..+.|+|++++|+|||.||+|+||+ |++||++|||.|+++||||+||.++|.++++|+|||||+++|.+||.++- -+|
T Consensus 15 ~~~~v~I~~~~R~g~K~VT~V~Gl~-~~~dlk~laK~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~G-~~~ 92 (101)
T 2xzm_F 15 FQTHIHIRVEQRRGRKCFTTVEGIP-PEFDYEKIMKYWKKWLSCNATIVEEDEGKKVIKLNGDHRNQIQQFLSEEG-IAA 92 (101)
T ss_dssp CSCCEEEEEEEEETTEEEEEEECCC-TTSCTHHHHHHHHHHHTSCCCEEECSTTCEEEEEESCCHHHHHHHHHHHS-SSC
T ss_pred CCCeEEEEEEeccCCccEEEEecCC-CchhHHHHHHHHHHHhcCCeEEecCCCCceEEEEeCcHHHHHHHHHHHcC-CCC
Confidence 3678999999999999999999999 99999999999999999999999998888999999999999999999972 349
Q ss_pred CCcEEEc
Q 029248 181 ETAIYFI 187 (196)
Q Consensus 181 ~~~I~~~ 187 (196)
+++|++-
T Consensus 93 ~~~I~vh 99 (101)
T 2xzm_F 93 VDNITIH 99 (101)
T ss_dssp TTTEEEC
T ss_pred HHHEEEc
Confidence 9999874
No 2
>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-25 Score=170.05 Aligned_cols=88 Identities=28% Similarity=0.367 Sum_probs=82.3
Q ss_pred cCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCC
Q 029248 99 KKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA 178 (196)
Q Consensus 99 k~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ 178 (196)
++..+.|+|++++|+|||.||+|+||+. ++|+++|||.|+++||||+||.++++++++|+|||||+++|.+||.+++ .
T Consensus 20 ~~~~~~V~Ir~~~R~g~K~VT~V~Gl~~-~~dlk~lak~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~g-~ 97 (108)
T 2ogh_A 20 TATSNYIHIRIQQRNGRKTLTTVQGVPE-EYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQL-G 97 (108)
T ss_dssp CCCSCSEEEEEECCSSSCCEEEEECCCT-TSCHHHHHHHHHHHHCCCEEEECCTTSSCEEEEESSCHHHHHHHHHHHH-T
T ss_pred cCCCCeEEEEEEEccCCceEEEEeCCCc-chhHHHHHHHHHHHhcCceEEecCCCCceEEEEcCCHHHHHHHHHHHcC-C
Confidence 3668899999999999999999999997 9999999999999999999999998888999999999999999999986 7
Q ss_pred CCCCcEEEcc
Q 029248 179 VPETAIYFIE 188 (196)
Q Consensus 179 ip~~~I~~~~ 188 (196)
+|+++|++.+
T Consensus 98 ~~~~~I~vhg 107 (108)
T 2ogh_A 98 LQKKNIKIHG 107 (108)
T ss_dssp SCCSCEEECC
T ss_pred CCHHHEEEcC
Confidence 7999998753
No 3
>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1
Probab=99.89 E-value=7.7e-24 Score=165.95 Aligned_cols=86 Identities=26% Similarity=0.344 Sum_probs=79.4
Q ss_pred CCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCC
Q 029248 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV 179 (196)
Q Consensus 100 ~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~i 179 (196)
+..+.|+|++++|+|||.||+|+||+. ++|+++|||.|+++||||+||.+.++++++|+||||++++|.+||.++- -+
T Consensus 39 g~~~~V~Ir~~~R~grK~VT~V~GL~~-~~dlk~laK~LKkk~acgGtVk~~~e~g~~I~IQGD~r~~I~~~L~~~G-~~ 116 (126)
T 2if1_A 39 GTEDYIHIRIQQRNGRKTLTTVQGIAD-DYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIG-LA 116 (126)
T ss_dssp SCTTCEECCCCCSSSSCCBCEEBSCCT-TSCHHHHHTTHHHHTCCCEEEECCTTTSSEEEESBCCHHHHHHHHHHHT-SS
T ss_pred CCCCeEEEEEEeecCCccEEEEeCCCC-chhHHHHHHHHHHHhcCCeEEecCCCCccEEEEcCCHHHHHHHHHHHcC-CC
Confidence 668899999999999999999999998 9999999999999999999999888888999999999999999999973 34
Q ss_pred CCCcEEEc
Q 029248 180 PETAIYFI 187 (196)
Q Consensus 180 p~~~I~~~ 187 (196)
++++|++-
T Consensus 117 ~~~~I~vh 124 (126)
T 2if1_A 117 KDDQLKVH 124 (126)
T ss_dssp CTTTEECC
T ss_pred ChhhEEee
Confidence 79999863
No 4
>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1
Probab=99.85 E-value=2.4e-22 Score=155.48 Aligned_cols=80 Identities=23% Similarity=0.310 Sum_probs=72.1
Q ss_pred CCCcEEEEEEeecCC--eeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCC
Q 029248 101 ERQEVVIEKVVRNKR--KCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA 178 (196)
Q Consensus 101 ~~~~I~I~~~~R~~r--K~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ 178 (196)
..+.|+|+++ |+|| |.||+|+||+.|++|+++|||.|+++||||+|| .+++|+||||++++|.+||.++ |
T Consensus 29 ~~~~V~I~~e-r~gR~GK~VT~V~Gl~~~~~dlk~laK~LKkk~acgGtV-----k~~~IeiQGD~r~~i~~~L~~~--G 100 (116)
T 1d1r_A 29 GDGVVRIQRQ-TSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAV-----KDGVIEIQGDKRDLLKSLLEAK--G 100 (116)
T ss_dssp CCCEEEEEEC-CCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSSSSCCBC-----CSSCEEECSCCHHHHHHHHHHH--T
T ss_pred CCCeEEEEEE-eCCCCCCeEEEEeCCcCchhhHHHHHHHHHHHhcCCcEE-----cCCEEEEeCcHHHHHHHHHHHc--C
Confidence 3678999999 7776 999999999999999999999999999999999 4689999999999999999986 5
Q ss_pred CCCCcEEEcc
Q 029248 179 VPETAIYFIE 188 (196)
Q Consensus 179 ip~~~I~~~~ 188 (196)
++.++|+.++
T Consensus 101 ~~vk~i~~~~ 110 (116)
T 1d1r_A 101 MKVKLAGGLE 110 (116)
T ss_dssp CEECCCCCCC
T ss_pred CCcceecccc
Confidence 6777777664
No 5
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=91.62 E-value=0.17 Score=40.12 Aligned_cols=66 Identities=15% Similarity=0.176 Sum_probs=50.8
Q ss_pred CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248 101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176 (196)
Q Consensus 101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~ 176 (196)
..+++.+.++ |+| |+|.+|... .=++.-+.|.|..-+++.|++ + ++..+|+|.+.....+-++..|
T Consensus 31 kmP~~~v~~e---GkK--Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~i----d-~~rlii~G~~~~~~i~~~L~~y 100 (148)
T 2d74_B 31 EVPGALVTIE---GNK--TIIENFKDIADALNRDPQHLLKFLLREIATAGTL----E-GRRVVLQGRFTPYLIANKLKKY 100 (148)
T ss_dssp CCCCCCEEEE---TTE--EEESCHHHHHHHHTCCSHHHHHHHHHHSCCCEEE----E-TTEEEESSCCCHHHHHHHHHHH
T ss_pred ecCCCeEEEe---cCe--EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceee----c-CCEEEEEeeeCHHHHHHHHHHH
Confidence 4566666666 444 999998753 457888999999999999999 3 6899999999877666655544
No 6
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=91.01 E-value=0.78 Score=32.77 Aligned_cols=67 Identities=18% Similarity=0.135 Sum_probs=51.3
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE 188 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~ 188 (196)
.|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. .|.+||.....+-|...|+-++
T Consensus 7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~~~p~a~V~~v~ 73 (91)
T 2fhm_A 7 IVDGRVQ-GVGFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPEN-ALQSFVEAVKNGSPFSKVTDIS 73 (91)
T ss_dssp EEEEECC-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHH-HHHHHHHHHHTTCSSSEEEEEE
T ss_pred EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHHHhCCCccEEEEEE
Confidence 5888877 89999999999999999999988887879999999863 3444444333355666666653
No 7
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=89.79 E-value=0.15 Score=39.98 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=50.6
Q ss_pred CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248 101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176 (196)
Q Consensus 101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~ 176 (196)
..+++.+.++ |+| |+|.+|... .=++.-+.|.|..-+++.+++ + ++..+|+|.+.....+-++..|
T Consensus 29 ~mp~~~v~~e---G~k--Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~i----d-~~rlii~G~~~~~~i~~~L~~y 98 (138)
T 1nee_A 29 EVPKAYSVIQ---GNR--TFIQNFREVADALNRDPQHLLKFLLRELGTAGNL----E-GGRAILQGKFTHFLINERIEDY 98 (138)
T ss_dssp CCSCCCCCEE---TTE--EEESCHHHHHHHHCSSHHHHHHHHHHHCCSCCCC----B-TTTEEEESSCSSSHHHHHHHHH
T ss_pred ecCCCeEEEE---CCc--EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceee----c-CCEEEEEeeeCHHHHHHHHHHH
Confidence 3555555555 666 999998853 458999999999999999999 3 7799999999766665555444
No 8
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=89.44 E-value=2 Score=30.75 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=51.1
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-.......++.+++-.|.|...+++ -+|++||+- +.+.++|.... =|...|+-+
T Consensus 12 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~-~~f~~~l~~~~--P~~A~V~~v 74 (91)
T 1gxu_A 12 RIRGKVQ-GVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP-EVFLVQLYQHC--PPLARIDSV 74 (91)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC-HHHHHHHHHTC--CTTCEEEEE
T ss_pred EEEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH-HHHHHHHhhCC--CCCEEEEEE
Confidence 5888877 899999999999999999999887777 899999999 88888886632 234555544
No 9
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.06 E-value=0.22 Score=39.86 Aligned_cols=71 Identities=8% Similarity=0.093 Sum_probs=53.1
Q ss_pred CCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248 102 RQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176 (196)
Q Consensus 102 ~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~ 176 (196)
.+++.+.++-++.++ -|+|.+|... .=++.-+.|.|..-+++.+++. .+.+..+|+|.+.....+-++..|
T Consensus 25 mP~~~v~~eG~gnG~-KTvi~Nf~dIak~L~R~p~hv~ky~~~ELGt~g~id---~~~~rlii~G~~~~~~i~~~L~~y 99 (157)
T 2e9h_A 25 MPRLIAKVEGKGNGI-KTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFD---VKNDRYIVNGSHEANKLQDMLDGF 99 (157)
T ss_dssp EECCCEEECSSSSSC-EEEETTHHHHHHHTTSCTHHHHHHHHHHHTCCEEEE---TTTTEEEEEBCCCHHHHHHHHHHH
T ss_pred cCCCeEEEeccCCcc-EEEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeec---CCCCEEEEEeeeCHHHHHHHHHHH
Confidence 556677777774332 5888888753 4578899999999999999992 157899999999877666555444
No 10
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=88.97 E-value=1.8 Score=31.48 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=50.4
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-.......++.+++-.|.|-..+++.-+|++||+ .+.|..|+.....+=|...|+-+
T Consensus 17 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~-~~~l~~f~~~l~~gPp~A~V~~v 82 (98)
T 3trg_A 17 TVSGKVQ-GVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGE-RDSIMILTEWLWEGPPQAAVSNV 82 (98)
T ss_dssp EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHHTTTCSTTCEEEEE
T ss_pred EEEEeEC-CCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEEC-HHHHHHHHHHHHhCCCCcEEEEE
Confidence 5788877 899999999999999999999887777789999998 45566666554433344555544
No 11
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=88.10 E-value=0.94 Score=34.52 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=49.1
Q ss_pred EEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248 121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE 188 (196)
Q Consensus 121 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~ 188 (196)
|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+- +.|.+||.....+=|...|+-++
T Consensus 40 V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~-~~v~~f~~~l~~gPp~A~V~~v~ 105 (121)
T 2lxf_A 40 VTGKVQ-GVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPK-EQVDAFVKYLHKGSPKSVVKKVS 105 (121)
T ss_dssp EEECTT-CCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEH-HHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EEEeeC-CcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHHhCCCCCEEEEEE
Confidence 778777 8888999999999999999998888888899999973 44444443332354555665543
No 12
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=87.37 E-value=3.3 Score=29.24 Aligned_cols=64 Identities=13% Similarity=0.129 Sum_probs=49.4
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCch--HHHHHHHhhhCCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS--YDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~--~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-....+..++.+++-.|.|...++|.-+|.+||+-. +...++|. . +=|...|+-+
T Consensus 7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~-~--gP~~a~V~~v 72 (88)
T 1ulr_A 7 LVKGRVQ-GVGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK-Q--GPRLARVEAV 72 (88)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH-H--CSTTCEEEEE
T ss_pred EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH-h--CCCCcEEEEE
Confidence 5888877 89999999999999999999988877879999999863 45555554 2 3244555544
No 13
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=87.26 E-value=2.4 Score=30.97 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=50.3
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. .|.+||.....+=|...|+-+
T Consensus 19 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~gP~~A~V~~v 84 (101)
T 2bjd_A 19 RVYGLVQ-GVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEE-ALSKLLERIKQGPPAAEVEKV 84 (101)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHH-HHHHHHHHHTTCSTTCEEEEE
T ss_pred EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHHHhCCCccEEEEE
Confidence 5889887 99999999999999999999988887878999999863 355555444446234555544
No 14
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=86.37 E-value=2.8 Score=29.89 Aligned_cols=66 Identities=15% Similarity=0.145 Sum_probs=49.7
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-....+..++.+++-.|.|...+++.-+|++||+-.. |.+|+.....+=|...|+-+
T Consensus 9 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~-v~~f~~~l~~gP~~a~V~~v 74 (91)
T 1w2i_A 9 KIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEER-VEALIGWAHQGPPLARVTRV 74 (91)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHH-HHHHHHHTTTCSTTCEEEEE
T ss_pred EEEEEEC-CcCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHH-HHHHHHHHHhCCCCcEEEEE
Confidence 5888877 899999999999999999999888888799999998643 55555443323344555544
No 15
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=85.81 E-value=0.27 Score=39.84 Aligned_cols=71 Identities=8% Similarity=0.098 Sum_probs=52.0
Q ss_pred CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCC-CceEEEcCCchHHHHHHHhhh
Q 029248 101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTE-KEQIDVQGDISYDIVEFITDT 175 (196)
Q Consensus 101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~-~~eI~IQGD~~~~v~~~L~~~ 175 (196)
..+.+.+.++-++.++ -|+|.+|... .=++.-+.+.|..-+++.+++ ++ .+..+|+|.+....++-++..
T Consensus 17 kmP~~~v~~EG~gnG~-KTvi~Nf~dIak~L~R~p~hv~kyf~~ELGt~g~i----d~~~~rliinG~~~~~~i~~~L~~ 91 (170)
T 2g2k_A 17 KMPRLIAKVEGKGNGI-KTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQF----DVKNDRYIVNGSHEANKLQDMLDG 91 (170)
T ss_dssp CCCCCCCEEESCTTTC-EEECSSHHHHHHHHSSCCTTTHHHHHHHTTCCCEE----CTTTCCEEEEBCCCHHHHHHHHHH
T ss_pred cCCCCeEEEeccCCcc-EEEEEcHHHHHHHhCCCHHHHHHHHHHHhCCceee----cCCCCEEEEEeeeCHHHHHHHHHH
Confidence 4677788888884332 4777777642 345666778899999999999 43 789999999988777666554
Q ss_pred C
Q 029248 176 W 176 (196)
Q Consensus 176 ~ 176 (196)
|
T Consensus 92 y 92 (170)
T 2g2k_A 92 F 92 (170)
T ss_dssp H
T ss_pred H
Confidence 4
No 16
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=85.19 E-value=2.9 Score=30.38 Aligned_cols=65 Identities=8% Similarity=0.160 Sum_probs=49.4
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCch--HHHHHHHhhhCCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS--YDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~--~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. +...++|..+ +=|...|+-+
T Consensus 16 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~~--gP~~a~V~~v 82 (102)
T 1urr_A 16 EIFGRVQ-GVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLENN--RIPNAKVSKA 82 (102)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHC--CSTTCEEEEE
T ss_pred EEEEeEC-CcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc--CCCccEEEEE
Confidence 5888887 89999999999999999999988877778999999863 4445555432 3344555554
No 17
>1k8b_A EIF-2-beta, probable translation initiation factor 2 beta subunit; N-terminal domain, AIF2 subunit beta; NMR {Methanocaldococcus jannaschii} SCOP: d.241.1.1
Probab=85.18 E-value=0.64 Score=30.51 Aligned_cols=46 Identities=13% Similarity=0.123 Sum_probs=37.2
Q ss_pred eecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCC
Q 029248 111 VRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGD 163 (196)
Q Consensus 111 ~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD 163 (196)
.|-|+| |+|.+|... .=++.-+.|.|.+-+++.+++ + ++..+|+|.
T Consensus 3 ~~eG~k--Tvi~Nf~~Ia~~L~R~p~hv~ky~~~ELGt~g~i----d-~~rlii~G~ 52 (52)
T 1k8b_A 3 LIEGNR--TIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNL----E-GGRLILQRR 52 (52)
T ss_dssp EEETTE--EEECCHHHHHHHHHTCHHHHHHHHHHHHSSEEEE----E-TTEEEEECC
T ss_pred EEEcCe--EEEECHHHHHHHHCCCHHHHHHHHHHHhCCCeee----c-CCEEEEeCC
Confidence 355777 999998753 357899999999999999999 3 678888883
No 18
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=84.33 E-value=4.1 Score=29.37 Aligned_cols=65 Identities=22% Similarity=0.203 Sum_probs=49.2
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCc--hHHHHHHHhhhCCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~--~~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+- .+.+.++|... +=|...|+-+
T Consensus 13 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~~~--~p~~a~V~~v 79 (99)
T 2vh7_A 13 EIFGKVQ-GVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLETR--GSPKSHIDKA 79 (99)
T ss_dssp EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHHT--CSTTCEEEEE
T ss_pred EEEEeeC-CcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc--CCCceEEEEE
Confidence 5888887 8999999999999999999998887777899999986 34444555432 3244555554
No 19
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=80.27 E-value=2.8 Score=29.84 Aligned_cols=66 Identities=9% Similarity=0.022 Sum_probs=46.5
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh-CCCCCCCcEEEc
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT-WPAVPETAIYFI 187 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~-~~~ip~~~I~~~ 187 (196)
.|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. .|.+|+... ..+=|...|+-+
T Consensus 9 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~~gP~~a~V~~v 75 (92)
T 2gv1_A 9 WVYGRVQ-GVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEG-QVEKLMQWLKSGGPRSARVERV 75 (92)
T ss_dssp EEEEECT-TTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHH-HHHHHHHHHHHTSSTTSEEEEE
T ss_pred EEEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHhhccCCCceEEEEE
Confidence 5788776 77778888888999999999988777778999999863 244444333 335234445443
No 20
>2fa8_A Hypothetical protein ATU0228; ALPH-beta structure, 4 helix bundle, structural genomics, PS protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.47.1.23
Probab=77.70 E-value=0.93 Score=33.79 Aligned_cols=20 Identities=25% Similarity=0.624 Sum_probs=12.8
Q ss_pred CCCCCCceeeEeCCCCCCCc
Q 029248 1 MAEKPQPVRVLYCSICSLPA 20 (196)
Q Consensus 1 m~~~~~p~~V~YC~vCs~P~ 20 (196)
|+.....+.|.||.-|+|=+
T Consensus 3 m~~~~~~V~I~YC~~C~~~~ 22 (105)
T 2fa8_A 3 MTETKPRIAIRYCTQCNWLL 22 (105)
T ss_dssp ---CCCEEEEEEETTTTCHH
T ss_pred cCCCCCEEEEEECCCCCCHH
Confidence 55533459999999999633
No 21
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=71.62 E-value=1.5 Score=32.83 Aligned_cols=15 Identities=27% Similarity=0.687 Sum_probs=12.4
Q ss_pred eeeEeCCCCCCCccc
Q 029248 8 VRVLYCSICSLPAEY 22 (196)
Q Consensus 8 ~~V~YC~vCs~P~EY 22 (196)
+.|.||.-|+|=+-|
T Consensus 15 V~I~YC~~C~w~lRa 29 (107)
T 3dex_A 15 VQIEYCTQCRWLPRA 29 (107)
T ss_dssp EEEEEETTTTCHHHH
T ss_pred EEEEECCCCCChHHH
Confidence 889999999976654
No 22
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=71.23 E-value=3.7 Score=29.55 Aligned_cols=54 Identities=17% Similarity=0.028 Sum_probs=42.7
Q ss_pred EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh
Q 029248 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT 175 (196)
Q Consensus 120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~ 175 (196)
.|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. .|.+||...
T Consensus 12 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~l~~f~~~l 65 (98)
T 1aps_A 12 EVFGRVQ-GVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEE-KVNSMKSWL 65 (98)
T ss_dssp EEECTTS-CCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHH-HHHHHHHSS
T ss_pred EEEEEEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHH
Confidence 4888777 88888899999999999999877776768999999853 365565443
No 23
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=70.42 E-value=0.095 Score=41.11 Aligned_cols=66 Identities=18% Similarity=0.316 Sum_probs=49.8
Q ss_pred CCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248 102 RQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176 (196)
Q Consensus 102 ~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~ 176 (196)
.+++.+.++ |+| |+|.+|... .=++.-+.|.|..-+++.+++ ++++..+|+|.+.....+-++..|
T Consensus 30 mp~~~v~~e---G~k--Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~i----d~~~rlii~G~~~~~~i~~~L~~y 99 (139)
T 3cw2_K 30 LPNMIILNI---GNT--TIIRNFAEYCDRIRREDKICMKYLLKELAAPGNV----DDKGELVIQGKFSSQVINTLMERF 99 (139)
T ss_dssp CCCCCCCCC---SSS--CCCSCSSSTTTTTSSCCTTTHHHHSCCSSCCCCC----SSSCCCTTTCSCCSCCSCSTTTTT
T ss_pred cCCCeEEEE---CCe--EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceEE----CCCCeEEEEeeeCHHHHHHHHHHH
Confidence 444444444 656 999999875 346888999999999999999 447899999999876665555554
No 24
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=65.83 E-value=2.6 Score=31.35 Aligned_cols=17 Identities=18% Similarity=0.526 Sum_probs=13.3
Q ss_pred CceeeEeCCCCCCCccc
Q 029248 6 QPVRVLYCSICSLPAEY 22 (196)
Q Consensus 6 ~p~~V~YC~vCs~P~EY 22 (196)
.-+.|.||.-|+|=+-|
T Consensus 6 p~V~I~YC~~C~~~~Ra 22 (104)
T 2oka_A 6 PEIVITYCTQCQWLLRA 22 (104)
T ss_dssp CEEEEEEETTTTCHHHH
T ss_pred CEEEEEECCCCCChHHH
Confidence 44899999999975544
No 25
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=64.28 E-value=2.1 Score=31.31 Aligned_cols=12 Identities=42% Similarity=0.872 Sum_probs=10.4
Q ss_pred CceeeEeCCCCC
Q 029248 6 QPVRVLYCSICS 17 (196)
Q Consensus 6 ~p~~V~YC~vCs 17 (196)
..+.|.||..|+
T Consensus 3 ~~V~I~YC~~C~ 14 (96)
T 2npb_A 3 LAVRVVYSGACG 14 (96)
T ss_dssp EEEEEECCCCSC
T ss_pred CEEEEEEcCCCC
Confidence 358999999999
No 26
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=61.32 E-value=3 Score=31.24 Aligned_cols=16 Identities=19% Similarity=0.578 Sum_probs=12.6
Q ss_pred ceeeEeCCCCCCCccc
Q 029248 7 PVRVLYCSICSLPAEY 22 (196)
Q Consensus 7 p~~V~YC~vCs~P~EY 22 (196)
-+.|.||+-|+|=+-|
T Consensus 10 ~V~I~YC~~C~w~lRa 25 (108)
T 2ojl_A 10 RIAIQYCTQCQWLLRA 25 (108)
T ss_dssp EEEEEEETTTTCHHHH
T ss_pred EEEEEECCCCCChHHH
Confidence 3899999999985443
No 27
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=60.11 E-value=3.3 Score=30.81 Aligned_cols=16 Identities=19% Similarity=0.629 Sum_probs=12.8
Q ss_pred ceeeEeCCCCCCCccc
Q 029248 7 PVRVLYCSICSLPAEY 22 (196)
Q Consensus 7 p~~V~YC~vCs~P~EY 22 (196)
.+.|.||.-|+|=+-|
T Consensus 5 ~V~I~YC~~C~w~~Ra 20 (105)
T 2p0g_A 5 QIEIYYCRQCNWMLRS 20 (105)
T ss_dssp EEEEEEETTTTCHHHH
T ss_pred EEEEEECCCCCChHHH
Confidence 4899999999975544
No 28
>2ljk_A Protein C17ORF37; MIEN1, oncoprotein, signaling protein; NMR {Homo sapiens}
Probab=54.86 E-value=6.9 Score=29.57 Aligned_cols=14 Identities=36% Similarity=0.797 Sum_probs=11.2
Q ss_pred ceeeEeCCCCCCCc
Q 029248 7 PVRVLYCSICSLPA 20 (196)
Q Consensus 7 p~~V~YC~vCs~P~ 20 (196)
.+.|.||+-|+|=+
T Consensus 26 rV~IeYC~~C~~~~ 39 (117)
T 2ljk_A 26 RIVVEYCEPCGFEA 39 (117)
T ss_dssp CCEEEECTTTTCHH
T ss_pred eEEEEECCCCCCHH
Confidence 48999999998543
No 29
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=44.48 E-value=36 Score=33.10 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=48.1
Q ss_pred EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCc--hHHHHHHHhhhCCCCCCCcEEEc
Q 029248 119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDTWPAVPETAIYFI 187 (196)
Q Consensus 119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~--~~~v~~~L~~~~~~ip~~~I~~~ 187 (196)
-.|+|.-+ |+-...+...++.+++-.|.|...++| -+|++||+- .+...++|... +=|...|+-+
T Consensus 14 i~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG-Vei~~eG~~~~l~~f~~~L~~~--~Pp~a~V~~v 80 (761)
T 3vth_A 14 INIFGIVQ-GVGFRPFVFNIAQKYNLKGIVYNNSSG-LYIEVEGEEKDIEAFIREIKEN--PPSLSVIDEI 80 (761)
T ss_dssp EEEEEECS-SSSHHHHHHHHHHHTTCEEEEEEETTE-EEEEEEECHHHHHHHHHHHHHS--CCTTCEEEEE
T ss_pred EEEEEEeC-CcCcHHHHHHHHHHcCCeEEEEECCCe-EEEEEEECHHHHHHHHHHHhcC--CCCCeEEEee
Confidence 36889887 999999999999999999999877776 899999984 33444445432 3344455444
No 30
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=42.33 E-value=2.3 Score=34.37 Aligned_cols=35 Identities=17% Similarity=0.483 Sum_probs=25.6
Q ss_pred EeCCCCCCCcccccc---CCChhhHHHHHHHhCCCchh
Q 029248 11 LYCSICSLPAEYCEF---GPDFEKCKPWLIKNAPELYP 45 (196)
Q Consensus 11 ~YC~vCs~P~EYCEf---g~~~~kCk~WL~~~~p~l~~ 45 (196)
.|||+|..|+.--+| .-.-+.|..|....+=.+-+
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~ 40 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSD 40 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCH
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCH
Confidence 489999999877666 33456899998776655544
No 31
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=39.59 E-value=2.1 Score=29.06 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=21.3
Q ss_pred ceeeEeCCCCCCCccccccCCChhhHHHHHH
Q 029248 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLI 37 (196)
Q Consensus 7 p~~V~YC~vCs~P~EYCEfg~~~~kCk~WL~ 37 (196)
....+|| +|+.|.++=++.-.-+.|..|..
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H 42 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHH 42 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEE
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccC
Confidence 4578999 79999765444444557988853
No 32
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=38.83 E-value=1.8 Score=28.53 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=19.4
Q ss_pred eeEeCCCCCCCccccccCCChhhHHHHHHH
Q 029248 9 RVLYCSICSLPAEYCEFGPDFEKCKPWLIK 38 (196)
Q Consensus 9 ~V~YC~vCs~P~EYCEfg~~~~kCk~WL~~ 38 (196)
...||++|..|..-=++.-.-+.|..|...
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~ 34 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHG 34 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEET
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCc
Confidence 356999999997421333334478888644
No 33
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=37.18 E-value=3.1 Score=28.70 Aligned_cols=30 Identities=27% Similarity=0.534 Sum_probs=19.6
Q ss_pred CCceeeEeCCCCCCCccccccCCChh--hHHHHH
Q 029248 5 PQPVRVLYCSICSLPAEYCEFGPDFE--KCKPWL 36 (196)
Q Consensus 5 ~~p~~V~YC~vCs~P~EYCEfg~~~~--kCk~WL 36 (196)
..+-..+|| +|+.|.++ .|+-.-+ .|..|.
T Consensus 11 ~~~~~~~~C-iC~~~~~~-g~MI~CD~~~C~~W~ 42 (78)
T 1wew_A 11 FQPEIKVRC-VCGNSLET-DSMIQCEDPRCHVWQ 42 (78)
T ss_dssp SSCCCCCCC-SSCCCCCC-SCEEECSSTTTCCEE
T ss_pred cCCCCCEEe-ECCCcCCC-CCEEEECCccCCccc
Confidence 356678999 89999543 2222233 788885
No 34
>2qrd_B SPCC1919.03C protein; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} SCOP: d.353.1.1 PDB: 2ooy_B* 2qr1_B* 2qrc_B* 2oox_B* 2qre_B*
Probab=31.81 E-value=52 Score=24.05 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=19.4
Q ss_pred CCCcEEEEEEeecCCeeEEEEE
Q 029248 101 ERQEVVIEKVVRNKRKCITIVK 122 (196)
Q Consensus 101 ~~~~I~I~~~~R~~rK~VT~V~ 122 (196)
....+.+....|-++|+||+|=
T Consensus 70 k~~vlalg~T~Ry~~KyVT~vl 91 (97)
T 2qrd_B 70 QLGVLALSATTRYHRKYVTTAM 91 (97)
T ss_dssp SSSSEEEEEEEEETTEEEEEEE
T ss_pred cCCeEEEeeeeeeeceeEEEEE
Confidence 3688999999999999999983
No 35
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=31.64 E-value=3 Score=28.29 Aligned_cols=30 Identities=17% Similarity=0.434 Sum_probs=20.8
Q ss_pred CceeeEeCCCCCCCccccccCCChhhHHHHHH
Q 029248 6 QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLI 37 (196)
Q Consensus 6 ~p~~V~YC~vCs~P~EYCEfg~~~~kCk~WL~ 37 (196)
.+-..+|| +|+.|.. =+|.-.-+.|..|.-
T Consensus 15 ~~~~~~~C-iC~~~~~-~~~MIqCd~C~~WfH 44 (68)
T 3o70_A 15 YFQGLVTC-FCMKPFA-GRPMIECNECHTWIH 44 (68)
T ss_dssp TTTTCCCS-TTCCCCT-TCCEEECTTTCCEEE
T ss_pred CCCCceEe-ECCCcCC-CCCEEECCCCCcccc
Confidence 45678899 9999875 334444557888863
No 36
>2v8q_B 5'-AMP-activated protein kinase subunit beta-2; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Homo sapiens} SCOP: d.353.1.1 PDB: 2v92_B* 2v9j_B* 2y8l_B* 2y8q_B* 2y94_B* 2ya3_B*
Probab=31.14 E-value=50 Score=23.66 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=18.9
Q ss_pred CCCcEEEEEEeecCCeeEEEE
Q 029248 101 ERQEVVIEKVVRNKRKCITIV 121 (196)
Q Consensus 101 ~~~~I~I~~~~R~~rK~VT~V 121 (196)
....+.+....|-++|+||+|
T Consensus 62 k~~v~alg~T~Ry~~KyVT~v 82 (87)
T 2v8q_B 62 KDSVMVLSATHRYKKKYVTTL 82 (87)
T ss_dssp BTTEEEEEEEEEETTEEEEEE
T ss_pred cCCeEEEeeeeeecceeEEEE
Confidence 367889999999999999998
No 37
>3t4n_B SNF1 protein kinase subunit beta-2; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_B* 3te5_B*
Probab=27.88 E-value=58 Score=24.46 Aligned_cols=20 Identities=25% Similarity=0.504 Sum_probs=18.2
Q ss_pred CCcEEEEEEeecCCeeEEEE
Q 029248 102 RQEVVIEKVVRNKRKCITIV 121 (196)
Q Consensus 102 ~~~I~I~~~~R~~rK~VT~V 121 (196)
...+.+....|=++|+||+|
T Consensus 86 ~~vlalg~T~RYk~KyVT~V 105 (113)
T 3t4n_B 86 HNTLCVASIVRYKQKYVTQI 105 (113)
T ss_dssp TTEEEEEEEEEETTEEEEEE
T ss_pred CceEEEeeeeeeeceeEEEE
Confidence 56889999999999999998
No 38
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=27.44 E-value=36 Score=33.01 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=42.5
Q ss_pred EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCc--hHHHHHHHhhh
Q 029248 119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDT 175 (196)
Q Consensus 119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~--~~~v~~~L~~~ 175 (196)
-.|+|+-+ |+-..-+.-.|+++++=.|.|....+.+-+|.|||+- .+...+-|..+
T Consensus 6 i~v~G~VQ-GVGFRPfv~~lA~~~~l~G~V~N~~~~gV~i~~~g~~~~~~~F~~~l~~~ 63 (772)
T 4g9i_A 6 IHVQGIVQ-AVGFRPFVYRIAHEHNLRGYVKNLGDAGVEIVVEGREEDIEAFIEDLYKK 63 (772)
T ss_dssp EEECSSTT-TSSCHHHHHHHHHHTTCCCBCCCCSTTCEEEECCSCSTTHHHHHHHHHHS
T ss_pred EEEEEEEe-CCCccHHHHHHHHHcCCeEEEEECCCCeEEEEEEECHHHHHHHHHHHhhC
Confidence 45889988 9999999999999999999986544446899999964 33444444443
No 39
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=26.38 E-value=14 Score=26.55 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=20.5
Q ss_pred CCccccccCCChhhHHHHHHHhCCCc
Q 029248 18 LPAEYCEFGPDFEKCKPWLIKNAPEL 43 (196)
Q Consensus 18 ~P~EYCEfg~~~~kCk~WL~~~~p~l 43 (196)
+-.-||.+|++...-+++|..|.|++
T Consensus 22 l~~~yc~~~~sS~G~R~Fl~~~l~~~ 47 (102)
T 1s3a_A 22 IRIHLCQRSPGSQGVRDFIEKRYVEL 47 (102)
T ss_dssp EEEECCSSSCCCHHHHHHHHHTHHHH
T ss_pred EEEEEcCCCCCchhHHHHHHHhhHHH
Confidence 34568889999999999998776644
No 40
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=24.90 E-value=5.4 Score=27.44 Aligned_cols=30 Identities=23% Similarity=0.672 Sum_probs=19.5
Q ss_pred eeeEeCCCCCCCccccccCCChhhHHHHHHH
Q 029248 8 VRVLYCSICSLPAEYCEFGPDFEKCKPWLIK 38 (196)
Q Consensus 8 ~~V~YC~vCs~P~EYCEfg~~~~kCk~WL~~ 38 (196)
...+|| +|..|.+.=.+.-.-+.|..|...
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~ 39 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHG 39 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEH
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEe
Confidence 467899 999998522333334478888643
No 41
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=24.21 E-value=2.2e+02 Score=23.17 Aligned_cols=61 Identities=10% Similarity=0.259 Sum_probs=43.4
Q ss_pred CCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcccc
Q 029248 129 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIEDG 190 (196)
Q Consensus 129 idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~~~ 190 (196)
-.+..+...|...|.-+.+++.+...--+|.-.|-..-.....|.+.+ +++.+.+..++|.
T Consensus 189 ~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~-~~~~~~~~~~GD~ 249 (301)
T 2b30_A 189 SESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY-NISNDQVLVVGDA 249 (301)
T ss_dssp TTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT-TCCGGGEEEEECS
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHc-CCCHHHEEEECCC
Confidence 357788888887776556665543334577777777777888888888 9988777776653
No 42
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=22.70 E-value=2e+02 Score=22.80 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=41.3
Q ss_pred CHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcccc
Q 029248 130 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIEDG 190 (196)
Q Consensus 130 dlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~~~ 190 (196)
.+..+...|...|....+++-.....-+|.-.|-..-.....|.+.+ +|+.+.+..++|.
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l-gi~~~~~ia~GD~ 234 (285)
T 3pgv_A 175 HLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML-GYTLSDCIAFGDG 234 (285)
T ss_dssp HHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT-TCCGGGEEEEECS
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHh-CCCHHHEEEECCc
Confidence 35667777877777655555443333566666766777888888998 9998877776553
No 43
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=21.47 E-value=73 Score=23.50 Aligned_cols=27 Identities=15% Similarity=0.425 Sum_probs=23.5
Q ss_pred cCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248 161 QGDISYDIVEFITDTWPAVPETAIYFIE 188 (196)
Q Consensus 161 QGD~~~~v~~~L~~~~~~ip~~~I~~~~ 188 (196)
.|---..+.+||.+.| +||...|.++-
T Consensus 48 dGkAN~ali~~LAk~l-~V~ks~V~Iv~ 74 (108)
T 1n91_A 48 DGQANSHLVKFLGKQF-RVAKSQVVIEK 74 (108)
T ss_dssp HHHHHHHHHHHHHHHT-CCCTTTEEESS
T ss_pred CChHHHHHHHHHHHHh-CCccceEEEEe
Confidence 4667789999999999 99999999973
No 44
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=21.29 E-value=6.7 Score=26.72 Aligned_cols=30 Identities=30% Similarity=0.844 Sum_probs=19.6
Q ss_pred ceeeEeCCCCCCCccccccCCChhhHHHHHH
Q 029248 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLI 37 (196)
Q Consensus 7 p~~V~YC~vCs~P~EYCEfg~~~~kCk~WL~ 37 (196)
....+|| +|+.|.+-=++.-.-+.|..|..
T Consensus 7 ~~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH 36 (75)
T 3kqi_A 7 ATVPVYC-VCRLPYDVTRFMIECDACKDWFH 36 (75)
T ss_dssp CCCCEET-TTTEECCTTSCEEECTTTCCEEE
T ss_pred CCCeeEE-ECCCcCCCCCCEEEcCCCCCCEe
Confidence 3456799 99998753334433457888864
Done!