BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029249
MGNCQAIDAAALVIQHPNGRIERLYWPVTASEVMRMNPGHYVSLIIPLPSSSVSDEDKQP
DHQKTVRFTRVKLLRPSDTLSLGHAYRLVTSQEVMKVLRAKKSAKTKRLHQESVHENLQT
VQEKLIDSGAETQRDKENTNQVSIYLSTFKRIAKGILLTQSEFETCTGFLSFISIYPFSH
TYISMHLMLVRLKIFR

High Scoring Gene Products

Symbol, full name Information P value
AT1G60010 protein from Arabidopsis thaliana 3.2e-33
AT1G10530 protein from Arabidopsis thaliana 3.5e-27
AT5G50090 protein from Arabidopsis thaliana 1.8e-25
AT5G62900 protein from Arabidopsis thaliana 4.8e-23
AT5G67620 protein from Arabidopsis thaliana 2.5e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029249
        (196 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2202690 - symbol:AT1G60010 "AT1G60010" species...   362  3.2e-33   1
TAIR|locus:2194616 - symbol:AT1G10530 "AT1G10530" species...   305  3.5e-27   1
TAIR|locus:2170116 - symbol:AT5G50090 "AT5G50090" species...   289  1.8e-25   1
TAIR|locus:2170693 - symbol:AT5G62900 "AT5G62900" species...   266  4.8e-23   1
TAIR|locus:2158651 - symbol:AT5G67620 "AT5G67620" species...   231  2.5e-19   1


>TAIR|locus:2202690 [details] [associations]
            symbol:AT1G60010 "AT1G60010" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006833 "water transport" evidence=RCA]
            [GO:0009651 "response to salt stress" evidence=RCA] [GO:0009750
            "response to fructose stimulus" evidence=RCA] EMBL:CP002684
            EMBL:AC005966 InterPro:IPR025322 Pfam:PF14009
            ProtClustDB:CLSN2679588 EMBL:BT004978 EMBL:AK117703 IPI:IPI00546578
            PIR:D96624 RefSeq:NP_564752.1 UniGene:At.36736 IntAct:Q9ZUJ2
            PRIDE:Q9ZUJ2 EnsemblPlants:AT1G60010.1 GeneID:842295
            KEGG:ath:AT1G60010 TAIR:At1g60010 InParanoid:Q9ZUJ2 OMA:KHQSETS
            PhylomeDB:Q9ZUJ2 ArrayExpress:Q9ZUJ2 Genevestigator:Q9ZUJ2
            Uniprot:Q9ZUJ2
        Length = 173

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 76/146 (52%), Positives = 97/146 (66%)

Query:     1 MGNCQAIDAAALVIQHPNGRIERLYWPVTASEVMRMNPGHYXXXXX-----XXXXXXXXD 55
             MGNCQA+DAAALV+QHP+G+I+R Y PV+ SE+MRM PGHY                   
Sbjct:     1 MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTTT 60

Query:    56 EDKQPDHQKTVRFTRVKLLRPSDTLSLGHAYRLVTSQEVMKVLRAKKSAKTKRLHQESVH 115
             +DK    +K VRFTRVKLLRP++ L LGHAYRL+TSQEVMKVLRAKK AKTK+   E+  
Sbjct:    61 DDKS--ERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKKHQSETSK 118

Query:   116 ENLQTVQEKLIDSGAETQRDKENTNQ 141
             E  +   EK ID  ++  ++ E  ++
Sbjct:   119 EKKKPSSEKKIDEESDKNQNLETKDE 144


>TAIR|locus:2194616 [details] [associations]
            symbol:AT1G10530 "AT1G10530" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            EMBL:CP002684 InterPro:IPR025322 Pfam:PF14009 EMBL:BT009710
            EMBL:AK228105 IPI:IPI00546638 RefSeq:NP_172523.1 UniGene:At.42176
            UniGene:At.42177 IntAct:Q7XJ59 EnsemblPlants:AT1G10530.1
            GeneID:837594 KEGG:ath:AT1G10530 eggNOG:NOG254438 OMA:NCQAVNA
            ProtClustDB:CLSN2679588 Genevestigator:Q7XJ59 Uniprot:Q7XJ59
        Length = 166

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 70/152 (46%), Positives = 92/152 (60%)

Query:     1 MGNCQAIDAAALVIQHPNGRIERLYWPVTASEVMRMNPGHYXXXXXXXXXXXXXD---ED 57
             MGNCQA++AA LV+QHP G I+R Y  V+ +EVM M PGHY             +    +
Sbjct:     1 MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKNIPATE 60

Query:    58 KQPD--HQKTVRFTRVKLLRPSDTLSLGHAYRLVTSQEVMKVLRAKKSAKTKRLHQESVH 115
             K  D   +K VRFTRV+LLRP++ L LGHAYRL+TSQEVMKVLR KKSAKTK+ HQ    
Sbjct:    61 KGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKK-HQIEKT 119

Query:   116 ENLQTVQEKLIDSGAETQRDKENTNQVSIYLS 147
                +   +K +    + ++ +   N  S+  S
Sbjct:   120 TTAKKFSDKKVPEKKQGKQFRVIRNSTSLLKS 151


>TAIR|locus:2170116 [details] [associations]
            symbol:AT5G50090 "AT5G50090" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB026650 InterPro:IPR025322 Pfam:PF14009 EMBL:BT004765
            EMBL:AK227893 IPI:IPI00539015 RefSeq:NP_199820.1 UniGene:At.29750
            EnsemblPlants:AT5G50090.1 GeneID:835073 KEGG:ath:AT5G50090
            TAIR:At5g50090 eggNOG:NOG239341 HOGENOM:HOG000242807
            InParanoid:Q9FGA2 OMA:PNGKEEK PhylomeDB:Q9FGA2
            ProtClustDB:CLSN2687010 Genevestigator:Q9FGA2 Uniprot:Q9FGA2
        Length = 159

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 69/154 (44%), Positives = 92/154 (59%)

Query:     1 MGNCQAIDAAALVIQHPNGRIERLYWPVTASEVMRMNPGHYXXXXXXXXXXXXXDEDKQP 60
             MGNCQA+D A +VIQHPNG+ E+L  PV+AS VM+MNPGH                    
Sbjct:     1 MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSG--- 57

Query:    61 DHQKTVRFTRVKLLRPSDTLSLGHAYRLVTSQEVMKVLRAKKSAKTKRLHQESVHENLQT 120
              H   +R TR+KLLRP+DTL LGH YRL+T++EVMK L AKK +K K+  + S  + L+ 
Sbjct:    58 -HGGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGS-DDKLEM 115

Query:   121 VQEKLIDSGAETQRDKENTNQVSIYLSTFKRIAK 154
             V  K I+S   T+ D E+  Q+        RI++
Sbjct:   116 V--KAINS---TKLDNEDQLQMKKQEKERSRISR 144


>TAIR|locus:2170693 [details] [associations]
            symbol:AT5G62900 "AT5G62900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB009053 InterPro:IPR025322 Pfam:PF14009 HOGENOM:HOG000242807
            EMBL:AF370174 EMBL:AY133849 IPI:IPI00520744 RefSeq:NP_201095.1
            UniGene:At.8486 STRING:Q9FM06 EnsemblPlants:AT5G62900.1
            GeneID:836410 KEGG:ath:AT5G62900 TAIR:At5g62900 eggNOG:NOG277062
            InParanoid:Q9FM06 OMA:CTVNASE PhylomeDB:Q9FM06
            ProtClustDB:CLSN2916800 ArrayExpress:Q9FM06 Genevestigator:Q9FM06
            Uniprot:Q9FM06
        Length = 161

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 65/138 (47%), Positives = 85/138 (61%)

Query:     1 MGNCQAIDAAALVIQHPNGRIERLYWPVTASEVMRMNPGHYXXXXXXXXXXXXXDEDKQP 60
             MGNCQA +AA  VIQ P+G+  R Y  V ASEV++ +PGH+                  P
Sbjct:     1 MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLLSSAV---------P 51

Query:    61 DHQKTVRFTRVKLLRPSDTLSLGHAYRLVTSQEVMKVLRAKKSAKTKRLHQE-SVHE--- 116
              H  ++R TR+KLLRPSD L LGH YRL++S+EVMK +RAKKS K K++H E SV E   
Sbjct:    52 -HGGSLRVTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKSGKMKKIHGEFSVAEEEI 110

Query:   117 NLQTVQEKLIDSGAETQR 134
             N  T++ +   S  +TQR
Sbjct:   111 NPLTLRSESA-SDKDTQR 127


>TAIR|locus:2158651 [details] [associations]
            symbol:AT5G67620 "AT5G67620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0005874 "microtubule" evidence=IDA]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005874 EMBL:AB013390
            InterPro:IPR025322 Pfam:PF14009 HOGENOM:HOG000242807 EMBL:BT009721
            EMBL:AK228248 IPI:IPI00530798 RefSeq:NP_201563.1 UniGene:At.28803
            IntAct:Q9FJW1 STRING:Q9FJW1 PRIDE:Q9FJW1 EnsemblPlants:AT5G67620.1
            GeneID:836898 KEGG:ath:AT5G67620 TAIR:At5g67620 eggNOG:NOG325939
            InParanoid:Q9FJW1 OMA:KVERIYW ProtClustDB:CLSN2717147
            Genevestigator:Q9FJW1 Uniprot:Q9FJW1
        Length = 182

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 52/141 (36%), Positives = 76/141 (53%)

Query:     1 MGNCQAIDAAALVIQHP-NGRIERLYWPVTASEVMRMNPGHYXXXXXXXXXXXXXDEDKQ 59
             MGNCQA +AA ++I HP   ++ER+YW VTAS++M+ NPGHY                  
Sbjct:     1 MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTSPTMK------- 53

Query:    60 PDHQKTVRFTRVKLLRPSDTLSLGHAYRLVTSQEVMKVLRAKKSAKTKRLHQESVHENLQ 119
               ++K +   ++KLLRP DTL +GH YRLV+ +EV+     KK  K  +L +E    +L 
Sbjct:    54 --NEKGLPLKQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLLKEGGGLDLT 111

Query:   120 TVQEKLIDSGAETQRDKENTN 140
               + K      + +  K N N
Sbjct:   112 KKKTKHRKKKLDQETGKVNPN 132


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      196       183   0.00076  110 3  11 22  0.40    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.64u 0.16s 18.80t   Elapsed:  00:00:01
  Total cpu time:  18.64u 0.16s 18.80t   Elapsed:  00:00:01
  Start:  Fri May 10 12:09:06 2013   End:  Fri May 10 12:09:07 2013

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