Query 029255
Match_columns 196
No_of_seqs 186 out of 768
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 16:16:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029255.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029255hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 7.5E-55 2.6E-59 363.6 21.9 178 7-184 12-189 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 1.3E-36 4.3E-41 250.9 8.6 157 14-175 6-174 (179)
3 1v70_A Probable antibiotics sy 99.0 1.8E-09 6.2E-14 76.4 8.5 63 92-159 41-104 (105)
4 3h8u_A Uncharacterized conserv 99.0 1.7E-09 6E-14 80.6 8.8 81 71-165 41-123 (125)
5 1x82_A Glucose-6-phosphate iso 98.9 6.3E-09 2.2E-13 84.8 10.8 68 92-159 86-156 (190)
6 3fjs_A Uncharacterized protein 98.9 3.4E-09 1.2E-13 79.2 7.4 62 92-158 49-110 (114)
7 2b8m_A Hypothetical protein MJ 98.9 4.4E-09 1.5E-13 77.6 7.5 65 92-161 40-105 (117)
8 4e2g_A Cupin 2 conserved barre 98.9 6.5E-09 2.2E-13 77.3 8.0 72 71-158 43-114 (126)
9 1yfu_A 3-hydroxyanthranilate-3 98.8 1E-08 3.5E-13 84.1 9.1 56 90-146 46-101 (174)
10 1fi2_A Oxalate oxidase, germin 98.8 1.6E-08 5.6E-13 82.7 10.1 82 67-159 71-156 (201)
11 2gu9_A Tetracenomycin polyketi 98.8 1.1E-08 3.8E-13 73.7 8.1 62 92-158 34-98 (113)
12 1vj2_A Novel manganese-contain 98.8 8.1E-09 2.8E-13 77.9 7.5 63 92-159 61-123 (126)
13 4i4a_A Similar to unknown prot 98.8 1.6E-08 5.3E-13 75.5 8.9 60 92-156 47-106 (128)
14 2oa2_A BH2720 protein; 1017534 98.8 2.5E-08 8.7E-13 77.2 10.4 68 92-159 56-125 (148)
15 2o8q_A Hypothetical protein; c 98.8 1.3E-08 4.4E-13 76.8 8.3 80 66-158 38-118 (134)
16 2ozj_A Cupin 2, conserved barr 98.8 8.4E-09 2.9E-13 75.8 7.1 51 92-147 51-101 (114)
17 1yhf_A Hypothetical protein SP 98.8 1.4E-08 4.9E-13 74.2 8.2 58 92-156 53-110 (115)
18 2pfw_A Cupin 2, conserved barr 98.8 1.5E-08 5.2E-13 74.1 8.3 60 92-158 47-106 (116)
19 1lr5_A Auxin binding protein 1 98.8 1.7E-08 5.8E-13 79.1 8.9 68 92-159 54-126 (163)
20 3d82_A Cupin 2, conserved barr 98.8 6.6E-09 2.3E-13 74.0 6.0 51 91-146 41-92 (102)
21 3ht1_A REMF protein; cupin fol 98.8 1.7E-08 5.7E-13 76.4 8.1 63 92-159 52-116 (145)
22 3ibm_A Cupin 2, conserved barr 98.8 1.3E-08 4.5E-13 81.4 7.3 64 91-159 68-132 (167)
23 4b29_A Dimethylsulfoniopropion 98.8 1.4E-08 4.8E-13 86.0 7.8 66 90-160 143-208 (217)
24 3l2h_A Putative sugar phosphat 98.7 3.9E-08 1.3E-12 76.8 9.2 79 72-164 49-129 (162)
25 2i45_A Hypothetical protein; n 98.7 9.1E-09 3.1E-13 75.0 5.1 50 92-145 40-90 (107)
26 3kgz_A Cupin 2 conserved barre 98.7 2.2E-08 7.5E-13 79.6 7.5 65 92-161 57-121 (156)
27 2f4p_A Hypothetical protein TM 98.7 3.5E-08 1.2E-12 76.9 8.4 64 92-159 61-124 (147)
28 3d0j_A Uncharacterized protein 98.7 1.7E-08 5.7E-13 80.3 6.5 92 88-183 38-134 (140)
29 2q30_A Uncharacterized protein 98.7 3.1E-08 1.1E-12 71.3 7.3 62 92-159 46-109 (110)
30 3i7d_A Sugar phosphate isomera 98.7 8.7E-08 3E-12 76.0 10.1 76 72-161 46-124 (163)
31 3jzv_A Uncharacterized protein 98.7 6.8E-08 2.3E-12 77.6 9.2 64 91-159 65-128 (166)
32 2vqa_A SLL1358 protein, MNCA; 98.7 8.3E-08 2.8E-12 83.8 10.2 80 70-159 53-133 (361)
33 3lwc_A Uncharacterized protein 98.7 5.1E-08 1.7E-12 74.2 7.5 75 71-164 42-116 (119)
34 2vqa_A SLL1358 protein, MNCA; 98.7 1.4E-07 4.6E-12 82.5 11.1 67 92-158 247-314 (361)
35 1zvf_A 3-hydroxyanthranilate 3 98.7 8.7E-08 3E-12 78.7 9.2 57 90-146 45-104 (176)
36 1dgw_A Canavalin; duplicated s 98.7 1.2E-07 4.2E-12 76.4 9.9 75 71-157 43-119 (178)
37 2opk_A Hypothetical protein; p 98.7 6E-08 2.1E-12 72.4 7.2 62 93-157 47-109 (112)
38 1o5u_A Novel thermotoga mariti 98.6 1.2E-07 4.3E-12 70.3 8.6 51 92-147 43-93 (101)
39 3rns_A Cupin 2 conserved barre 98.6 8E-08 2.7E-12 79.8 7.7 72 70-158 38-109 (227)
40 1j58_A YVRK protein; cupin, de 98.6 9.5E-08 3.2E-12 84.4 8.5 78 71-159 81-158 (385)
41 2bnm_A Epoxidase; oxidoreducta 98.6 1.8E-07 6.2E-12 74.8 8.8 61 94-155 135-196 (198)
42 4h7l_A Uncharacterized protein 98.6 9.5E-08 3.3E-12 77.2 7.0 59 92-159 58-119 (157)
43 1y9q_A Transcriptional regulat 98.6 2.3E-07 8E-12 74.1 9.3 59 93-157 120-178 (192)
44 2fqp_A Hypothetical protein BP 98.6 1.1E-07 3.7E-12 68.6 6.5 58 92-153 31-90 (97)
45 1o4t_A Putative oxalate decarb 98.6 1.7E-07 5.8E-12 71.4 8.0 57 92-153 70-127 (133)
46 3cew_A Uncharacterized cupin p 98.6 1.9E-07 6.6E-12 69.6 8.1 60 94-158 42-102 (125)
47 1j58_A YVRK protein; cupin, de 98.6 4.9E-07 1.7E-11 79.8 11.6 67 92-158 270-337 (385)
48 2d5f_A Glycinin A3B4 subunit; 98.6 3.4E-07 1.2E-11 85.4 11.0 73 91-164 379-454 (493)
49 4e2q_A Ureidoglycine aminohydr 98.6 3.7E-07 1.3E-11 79.1 10.5 72 72-158 189-260 (266)
50 2cav_A Protein (canavalin); vi 98.5 2.6E-07 8.9E-12 85.0 9.9 78 71-159 88-166 (445)
51 3h7j_A Bacilysin biosynthesis 98.5 1.7E-07 5.8E-12 78.5 7.8 63 92-159 159-221 (243)
52 1fxz_A Glycinin G1; proglycini 98.5 5.5E-07 1.9E-11 83.6 11.9 66 90-156 349-416 (476)
53 3c3v_A Arachin ARAH3 isoform; 98.5 5.5E-07 1.9E-11 84.4 11.5 72 90-162 383-457 (510)
54 3rns_A Cupin 2 conserved barre 98.5 2.5E-07 8.4E-12 76.9 7.3 56 92-154 166-222 (227)
55 1uij_A Beta subunit of beta co 98.5 4.4E-07 1.5E-11 82.7 9.6 77 70-157 50-127 (416)
56 1sef_A Conserved hypothetical 98.5 6E-07 2.1E-11 76.5 9.7 59 92-155 195-255 (274)
57 1juh_A Quercetin 2,3-dioxygena 98.5 5.2E-07 1.8E-11 79.9 9.3 64 94-158 65-129 (350)
58 2ea7_A 7S globulin-1; beta bar 98.5 6.2E-07 2.1E-11 82.2 9.9 77 70-157 62-139 (434)
59 3qac_A 11S globulin SEED stora 98.4 5.2E-07 1.8E-11 83.7 8.9 82 67-159 49-167 (465)
60 2xlg_A SLL1785 protein, CUCA; 98.4 1.9E-07 6.4E-12 79.5 5.5 65 92-156 56-137 (239)
61 1fxz_A Glycinin G1; proglycini 98.4 4.7E-07 1.6E-11 84.0 8.4 81 67-158 47-149 (476)
62 1y3t_A Hypothetical protein YX 98.4 6.2E-07 2.1E-11 76.8 8.5 62 92-159 231-293 (337)
63 2qnk_A 3-hydroxyanthranilate 3 98.4 7E-07 2.4E-11 78.2 8.7 54 92-147 44-98 (286)
64 1y3t_A Hypothetical protein YX 98.4 8.1E-07 2.8E-11 76.1 8.6 61 92-158 59-120 (337)
65 3nw4_A Gentisate 1,2-dioxygena 98.4 6.1E-07 2.1E-11 81.0 8.2 58 92-154 116-174 (368)
66 3fz3_A Prunin; TREE NUT allerg 98.4 1.6E-06 5.6E-11 81.5 11.2 73 90-163 405-480 (531)
67 3bcw_A Uncharacterized protein 98.4 3.3E-07 1.1E-11 70.4 5.4 66 67-147 47-112 (123)
68 1sfn_A Conserved hypothetical 98.4 2E-06 6.7E-11 72.4 10.6 73 71-158 167-239 (246)
69 2e9q_A 11S globulin subunit be 98.4 6.4E-07 2.2E-11 82.8 7.9 81 67-158 62-163 (459)
70 4axo_A EUTQ, ethanolamine util 98.4 1.4E-06 4.9E-11 69.6 8.7 61 96-164 81-141 (151)
71 1rc6_A Hypothetical protein YL 98.4 1.5E-06 5.2E-11 73.2 9.3 57 92-153 192-250 (261)
72 2d5f_A Glycinin A3B4 subunit; 98.4 1E-06 3.5E-11 82.1 8.9 81 66-158 43-149 (493)
73 2d40_A Z3393, putative gentisa 98.3 6.7E-07 2.3E-11 79.5 7.1 60 92-156 113-173 (354)
74 3c3v_A Arachin ARAH3 isoform; 98.3 1.3E-06 4.4E-11 81.9 8.9 83 66-159 46-163 (510)
75 2phl_A Phaseolin; plant SEED s 98.3 1.8E-06 6.3E-11 78.4 9.2 78 70-158 53-137 (397)
76 3bu7_A Gentisate 1,2-dioxygena 98.3 1.8E-06 6.1E-11 78.5 9.0 59 92-155 307-366 (394)
77 3h7j_A Bacilysin biosynthesis 98.3 1.6E-06 5.5E-11 72.5 8.0 59 92-155 47-106 (243)
78 2pyt_A Ethanolamine utilizatio 98.3 1.9E-06 6.5E-11 66.7 7.8 56 93-156 70-125 (133)
79 3bu7_A Gentisate 1,2-dioxygena 98.3 3E-06 1E-10 77.1 10.2 59 92-154 136-195 (394)
80 1uij_A Beta subunit of beta co 98.3 3.6E-06 1.2E-10 76.6 10.8 68 90-159 260-342 (416)
81 2arc_A ARAC, arabinose operon 98.3 2.6E-06 9E-11 64.7 8.1 49 93-146 32-80 (164)
82 2phl_A Phaseolin; plant SEED s 98.3 4.6E-06 1.6E-10 75.8 10.9 68 90-159 250-325 (397)
83 2e9q_A 11S globulin subunit be 98.3 3.9E-06 1.3E-10 77.6 10.5 86 73-159 306-403 (459)
84 3ksc_A LEGA class, prolegumin; 98.3 2.2E-06 7.5E-11 80.1 8.8 82 66-158 44-146 (496)
85 3ksc_A LEGA class, prolegumin; 98.2 9.9E-06 3.4E-10 75.7 12.8 84 75-159 344-439 (496)
86 1juh_A Quercetin 2,3-dioxygena 98.2 1.5E-06 5E-11 77.0 6.9 62 91-158 264-325 (350)
87 2vpv_A Protein MIF2, MIF2P; nu 98.2 6.5E-06 2.2E-10 66.8 10.0 52 93-149 104-155 (166)
88 3kgl_A Cruciferin; 11S SEED gl 98.2 5.2E-06 1.8E-10 77.0 10.6 86 73-159 307-404 (466)
89 1sq4_A GLXB, glyoxylate-induce 98.2 2.8E-06 9.5E-11 73.0 7.6 56 93-153 84-139 (278)
90 3es1_A Cupin 2, conserved barr 98.2 2.4E-06 8.3E-11 69.5 6.6 75 71-160 81-155 (172)
91 3s7i_A Allergen ARA H 1, clone 98.2 5.8E-06 2E-10 75.6 9.7 67 91-159 275-367 (418)
92 3qac_A 11S globulin SEED stora 98.2 9.5E-06 3.3E-10 75.3 11.0 86 73-159 307-404 (465)
93 2ea7_A 7S globulin-1; beta bar 98.1 7.7E-06 2.6E-10 74.9 9.6 68 90-159 277-358 (434)
94 2o1q_A Putative acetyl/propion 98.1 2E-06 6.7E-11 67.3 4.7 79 71-163 46-124 (145)
95 1sq4_A GLXB, glyoxylate-induce 98.1 1.1E-05 3.9E-10 69.2 9.0 68 72-153 194-261 (278)
96 3s7i_A Allergen ARA H 1, clone 98.1 1.2E-05 4.2E-10 73.5 9.6 75 66-153 42-118 (418)
97 2d40_A Z3393, putative gentisa 98.1 6.3E-06 2.2E-10 73.2 7.4 49 92-145 281-329 (354)
98 2cav_A Protein (canavalin); vi 98.0 2.7E-05 9.1E-10 71.6 10.5 68 90-159 292-371 (445)
99 3lag_A Uncharacterized protein 98.0 3.7E-06 1.3E-10 61.6 3.1 62 92-155 30-92 (98)
100 3kgl_A Cruciferin; 11S SEED gl 98.0 1.9E-05 6.5E-10 73.3 8.6 80 67-158 42-181 (466)
101 2ozi_A Hypothetical protein RP 97.9 1.4E-05 4.8E-10 58.8 5.1 62 92-155 30-92 (98)
102 1rc6_A Hypothetical protein YL 97.8 4.2E-05 1.4E-09 64.3 8.0 53 98-155 80-132 (261)
103 3ebr_A Uncharacterized RMLC-li 97.8 4.8E-05 1.6E-09 60.8 7.8 105 69-192 42-154 (159)
104 2q1z_B Anti-sigma factor CHRR, 97.8 4.8E-05 1.6E-09 62.3 7.8 55 91-154 137-191 (195)
105 3es4_A Uncharacterized protein 97.8 6E-05 2E-09 57.9 7.1 52 92-147 54-105 (116)
106 3nw4_A Gentisate 1,2-dioxygena 97.8 4.5E-05 1.5E-09 68.8 7.3 51 92-147 292-342 (368)
107 1sef_A Conserved hypothetical 97.7 6.9E-05 2.4E-09 63.6 7.7 52 97-153 82-133 (274)
108 3gbg_A TCP pilus virulence reg 97.7 0.00012 4E-09 60.8 8.6 63 72-145 10-72 (276)
109 2y0o_A Probable D-lyxose ketol 97.7 7E-05 2.4E-09 61.3 7.0 58 91-148 65-145 (175)
110 4e2q_A Ureidoglycine aminohydr 97.7 7.2E-05 2.4E-09 64.7 6.5 79 72-164 73-152 (266)
111 3fz3_A Prunin; TREE NUT allerg 97.6 0.00014 4.9E-09 68.4 8.1 85 56-156 40-206 (531)
112 3myx_A Uncharacterized protein 97.3 0.0014 4.7E-08 55.9 10.0 47 97-148 63-109 (238)
113 3cjx_A Protein of unknown func 97.3 0.00056 1.9E-08 55.0 7.0 60 71-146 45-104 (165)
114 1sfn_A Conserved hypothetical 97.3 0.00028 9.5E-09 59.1 5.1 42 99-145 68-109 (246)
115 3st7_A Capsular polysaccharide 97.2 0.001 3.4E-08 57.2 8.5 61 92-153 285-350 (369)
116 3o14_A Anti-ecfsigma factor, C 97.2 0.00051 1.7E-08 57.6 6.4 64 72-155 46-109 (223)
117 3bal_A Acetylacetone-cleaving 97.1 0.00069 2.4E-08 54.2 6.0 80 65-159 43-122 (153)
118 3myx_A Uncharacterized protein 96.6 0.0038 1.3E-07 53.1 6.7 47 96-146 183-229 (238)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.4 0.013 4.5E-07 46.0 8.3 60 92-153 48-109 (141)
120 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 95.6 0.043 1.5E-06 45.3 8.1 58 91-148 72-135 (197)
121 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 95.6 0.044 1.5E-06 44.7 7.9 56 92-148 61-128 (185)
122 2ixk_A DTDP-4-dehydrorhamnose 95.3 0.06 2.1E-06 43.9 7.9 56 92-148 62-129 (184)
123 3ejk_A DTDP sugar isomerase; Y 95.3 0.16 5.4E-06 41.1 10.2 56 92-147 66-131 (174)
124 1yud_A Hypothetical protein SO 95.2 0.058 2E-06 43.8 7.5 88 65-164 45-139 (170)
125 1dzr_A DTDP-4-dehydrorhamnose 95.2 0.08 2.7E-06 43.1 8.3 56 92-148 60-128 (183)
126 3kmh_A D-lyxose isomerase; cup 95.2 0.036 1.2E-06 47.5 6.3 58 90-147 117-197 (246)
127 3eqe_A Putative cystein deoxyg 95.2 0.13 4.3E-06 41.4 9.3 70 91-160 81-155 (171)
128 3bb6_A Uncharacterized protein 94.9 0.3 1E-05 37.9 10.4 75 86-160 21-103 (127)
129 3ryk_A DTDP-4-dehydrorhamnose 94.8 0.1 3.5E-06 43.4 8.0 57 92-148 83-151 (205)
130 2gm6_A Cysteine dioxygenase ty 94.8 0.18 6.3E-06 41.5 9.5 71 90-160 90-169 (208)
131 1eyb_A Homogentisate 1,2-dioxy 94.6 0.057 2E-06 50.1 6.5 55 98-157 177-231 (471)
132 2c0z_A NOVW; isomerase, epimer 94.3 0.13 4.5E-06 43.0 7.7 57 92-148 68-136 (216)
133 3o14_A Anti-ecfsigma factor, C 94.0 0.045 1.5E-06 45.7 4.2 48 92-149 159-206 (223)
134 4gjz_A Lysine-specific demethy 93.3 0.35 1.2E-05 38.3 8.2 52 95-146 140-225 (235)
135 2qnk_A 3-hydroxyanthranilate 3 93.1 0.22 7.4E-06 43.5 7.0 52 100-158 227-278 (286)
136 1wlt_A 176AA long hypothetical 93.0 0.52 1.8E-05 38.8 8.9 57 91-148 77-146 (196)
137 1oi6_A PCZA361.16; epimerase, 92.8 0.56 1.9E-05 38.8 8.9 56 92-148 60-128 (205)
138 1upi_A DTDP-4-dehydrorhamnose 92.1 0.81 2.8E-05 38.5 9.1 57 92-148 79-147 (225)
139 2xdv_A MYC-induced nuclear ant 91.7 0.65 2.2E-05 42.4 8.7 55 92-146 153-223 (442)
140 4diq_A Lysine-specific demethy 91.4 2 6.8E-05 40.0 11.7 66 92-157 178-263 (489)
141 3d8c_A Hypoxia-inducible facto 90.8 1 3.6E-05 39.4 8.8 66 93-158 197-298 (349)
142 2vec_A YHAK, pirin-like protei 90.5 0.95 3.3E-05 38.4 8.1 63 92-158 77-143 (256)
143 2qjv_A Uncharacterized IOLB-li 90.5 0.27 9.1E-06 42.6 4.6 50 92-144 168-233 (270)
144 1dgw_X Canavalin; duplicated s 90.5 0.38 1.3E-05 33.9 4.7 40 70-119 37-77 (79)
145 1vrb_A Putative asparaginyl hy 89.6 2.9 0.0001 36.5 10.7 54 92-145 154-241 (342)
146 4hn1_A Putative 3-epimerase in 88.3 3.5 0.00012 34.0 9.6 58 91-148 56-125 (201)
147 1tq5_A Protein YHHW; bicupin, 87.7 2.4 8.1E-05 35.6 8.4 62 92-157 54-119 (242)
148 3eln_A Cysteine dioxygenase ty 87.5 4.8 0.00016 32.8 10.0 71 90-160 81-161 (200)
149 3al5_A HTYW5, JMJC domain-cont 87.5 2 6.9E-05 37.3 8.2 65 94-160 182-277 (338)
150 3uss_A Putative uncharacterize 83.4 9.9 0.00034 31.3 10.0 71 90-160 84-163 (211)
151 1zx5_A Mannosephosphate isomer 82.7 0.56 1.9E-05 40.6 2.3 46 100-145 118-181 (300)
152 1qwr_A Mannose-6-phosphate iso 81.1 0.7 2.4E-05 40.2 2.3 22 123-144 159-180 (319)
153 3k2o_A Bifunctional arginine d 79.8 2.5 8.4E-05 37.2 5.4 27 121-147 255-281 (336)
154 3dl3_A Tellurite resistance pr 79.4 10 0.00035 28.9 8.1 72 89-161 26-102 (119)
155 2oyz_A UPF0345 protein VPA0057 78.8 6.5 0.00022 28.8 6.5 46 99-147 41-86 (94)
156 2rg4_A Uncharacterized protein 78.3 3.1 0.00011 34.0 5.2 56 89-144 113-191 (216)
157 2wfp_A Mannose-6-phosphate iso 77.8 1.2 4.2E-05 39.9 2.9 23 123-145 241-263 (394)
158 1xru_A 4-deoxy-L-threo-5-hexos 76.8 7.8 0.00027 33.6 7.5 55 92-148 196-255 (282)
159 1qwr_A Mannose-6-phosphate iso 73.7 14 0.00047 32.0 8.4 37 98-139 268-304 (319)
160 2qdr_A Uncharacterized protein 73.5 6 0.0002 34.5 5.9 50 96-161 235-291 (303)
161 1dgw_Y Canavalin; duplicated s 72.2 11 0.00038 27.3 6.3 36 122-159 6-41 (93)
162 2qdr_A Uncharacterized protein 71.1 2.8 9.5E-05 36.6 3.3 51 94-156 106-159 (303)
163 2p17_A Pirin-like protein; GK1 70.9 20 0.00069 30.4 8.6 62 92-157 52-116 (277)
164 3kv4_A PHD finger protein 8; e 70.3 5.8 0.0002 36.3 5.4 28 120-147 299-326 (447)
165 2xxz_A Lysine-specific demethy 70.1 5.2 0.00018 35.4 4.9 42 121-164 278-319 (332)
166 1pmi_A PMI, phosphomannose iso 69.1 2.7 9.1E-05 38.4 2.9 23 123-145 267-289 (440)
167 3k3o_A PHF8, PHD finger protei 68.2 5 0.00017 36.0 4.4 29 119-147 214-242 (371)
168 1ywk_A 4-deoxy-L-threo-5-hexos 68.1 12 0.0004 32.6 6.6 49 92-141 196-249 (289)
169 1zx5_A Mannosephosphate isomer 67.9 15 0.00052 31.5 7.3 49 101-157 250-298 (300)
170 3pua_A GRC5, PHD finger protei 67.7 5 0.00017 36.3 4.4 28 120-147 242-269 (392)
171 3eo6_A Protein of unknown func 66.8 11 0.00037 28.2 5.3 43 100-145 55-97 (106)
172 2pqq_A Putative transcriptiona 66.6 18 0.00062 25.4 6.5 59 99-157 46-108 (149)
173 2yu1_A JMJC domain-containing 66.3 6.8 0.00023 35.9 5.0 28 120-147 264-291 (451)
174 3pur_A Lysine-specific demethy 66.0 5.4 0.00019 37.5 4.3 29 119-147 363-391 (528)
175 2wfp_A Mannose-6-phosphate iso 65.3 16 0.00055 32.6 7.2 53 97-157 340-392 (394)
176 3hqx_A UPF0345 protein aciad03 64.3 23 0.00079 26.6 6.8 45 100-147 58-102 (111)
177 3loi_A Putative uncharacterize 64.1 16 0.00054 29.4 6.2 54 91-144 65-126 (172)
178 1xe7_A YML079WP, hypothetical 63.8 26 0.00089 28.8 7.6 55 91-145 92-152 (203)
179 3kv5_D JMJC domain-containing 62.3 7.2 0.00025 36.0 4.4 54 94-147 281-361 (488)
180 2fmy_A COOA, carbon monoxide o 62.0 37 0.0013 25.9 7.9 53 99-156 45-98 (220)
181 1j1l_A Pirin; beta sandwich, c 61.4 25 0.00087 30.0 7.5 62 92-157 53-118 (290)
182 3kv9_A JMJC domain-containing 61.0 8.1 0.00028 34.9 4.4 28 120-147 243-270 (397)
183 3avr_A Lysine-specific demethy 59.5 10 0.00035 35.6 4.9 42 122-165 338-379 (531)
184 3dn7_A Cyclic nucleotide bindi 59.2 23 0.00077 26.5 6.1 58 99-156 48-110 (194)
185 1pmi_A PMI, phosphomannose iso 59.1 27 0.00091 31.7 7.5 57 98-157 378-438 (440)
186 3mdp_A Cyclic nucleotide-bindi 58.9 18 0.00061 25.3 5.2 85 56-155 19-110 (142)
187 3idb_B CAMP-dependent protein 58.4 46 0.0016 24.0 7.6 34 99-133 79-113 (161)
188 4ask_A Lysine-specific demethy 58.4 6.3 0.00021 36.9 3.2 24 121-144 312-335 (510)
189 1ft9_A Carbon monoxide oxidati 57.7 44 0.0015 25.5 7.8 34 99-133 41-75 (222)
190 3dv8_A Transcriptional regulat 55.3 44 0.0015 25.2 7.3 85 56-155 16-106 (220)
191 3b02_A Transcriptional regulat 54.2 37 0.0013 25.5 6.6 58 99-156 17-77 (195)
192 3i3q_A Alpha-ketoglutarate-dep 53.5 13 0.00046 30.3 4.2 40 103-142 135-176 (211)
193 2lcj_A PAB POLC intein; hydrol 52.9 45 0.0015 26.0 7.1 27 103-136 95-121 (185)
194 2oz6_A Virulence factor regula 51.7 35 0.0012 25.5 6.1 36 99-134 31-67 (207)
195 3gyd_A CNMP-BD protein, cyclic 51.4 40 0.0014 25.4 6.4 35 99-133 80-115 (187)
196 2ypd_A Probable JMJC domain-co 50.7 17 0.00059 32.9 4.7 39 122-160 293-331 (392)
197 3opt_A DNA damage-responsive t 50.2 18 0.00062 32.5 4.8 52 121-174 304-355 (373)
198 3ryp_A Catabolite gene activat 49.6 40 0.0014 25.3 6.2 57 99-155 37-98 (210)
199 4ev0_A Transcription regulator 47.6 38 0.0013 25.5 5.7 57 99-155 40-100 (216)
200 3fx3_A Cyclic nucleotide-bindi 47.1 40 0.0014 26.0 5.9 63 56-133 24-87 (237)
201 2bgc_A PRFA; bacterial infecti 47.0 40 0.0014 26.2 6.0 37 99-135 36-72 (238)
202 3iwz_A CAP-like, catabolite ac 45.4 42 0.0014 25.5 5.7 63 56-133 24-87 (230)
203 3d0s_A Transcriptional regulat 45.1 44 0.0015 25.5 5.8 58 99-156 47-108 (227)
204 3kcc_A Catabolite gene activat 44.1 49 0.0017 26.3 6.2 57 99-155 87-148 (260)
205 1uhe_A Aspartate 1-decarboxyla 43.0 5.1 0.00017 29.6 -0.0 29 103-135 32-62 (97)
206 1znp_A Hypothetical protein AT 42.9 40 0.0014 26.6 5.2 71 65-145 36-114 (154)
207 1o5l_A Transcriptional regulat 41.9 50 0.0017 25.2 5.7 57 99-155 40-101 (213)
208 3tht_A Alkylated DNA repair pr 41.6 22 0.00075 31.2 3.9 39 103-141 227-265 (345)
209 2zcw_A TTHA1359, transcription 40.9 42 0.0014 25.2 5.1 56 100-155 26-84 (202)
210 4ava_A Lysine acetyltransferas 40.1 47 0.0016 27.2 5.5 34 99-132 54-87 (333)
211 2z69_A DNR protein; beta barre 40.0 20 0.0007 25.3 2.9 35 99-133 53-88 (154)
212 3e97_A Transcriptional regulat 39.9 75 0.0026 24.2 6.4 63 56-133 19-82 (231)
213 1zyb_A Transcription regulator 39.2 44 0.0015 25.8 5.1 88 56-156 31-123 (232)
214 3la7_A Global nitrogen regulat 38.7 60 0.002 25.3 5.8 35 99-133 61-96 (243)
215 2lj0_A Sorbin and SH3 domain-c 38.0 15 0.00053 24.2 1.8 37 123-166 22-58 (65)
216 2a1x_A Phytanoyl-COA dioxygena 37.3 42 0.0014 27.7 4.9 46 119-164 213-261 (308)
217 3e6c_C CPRK, cyclic nucleotide 36.8 63 0.0022 25.2 5.7 35 99-133 50-85 (250)
218 2lok_A Uncharacterized protein 36.4 1.1E+02 0.0038 24.9 7.1 80 28-135 33-116 (197)
219 2ptm_A Hyperpolarization-activ 35.9 53 0.0018 24.7 4.9 31 99-132 112-142 (198)
220 2iuw_A Alkylated repair protei 35.5 41 0.0014 27.6 4.5 38 103-140 158-205 (238)
221 3m3i_A Putative uncharacterize 35.0 1.4E+02 0.0047 25.0 7.5 69 66-144 57-160 (225)
222 3pna_A CAMP-dependent protein 35.0 81 0.0028 22.5 5.6 31 99-133 79-109 (154)
223 2gau_A Transcriptional regulat 32.8 48 0.0016 25.4 4.2 85 56-155 23-111 (232)
224 2qjv_A Uncharacterized IOLB-li 32.5 1.6E+02 0.0055 25.0 7.8 70 65-147 25-102 (270)
225 2opw_A Phyhd1 protein; double- 32.3 43 0.0015 27.3 4.1 40 120-159 226-268 (291)
226 2qcs_B CAMP-dependent protein 31.4 1E+02 0.0034 24.4 6.1 34 100-133 199-234 (291)
227 3dxt_A JMJC domain-containing 31.2 57 0.002 29.0 4.9 47 120-168 260-306 (354)
228 2rdq_A 1-deoxypentalenic acid 30.9 42 0.0014 27.3 3.7 41 119-159 208-254 (288)
229 2lqo_A Putative glutaredoxin R 30.4 1E+02 0.0034 21.4 5.2 42 35-78 21-63 (92)
230 2lnu_A Uncharacterized protein 30.0 1.3E+02 0.0043 24.4 6.4 80 28-135 26-111 (190)
231 4f8a_A Potassium voltage-gated 29.9 1.1E+02 0.0037 21.5 5.5 33 99-135 68-100 (160)
232 3shr_A CGMP-dependent protein 28.2 1E+02 0.0035 24.6 5.6 56 100-155 199-259 (299)
233 3g7d_A PHPD; non heme Fe(II) d 27.8 1.9E+02 0.0065 26.1 7.5 40 103-143 358-397 (443)
234 2ox0_A JMJC domain-containing 27.8 70 0.0024 28.7 4.9 44 120-165 278-321 (381)
235 2d93_A RAP guanine nucleotide 27.5 1.1E+02 0.0037 21.1 5.1 52 100-155 59-114 (134)
236 2qfe_A Calpain-7; C2-like doma 27.3 40 0.0014 25.8 2.8 33 123-160 109-141 (148)
237 3s57_A Alpha-ketoglutarate-dep 26.9 47 0.0016 26.6 3.3 38 103-140 132-178 (204)
238 3bpz_A Potassium/sodium hyperp 26.2 62 0.0021 24.4 3.8 54 99-156 113-169 (202)
239 2cw8_A Endonuclease PI-pkoii; 25.6 62 0.0021 29.7 4.3 16 126-141 114-129 (537)
240 2fpe_A C-JUN-amino-terminal ki 24.5 24 0.00084 22.2 1.0 36 124-166 20-55 (62)
241 3rnj_A Brain-specific angiogen 24.0 33 0.0011 21.9 1.5 37 124-166 25-61 (67)
242 2jmz_A Hypothetical protein MJ 23.6 41 0.0014 26.3 2.3 30 103-139 105-134 (186)
243 1vc3_B L-aspartate-alpha-decar 23.5 15 0.0005 27.1 -0.3 29 103-135 33-64 (96)
244 4dsd_A Putative periplasmic pr 23.2 1.2E+02 0.0041 22.5 4.8 55 72-129 3-70 (129)
245 1yll_A PA5104, conserved hypot 23.0 1E+02 0.0034 25.0 4.6 55 98-156 139-196 (200)
246 2j05_A RAS GTPase-activating p 22.6 40 0.0014 21.4 1.7 36 124-166 23-58 (65)
247 1wgp_A Probable cyclic nucleot 22.2 16 0.00054 25.6 -0.4 33 99-132 47-82 (137)
248 1aba_A Glutaredoxin; electron 22.0 1.5E+02 0.005 19.4 4.6 53 35-87 21-82 (87)
249 3tnp_B CAMP-dependent protein 21.9 1.7E+02 0.0057 25.4 6.2 34 100-133 187-220 (416)
250 3plx_B Aspartate 1-decarboxyla 21.9 17 0.00058 27.0 -0.3 30 103-136 33-64 (102)
251 1o7f_A CAMP-dependent RAP1 gua 21.7 1.8E+02 0.0061 24.9 6.3 57 99-155 83-144 (469)
252 2fi9_A Outer membrane protein; 21.7 40 0.0014 25.2 1.8 29 106-142 20-48 (128)
253 2fct_A Syringomycin biosynthes 21.5 66 0.0022 26.5 3.3 40 120-159 218-262 (313)
254 3oug_A Aspartate 1-decarboxyla 21.3 21 0.00072 27.0 0.1 29 103-135 60-91 (114)
255 1vp6_A CNBD, cyclic-nucleotide 21.1 61 0.0021 22.4 2.6 29 99-133 52-80 (138)
256 3h0h_A Proto-oncogene tyrosine 20.8 36 0.0012 22.0 1.2 11 124-134 32-42 (73)
257 4e6r_A Cytoplasmic protein NCK 20.6 35 0.0012 20.9 1.1 11 124-134 18-28 (58)
258 3ocp_A PRKG1 protein; serine/t 20.4 1.9E+02 0.0065 19.9 5.2 31 99-133 64-94 (139)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=7.5e-55 Score=363.61 Aligned_cols=178 Identities=64% Similarity=1.146 Sum_probs=170.6
Q ss_pred hheeeEEecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCCCccChHHHHHHHHhcCCCeeeeEEECCCCCCChHH
Q 029255 7 EVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEE 86 (196)
Q Consensus 7 ~m~~aw~~~~~~~~~~l~~~~~p~~~v~~~~L~~~GV~~~~~~~~~~~~~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~ 86 (196)
-||+|||||++++|||+||+++|+++||+++|+++||+||+++++.++.+.+|++|++++||.+.|+++++++++||+++
T Consensus 12 ~~~~~~~~~~~~~d~~~ph~~~~~~~v~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~~~ 91 (191)
T 1vr3_A 12 HMVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEE 91 (191)
T ss_dssp -CCEEEEBCSCCSCTTSCCBCSSCCBCCHHHHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHH
T ss_pred hhheeeeccCCccccCcccccCCCCccCHHHHHhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcchhh
Confidence 59999999999999999999999999999999999999999988766678899999999999999999999997799999
Q ss_pred HhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeecC
Q 029255 87 KIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 166 (196)
Q Consensus 87 ~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~~ 166 (196)
|+++|+.+|+|+++|++||++|+|+|.+++.+++|+++.|++||+|+||+|++|||++++++++++||||.+++||+|++
T Consensus 92 k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~~~ 171 (191)
T 1vr3_A 92 KIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYN 171 (191)
T ss_dssp HHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCCEE
T ss_pred hhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccCCC
Confidence 99999999999999999999999999999766889999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHhh
Q 029255 167 RPHDHLPARKGYVQNFLQ 184 (196)
Q Consensus 167 r~~d~~~~r~~yl~~~~~ 184 (196)
||+|++++|++||++|..
T Consensus 172 r~~~~~~~r~~y~~~~~~ 189 (191)
T 1vr3_A 172 RPADHFDARVQYMSFLEG 189 (191)
T ss_dssp SCCTTSHHHHHHHHHHHH
T ss_pred CchhccHHHHHHHHHhhh
Confidence 999999999999999874
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=100.00 E-value=1.3e-36 Score=250.90 Aligned_cols=157 Identities=24% Similarity=0.437 Sum_probs=133.8
Q ss_pred ecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCC-----Ccc-------ChHHHHHHHHhcCCCeeeeEEECCCCC
Q 029255 14 MDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDAD-----NYE-------TDEELKKIREDRGYSYMDFCEVCPEKL 81 (196)
Q Consensus 14 ~~~~~~~~~l~~~~~p~~~v~~~~L~~~GV~~~~~~~~-----~~~-------~~~~i~~l~~~rGy~~~Dvv~l~p~~~ 81 (196)
++++.+...+....+++.+ +++|+++||+||+++++ ..+ |+.+|++|++++||+++|+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~i--~~~L~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~- 82 (179)
T 1zrr_A 6 FSVKDPQNSLWHSTNAEEI--QQQLNAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN- 82 (179)
T ss_dssp ECSSCSSCEEEEECCSHHH--HHHHHHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-
T ss_pred ecCCCcCCcceeeCCHHHH--HHHHHHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-
Confidence 3444444444455566666 79999999999555542 111 45689999999999999999999985
Q ss_pred CChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCc
Q 029255 82 PNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 161 (196)
Q Consensus 82 p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~g 161 (196)
|++++|+++|+.+|+|+++|++||++|+|+|.++ .+++|+++.|++||+|+||+|++|||+++++++++|||||.+++|
T Consensus 83 p~~~~~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~ 161 (179)
T 1zrr_A 83 PQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEG 161 (179)
T ss_dssp THHHHHHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGG
T ss_pred CChhHhhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCC
Confidence 9999999999999999999999999999999998 678899999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCchhH
Q 029255 162 WTPFNRPHDHLPAR 175 (196)
Q Consensus 162 W~~~~r~~d~~~~r 175 (196)
|+|++|. ++++.|
T Consensus 162 w~~~~~g-~~ia~~ 174 (179)
T 1zrr_A 162 WIAQFTG-DDIASA 174 (179)
T ss_dssp EESCSSC-CCSGGG
T ss_pred ccccCCC-chhHhh
Confidence 9998774 555544
No 3
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.99 E-value=1.8e-09 Score=76.37 Aligned_cols=63 Identities=17% Similarity=0.253 Sum_probs=52.4
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
..+|.|.. +|+.||++|++.+.+. ++ .+.+++||++.+|+|+.|++....+..+..+-++..+
T Consensus 41 ~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 41 QKVHVHEGSDKVYYALEGEVVVRVG---EE--EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp EEEECCSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred CCccCCCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 46899996 7999999999999985 44 4789999999999999999987665567777776653
No 4
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.99 E-value=1.7e-09 Score=80.56 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=61.9
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCc
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 149 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~ 149 (196)
.-.+++.|+. ...+|.|.. +|++||++|++.+.+. +++ .+.+++||+|.+|+|+.|++....+..
T Consensus 41 ~~~~~~~pg~----------~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~ 106 (125)
T 3h8u_A 41 VVVWHAHPGQ----------EIASHVHPHGQDTWTVISGEAEYHQG--NGI--VTHLKAGDIAIAKPGQVHGAMNSGPEP 106 (125)
T ss_dssp EEEEEECTTC----------EECCC-CTTCEEEEEEEECEEEEECS--TTC--EEEEETTEEEEECTTCCCEEEECSSSC
T ss_pred EEEEEECCCC----------cCCcccCCCCeEEEEEEEeEEEEEEC--CCe--EEEeCCCCEEEECCCCEEEeEeCCCCC
Confidence 3456666653 367999996 8999999999999883 344 478999999999999999998876666
Q ss_pred EEEEEEecCC-Cceeec
Q 029255 150 IKAMRLFVGD-PVWTPF 165 (196)
Q Consensus 150 ~~alRlF~~~-~gW~~~ 165 (196)
+..+-++... +++.+.
T Consensus 107 ~~~l~v~~p~~~~~~~~ 123 (125)
T 3h8u_A 107 FIFVSVVAPGNAGFALA 123 (125)
T ss_dssp EEEEEEEESTTCCCCCC
T ss_pred EEEEEEECCCcccchhh
Confidence 7888777764 555543
No 5
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.93 E-value=6.3e-09 Score=84.79 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=56.7
Q ss_pred ccccccCc---ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTD---EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~---dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
...|.|.. +|++||++|++.+.+.+..++++.+.+++||+|+||+|+.|++....+..++.+-++...
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 45788863 799999999999999876677888999999999999999999987666567777666553
No 6
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.90 E-value=3.4e-09 Score=79.22 Aligned_cols=62 Identities=18% Similarity=0.252 Sum_probs=50.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
..+|.|..+|+.||++|++.+.+. ++ ...+++||.|.||+|+.|++...++..+..+-+|..
T Consensus 49 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 49 VGSHSVAGPSTIQCLEGEVEIGVD---GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp EEEECCSSCEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred cCceeCCCcEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 678999999999999999999995 44 478999999999999999999876644545444433
No 7
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.88 E-value=4.4e-09 Score=77.64 Aligned_cols=65 Identities=9% Similarity=0.096 Sum_probs=53.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEE-EEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCc
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRI-WVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 161 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i-~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~g 161 (196)
..+|.|...|+.||++|++.+.+. ++. . .+++||+|.+|+|+.|++....+..+..+-++...+.
T Consensus 40 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 40 MPKHYSNSYVHLIIIKGEMTLTLE---DQE--PHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp CCCEECSSCEEEEEEESEEEEEET---TSC--CEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGG
T ss_pred CCCEeCCCcEEEEEEeCEEEEEEC---CEE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCC
Confidence 568999999999999999999995 332 4 8999999999999999998866666677766555444
No 8
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.87 E-value=6.5e-09 Score=77.34 Aligned_cols=72 Identities=18% Similarity=0.295 Sum_probs=57.4
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcE
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 150 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~ 150 (196)
.-.+++.|+. ...+|.|..+|+.||++|++.+.+. ++ ...+++||++.||+|+.|++....+ ..
T Consensus 43 ~~~~~~~pg~----------~~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~ 106 (126)
T 4e2g_A 43 LNWVRIEPNT----------EMPAHEHPHEQAGVMLEGTLELTIG---EE--TRVLRPGMAYTIPGGVRHRARTFED-GC 106 (126)
T ss_dssp EEEEEECTTC----------EEEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTEEEEECTTCCEEEECCTT-CE
T ss_pred EEEEEECCCC----------cCCCccCCCceEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEECCC-CE
Confidence 3456666653 2578999999999999999999985 44 4789999999999999999987655 46
Q ss_pred EEEEEecC
Q 029255 151 KAMRLFVG 158 (196)
Q Consensus 151 ~alRlF~~ 158 (196)
..+-+|..
T Consensus 107 ~~l~v~~p 114 (126)
T 4e2g_A 107 LVLDIFSP 114 (126)
T ss_dssp EEEEEEES
T ss_pred EEEEEECC
Confidence 66766653
No 9
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.84 E-value=1e-08 Score=84.13 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=48.3
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 90 NFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 90 ~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
..+.+|.|+.||+||+++|+..+.+++. ++.-.+.+++||+++||+|++|+....+
T Consensus 46 ~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 46 HRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4589999999999999999999999953 4344699999999999999999986543
No 10
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.84 E-value=1.6e-08 Score=82.68 Aligned_cols=82 Identities=20% Similarity=0.201 Sum_probs=63.8
Q ss_pred CCCeeeeEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCC---CeEEEEEEecCCEEEeCCCCeeee
Q 029255 67 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN---EKWIRIWVKKGGMIVLPAGCYHRF 142 (196)
Q Consensus 67 Gy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~---d~~~~i~~~~GDlI~VPaG~~H~F 142 (196)
|+ ..-.+.+.|.. ...+|.|+. +|+.||++|++.+.+.+.+ ++.+...+++||++++|+|+.|++
T Consensus 71 ~~-~~~~~~l~pg~----------~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~ 139 (201)
T 1fi2_A 71 GV-SMNRVDFAPGG----------TNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQ 139 (201)
T ss_dssp SC-EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEE
T ss_pred ce-EEEEEEECCCC----------CCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEE
Confidence 44 33456677653 257899996 7999999999999997543 666678999999999999999999
Q ss_pred eecCCCcEEEEEEecCC
Q 029255 143 TLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 143 ~~~~~~~~~alRlF~~~ 159 (196)
....+..+..+-+|...
T Consensus 140 ~N~g~~~~~~l~v~~~~ 156 (201)
T 1fi2_A 140 FNVGKTEAYMVVSFNSQ 156 (201)
T ss_dssp EECSSSCEEEEEEESSS
T ss_pred EeCCCCCEEEEEEECCC
Confidence 86555567777777654
No 11
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.84 E-value=1.1e-08 Score=73.70 Aligned_cols=62 Identities=18% Similarity=0.247 Sum_probs=51.4
Q ss_pred cccc--ccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 92 FEEH--LHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 92 ~~eH--~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
..+| .|. .+|+.||++|++.+.+. ++ ...+++||++.||+|+.|++....+..+..+-++..
T Consensus 34 ~~~h~~~H~~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 34 EGGPDNRHRGADQWLFVVDGAGEAIVD---GH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EECCCSSSCCCEEEEEEEECCEEEEET---TE--EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred cCCcccccCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 4567 999 79999999999999984 44 478999999999999999998766555677766654
No 12
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.83 E-value=8.1e-09 Score=77.89 Aligned_cols=63 Identities=21% Similarity=0.213 Sum_probs=51.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
+.+|.|+..|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+..+..+-++..+
T Consensus 61 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 61 IDRHSHPWEHEIFVLKGKLTVLKE---QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKE 123 (126)
T ss_dssp EEEECCSSCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGG
T ss_pred CCceeCCCcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 568999999999999999999985 44 3689999999999999999987655556666665543
No 13
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.83 E-value=1.6e-08 Score=75.46 Aligned_cols=60 Identities=17% Similarity=0.338 Sum_probs=50.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEe
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF 156 (196)
...|.|...|+.||++|++.+.+. ++ ...+++||+++||+|+.|++....+..+..+-++
T Consensus 47 ~~~H~H~~~Ei~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~ 106 (128)
T 4i4a_A 47 SFRHSHNEYELFIVIQGNAIIRIN---DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW 106 (128)
T ss_dssp CCCBCCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred cCCEecCCeEEEEEEeCEEEEEEC---CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 678999999999999999999995 44 4789999999999999999987655545554443
No 14
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.83 E-value=2.5e-08 Score=77.22 Aligned_cols=68 Identities=16% Similarity=0.289 Sum_probs=54.5
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
..+|.|.. +|++||++|++.+.+.+..+ .++++.+++||+|.||+|+.|++....+..+..+-++...
T Consensus 56 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 56 IGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp CCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred cCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 56899985 69999999999999984422 1345789999999999999999987666567777666554
No 15
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.82 E-value=1.3e-08 Score=76.81 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=57.0
Q ss_pred cCCCeeeeEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeee
Q 029255 66 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 66 rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
.|....-++.+... |+ ....+|.|.. +|+.||++|++.+.+. +++ .+.+++||+++||+|+.|++..
T Consensus 38 ~g~~~~~~~~~~~~--~g------~~~~~H~H~~~~E~~~vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 38 GGMFGAHVIRAIPG--KE------AKPTWHTHTVGFQLFYVLRGWVEFEYE--DIG--AVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp TTSCEEEEEEECC-------------CCCEEECCSCEEEEEEESEEEEEET--TTE--EEEEETTCEEECCTTCCEEEEE
T ss_pred CCceEEEEEEEecC--CC------CCCCCEECCCCcEEEEEEeCEEEEEEC--CcE--EEEecCCCEEEECCCCcEEeEe
Confidence 34444457777632 21 2257999998 9999999999999995 214 4789999999999999999987
Q ss_pred cCCCcEEEEEEecC
Q 029255 145 DTDNYIKAMRLFVG 158 (196)
Q Consensus 145 ~~~~~~~alRlF~~ 158 (196)
..+. ...+-++..
T Consensus 106 ~~~~-~~~l~~~~p 118 (134)
T 2o8q_A 106 HSDD-LEVLEIVSP 118 (134)
T ss_dssp ECTT-CEEEEEESS
T ss_pred CCCC-eEEEEEECC
Confidence 5443 355545544
No 16
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.82 E-value=8.4e-09 Score=75.78 Aligned_cols=51 Identities=12% Similarity=0.181 Sum_probs=44.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
...|.|+.+|+.||++|++.+.+. ++ ...+++||+|.+|+|+.|.+...++
T Consensus 51 ~~~H~h~~~e~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~~~ 101 (114)
T 2ozj_A 51 VSEEEYFGDTLYLILQGEAVITFD---DQ--KIDLVPEDVLMVPAHKIHAIAGKGR 101 (114)
T ss_dssp CCCBCCSSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCCBEEEEEEE
T ss_pred cccEECCCCeEEEEEeCEEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 468999999999999999999995 44 4689999999999999999987643
No 17
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.81 E-value=1.4e-08 Score=74.16 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=48.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEe
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF 156 (196)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+ .+.+-++
T Consensus 53 ~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~~v~ 110 (115)
T 1yhf_A 53 IGRHSSPGDAMVTILSGLAEITID---QE--TYRVAEGQTIVMPAGIPHALYAVEA--FQMLLVV 110 (115)
T ss_dssp EEEECCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTSCEEEEESSC--EEEEEEE
T ss_pred cCCEECCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECCC--ceEEEEE
Confidence 568999999999999999999985 44 3689999999999999999988664 3444333
No 18
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.81 E-value=1.5e-08 Score=74.12 Aligned_cols=60 Identities=18% Similarity=0.149 Sum_probs=50.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
...|.|+.+|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+ ...+-+|..
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~v~~p 106 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVD---GV--IKVLTAGDSFFVPPHVDHGAVCPTG--GILIDTFSP 106 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEESSC--EEEEEEEES
T ss_pred CCcEECCcceEEEEEeeEEEEEEC---CE--EEEeCCCCEEEECcCCceeeEeCCC--cEEEEEECC
Confidence 568999999999999999999984 44 4789999999999999999987653 466666654
No 19
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.81 E-value=1.7e-08 Score=79.14 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=53.9
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----CeEEEEEEecCCEEEeCCCCeeeeeecC-CCcEEEEEEecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRN----EKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~----d~~~~i~~~~GDlI~VPaG~~H~F~~~~-~~~~~alRlF~~~ 159 (196)
...|.|..+|+.||++|++.+.+.+.+ ++.-.+.+++||+|.||+|+.|++.... +..+..+-++...
T Consensus 54 ~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 126 (163)
T 1lr5_A 54 TPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRP 126 (163)
T ss_dssp CCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESS
T ss_pred CCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCC
Confidence 568999999999999999999997421 1112578999999999999999998765 5556777666554
No 20
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.81 E-value=6.6e-09 Score=73.95 Aligned_cols=51 Identities=27% Similarity=0.420 Sum_probs=44.8
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 91 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 91 f~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
.+.+|.|+. +|+.||++|++.+.+. ++ ...+++||+++||+|+.|++....
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAFR---DQ--NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEEC---CE--EEEEcCCCEEEECCCCeEeeEcCC
Confidence 368999998 9999999999999985 33 468999999999999999998763
No 21
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.79 E-value=1.7e-08 Score=76.35 Aligned_cols=63 Identities=21% Similarity=0.199 Sum_probs=53.2
Q ss_pred ccccccCcceEEEEEeceEEEE--EEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFD--VRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~--v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
..+|.|...|+.||++|++.+. +. ++ .+.+++||++.||+|+.|++....+..+..+-++...
T Consensus 52 ~~~H~H~~~e~~~vl~G~~~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 52 TPPHFHEWEHEIYVLEGSMGLVLPDQ---GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp CCCEECSSCEEEEEEEECEEEEEGGG---TE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred CCCccCCCceEEEEEEeEEEEEEeEC---CE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 6799999999999999999999 64 44 4789999999999999999988766667777776554
No 22
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.77 E-value=1.3e-08 Score=81.35 Aligned_cols=64 Identities=8% Similarity=0.121 Sum_probs=53.5
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC-CCcEEEEEEecCC
Q 029255 91 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRLFVGD 159 (196)
Q Consensus 91 f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~-~~~~~alRlF~~~ 159 (196)
....|.|..+|+.||++|++.+.+. ++ ...+++||+|.||+|+.|++.... +..+..+-++...
T Consensus 68 ~~~~H~H~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 68 YTTLERHEHTHVVMVVRGHAEVVLD---DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp BCCCBBCSSCEEEEEEESEEEEEET---TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CCCCccCCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 3578999999999999999999985 55 478999999999999999998766 6566777666554
No 23
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.77 E-value=1.4e-08 Score=85.97 Aligned_cols=66 Identities=29% Similarity=0.336 Sum_probs=55.3
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCC
Q 029255 90 NFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 160 (196)
Q Consensus 90 ~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~ 160 (196)
..+.+|.|..+|++|||+|++.|.+. +++| ..+++||.|.+|+|+.|+.++++.+ +.++-+..+.+
T Consensus 143 ~~yP~HsHp~EEiy~VLsG~~e~~v~--~g~~--~~l~pGd~v~ipsgv~Ha~rt~deP-llalwvW~G~~ 208 (217)
T 4b29_A 143 LDYGWHEHLPEELYSVVSGRALFHLR--NAPD--LMLEPGQTRFHPANAPHAMTTLTDP-ILTLVLWRGAG 208 (217)
T ss_dssp CEEEEEECSSEEEEEEEEECEEEEET--TSCC--EEECTTCEEEECTTCCEEEECCSSC-EEEEEEEESTT
T ss_pred CcCCCCCCCCceEEEEEeCCEEEEEC--CCCE--EecCCCCEEEcCCCCceeEEECCcc-EEEEEEEeCCC
Confidence 34999999999999999999999995 4555 6799999999999999999976654 67776666644
No 24
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.75 E-value=3.9e-08 Score=76.82 Aligned_cols=79 Identities=19% Similarity=0.271 Sum_probs=62.5
Q ss_pred eeEEECCCCCCChHHHhhcccccccc-CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC-CeeeeeecCCCc
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLH-TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG-CYHRFTLDTDNY 149 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H-~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG-~~H~F~~~~~~~ 149 (196)
-.+++.|+. ....+|.| ..+|++||++|++.+.+. ++ .+.+++||.|.+|+| +.|++....+..
T Consensus 49 ~~~~l~pg~---------~~~~~H~H~~~~E~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~ 114 (162)
T 3l2h_A 49 HLIQIEPGK---------ESTEYHLHHYEEEAVYVLSGKGTLTME---ND--QYPIAPGDFVGFPCHAAAHSISNDGTET 114 (162)
T ss_dssp EEEEECTTC---------BSSSSBEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCCEEEECCSSSC
T ss_pred EEEEECCCC---------cCCCCccCCCCCEEEEEEEEEEEEEEC---CE--EEEeCCCCEEEECCCCceEEeEeCCCCC
Confidence 446677663 13578999 679999999999999985 45 378999999999998 999998766666
Q ss_pred EEEEEEecCCCceee
Q 029255 150 IKAMRLFVGDPVWTP 164 (196)
Q Consensus 150 ~~alRlF~~~~gW~~ 164 (196)
+..+-++...+.-+.
T Consensus 115 ~~~l~v~~p~~~~~~ 129 (162)
T 3l2h_A 115 LVCLVIGQRLDQDVV 129 (162)
T ss_dssp EEEEEEEECCSEEEE
T ss_pred EEEEEEECCCCCCeE
Confidence 888888877665443
No 25
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.74 E-value=9.1e-09 Score=74.95 Aligned_cols=50 Identities=22% Similarity=0.401 Sum_probs=41.9
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
+.+|.|+. +|+.||++|++.+.+. +++ .+.+++||++.+|+|+.|++...
T Consensus 40 ~~~H~H~~~~E~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 40 YGWHTHGYSDKVLFAVEGDMAVDFA--DGG--SMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp CCCBCC--CCEEEEESSSCEEEEET--TSC--EEEECTTEEEEECTTCCEEEEEE
T ss_pred CcceeCCCCCEEEEEEeCEEEEEEC--CCc--EEEECCCCEEEECCCCcEeeEeC
Confidence 45899998 9999999999999996 214 47899999999999999999874
No 26
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.74 E-value=2.2e-08 Score=79.60 Aligned_cols=65 Identities=15% Similarity=0.184 Sum_probs=55.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCc
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 161 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~g 161 (196)
...|.|..+|+.||++|++.+.+. ++ ...+++||+|.||+|+.|.+....+..+..+-++..+..
T Consensus 57 ~~~H~H~~~E~~~Vl~G~~~v~v~---g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 57 STLERHAHVHAVMIHRGHGQCLVG---ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARD 121 (156)
T ss_dssp CCCBBCSSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSCC
T ss_pred cCceeCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCC
Confidence 568999999999999999999984 55 478999999999999999998766666777777766543
No 27
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.73 E-value=3.5e-08 Score=76.88 Aligned_cols=64 Identities=20% Similarity=0.291 Sum_probs=53.2
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
..+|.|...|+.||++|++.+.+. ++. ...+++||+|.+|+|+.|++....+..+..+-++...
T Consensus 61 ~~~H~H~~~E~~~Vl~G~~~~~~~---~~~-~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~~ 124 (147)
T 2f4p_A 61 THWHSHPGGQILIVTRGKGFYQER---GKP-ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQV 124 (147)
T ss_dssp ECSEECTTCEEEEEEEEEEEEEET---TSC-CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECCG
T ss_pred cCceECCCceEEEEEeCEEEEEEC---CEE-EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 468999999999999999999985 331 1579999999999999999998776667777777653
No 28
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.73 E-value=1.7e-08 Score=80.30 Aligned_cols=92 Identities=17% Similarity=0.194 Sum_probs=64.5
Q ss_pred hhccccccccCc-ceEEEEEeceEEEEEEeCCCe---EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC-Cce
Q 029255 88 IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD-PVW 162 (196)
Q Consensus 88 ~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d~---~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~-~gW 162 (196)
+..+-..|.|.+ ||+|++++|++...+++.++. --.+.+++|++++||.|+.|+..+.++ ++.| |+-+. .|=
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e--~~vL-LiEp~nTGd 114 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKD--TKMM-YVQDSNCSM 114 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTT--CEEE-EEEESCCCG
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCc--eEEE-EEEeCCCCC
Confidence 456678999986 999999999999999954210 125899999999999999999999766 3444 34332 221
Q ss_pred eecCCCCCCchhHHHHHHHHh
Q 029255 163 TPFNRPHDHLPARKGYVQNFL 183 (196)
Q Consensus 163 ~~~~r~~d~~~~r~~yl~~~~ 183 (196)
..-.| ......+.++++.+.
T Consensus 115 ~~se~-t~~~~~~i~~i~~~~ 134 (140)
T 3d0j_A 115 DNSDF-CDLSKEEIEYIQTNA 134 (140)
T ss_dssp GGEEE-EECCHHHHHHHHHHH
T ss_pred CCCcc-ccCCHHHHHHHHHHH
Confidence 11111 134567888888754
No 29
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.72 E-value=3.1e-08 Score=71.32 Aligned_cols=62 Identities=23% Similarity=0.284 Sum_probs=50.2
Q ss_pred ccccccCc-ceE-EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTD-EEI-RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~-dEi-ryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
..+|.|+. .|+ .||++|++.+.+. +++ .+.+++||++.+|+|+.|++....+ ...+-+|..+
T Consensus 46 ~~~H~H~~~~e~~~~vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~~p~ 109 (110)
T 2q30_A 46 LPVHSHNIEGELNIVVLEGEGEFVGD--GDA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTIAPP 109 (110)
T ss_dssp EEEECCSSSCEEEEEEEESCEEEECG--GGC--EEEECTTEEEEEETTSCEEEEESSS--EEEEEEEESC
T ss_pred CCcccCCCCccEEEEEEeCEEEEEeC--CCE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEECCC
Confidence 67899996 688 8999999999884 123 3689999999999999999988655 5667677654
No 30
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.70 E-value=8.7e-08 Score=76.02 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=60.7
Q ss_pred eeEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC--CeeeeeecCCC
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRFTLDTDN 148 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG--~~H~F~~~~~~ 148 (196)
-++++.|+. .....|.|.. +|++||++|++.+.+. ++ .+.+++||+|.+|+| +.|++....+.
T Consensus 46 ~~~~l~pG~---------~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~ 111 (163)
T 3i7d_A 46 NLVRLEPGA---------KSSLRHYHMEQDEFVMVTEGALVLVDD---QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDA 111 (163)
T ss_dssp EEEEECTTC---------BSSSSEEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCCCBEEECCSSS
T ss_pred EEEEECCCC---------cCCCCccCCCCcEEEEEEECEEEEEEC---CE--EEEeCCCCEEEECCCCCcceEEEECCCC
Confidence 466777664 1236899998 7999999999999995 44 478999999999999 99999876666
Q ss_pred cEEEEEEecCCCc
Q 029255 149 YIKAMRLFVGDPV 161 (196)
Q Consensus 149 ~~~alRlF~~~~g 161 (196)
.++.+-++...+.
T Consensus 112 ~~~~l~v~~p~~~ 124 (163)
T 3i7d_A 112 PATFLVVGTRTPT 124 (163)
T ss_dssp CEEEEEEEECCSC
T ss_pred CEEEEEEECCCCC
Confidence 6788877776653
No 31
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.69 E-value=6.8e-08 Score=77.57 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=53.6
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 91 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 91 f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
....|.|..+|++||++|++.+.+. ++ ...+++||+|.||+|+.|++....+..+..+-++...
T Consensus 65 ~~~~H~H~~~E~~~Vl~G~~~~~v~---g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 65 HSTLERHQHAHGVMILKGRGHAMVG---RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp ECCCBBCSSCEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred ccCceeCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 3578999999999999999999884 55 4789999999999999999987666666766666654
No 32
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.68 E-value=8.3e-08 Score=83.81 Aligned_cols=80 Identities=21% Similarity=0.220 Sum_probs=62.4
Q ss_pred eeeeEEECCCCCCChHHHhhccccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCC
Q 029255 70 YMDFCEVCPEKLPNYEEKIKNFFEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 70 ~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~ 148 (196)
..-.+++.|+. ....|.|. .+|++||++|++.+.+.+.+++.....+++||+|+||+|+.|++....+.
T Consensus 53 ~~~~~~l~pg~----------~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~ 122 (361)
T 2vqa_A 53 AGVYMSLEPGA----------IRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPD 122 (361)
T ss_dssp EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSS
T ss_pred eeEEEEEcCCC----------CCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Confidence 34566777653 35689999 79999999999999997655532347899999999999999999887655
Q ss_pred cEEEEEEecCC
Q 029255 149 YIKAMRLFVGD 159 (196)
Q Consensus 149 ~~~alRlF~~~ 159 (196)
.+..+-+|...
T Consensus 123 ~~~~l~v~~~~ 133 (361)
T 2vqa_A 123 TAKFLLVFNDG 133 (361)
T ss_dssp CEEEEEEESST
T ss_pred CEEEEEEECCC
Confidence 57777666543
No 33
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.67 E-value=5.1e-08 Score=74.16 Aligned_cols=75 Identities=13% Similarity=0.302 Sum_probs=52.5
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcE
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 150 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~ 150 (196)
.-.+++.|+. -+.+|. ..+|+.|||+|++.+.+. ++ .+.+++||.|.||+|+.|++.... ...
T Consensus 42 ~~~~~~~pG~----------~~~~H~-~~~E~~~Vl~G~~~~~~~---g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~ 104 (119)
T 3lwc_A 42 IGYGRYAPGQ----------SLTETM-AVDDVMIVLEGRLSVSTD---GE--TVTAGPGEIVYMPKGETVTIRSHE-EGA 104 (119)
T ss_dssp EEEEEECTTC----------EEEEEC-SSEEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCEEEEEEEE-EEE
T ss_pred EEEEEECCCC----------CcCccC-CCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCEEEEEcCC-CCe
Confidence 3556666653 146675 679999999999999983 55 478999999999999999998753 334
Q ss_pred EEEEEecCCCceee
Q 029255 151 KAMRLFVGDPVWTP 164 (196)
Q Consensus 151 ~alRlF~~~~gW~~ 164 (196)
+.+ |.-.|.|..
T Consensus 105 ~~l--~v~~P~w~~ 116 (119)
T 3lwc_A 105 LTA--YVTYPHWRP 116 (119)
T ss_dssp EEE--EEEECC---
T ss_pred EEE--EEECCCCcc
Confidence 444 333334864
No 34
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.67 E-value=1.4e-07 Score=82.46 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=56.3
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
...|.|.. +|+.||++|++.+.+.+.+++...+.+++||++++|+|+.|++....+..++.+-++..
T Consensus 247 ~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 247 RQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp EEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred cccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 55799998 99999999999999965556644688999999999999999998766656778877765
No 35
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.67 E-value=8.7e-08 Score=78.72 Aligned_cols=57 Identities=25% Similarity=0.299 Sum_probs=48.5
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCC---CeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 90 NFFEEHLHTDEEIRYCVAGSGYFDVRDRN---EKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 90 ~f~~eH~H~~dEiryil~G~g~f~v~~~~---d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
..+.+|.|+.||+||+++|+....+++.+ .+...|.+++||+++||+|++|+....+
T Consensus 45 ~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 45 ERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp CCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred cCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 45899988899999999999999999633 1455799999999999999999986544
No 36
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.66 E-value=1.2e-07 Score=76.36 Aligned_cols=75 Identities=13% Similarity=0.229 Sum_probs=56.9
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCC-
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN- 148 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~- 148 (196)
.-.+++.|.. ....| |.. +|+.||++|++.+.+.+.++.. ...+++||++++|+|+.|++....+.
T Consensus 43 ~~~~~l~pg~----------~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~-~~~l~~GDv~~~P~g~~H~~~N~g~~~ 110 (178)
T 1dgw_A 43 VLEYCSKPNT----------LLLPH-HSDSDLLVLVLEGQAILVLVNPDGRD-TYKLDQGDAIKIQAGTPFYLINPDNNQ 110 (178)
T ss_dssp EEEEEECTTE----------EEEEE-EESSEEEEEEEESEEEEEEEETTEEE-EEEEETTEEEEECTTCCEEEEECCSSS
T ss_pred EEEEEecCCc----------EecCc-CCCCCEEEEEEeEEEEEEEEeCCCcE-EEEECCCCEEEECCCCeEEEEeCCCCC
Confidence 4556677653 35789 654 9999999999999997554333 57899999999999999999875543
Q ss_pred cEEEEEEec
Q 029255 149 YIKAMRLFV 157 (196)
Q Consensus 149 ~~~alRlF~ 157 (196)
.++.+-++.
T Consensus 111 ~l~~l~v~~ 119 (178)
T 1dgw_A 111 NLRILKFAI 119 (178)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEC
Confidence 566665543
No 37
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.65 E-value=6e-08 Score=72.38 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=46.7
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCC-cEEEEEEec
Q 029255 93 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN-YIKAMRLFV 157 (196)
Q Consensus 93 ~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~-~~~alRlF~ 157 (196)
.+|.|..+|+.||++|++.+.++ ++...+.+++||.|.||+|+.|++....+. ....+-+|.
T Consensus 47 ~~~~~~~~E~~~Vl~G~~~l~~~---~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 47 FWYDSPQDEWVMVVSGSAGIECE---GDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp CCBCCSSEEEEEEEESCEEEEET---TCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred ccccCCccEEEEEEeCeEEEEEC---CEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 34778889999999999999996 321016899999999999999999765442 344444443
No 38
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.64 E-value=1.2e-07 Score=70.31 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=42.7
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+.+| |+.+|+.||++|++.+.+. +++ .+.+++||.|++|+|+.|++.....
T Consensus 43 ~~~h-H~~~E~~~Vl~G~~~~~i~--~g~--~~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 43 FDWY-YDTNETCYILEGKVEVTTE--DGK--KYVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp EEEE-CSSCEEEEEEEEEEEEEET--TCC--EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred cccc-CCceEEEEEEeCEEEEEEC--CCC--EEEECCCCEEEECCCCcEEEEeCCC
Confidence 3467 8899999999999999984 244 4789999999999999999976443
No 39
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.61 E-value=8e-08 Score=79.80 Aligned_cols=72 Identities=11% Similarity=0.267 Sum_probs=57.8
Q ss_pred eeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCc
Q 029255 70 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 149 (196)
Q Consensus 70 ~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~ 149 (196)
..-++++.++. ...+|.|+.+|+.||++|++.|.+. |+ ...+++||+|++|+|+.|.+.+.++
T Consensus 38 ~~~~~~~~~G~----------~~~~h~h~~~~~~~Vl~G~~~~~i~---~~--~~~l~~Gd~~~~p~~~~H~~~a~~~-- 100 (227)
T 3rns_A 38 YISLFSLAKDE----------EITAEAMLGNRYYYCFNGNGEIFIE---NN--KKTISNGDFLEITANHNYSIEARDN-- 100 (227)
T ss_dssp EEEEEEECTTC----------EEEECSCSSCEEEEEEESEEEEEES---SC--EEEEETTEEEEECSSCCEEEEESSS--
T ss_pred EEEEEEECCCC----------ccCccccCCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECCC--
Confidence 44566676653 4789999999999999999999995 44 3689999999999999999998765
Q ss_pred EEEEEEecC
Q 029255 150 IKAMRLFVG 158 (196)
Q Consensus 150 ~~alRlF~~ 158 (196)
++.+-++..
T Consensus 101 ~~~l~i~~~ 109 (227)
T 3rns_A 101 LKLIEIGEK 109 (227)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEee
Confidence 566655443
No 40
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.61 E-value=9.5e-08 Score=84.41 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=61.1
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcE
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 150 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~ 150 (196)
.-.+++.|+. ....|.|..+|++||++|++.+.+.+.+++.+...+++||+++||+|+.|++....+ .+
T Consensus 81 ~~~~~l~pg~----------~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~ 149 (385)
T 1j58_A 81 SVNMRLKPGA----------IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GA 149 (385)
T ss_dssp EEEEEECTTC----------EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EE
T ss_pred EEEEEECCCC----------CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CE
Confidence 3456666653 367899999999999999999999866677555689999999999999999987543 35
Q ss_pred EEEEEecCC
Q 029255 151 KAMRLFVGD 159 (196)
Q Consensus 151 ~alRlF~~~ 159 (196)
..+-+|...
T Consensus 150 ~~~~v~~~~ 158 (385)
T 1j58_A 150 EFLLVFDDG 158 (385)
T ss_dssp EEEEEESCT
T ss_pred EEEEEECCC
Confidence 666666543
No 41
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.59 E-value=1.8e-07 Score=74.82 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=48.0
Q ss_pred ccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec-CCCcEEEEEE
Q 029255 94 EHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDNYIKAMRL 155 (196)
Q Consensus 94 eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~-~~~~~~alRl 155 (196)
+|.|+.+|+.||++|++.+.+.+ ++..-.+.+++||.|.+|+|+.|++... .+..++.+-+
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAV 196 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEEE
Confidence 79999999999999999999963 1111147899999999999999999876 5444555544
No 42
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.58 E-value=9.5e-08 Score=77.17 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=49.0
Q ss_pred ccccccCc-ceEEEEEe--ceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTD-EEIRYCVA--GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~--G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
...|.|.. +|++|||+ |+|.|.+. ++ .+.+++||+|+||+|+.|++. + .++.|-++.++
T Consensus 58 ~~~H~H~~~~E~~yVLe~~G~g~v~id---ge--~~~l~~GD~v~IPpg~~H~i~-g---~l~~L~I~~Pp 119 (157)
T 4h7l_A 58 ARTHYHREHQEIYVVLDHAAHATIELN---GQ--SYPLTKLLAISIPPLVRHRIV-G---EATIINIVSPP 119 (157)
T ss_dssp CCCBBCSSCEEEEEEEEECTTCEEEET---TE--EEECCTTEEEEECTTCCEEEE-S---CEEEEEEEESS
T ss_pred ccceECCCCcEEEEEEecCcEEEEEEC---CE--EEEeCCCCEEEECCCCeEeeE-C---CEEEEEEECCC
Confidence 47899975 79999999 99999995 55 478999999999999999996 2 46777666643
No 43
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.58 E-value=2.3e-07 Score=74.11 Aligned_cols=59 Identities=14% Similarity=0.038 Sum_probs=47.5
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEec
Q 029255 93 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 93 ~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~ 157 (196)
.+|.|..+|+.||++|++.+.+. ++ .+.+++||.|.+|+|+.|++....+..+ .+-++.
T Consensus 120 ~~H~h~~~E~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~ 178 (192)
T 1y9q_A 120 SPHALGVIEYIHVLEGIMKVFFD---EQ--WHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVA 178 (192)
T ss_dssp CCCSTTCEEEEEEEESCEEEEET---TE--EEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEE
T ss_pred CCCCCCCEEEEEEEEeEEEEEEC---CE--EEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEe
Confidence 37888889999999999999984 55 3689999999999999999987555444 444443
No 44
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.57 E-value=1.1e-07 Score=68.56 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=46.5
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEE
Q 029255 92 FEEHLHTDE-EIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 153 (196)
Q Consensus 92 ~~eH~H~~d-Eiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~al 153 (196)
..+|.|+.+ |+.||++|++.+.+. ++ + ...+++||.|.+|+|+.|++....+..++.+
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~--~g~~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETP--EGSV--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEET--TEEE--EEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeC--CCCE--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 458999986 699999999999985 22 3 4689999999999999999987555444444
No 45
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.57 E-value=1.7e-07 Score=71.42 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=47.0
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEE
Q 029255 92 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 153 (196)
Q Consensus 92 ~~eH~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~al 153 (196)
..+|.|. .+|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+..+..+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDN---GK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEEC---CE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEE
Confidence 4689998 59999999999999985 54 4689999999999999999987655444444
No 46
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.57 E-value=1.9e-07 Score=69.62 Aligned_cols=60 Identities=18% Similarity=0.324 Sum_probs=47.1
Q ss_pred ccccCcc-eEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 94 EHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 94 eH~H~~d-Eiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
.|.|+.. +++||++|++.+.+. ++ .+.+++||+|+||+|+.|++....+..+..+-++..
T Consensus 42 ~H~H~~~e~~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 42 VHSHKQNEEIYGILSGKGFITID---GE--KIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp EEEESSEEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEE
T ss_pred CccCCCceEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcC
Confidence 7999985 466699999999995 44 478999999999999999998765544555545443
No 47
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.55 E-value=4.9e-07 Score=79.80 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=55.2
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
...|.|.. +|+.||++|++.+.+.+.+++-..+.+++||.+++|+|+.|++....+..+..+-++..
T Consensus 270 ~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 270 RELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred cCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 45799999 99999999999999975554323578999999999999999998766666777777764
No 48
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.55 E-value=3.4e-07 Score=85.36 Aligned_cols=73 Identities=12% Similarity=0.194 Sum_probs=58.5
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC-CCceee
Q 029255 91 FFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG-DPVWTP 164 (196)
Q Consensus 91 f~~eH~H~~-dEiryil~G~g~f~v~~~~-d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~-~~gW~~ 164 (196)
....|+|+. +|+.||++|++.+.+.+.+ .+++...+++||+++||+|+.|+...+. ..+..|-+|+. .++-+.
T Consensus 379 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ts~~p~~~~ 454 (493)
T 2d5f_A 379 IYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFKTHHNAVSSY 454 (493)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSTTCCEEE
T ss_pred eeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEECCCCCccee
Confidence 478999995 8999999999999998664 4555677999999999999999988754 45778878844 355443
No 49
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.55 E-value=3.7e-07 Score=79.13 Aligned_cols=72 Identities=13% Similarity=0.265 Sum_probs=58.0
Q ss_pred eeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEE
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 151 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~ 151 (196)
-++++.|+.. +---|+|..+|..|||+|+|.+.+. ++| +.+++||+|.+|+|..|+|....+..++
T Consensus 189 ~~~t~~PG~~---------~p~~e~H~~eh~~~vL~G~g~y~l~---~~~--~~V~~GD~i~~~~~~~h~~~n~G~e~~~ 254 (266)
T 4e2q_A 189 HTMDFQPGEF---------LNVKEVHYNQHGLLLLEGQGIYRLG---DNW--YPVQAGDVIWMAPFVPQWYAALGKTRSR 254 (266)
T ss_dssp EEEEECTTCB---------CSSCCCCSCCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred EEEEECCCcC---------cCCceEcccceEEEEEeceEEEEEC---CEE--EEecCCCEEEECCCCcEEEEeCCCCCEE
Confidence 4677777641 2235899999999999999999994 777 6899999999999999999987666676
Q ss_pred EEEEecC
Q 029255 152 AMRLFVG 158 (196)
Q Consensus 152 alRlF~~ 158 (196)
-| |+++
T Consensus 255 yl-~ykd 260 (266)
T 4e2q_A 255 YL-LYKD 260 (266)
T ss_dssp EE-EEEE
T ss_pred EE-EEcc
Confidence 66 5554
No 50
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.55 E-value=2.6e-07 Score=85.02 Aligned_cols=78 Identities=9% Similarity=0.131 Sum_probs=61.6
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC-CCc
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNY 149 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~-~~~ 149 (196)
.-.++|.|.. +...|.|..+|+.||++|+|.+.+.+.++. ....+++||++++|+|+.||+.... +..
T Consensus 88 ~~~~~l~Pgg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~ 156 (445)
T 2cav_A 88 VLEYCSKPNT----------LLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQN 156 (445)
T ss_dssp EEEEEECSSE----------EEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSCC
T ss_pred EEEEEECCCc----------CccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCCC
Confidence 3556777664 467895667999999999999999755444 4678999999999999999998765 566
Q ss_pred EEEEEEecCC
Q 029255 150 IKAMRLFVGD 159 (196)
Q Consensus 150 ~~alRlF~~~ 159 (196)
++++-+|...
T Consensus 157 l~~l~v~~~~ 166 (445)
T 2cav_A 157 LRILKFAITF 166 (445)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEeccC
Confidence 8888777643
No 51
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.54 E-value=1.7e-07 Score=78.47 Aligned_cols=63 Identities=19% Similarity=0.215 Sum_probs=55.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
...|.|..+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+..+..+-+|..+
T Consensus 159 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~--~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 159 MPFHKHRNEQIGICIGGGYDMTVE---GCT--VEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp EEEECCSSEEEEEECSSCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred CCCEeCCCcEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 568999999999999999999985 453 679999999999999999998777778888888854
No 52
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.54 E-value=5.5e-07 Score=83.56 Aligned_cols=66 Identities=15% Similarity=0.287 Sum_probs=55.3
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEe
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~~-d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF 156 (196)
.....|+|+. +|+.||++|++.+.+.+.+ .+++...+++||+++||+|+.|++..+ +..+..+-|+
T Consensus 349 a~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng-~~~l~~l~f~ 416 (476)
T 1fxz_A 349 AMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ-SDNFEYVSFK 416 (476)
T ss_dssp CEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-STTEEEEEEE
T ss_pred ceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC-CCCEEEEEEE
Confidence 3478999995 8999999999999998654 356666799999999999999999885 5557777777
No 53
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.52 E-value=5.5e-07 Score=84.38 Aligned_cols=72 Identities=18% Similarity=0.267 Sum_probs=57.8
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC-CCce
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG-DPVW 162 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~-~~gW 162 (196)
.....|+|+. +|+.||++|++.+.+.+.++ +.+...+++||+++||+|+.|++..+ +..+..+-|++. .++-
T Consensus 383 ~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng-~e~l~~l~f~~s~~p~~ 457 (510)
T 3c3v_A 383 ALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQ-SDNFEYVAFKTDSRPSI 457 (510)
T ss_dssp CEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSSSCCE
T ss_pred ceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeC-CCCEEEEEEECCCCcce
Confidence 3478999995 89999999999999986543 56566799999999999999999885 556777777743 3443
No 54
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.49 E-value=2.5e-07 Score=76.85 Aligned_cols=56 Identities=27% Similarity=0.391 Sum_probs=47.4
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeee-cCCCcEEEEE
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL-DTDNYIKAMR 154 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~-~~~~~~~alR 154 (196)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++.. .++ ++++-
T Consensus 166 ~~~H~H~~~e~~~Vl~G~~~~~i~---g~--~~~l~~Gd~i~ip~~~~H~~~~~~~~--~~~ll 222 (227)
T 3rns_A 166 LDPHKAPGDALVTVLDGEGKYYVD---GK--PFIVKKGESAVLPANIPHAVEAETEN--FKMLL 222 (227)
T ss_dssp EEEECCSSEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTSCEEEECCSSC--EEEEE
T ss_pred cCCEECCCcEEEEEEeEEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCC--EEEEE
Confidence 579999999999999999999985 55 3789999999999999999988 443 55543
No 55
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.48 E-value=4.4e-07 Score=82.71 Aligned_cols=77 Identities=12% Similarity=0.178 Sum_probs=61.1
Q ss_pred eeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec-CCC
Q 029255 70 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDN 148 (196)
Q Consensus 70 ~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~-~~~ 148 (196)
..-.++|.|.. +...|.|..+|++||++|+|.+.+-+. +......+++||+++||+|+.||+... .+.
T Consensus 50 s~~~~~l~PGg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPNT----------ILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccCc----------CcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 45677888764 468895556999999999999998644 333467899999999999999999876 466
Q ss_pred cEEEEEEec
Q 029255 149 YIKAMRLFV 157 (196)
Q Consensus 149 ~~~alRlF~ 157 (196)
.+++|-++.
T Consensus 119 ~l~~l~~~~ 127 (416)
T 1uij_A 119 NLKMIWLAI 127 (416)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEec
Confidence 688887774
No 56
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.48 E-value=6e-07 Score=76.46 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=48.9
Q ss_pred ccc-cccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC-CcEEEEEE
Q 029255 92 FEE-HLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKAMRL 155 (196)
Q Consensus 92 ~~e-H~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~-~~~~alRl 155 (196)
... |.|..+|+.||++|++.+.+. +++ +.+++||+|.+|+|+.|++....+ ..++.+-+
T Consensus 195 ~~~~H~H~~~E~~yVl~G~~~~~i~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~ 255 (274)
T 1sef_A 195 HAYIETHVQEHGAYLISGQGMYNLD---NEW--YPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYS 255 (274)
T ss_dssp CSSCBCCSCCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred cCcceeccCeEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCCEEEEEE
Confidence 355 999999999999999999995 564 689999999999999999987655 55555533
No 57
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.46 E-value=5.2e-07 Score=79.85 Aligned_cols=64 Identities=22% Similarity=0.281 Sum_probs=50.6
Q ss_pred ccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 94 EHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 94 eH~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
.|.|. .+|++||++|++.+.+.+.++..-.+.+++||.|.+|+|+.|+|....+.. +.+-++..
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p 129 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVP 129 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEES
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcC
Confidence 79998 699999999999999986333222578999999999999999998755443 55555543
No 58
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.46 E-value=6.2e-07 Score=82.22 Aligned_cols=77 Identities=10% Similarity=0.176 Sum_probs=59.7
Q ss_pred eeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC-CC
Q 029255 70 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DN 148 (196)
Q Consensus 70 ~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~-~~ 148 (196)
..-.++|.|.. +...|.|..+|++||++|+|.+.+.+.+ ......+++||+++||+|+.||+.... +.
T Consensus 62 s~~~~~l~PGg----------~~~pHh~~a~Ei~yVl~G~g~v~~v~~~-~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 62 RVVEFKSKPNT----------LLLPHHADADFLLVVLNGTAVLTLVNPD-SRDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESEEEEEEECSS-CEEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEecCCc----------CccCccCCCceEEEEEecEEEEEEEeCC-CCEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 34667778764 4788944569999999999999997543 334678999999999999999998764 55
Q ss_pred cEEEEEEec
Q 029255 149 YIKAMRLFV 157 (196)
Q Consensus 149 ~~~alRlF~ 157 (196)
.+.++-+|.
T Consensus 131 ~l~~l~~~~ 139 (434)
T 2ea7_A 131 NLRIIKLAI 139 (434)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEec
Confidence 677776663
No 59
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.44 E-value=5.2e-07 Score=83.70 Aligned_cols=82 Identities=18% Similarity=0.210 Sum_probs=65.0
Q ss_pred CCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC-CeEE-----------------------
Q 029255 67 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EKWI----------------------- 122 (196)
Q Consensus 67 Gy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~-d~~~----------------------- 122 (196)
|+.. =.++|.|.. +...|+|...|+.||++|+|++.+-..+ .+.+
T Consensus 49 gvs~-~R~~i~P~g----------l~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~ 117 (465)
T 3qac_A 49 GVSV-IRRTIEPHG----------LLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKF 117 (465)
T ss_dssp TCEE-EEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----------------------
T ss_pred ceEE-EEEEEcCCc----------CcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccc
Confidence 7644 456777764 5889999889999999999999987442 1211
Q ss_pred -------------EEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 123 -------------RIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 123 -------------~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
...+++||+|+||+|+.||+..+.+..+++|-+|...
T Consensus 118 ~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~ 167 (465)
T 3qac_A 118 GMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTA 167 (465)
T ss_dssp -------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTT
T ss_pred ccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCC
Confidence 2479999999999999999988777779999888653
No 60
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.44 E-value=1.9e-07 Score=79.46 Aligned_cols=65 Identities=17% Similarity=0.114 Sum_probs=50.2
Q ss_pred ccccccC-cceEEEEEeceEEEEE--------EeC-------CCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEE-EE
Q 029255 92 FEEHLHT-DEEIRYCVAGSGYFDV--------RDR-------NEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKA-MR 154 (196)
Q Consensus 92 ~~eH~H~-~dEiryil~G~g~f~v--------~~~-------~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~a-lR 154 (196)
...|.|. .+|++||++|++.+.+ .+. +++...+.+++||+|.||+|+.|.|....+...++ +-
T Consensus 56 ~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~ 135 (239)
T 2xlg_A 56 PMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFV 135 (239)
T ss_dssp CCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEE
T ss_pred CCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 4789999 5999999999999999 422 11233578999999999999999998755544565 44
Q ss_pred Ee
Q 029255 155 LF 156 (196)
Q Consensus 155 lF 156 (196)
++
T Consensus 136 ~~ 137 (239)
T 2xlg_A 136 WM 137 (239)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 61
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.43 E-value=4.7e-07 Score=84.05 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=64.7
Q ss_pred CCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe----------------------EEEE
Q 029255 67 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK----------------------WIRI 124 (196)
Q Consensus 67 Gy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~----------------------~~~i 124 (196)
|+. .=.++|.|.. +...|.|+.+|+.||++|+|++.+-..+.. ....
T Consensus 47 gvs-~~r~~l~Pgg----------l~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~ 115 (476)
T 1fxz_A 47 GVA-LSRCTLNRNA----------LRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIY 115 (476)
T ss_dssp TCE-EEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEE
T ss_pred ceE-EEEEEEcCCC----------EecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEE
Confidence 764 4456777764 578999999999999999999999864321 0135
Q ss_pred EEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 125 WVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 125 ~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
.+++||+|.||+|+.||+....+..+++|-+|..
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~ 149 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDT 149 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 7999999999999999998877777888888863
No 62
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.42 E-value=6.2e-07 Score=76.83 Aligned_cols=62 Identities=26% Similarity=0.505 Sum_probs=52.1
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 92 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 92 ~~eH~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
...|.|. .+|+.||++|++.+.+. ++ .+.+++||.+.+|+|+.|++....+ ..+.+-+|...
T Consensus 231 ~~~h~H~~~~e~~~vl~G~~~~~i~---~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~ 293 (337)
T 1y3t_A 231 IVDHYHEYHTETFYCLEGQMTMWTD---GQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPG 293 (337)
T ss_dssp CCCEECSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESS
T ss_pred CCCcCCCCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCc
Confidence 4679999 59999999999999994 55 3789999999999999999988666 57777776543
No 63
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.42 E-value=7e-07 Score=78.17 Aligned_cols=54 Identities=22% Similarity=0.327 Sum_probs=47.1
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+.+| |++ ||+||+++|.....+++. ++.-.|.+++||+++||+|++|+....++
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 7899 775 999999999999999953 54557999999999999999999987555
No 64
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.40 E-value=8.1e-07 Score=76.12 Aligned_cols=61 Identities=18% Similarity=0.325 Sum_probs=50.7
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 92 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 92 ~~eH~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
...|.|. .+|++||++|++.+.+. ++ .+.+++||+|.+|+|+.|.+....+. .+.+-+|..
T Consensus 59 ~~~h~H~~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p 120 (337)
T 1y3t_A 59 FPLHVHKDTHEGILVLDGKLELTLD---GE--RYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMK 120 (337)
T ss_dssp EEEEECTTCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEET
T ss_pred CCceeCCCceEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECC
Confidence 5679999 79999999999999984 55 37899999999999999999876553 666666544
No 65
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.40 E-value=6.1e-07 Score=81.03 Aligned_cols=58 Identities=28% Similarity=0.531 Sum_probs=48.5
Q ss_pred ccccccCcceEEEEEeceEE-EEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEE
Q 029255 92 FEEHLHTDEEIRYCVAGSGY-FDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMR 154 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~-f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alR 154 (196)
...|.|..+|++||++|+|. +.+ +++ ++.+++||+|+||+|..|.+..+.+..+..+-
T Consensus 116 ~~~HrH~~~ev~~VleG~G~~~~v---dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 116 APEHRHSQNAFRFVVEGEGVWTVV---NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp EEEEEESSCEEEECSSCEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred cCceecccceEEEEEecceEEEEE---CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 67899999999999999995 555 355 68999999999999999999887665566543
No 66
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.39 E-value=1.6e-06 Score=81.54 Aligned_cols=73 Identities=11% Similarity=0.227 Sum_probs=56.8
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEec-CCCcee
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV-GDPVWT 163 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~-~~~gW~ 163 (196)
.....|+|+. .|+.||++|++.+.+.+.++ +++...+++||+++||+|+.|...++ ++.+..+-|.+ ..++-.
T Consensus 405 gm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~ss~np~~~ 480 (531)
T 3fz3_A 405 GIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFKTEENAFIN 480 (531)
T ss_dssp CEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSTTCCEE
T ss_pred ccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEecCCCCcce
Confidence 3478999997 89999999999999987653 56788999999999999999987665 44455564444 345543
No 67
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.39 E-value=3.3e-07 Score=70.43 Aligned_cols=66 Identities=18% Similarity=0.212 Sum_probs=50.7
Q ss_pred CCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 67 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 67 Gy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
|-...-+..+.|.. +.+|.|..+|+.|||+|++.+.+. +++ .+.+++||.+++|+|+.|++...+
T Consensus 47 g~~~~g~w~~~pG~-----------~~~~~~~~~E~~~Vl~G~~~l~~~--~g~--~~~l~~GD~~~ip~g~~h~~~~~~ 111 (123)
T 3bcw_A 47 GKVESGVWESTSGS-----------FQSNTTGYIEYCHIIEGEARLVDP--DGT--VHAVKAGDAFIMPEGYTGRWEVDR 111 (123)
T ss_dssp TTEEEEEEEEEEEE-----------EECCCTTEEEEEEEEEEEEEEECT--TCC--EEEEETTCEEEECTTCCCEEEEEE
T ss_pred CCEEEEEEEECCCc-----------eeeEcCCCcEEEEEEEEEEEEEEC--CCe--EEEECCCCEEEECCCCeEEEEECC
Confidence 33455566666543 456877669999999999999984 344 378999999999999999998754
Q ss_pred C
Q 029255 147 D 147 (196)
Q Consensus 147 ~ 147 (196)
.
T Consensus 112 ~ 112 (123)
T 3bcw_A 112 H 112 (123)
T ss_dssp E
T ss_pred c
Confidence 3
No 68
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.39 E-value=2e-06 Score=72.38 Aligned_cols=73 Identities=19% Similarity=0.306 Sum_probs=55.9
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcE
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 150 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~ 150 (196)
.-++++.|+. ..-..|+|..+|..|||+|++.|.+. ++| +.+++||.|.+++|..|+|....+..+
T Consensus 167 ~~~~tl~PG~---------~~~~~~~h~~ee~~~vLeG~~~~~~~---~~~--~~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 167 VSTMSFAPGA---------SLPYAEVHYMEHGLLMLEGEGLYKLE---ENY--YPVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp EEEEEECTTC---------BCSSCBCCSSCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred EEEEEECCCC---------ccCcccCCCceEEEEEEECEEEEEEC---CEE--EEcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 4567777764 12224778899999999999999994 776 589999999999999999988666555
Q ss_pred EEEEEecC
Q 029255 151 KAMRLFVG 158 (196)
Q Consensus 151 ~alRlF~~ 158 (196)
+.+ ++++
T Consensus 233 ~yl-~~kd 239 (246)
T 1sfn_A 233 KYL-LYKD 239 (246)
T ss_dssp EEE-EEEE
T ss_pred EEE-EEEe
Confidence 444 4443
No 69
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.37 E-value=6.4e-07 Score=82.82 Aligned_cols=81 Identities=14% Similarity=0.138 Sum_probs=63.4
Q ss_pred CCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe-E--------------------EEEE
Q 029255 67 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-W--------------------IRIW 125 (196)
Q Consensus 67 Gy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~-~--------------------~~i~ 125 (196)
|. ..-.++|.|.. +...|+|...|+.||++|+|++.+-..+.. . ....
T Consensus 62 gv-s~~r~~i~pgg----------l~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~ 130 (459)
T 2e9q_A 62 GV-NMIRHTIRPKG----------LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRP 130 (459)
T ss_dssp TE-EEEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEE
T ss_pred ce-EEEEEEEcCCC----------EecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEE
Confidence 55 34457787764 578999999999999999999999644321 1 1247
Q ss_pred EecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 126 VKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 126 ~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
+++||+|+||+|+.||+..+.+..+.++-+|..
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~ 163 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFADT 163 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEecC
Confidence 999999999999999998777777888888764
No 70
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.37 E-value=1.4e-06 Score=69.60 Aligned_cols=61 Identities=18% Similarity=0.425 Sum_probs=44.8
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceee
Q 029255 96 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 164 (196)
Q Consensus 96 ~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~ 164 (196)
.|..+|+.|||+|++.+.+. ++ .+.+++||.|.||+|+.|+|... ...+.+-+.. +++|..
T Consensus 81 ~~~~eE~~yVLeG~~~l~i~---g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~~-P~~~~~ 141 (151)
T 4axo_A 81 TLNYDEIDYVIDGTLDIIID---GR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVTY-PADWAS 141 (151)
T ss_dssp ECSSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEEE-CSCC--
T ss_pred eCCCcEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEEC-CCCccc
Confidence 35679999999999999883 55 47899999999999999999875 2344443332 344544
No 71
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.36 E-value=1.5e-06 Score=73.23 Aligned_cols=57 Identities=21% Similarity=0.243 Sum_probs=45.5
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC-CcEEEE
Q 029255 92 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKAM 153 (196)
Q Consensus 92 ~~eH~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~-~~~~al 153 (196)
...|.|. .+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+ ..++.+
T Consensus 192 ~~~h~H~~~~E~~~Vl~G~~~~~i~---~~~--~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 192 HGYIETHVQEHGAYILSGQGVYNLD---NNW--IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp BEEEEEESSCEEEEEEESEEEEESS---SCE--EEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred cCcccCCCceEEEEEEEeEEEEEEC---CEE--EEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4578885 58999999999999985 554 689999999999999999987655 555555
No 72
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.36 E-value=1e-06 Score=82.11 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=64.6
Q ss_pred cCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCC--------------------------
Q 029255 66 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-------------------------- 119 (196)
Q Consensus 66 rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d-------------------------- 119 (196)
.|+ ..-.++|.|.. +...|.|+..|+.||++|+|++.+-..+.
T Consensus 43 ~gv-~~~r~~i~pgg----------l~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~ 111 (493)
T 2d5f_A 43 AGV-TVSKRTLNRNG----------LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSH 111 (493)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEE
T ss_pred CCE-EEEEEEeCCCc----------EeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 465 45668888775 47899999999999999999999974321
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
+.+ ..+++||+|+||+|+.||+..+.+..+++|-+|..
T Consensus 112 qkv-~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~ 149 (493)
T 2d5f_A 112 QKI-RHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDT 149 (493)
T ss_dssp SCE-EEEETTEEEEECTTCCEEEEECSSSCEEEEEEECT
T ss_pred ceE-EEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 112 37999999999999999999877777888888763
No 73
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.35 E-value=6.7e-07 Score=79.54 Aligned_cols=60 Identities=23% Similarity=0.379 Sum_probs=49.5
Q ss_pred ccccccCcceEEEEEeceEEE-EEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEe
Q 029255 92 FEEHLHTDEEIRYCVAGSGYF-DVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f-~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF 156 (196)
...|.|..+|++||++|+|.| .| +++ ++.+++||+|+||+|+.|++....+..+..+-+.
T Consensus 113 ~~~H~H~~~e~~yVl~G~g~~t~v---~g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 113 APSHRHNQSALRFIVEGKGAFTAV---DGE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp EEEEEESSCEEEEEEECSSCEEEE---TTE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred cCCeecCcceEEEEEEEEEEEEEE---CCE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 568999999999999999998 66 355 4789999999999999999987655556666553
No 74
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.33 E-value=1.3e-06 Score=81.91 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=65.5
Q ss_pred cCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe-------------------------
Q 029255 66 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK------------------------- 120 (196)
Q Consensus 66 rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~------------------------- 120 (196)
.|+. .=.++|.|.. +...|+|...|+.||++|+|++.+-..+..
T Consensus 46 ~gvs-~~r~~i~p~g----------l~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 46 AGVA-LSRLVLRRNA----------LRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp HTCE-EEEEEECTTE----------EEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred CcEE-EEEEEECCCC----------CccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 3764 4567777764 578999999999999999999999864320
Q ss_pred --E--------EEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 121 --W--------IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 121 --~--------~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
. ....+++||+|.||+|+.||+..+.+..+++|-+|...
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~ 163 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTN 163 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTT
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCC
Confidence 0 01579999999999999999988777778888888553
No 75
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.31 E-value=1.8e-06 Score=78.42 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=63.8
Q ss_pred eeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCE------EEeCCCCeeeee
Q 029255 70 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM------IVLPAGCYHRFT 143 (196)
Q Consensus 70 ~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDl------I~VPaG~~H~F~ 143 (196)
..-.+++.|.. +...|.|..+|+.||++|+|...+-+.++.. ...+++||+ ++||+|+.||+.
T Consensus 53 s~~~~~l~pgg----------~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~-~~~l~~GDv~~~~~~~~iP~G~~h~~~ 121 (397)
T 2phl_A 53 RLVEFRSKPET----------LLLPQQADAELLLVVRSGSAILVLVKPDDRR-EYFFLTSDNPIFSDHQKIPAGTIFYLV 121 (397)
T ss_dssp EEEEEEECSSE----------EEEEEEESEEEEEEEEESEEEEEEEETTTEE-EEEEEESSCTTSCSEEEECTTCEEEEE
T ss_pred EEEEEEECCCc----------CccCEecCCCeEEEEEeeeEEEEEEeCCCcE-EEEECCCCcccccceEEECCCCcEEEE
Confidence 34677788764 4678889889999999999999998776664 578999999 999999999997
Q ss_pred ecC-CCcEEEEEEecC
Q 029255 144 LDT-DNYIKAMRLFVG 158 (196)
Q Consensus 144 ~~~-~~~~~alRlF~~ 158 (196)
... +..+.++-+|..
T Consensus 122 N~g~~~~l~~i~~~~~ 137 (397)
T 2phl_A 122 NPDPKEDLRIIQLAMP 137 (397)
T ss_dssp ECCSSCCEEEEEEEEE
T ss_pred eCCCCCCeEEEEeecC
Confidence 544 566888888753
No 76
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.31 E-value=1.8e-06 Score=78.51 Aligned_cols=59 Identities=22% Similarity=0.248 Sum_probs=48.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC-CCcEEEEEE
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRL 155 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~-~~~~~alRl 155 (196)
...|.|..+|++|||+|+|++.|. ++ ++.+++||+|+||+|..|.+.... +..+..+.+
T Consensus 307 ~~~HrH~~~~v~~VleG~G~~~V~---ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 307 TKAHRHTGNVIYNVAKGQGYSIVG---GK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp CCCEEESSCEEEEEEECCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CCCcccCCcEEEEEEeCeEEEEEC---CE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 567999999999999999988884 54 589999999999999999998654 334444433
No 77
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.30 E-value=1.6e-06 Score=72.50 Aligned_cols=59 Identities=22% Similarity=0.237 Sum_probs=48.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE-EeCCCCeeeeeecCCCcEEEEEE
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI-VLPAGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI-~VPaG~~H~F~~~~~~~~~alRl 155 (196)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.| +||+|+.|++....+..+..+.+
T Consensus 47 ~~~H~H~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 47 VEPHQHKEVQIGMVVSGELMMTVG---DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEECCSSEEEEEEEESEEEEEET---TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred cCCEECCCcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 579999999999999999999984 44 3689999999 59999999998766554555544
No 78
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.30 E-value=1.9e-06 Score=66.73 Aligned_cols=56 Identities=18% Similarity=0.256 Sum_probs=43.0
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEe
Q 029255 93 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 93 ~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF 156 (196)
.+|. ..+|+.|||+|++.+.+. ++ .+.+++||.|.+|+|+.|++...+ .++.+-++
T Consensus 70 ~~h~-~~~E~~~VLeG~~~l~~~---g~--~~~l~~GD~i~~p~g~~h~~~~~~--~~~~l~v~ 125 (133)
T 2pyt_A 70 PWTL-NYDEIDMVLEGELHVRHE---GE--TMIAKAGDVMFIPKGSSIEFGTPT--SVRFLYVA 125 (133)
T ss_dssp EEEC-SSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEEE--EEEEEEEE
T ss_pred cccC-CCCEEEEEEECEEEEEEC---CE--EEEECCCcEEEECCCCEEEEEeCC--CEEEEEEE
Confidence 3443 479999999999999984 55 468999999999999999998543 24444443
No 79
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.30 E-value=3e-06 Score=77.06 Aligned_cols=59 Identities=15% Similarity=0.389 Sum_probs=48.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeee-cCCCcEEEEE
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL-DTDNYIKAMR 154 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~-~~~~~~~alR 154 (196)
...|.|..+|++|||+|+|.|..- +++ ++.+++||+|++|+|..|.... ..+..+..|-
T Consensus 136 ~~~HrH~~~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~ 195 (394)
T 3bu7_A 136 AGAHRHAASALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQD 195 (394)
T ss_dssp CCCEEESSCEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEEE
T ss_pred cCCccCCcceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEE
Confidence 678999999999999999977332 455 5899999999999999999988 6555555553
No 80
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.30 E-value=3.6e-06 Score=76.64 Aligned_cols=68 Identities=12% Similarity=0.168 Sum_probs=55.8
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC--------------eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEE
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE--------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMR 154 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~~d--------------~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alR 154 (196)
.....|+|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..|+...+ + .+..+-
T Consensus 260 ~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~-~-~~~~l~ 337 (416)
T 1uij_A 260 ALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT-S-NLNFLA 337 (416)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES-S-SEEEEE
T ss_pred cEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC-C-CeEEEE
Confidence 4478999996 79999999999999987654 35555899999999999999999877 3 477887
Q ss_pred EecCC
Q 029255 155 LFVGD 159 (196)
Q Consensus 155 lF~~~ 159 (196)
||+..
T Consensus 338 f~~~~ 342 (416)
T 1uij_A 338 FGINA 342 (416)
T ss_dssp EEETC
T ss_pred EEcCC
Confidence 87654
No 81
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.28 E-value=2.6e-06 Score=64.74 Aligned_cols=49 Identities=12% Similarity=0.292 Sum_probs=43.5
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 93 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 93 ~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
..|.|+.-|+.||++|+|.+.+. ++ ...+++||+++||+|+.|.+....
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQ---GR--EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEEC---CE--EEEecCCeEEEEcCCCCEEEEeCC
Confidence 47899999999999999999995 44 478999999999999999988754
No 82
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.27 E-value=4.6e-06 Score=75.80 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=57.5
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeC------CC-eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDR------NE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~------~d-~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
.....|+|+. .|+.||++|+|++.+-+. ++ +.+...+++||+++||+|..|+-.... .+..+-|++..
T Consensus 250 ~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s 325 (397)
T 2phl_A 250 ALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINA 325 (397)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred cEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCC
Confidence 4578999996 799999999999999876 33 677889999999999999999988775 47777776654
No 83
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.27 E-value=3.9e-06 Score=77.59 Aligned_cols=86 Identities=13% Similarity=0.163 Sum_probs=65.0
Q ss_pred eEEECCCCCCChHHH----------hhccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCee
Q 029255 73 FCEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 140 (196)
Q Consensus 73 vv~l~p~~~p~~e~~----------~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H 140 (196)
+..++...+|.+..+ .......|+|+. .|+.||++|+|.+.+.+.++ +.+.-.+++||+++||+|..|
T Consensus 306 v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 306 ISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 455666666665522 124578999997 79999999999999986554 454556999999999999999
Q ss_pred eeeecCCCcEEEEEEecCC
Q 029255 141 RFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 141 ~F~~~~~~~~~alRlF~~~ 159 (196)
+...+.+ .+..+-+|+..
T Consensus 386 ~~~ng~~-~~~~l~~~~s~ 403 (459)
T 2e9q_A 386 IKRASDR-GFEWIAFKTND 403 (459)
T ss_dssp EEEEEEE-EEEEEEEESSS
T ss_pred EEEeCCC-CeEEEEEecCC
Confidence 9877643 47888888654
No 84
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.26 E-value=2.2e-06 Score=80.07 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=63.2
Q ss_pred cCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC-CeEE--------------------EE
Q 029255 66 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EKWI--------------------RI 124 (196)
Q Consensus 66 rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~-d~~~--------------------~i 124 (196)
.|. ..=.++|.|.. +...|+|...|+.||++|+|++.+-..+ .+.+ ..
T Consensus 44 ~gv-s~~R~~i~pgg----------l~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~ 112 (496)
T 3ksc_A 44 AGV-ALSRATLQRNA----------LRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVN 112 (496)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEE
T ss_pred CCc-eEEEEEecCCC----------EeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheee
Confidence 465 34566677654 5789999889999999999999996543 2211 13
Q ss_pred EEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 125 WVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 125 ~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
.+++||+|+||+|+.||...+.+..+.++-+|..
T Consensus 113 ~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~ 146 (496)
T 3ksc_A 113 RFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDI 146 (496)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccCCCCEEEECCCCcEEEEcCCCCCEEEEEEecc
Confidence 8999999999999999998877777888887754
No 85
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.25 E-value=9.9e-06 Score=75.68 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=65.1
Q ss_pred EECCCCCCChHHH----------hhccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCeeee
Q 029255 75 EVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRF 142 (196)
Q Consensus 75 ~l~p~~~p~~e~~----------~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H~F 142 (196)
.++...+|.+..+ .......|+|+. .|+.||++|+++..|-+.++ +++.-.+++||+++||+|..|.-
T Consensus 344 ~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~ 423 (496)
T 3ksc_A 344 TVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAA 423 (496)
T ss_dssp EECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred EeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEE
Confidence 3555566766653 235688999987 79999999999999987653 46666799999999999999976
Q ss_pred eecCCCcEEEEEEecCC
Q 029255 143 TLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 143 ~~~~~~~~~alRlF~~~ 159 (196)
..+ +..+..+-+|+..
T Consensus 424 ~a~-~e~~~~l~f~~s~ 439 (496)
T 3ksc_A 424 KSL-SDRFSYVAFKTND 439 (496)
T ss_dssp EEC-SSEEEEEEEESST
T ss_pred EeC-CCCEEEEEEECCC
Confidence 655 4557888888553
No 86
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.25 E-value=1.5e-06 Score=77.00 Aligned_cols=62 Identities=8% Similarity=0.107 Sum_probs=49.6
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 91 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 91 f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
....|+|+.++++||++|++.+.+.+. + .+.+++||.|+||+|+.|.|...+. + +.+-.++.
T Consensus 264 ~~~~h~~~~~~~~~vleG~~~i~i~g~--~--~~~l~~Gd~~~iPag~~h~~~~~~~-~-~~~l~~~~ 325 (350)
T 1juh_A 264 TVPTWSFPGACAFQVQEGRVVVQIGDY--A--ATELGSGDVAFIPGGVEFKYYSEAY-F-SKVLFVSS 325 (350)
T ss_dssp CCCCBCCSSCEEEEEEESCEEEEETTS--C--CEEECTTCEEEECTTCCEEEEESSS-S-EEEEEEEE
T ss_pred CCCcccCCCcEEEEEEeeEEEEEECCe--E--EEEeCCCCEEEECCCCCEEEEecCC-e-EEEEEEec
Confidence 467899999999999999999999621 3 3789999999999999999998644 3 44434443
No 87
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.24 E-value=6.5e-06 Score=66.75 Aligned_cols=52 Identities=12% Similarity=-0.008 Sum_probs=44.5
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCc
Q 029255 93 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 149 (196)
Q Consensus 93 ~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~ 149 (196)
..|.|..+|++|||+|++.+.++ ++ .+.+.+||.+.+|+|+.|+|....+..
T Consensus 104 ~~~~h~gEE~~yVLeG~v~vtl~---g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~ 155 (166)
T 2vpv_A 104 LSNSFRTYITFHVIQGIVEVTVC---KN--KFLSVKGSTFQIPAFNEYAIANRGNDE 155 (166)
T ss_dssp EEECCSEEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCEEEEEECSSSC
T ss_pred CccCCCceEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCCEEEEECCCCC
Confidence 34778889999999999999995 44 468999999999999999998766543
No 88
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.24 E-value=5.2e-06 Score=77.01 Aligned_cols=86 Identities=12% Similarity=0.164 Sum_probs=66.6
Q ss_pred eEEECCCCCCChHHHh----------hccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCee
Q 029255 73 FCEVCPEKLPNYEEKI----------KNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 140 (196)
Q Consensus 73 vv~l~p~~~p~~e~~~----------~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H 140 (196)
+..++...+|.+..+- ......|+|+. .|+.||++|+++..|-+.++ +++.-.+++||+++||+|..|
T Consensus 307 v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 386 (466)
T 3kgl_A 307 ISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSV 386 (466)
T ss_dssp EEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeE
Confidence 4456666667655221 25578999987 79999999999999987654 467778999999999999999
Q ss_pred eeeecCCCcEEEEEEecCC
Q 029255 141 RFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 141 ~F~~~~~~~~~alRlF~~~ 159 (196)
.-.++. ..+..+-+|+..
T Consensus 387 ~~~ag~-e~~~~l~~f~s~ 404 (466)
T 3kgl_A 387 VKRATS-EQFRWIEFKTNA 404 (466)
T ss_dssp EEEECS-SEEEEEEEESSS
T ss_pred EEEcCC-CCEEEEEEECCC
Confidence 876654 448888888764
No 89
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.21 E-value=2.8e-06 Score=73.03 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=46.0
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEE
Q 029255 93 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 153 (196)
Q Consensus 93 ~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~al 153 (196)
..|.|..+|+.||++|++.+.+. ++ .+.+++||.|.+|+|+.|++....+..++.+
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~---g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQ---GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEES---SC--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CCcCCCceEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 46889899999999999999995 44 4789999999999999999987544434433
No 90
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.20 E-value=2.4e-06 Score=69.53 Aligned_cols=75 Identities=17% Similarity=0.298 Sum_probs=58.2
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcE
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 150 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~ 150 (196)
.=++++.|+. ....|.|..+|..|||+|++.+.+. +++ ...+++||.| +|+|+.|++....+..+
T Consensus 81 ~~~v~l~PG~----------~~~~H~H~~eE~~~VLeGel~l~ld--~ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~a 145 (172)
T 3es1_A 81 IRVVDMLPGK----------ESPMHRTNSIDYGIVLEGEIELELD--DGA--KRTVRQGGII-VQRGTNHLWRNTTDKPC 145 (172)
T ss_dssp EEEEEECTTC----------BCCCBCCSEEEEEEEEESCEEEECG--GGC--EEEECTTCEE-EECSCCBEEECCSSSCE
T ss_pred EEEEEECCCC----------CCCCeecCceEEEEEEeCEEEEEEC--CCe--EEEECCCCEE-EeCCCcEEEEeCCCCCE
Confidence 3456677664 2468999999999999999999885 234 3689999999 99999999987666567
Q ss_pred EEEEEecCCC
Q 029255 151 KAMRLFVGDP 160 (196)
Q Consensus 151 ~alRlF~~~~ 160 (196)
+++-++....
T Consensus 146 r~l~V~~P~~ 155 (172)
T 3es1_A 146 RIAFILIEAP 155 (172)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEcCCC
Confidence 7777766543
No 91
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.19 E-value=5.8e-06 Score=75.60 Aligned_cols=67 Identities=12% Similarity=0.264 Sum_probs=53.6
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC-------------------------eEEEEEEecCCEEEeCCCCeeeeee
Q 029255 91 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-------------------------KWIRIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 91 f~~eH~H~~-dEiryil~G~g~f~v~~~~d-------------------------~~~~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
....|+|+. .|+.||++|+|++.+-+.+. +.+.-.+++||+++||+|..||...
T Consensus 275 ~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~ 354 (418)
T 3s7i_A 275 LMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINA 354 (418)
T ss_dssp EEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred eeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEEC
Confidence 478999975 89999999999999985432 4567889999999999999999877
Q ss_pred cCCCcEEEEEEecCC
Q 029255 145 DTDNYIKAMRLFVGD 159 (196)
Q Consensus 145 ~~~~~~~alRlF~~~ 159 (196)
+. + +..+-|++..
T Consensus 355 ~~-~-l~~v~f~~~~ 367 (418)
T 3s7i_A 355 SS-E-LHLLGFGINA 367 (418)
T ss_dssp SS-C-EEEEEEEESC
T ss_pred CC-C-EEEEEEEcCC
Confidence 54 3 6666555443
No 92
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.18 E-value=9.5e-06 Score=75.25 Aligned_cols=86 Identities=15% Similarity=0.253 Sum_probs=66.3
Q ss_pred eEEECCCCCCChHHH----------hhccccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecCCEEEeCCCCee
Q 029255 73 FCEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYH 140 (196)
Q Consensus 73 vv~l~p~~~p~~e~~----------~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~-d~~~~i~~~~GDlI~VPaG~~H 140 (196)
+..++...+|.+..+ .......|+|+. .|+.||++|+++..|-+.+ .+.+.-.+++||+++||+|..|
T Consensus 307 v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 307 LTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 345666667766553 124578999987 7999999999999998765 3466777999999999999999
Q ss_pred eeeecCCCcEEEEEEecCC
Q 029255 141 RFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 141 ~F~~~~~~~~~alRlF~~~ 159 (196)
.-.++. ..+..+-+|+..
T Consensus 387 ~~~ag~-e~~~~l~f~~s~ 404 (465)
T 3qac_A 387 VKQAFE-DGFEWVSFKTSE 404 (465)
T ss_dssp EEEEEE-EEEEEEEEESST
T ss_pred EEEcCC-CCeEEEEEecCC
Confidence 877664 357888888653
No 93
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.14 E-value=7.7e-06 Score=74.94 Aligned_cols=68 Identities=10% Similarity=0.130 Sum_probs=55.0
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC----------e---EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEE
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE----------K---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~~d----------~---~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRl 155 (196)
.....|+|+. .|+.||++|+|++.|-+.++ . .+.-.+++||+++||+|..|+...++ .+..+-|
T Consensus 277 ~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~--~~~~v~f 354 (434)
T 2ea7_A 277 ALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS--NLNFFAF 354 (434)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEE
T ss_pred eeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCC--CeEEEEE
Confidence 3478999996 79999999999999986532 1 44448999999999999999998773 3777777
Q ss_pred ecCC
Q 029255 156 FVGD 159 (196)
Q Consensus 156 F~~~ 159 (196)
|...
T Consensus 355 ~~~~ 358 (434)
T 2ea7_A 355 GINA 358 (434)
T ss_dssp EETC
T ss_pred ECCC
Confidence 7654
No 94
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.13 E-value=2e-06 Score=67.31 Aligned_cols=79 Identities=13% Similarity=0.002 Sum_probs=56.8
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcE
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 150 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~ 150 (196)
.-++.+.|+. .+..|.|..+|..|||+|+..+..++..+ ...+++||++.+|+|..|.+....+. .
T Consensus 46 ~~~~~~~pG~----------~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e~-~ 111 (145)
T 2o1q_A 46 TAIFDCPAGS----------SFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPVA-S 111 (145)
T ss_dssp EEEEEECTTE----------EECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEEE-E
T ss_pred EEEEEECCCC----------CCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCCC-e
Confidence 4567888764 37799999988899999998865432211 15799999999999999995333333 4
Q ss_pred EEEEEecCCCcee
Q 029255 151 KAMRLFVGDPVWT 163 (196)
Q Consensus 151 ~alRlF~~~~gW~ 163 (196)
.++-+|.++-.|+
T Consensus 112 ~~l~~~~gp~~f~ 124 (145)
T 2o1q_A 112 EFYMSFLGPLTFV 124 (145)
T ss_dssp EEEEEEESCEEEE
T ss_pred EEEEEECCcceec
Confidence 6666777765443
No 95
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.09 E-value=1.1e-05 Score=69.22 Aligned_cols=68 Identities=16% Similarity=0.263 Sum_probs=53.0
Q ss_pred eeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEE
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 151 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~ 151 (196)
-++++.|+. ..-..|+|..+|..|||+|+|.|.+. ++| +.+++||+|.+++|..|+|....+..+.
T Consensus 194 ~~~~l~pG~---------~i~~~~~h~~e~~~~il~G~~~~~~~---~~~--~~v~~GD~~~~~~~~~h~~~n~g~~~~~ 259 (278)
T 1sq4_A 194 NIVNFEPGG---------VIPFAETHVMEHGLYVLEGKAVYRLN---QDW--VEVEAGDFMWLRAFCPQACYSGGPGRFR 259 (278)
T ss_dssp EEEEECSSS---------EESCCCCCSEEEEEEEEECEEEEEET---TEE--EEEETTCEEEEEESCCEEEECCSSSCEE
T ss_pred EEEEECCCC---------CcCCCCCCCccEEEEEEeCEEEEEEC---CEE--EEeCCCCEEEECCCCCEEEEcCCCCCEE
Confidence 457777764 12224568889999999999999984 776 6899999999999999999876555455
Q ss_pred EE
Q 029255 152 AM 153 (196)
Q Consensus 152 al 153 (196)
.+
T Consensus 260 yl 261 (278)
T 1sq4_A 260 YL 261 (278)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 96
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.09 E-value=1.2e-05 Score=73.46 Aligned_cols=75 Identities=15% Similarity=0.256 Sum_probs=56.7
Q ss_pred cCCCeeeeEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeee
Q 029255 66 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 66 rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
.+|... .+++.|.. ++..| |.+ +|+.||++|+|...+-+.++. ....+++||+++||+|+.||...
T Consensus 42 ~~~~l~-~~~l~p~g----------l~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~~-~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 42 QNHRIV-QIEAKPNT----------LVLPK-HADADNILVIQQGQATVTVANGNNR-KSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp TTCEEE-EEEECTTE----------EEEEE-EESEEEEEEEEESEEEEEEECSSCE-EEEEEETTEEEEECTTCEEEEEE
T ss_pred cceEEE-EEEecCCc----------eeeee-eCCCCeEEEEEEeeEEEEEEecCCE-EEEEecCCCEEEECCCCeEEEEe
Confidence 466543 66677654 57788 765 999999999999999866544 45799999999999999999876
Q ss_pred -cCCCcEEEE
Q 029255 145 -DTDNYIKAM 153 (196)
Q Consensus 145 -~~~~~~~al 153 (196)
+.+..+..+
T Consensus 109 ~g~~~~l~i~ 118 (418)
T 3s7i_A 109 RHDNQNLRVA 118 (418)
T ss_dssp CCSSCCEEEE
T ss_pred cCCCccEEEE
Confidence 444444443
No 97
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.08 E-value=6.3e-06 Score=73.22 Aligned_cols=49 Identities=20% Similarity=0.170 Sum_probs=43.7
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
-..|.|...|++||++|+|.+.|. ++ ++.+++||+++||++..|.+..+
T Consensus 281 ~~~H~h~~~ev~~v~~G~g~~~v~---~~--~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 281 SRVARTTDSTIYHVVEGSGQVIIG---NE--TFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp CCCBEESSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEE
T ss_pred CCceecCCcEEEEEEeCeEEEEEC---CE--EEEEcCCCEEEECCCCeEEEEeC
Confidence 456999999999999999999994 44 58999999999999999999875
No 98
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.01 E-value=2.7e-05 Score=71.63 Aligned_cols=68 Identities=13% Similarity=0.204 Sum_probs=55.2
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC---------e--EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEec
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE---------K--WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~~d---------~--~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~ 157 (196)
.....|+|+. .|+.||++|+|++.|-+.++ . .+.-.+++||+++||+|..|+-..+ + .+..+-|++
T Consensus 292 ~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~-~~~~v~f~~ 369 (445)
T 2cav_A 292 ALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-S-DLNMVGIGV 369 (445)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-S-SEEEEEEEE
T ss_pred ceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-C-CeEEEEEEc
Confidence 4588999987 89999999999999987653 3 5788899999999999999998877 3 366676764
Q ss_pred CC
Q 029255 158 GD 159 (196)
Q Consensus 158 ~~ 159 (196)
..
T Consensus 370 ~~ 371 (445)
T 2cav_A 370 NA 371 (445)
T ss_dssp SC
T ss_pred cC
Confidence 44
No 99
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.97 E-value=3.7e-06 Score=61.62 Aligned_cols=62 Identities=15% Similarity=0.058 Sum_probs=48.1
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEE
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRl 155 (196)
..+|.|.. .|+++|++|++.+... ++....+.+.+||.+.+|+|+.|+.....+..+..|.+
T Consensus 30 ~~~H~H~~~~e~~~v~~G~~~v~~~--d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred cCcEECCCcEEEEEEeccEEEEEeC--CCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 67999987 5788888999987764 44433567899999999999999998766666776655
No 100
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.97 E-value=1.9e-05 Score=73.28 Aligned_cols=80 Identities=11% Similarity=0.181 Sum_probs=62.1
Q ss_pred CCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC-Ce-------------------------
Q 029255 67 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EK------------------------- 120 (196)
Q Consensus 67 Gy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~-d~------------------------- 120 (196)
||. .=.+++.|.. +...|+|+..|+.||++|+|++.+-..+ .+
T Consensus 42 gvs-~~r~~i~p~G----------l~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~ 110 (466)
T 3kgl_A 42 GVS-FVRYIIESKG----------LYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQ 110 (466)
T ss_dssp TEE-EEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-------------
T ss_pred CeE-EEEEEECCCC----------EeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccc
Confidence 774 3556677654 6889999999999999999999986431 00
Q ss_pred ----------------------------------EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 121 ----------------------------------WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 121 ----------------------------------~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
.+ ..+++||+|.||||+.||...+.+..+.++-++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 111 GQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKV-EHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDL 181 (466)
T ss_dssp ----------------------------CCEEESCE-EEEETTEEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred ccccccccccccccccccccccccccccccccceee-ccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcC
Confidence 11 37899999999999999998876666777777644
No 101
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.89 E-value=1.4e-05 Score=58.78 Aligned_cols=62 Identities=15% Similarity=0.087 Sum_probs=43.9
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEE
Q 029255 92 FEEHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 92 ~~eH~H~~d-Eiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRl 155 (196)
..+|.|..+ ++.++++|++.+... ++++..+.+++||.+.+|+|+.|++....+..+..+-+
T Consensus 30 ~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 579999876 444556777666553 45433468999999999999999998766555554433
No 102
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.85 E-value=4.2e-05 Score=64.34 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=42.5
Q ss_pred CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEE
Q 029255 98 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 98 ~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRl 155 (196)
..+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++....+...+.+-+
T Consensus 80 ~~ee~~~Vl~G~l~~~~~---~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAE---GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp TEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 458999999999999984 55 478999999999999999998765444444433
No 103
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.84 E-value=4.8e-05 Score=60.78 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=71.1
Q ss_pred CeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec--C
Q 029255 69 SYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD--T 146 (196)
Q Consensus 69 ~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~--~ 146 (196)
...-++.+.|+. .+..|.|...|..|||+|+..|+- ++ ..+.+||++..|+|..|..... .
T Consensus 42 ~~v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~e---~~----~~~~~Gd~~~~P~g~~H~~~~~~~~ 104 (159)
T 3ebr_A 42 ETITLLKAPAGM----------EMPRHHHTGTVIVYTVQGSWRYKE---HD----WVAHAGSVVYETASTRHTPQSAYAE 104 (159)
T ss_dssp EEEEEEEECSSC----------BCCCEEESSCEEEEEEESCEEETT---SS----CCBCTTCEEEECSSEEECEEESSSS
T ss_pred eEEEEEEECCCC----------CcccccCCCCEEEEEEEeEEEEeC---CC----eEECCCeEEEECCCCcceeEeCCCC
Confidence 455778888775 378999999999999999977642 23 2588999999999999999876 3
Q ss_pred CCcEEEEEE------ecCCCceeecCCCCCCchhHHHHHHHHhhccCCCCCc
Q 029255 147 DNYIKAMRL------FVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPI 192 (196)
Q Consensus 147 ~~~~~alRl------F~~~~gW~~~~r~~d~~~~r~~yl~~~~~~~~~~~~~ 192 (196)
+..++++-. |.++.|.+- ++ .|.......|.+.....+-++-.+
T Consensus 105 ~e~~~~~~~~~G~l~~~~~~g~~~-~~-~d~~~~~~~~~~~~~~~g~~~~~~ 154 (159)
T 3ebr_A 105 GPDIITFNIVAGELLYLDDKDNII-AV-ENWKTSMDRYLNYCKAHGIRPKDL 154 (159)
T ss_dssp SSCEEEEEEEESCEEEECTTCCEE-EE-ECHHHHHHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEecCccEecCCCCCEE-EE-cCHHHHHHHHHHHHHHcCCCcccc
Confidence 444555543 444444222 11 255566666777776555444444
No 104
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.83 E-value=4.8e-05 Score=62.33 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=43.4
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEE
Q 029255 91 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMR 154 (196)
Q Consensus 91 f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alR 154 (196)
.+..|.|...|+.|||+|+ |. +.+ -.+.+||+|.+|+|+.|.+..+....+.++-
T Consensus 137 ~~p~H~H~g~E~~~VL~G~--f~--de~-----~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 137 AVPDHGHRGLELTLVLQGA--FR--DET-----DRFGAGDIEIADQELEHTPVAERGLDCICLA 191 (195)
T ss_dssp BCCCCCCSSCEEEEEEESE--EE--CSS-----SEEETTCEEEECSSCCCCCEECSSSCEEEEE
T ss_pred CCCCcCCCCeEEEEEEEEE--EE--CCc-----EEECCCeEEEeCcCCccCCEeCCCCCEEEEE
Confidence 3889999999999999998 33 232 2588999999999999999986444455543
No 105
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.78 E-value=6e-05 Score=57.86 Aligned_cols=52 Identities=13% Similarity=0.252 Sum_probs=42.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+.++.+.++|..|||+|++.+... +++ .+.+++||++++|+|..-..+..+.
T Consensus 54 ~~~~~~~~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 54 YNYAGRDLEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp EEECCCSEEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred eECeeCCCcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 556666678999999999998875 344 4799999999999999998877555
No 106
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.77 E-value=4.5e-05 Score=68.84 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=45.5
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
-..|.|...+|++|++|+|+..|. ++ ++.+++||+++||++..|++..+++
T Consensus 292 t~~hRht~s~Vy~V~eG~G~~~I~---~~--~~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 292 TATRNEVGSTVFQVFEGAGAVVMN---GE--TTKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp CCCEEESSCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEESSS
T ss_pred cCCeeccccEEEEEEeCcEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 578999999999999999999995 44 5889999999999999999987643
No 107
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.74 E-value=6.9e-05 Score=63.62 Aligned_cols=52 Identities=8% Similarity=0.079 Sum_probs=41.6
Q ss_pred cCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEE
Q 029255 97 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 153 (196)
Q Consensus 97 H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~al 153 (196)
|..+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++....+...+.+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~---~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l 133 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDG---QE--THELEAGGYAYFTPEMKMYLANAQEADTEVF 133 (274)
T ss_dssp TTEEEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTSCCEEEESSSSCEEEE
T ss_pred CCceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 3458999999999999985 44 3689999999999999999987654434333
No 108
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.71 E-value=0.00012 Score=60.83 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=49.6
Q ss_pred eeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
+++.++... ...+..|.|++-|+.||++|+|. .+.+.+... +.+.+||+++||+|..|.+...
T Consensus 10 ~~~~~~~~~--------~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~--~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 10 NVYRMSKFD--------TYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVS--YEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEECTTC--------EEEEEEEECSSCEEEEESSSCEE-EEETTTTEE--EEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhccc--------chhccHhhhcceEEEEEecCceE-EECCcccee--EEEcCCCEEEEcCCCceeeccc
Confidence 566666543 34578899999999999999999 886221112 6799999999999999999876
No 109
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.71 E-value=7e-05 Score=61.28 Aligned_cols=58 Identities=26% Similarity=0.448 Sum_probs=45.1
Q ss_pred cccccccCc-------ceEEEEEeceEEEEEEeCCC----------------eEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 91 FFEEHLHTD-------EEIRYCVAGSGYFDVRDRNE----------------KWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 91 f~~eH~H~~-------dEiryil~G~g~f~v~~~~d----------------~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
..++|.|.. .|-++++.|.+++.+.+..- -+-.+.++|||.|.||+|++|||.+++.
T Consensus 65 ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~agee 144 (175)
T 2y0o_A 65 TCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGEE 144 (175)
T ss_dssp EEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEEEE
T ss_pred cCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeCCC
Confidence 378999975 57777999999998853210 0135799999999999999999998554
Q ss_pred C
Q 029255 148 N 148 (196)
Q Consensus 148 ~ 148 (196)
.
T Consensus 145 g 145 (175)
T 2y0o_A 145 G 145 (175)
T ss_dssp E
T ss_pred C
Confidence 3
No 110
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.65 E-value=7.2e-05 Score=64.73 Aligned_cols=79 Identities=10% Similarity=0.000 Sum_probs=55.6
Q ss_pred eeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEE
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 151 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~ 151 (196)
=++++.|+. . ...|.|..+|+.||++|++.+.+. +++ ...+++||.+.+|+|..|++...+.-.+.
T Consensus 73 ~lv~l~PGg---------~-s~~~~h~~EEfiyVleG~l~l~l~--~g~--~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l 138 (266)
T 4e2q_A 73 YLAKMKEMS---------S-SGLPPQDIERLIFVVEGAVTLTNT--SSS--SKKLTVDSYAYLPPNFHHSLDCVESATLV 138 (266)
T ss_dssp EEEEECSSE---------E-CCCCCTTEEEEEEEEEECEEEEC----CC--CEEECTTEEEEECTTCCCEEEESSCEEEE
T ss_pred EEEEECcCC---------c-CCCCCCCCeEEEEEEEEEEEEEEC--CCc--EEEEcCCCEEEECCCCCEEEEeCCCEEEE
Confidence 366777764 1 244788889999999999999985 133 36899999999999999999875432222
Q ss_pred -EEEEecCCCceee
Q 029255 152 -AMRLFVGDPVWTP 164 (196)
Q Consensus 152 -alRlF~~~~gW~~ 164 (196)
..+-|...+|..|
T Consensus 139 ~V~k~y~~~~g~~p 152 (266)
T 4e2q_A 139 VFERRYEYLGSHTT 152 (266)
T ss_dssp EEEEECCCCTTCCC
T ss_pred EEEeEeeeCCCCCC
Confidence 2233555566443
No 111
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.59 E-value=0.00014 Score=68.41 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=63.6
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC-----------------
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN----------------- 118 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~----------------- 118 (196)
.+.|+-+ |. ..=.++|.|.. +...|+|+..|+.||+.|+|++.+-.++
T Consensus 40 ~p~l~~~----Gv-s~~R~~i~p~G----------l~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~ 104 (531)
T 3fz3_A 40 QGDFQCA----GV-AASRITIQRNG----------LHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQ 104 (531)
T ss_dssp SHHHHHH----TE-EEEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEECCCC-------
T ss_pred ChhhccC----cc-eEEEEEecCCC----------EeCCccCCCCeEEEEEECcEEEEEEcCCCcccccccccccccccc
Confidence 3555554 43 44566777654 5889999999999999999999985331
Q ss_pred ---------------------------------------------------------------C--eEEEEEEecCCEEE
Q 029255 119 ---------------------------------------------------------------E--KWIRIWVKKGGMIV 133 (196)
Q Consensus 119 ---------------------------------------------------------------d--~~~~i~~~~GDlI~ 133 (196)
| +.+ ..+++||+|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~vr~GDvia 183 (531)
T 3fz3_A 105 QEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKT-RRIREGDVVA 183 (531)
T ss_dssp ------------------------------------------------------------CCSCEESCC-EEEETTEEEE
T ss_pred ccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceee-ecccCCcEEE
Confidence 1 112 4689999999
Q ss_pred eCCCCeeeeeecCCCcEEEEEEe
Q 029255 134 LPAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 134 VPaG~~H~F~~~~~~~~~alRlF 156 (196)
||||+.||...+.+..+++|-++
T Consensus 184 iPaG~~~w~yN~G~~~l~iv~~~ 206 (531)
T 3fz3_A 184 IPAGVAYWSYNDGDQELVAVNLF 206 (531)
T ss_dssp ECTTCCEEEECCSSSCEEEEEEE
T ss_pred ECCCCeEEEEeCCCceEEEEEEE
Confidence 99999999998777777777665
No 112
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.31 E-value=0.0014 Score=55.90 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=39.5
Q ss_pred cCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCC
Q 029255 97 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 97 H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~ 148 (196)
++.+|+.|||+|+..... +++ .+.+++||+++||+|+.|++...+.-
T Consensus 63 ~p~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~ 109 (238)
T 3myx_A 63 YPYTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPES 109 (238)
T ss_dssp CSSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTE
T ss_pred CCCcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCe
Confidence 445899999999988776 344 57899999999999999999987664
No 113
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.29 E-value=0.00056 Score=54.97 Aligned_cols=60 Identities=20% Similarity=0.313 Sum_probs=47.0
Q ss_pred eeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 71 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 71 ~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
.-++.+.|+. .+..|.|...|..|||+|+..+. .++. ..+++||.+.+|+|..|.+...+
T Consensus 45 v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~f~~~---~~~~---~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 45 VMRASFAPGL----------TLPLHFHTGTVHMYTISGCWYYT---EYPG---QKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEECTTC----------BCCEEEESSCEEEEEEESEEEET---TCTT---SCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEECCCC----------cCCcccCCCCEEEEEEEEEEEEC---CCce---EEECCCeEEEeCCCCceeeEeCC
Confidence 4577777764 37899999999999999997662 1212 25789999999999999988754
No 114
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.26 E-value=0.00028 Score=59.15 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=37.6
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
.+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++...
T Consensus 68 ~ee~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVG---GE--TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp SEEEEEEEEEEEEEECS---SC--EEEECTTEEEEECTTCCCEEEEE
T ss_pred eeEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeC
Confidence 78999999999999985 44 37899999999999999999876
No 115
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.24 E-value=0.001 Score=57.19 Aligned_cols=61 Identities=25% Similarity=0.397 Sum_probs=47.6
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecC---CEEEeCCCCeeeeeecCCCcEEEE
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKG---GMIVLPAGCYHRFTLDTDNYIKAM 153 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~-d~~~~i~~~~G---DlI~VPaG~~H~F~~~~~~~~~al 153 (196)
-.+|.|.. .|.++|++|++.+++++.. ++|+.+.+ .| +.+.||+|..|-|....+.....|
T Consensus 285 rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 285 KGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYV-SGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEE-ETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEe-cCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 46899986 7999999999999999764 56655444 26 999999999999987664444444
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.23 E-value=0.00051 Score=57.62 Aligned_cols=64 Identities=17% Similarity=0.129 Sum_probs=48.2
Q ss_pred eeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEE
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 151 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~ 151 (196)
-++.+.|+. .+..|.|...|..|||+|+.. +. + -.+.+||++.+|+|+.|...+ ++..+.
T Consensus 46 ~lvr~~pG~----------~~p~H~H~g~Ee~~VL~G~f~----d~-~----~~~~~Gd~~~~P~g~~H~p~a-~~gc~~ 105 (223)
T 3o14_A 46 SIVRYAPGS----------RFSAHTHDGGEEFIVLDGVFQ----DE-H----GDYPAGTYVRNPPTTSHVPGS-AEGCTI 105 (223)
T ss_dssp EEEEECTTE----------ECCCEECTTCEEEEEEEEEEE----ET-T----EEEETTEEEEECTTCEECCEE-SSCEEE
T ss_pred EEEEECCCC----------CcccccCCCCEEEEEEEeEEE----EC-C----eEECCCeEEEeCCCCccccEe-CCCCEE
Confidence 467777663 478999999999999999843 22 2 268999999999999999887 455544
Q ss_pred EEEE
Q 029255 152 AMRL 155 (196)
Q Consensus 152 alRl 155 (196)
-+.+
T Consensus 106 ~vk~ 109 (223)
T 3o14_A 106 FVKL 109 (223)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.14 E-value=0.00069 Score=54.23 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=55.6
Q ss_pred hcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeee
Q 029255 65 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 65 ~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
+.| .+.-++.+-|+. .|..|.|+..|..|+|+|+-.+.-++..+.| ...+|+++.-|+|..|....
T Consensus 43 e~g-~~t~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~---~~~aGsYv~ePpGs~H~p~~ 108 (153)
T 3bal_A 43 ETS-SWTAIFNCPAGS----------SFASHIHAGPGEYFLTKGKMEVRGGEQEGGS---TAYAPSYGFESSGALHGKTF 108 (153)
T ss_dssp TTT-EEEEEEEECTTE----------EECCEEESSCEEEEEEESEEEETTCGGGTSE---EEESSEEEEECTTCEESCCE
T ss_pred ccc-eEEEEEEeCCCC----------CccCccCCCCEEEEEEEEEEEecCccccCcc---ccCCCeEEEcCCCCccccee
Confidence 345 466788887764 4899999999999999999766543221234 46899999999999998654
Q ss_pred cCCCcEEEEEEecCC
Q 029255 145 DTDNYIKAMRLFVGD 159 (196)
Q Consensus 145 ~~~~~~~alRlF~~~ 159 (196)
.++.. .++-.+.++
T Consensus 109 ~~~~~-~~~~~~~Gp 122 (153)
T 3bal_A 109 FPVES-QFYMTFLGP 122 (153)
T ss_dssp ESSCE-EEEEEEESC
T ss_pred CCCCe-EEEEEEECC
Confidence 44433 333344444
No 118
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.62 E-value=0.0038 Score=53.14 Aligned_cols=47 Identities=17% Similarity=0.271 Sum_probs=38.6
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 96 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 96 ~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
.|..+|..|||+|++.+... +++ .+.+++||++++|+|..=.++..+
T Consensus 183 ~~~~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 183 PHKIHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp ECSSCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred cCCCCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEECc
Confidence 34678999999999888764 455 478999999999999998887654
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.45 E-value=0.013 Score=45.99 Aligned_cols=60 Identities=18% Similarity=0.226 Sum_probs=44.9
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCE-EEeCCCCeeeeeecCCCcEEEE
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM-IVLPAGCYHRFTLDTDNYIKAM 153 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDl-I~VPaG~~H~F~~~~~~~~~al 153 (196)
-.+|.|.. .|.+++++|+..+.+.+... .-++.+...+. |.||+|+.|.+..-+++ .+++
T Consensus 48 RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~-~~~~~L~~~~~gL~IppgvWh~~~~~s~~-avll 109 (141)
T 2pa7_A 48 RGFHAHKKLEQVLVCLNGSCRVILDDGNI-IQEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMM 109 (141)
T ss_dssp EEEEEESSCCEEEEEEESCEEEEEECSSC-EEEEEECCTTEEEEECTTCEEEEECCCTT-CEEE
T ss_pred ECcCcCCCceEEEEEEccEEEEEEECCcE-EEEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEE
Confidence 46899976 89999999999999964333 33566665555 99999999999765554 3444
No 120
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=95.60 E-value=0.043 Score=45.34 Aligned_cols=58 Identities=14% Similarity=0.066 Sum_probs=47.7
Q ss_pred cccccccCcceEEEEEe-ceEEEEEEeCC-----CeEEEEEEecCCEEEeCCCCeeeeeecCCC
Q 029255 91 FFEEHLHTDEEIRYCVA-GSGYFDVRDRN-----EKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 91 f~~eH~H~~dEiryil~-G~g~f~v~~~~-----d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~ 148 (196)
.--.|.|....+..++. |+.+-.+-|.. ++|..+.+..+-.|.||+|+-|.|..-+++
T Consensus 72 lRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 72 LRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred cceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 35688898899999999 99755554444 679999999999999999999999876654
No 121
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=95.55 E-value=0.044 Score=44.74 Aligned_cols=56 Identities=20% Similarity=0.424 Sum_probs=44.1
Q ss_pred cccccc---CcceEEEEEeceEE---EEEEeCC----CeEEEEEEec--CCEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLH---TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H---~~dEiryil~G~g~---f~v~~~~----d~~~~i~~~~--GDlI~VPaG~~H~F~~~~~~ 148 (196)
--.|.| ...++..++.|++. +++| .+ ++|..+.+.+ +-.|.||+|.-|-|..-+++
T Consensus 61 RGlH~q~p~~q~klv~vv~G~v~dV~VD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 61 RGLHFQREKPQGKLVRVIRGEIFDVAVDLR-KNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECC-TTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred ecceecCCccccEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 457877 56899999999986 5555 22 4798888876 57899999999999876664
No 122
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.32 E-value=0.06 Score=43.90 Aligned_cols=56 Identities=20% Similarity=0.392 Sum_probs=44.0
Q ss_pred cccccc---CcceEEEEEeceEE---EEEEeCC----CeEEEEEEec--CCEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLH---TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H---~~dEiryil~G~g~---f~v~~~~----d~~~~i~~~~--GDlI~VPaG~~H~F~~~~~~ 148 (196)
--.|.| ....+..++.|+++ +++| .+ ++|..+.+.+ +-.|.||+|.-|-|..-+++
T Consensus 62 RG~H~q~p~~q~Klv~vv~G~v~dV~vD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 62 RGLHYQIRQAQGKLVRATLGEVFDVAVDLR-RGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECB-TTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeEEeCCCCCcCEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 457877 56899999999986 5555 22 4788888876 57899999999999876664
No 123
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=95.27 E-value=0.16 Score=41.08 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=45.5
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeC--C----CeEEEEEEe---cCCEEEeCCCCeeeeeecCC
Q 029255 92 FEEHLHT-DEEIRYCVAGSGYFDVRDR--N----EKWIRIWVK---KGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 92 ~~eH~H~-~dEiryil~G~g~f~v~~~--~----d~~~~i~~~---~GDlI~VPaG~~H~F~~~~~ 147 (196)
--.|.|. ..+...++.|++...+.|. + ++|..+.+. +.-.|.||+|+-|-|..-++
T Consensus 66 RG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 66 KAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred ECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 4588886 4899999999999888643 2 568888888 56789999999999986555
No 124
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=95.23 E-value=0.058 Score=43.77 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=60.6
Q ss_pred hcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceE-EEEEEeCCCeEEEEE----EecCCE--EEeCCC
Q 029255 65 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIW----VKKGGM--IVLPAG 137 (196)
Q Consensus 65 ~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g-~f~v~~~~d~~~~i~----~~~GDl--I~VPaG 137 (196)
.|...+.=-+-|.++. +-.+|....+|++|+..|++ .+.+-+.+++...+. +.+|+. ++||+|
T Consensus 45 ~R~~~T~IYfLL~~g~----------~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G 114 (170)
T 1yud_A 45 SRQLWSSIYFLLRTGE----------VSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKG 114 (170)
T ss_dssp SSBSCEEEEEEEETTC----------CEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTT
T ss_pred CCccceEEEEEECCCC----------CCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCC
Confidence 4555555555566543 46788888899999999997 666655666654555 456888 999999
Q ss_pred CeeeeeecCCCcEEEEEEecCCCceee
Q 029255 138 CYHRFTLDTDNYIKAMRLFVGDPVWTP 164 (196)
Q Consensus 138 ~~H~F~~~~~~~~~alRlF~~~~gW~~ 164 (196)
+.+........+ ++-..+-.|||.-
T Consensus 115 ~wqaa~~~~g~~--~LV~C~VaPGF~f 139 (170)
T 1yud_A 115 CIFGSAMNQDGF--SLVGCMVSPGFTF 139 (170)
T ss_dssp CEEEEEESSSSE--EEEEEEESSCCCG
T ss_pred CEEEEEECCCCc--EEEEEEECCCccC
Confidence 999887653332 4445556678764
No 125
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.22 E-value=0.08 Score=43.12 Aligned_cols=56 Identities=18% Similarity=0.468 Sum_probs=43.5
Q ss_pred cccccc----CcceEEEEEeceEE---EEEEeCC----CeEEEEEEec--CCEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLH----TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H----~~dEiryil~G~g~---f~v~~~~----d~~~~i~~~~--GDlI~VPaG~~H~F~~~~~~ 148 (196)
--.|.| ....+..++.|+++ +++| .+ ++|..+.+.+ +-.|.||+|.-|-|..-+++
T Consensus 60 RGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 60 RGLHFQRGENAQGKLVRCAVGEVFDVAVDIR-KESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp EEEEEECGGGCCCEEEEEEESEEEEEEEECC-TTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeeEccCCCCCCcEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 457877 45899999999986 5555 23 5688888876 47899999999999876664
No 126
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=95.18 E-value=0.036 Score=47.48 Aligned_cols=58 Identities=24% Similarity=0.248 Sum_probs=41.6
Q ss_pred ccccccccCc-ceEEEEEec---eEEEEEEeCC-------------CeE------EEEEEecCCEEEeCCCCeeeeeecC
Q 029255 90 NFFEEHLHTD-EEIRYCVAG---SGYFDVRDRN-------------EKW------IRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G---~g~f~v~~~~-------------d~~------~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
+-.++|.|.. .|-++..-| ..+....+.+ +.. -.|.+.||+-|.||+|++|||-..+
T Consensus 117 Q~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 117 QVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEA 196 (246)
T ss_dssp CEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEECT
T ss_pred CCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEecC
Confidence 4478999987 777777776 3344444322 111 1468899999999999999999877
Q ss_pred C
Q 029255 147 D 147 (196)
Q Consensus 147 ~ 147 (196)
.
T Consensus 197 g 197 (246)
T 3kmh_A 197 G 197 (246)
T ss_dssp T
T ss_pred C
Confidence 6
No 127
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=95.15 E-value=0.13 Score=41.41 Aligned_cols=70 Identities=13% Similarity=0.157 Sum_probs=54.2
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEe-CCCe---EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCC
Q 029255 91 FFEEHLHTD-EEIRYCVAGSGYFDVRD-RNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 160 (196)
Q Consensus 91 f~~eH~H~~-dEiryil~G~g~f~v~~-~~d~---~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~ 160 (196)
.-..|-|.. ..+..||+|+....+-. .++. .-...+.+||.++.|+|-.|++....+.....|.+|.++-
T Consensus 81 ~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp~ 155 (171)
T 3eqe_A 81 ETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPL 155 (171)
T ss_dssp BCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESCC
T ss_pred CcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCCc
Confidence 356799997 67888999999876422 1221 1246789999999999999999876667789999999873
No 128
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=94.92 E-value=0.3 Score=37.92 Aligned_cols=75 Identities=17% Similarity=0.193 Sum_probs=55.0
Q ss_pred HHhhcccccc----ccCc-ceEEEEEeceEEEEEEeCCCe---EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEec
Q 029255 86 EKIKNFFEEH----LHTD-EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 86 ~~~~~f~~eH----~H~~-dEiryil~G~g~f~v~~~~d~---~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~ 157 (196)
...+.|..-| ||.. -+..-|++|+..|..=+.++. --.+...+|+..+||++..|+...-+++-.--|.||.
T Consensus 21 tlP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc 100 (127)
T 3bb6_A 21 TAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFV 100 (127)
T ss_dssp TSCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEE
T ss_pred cChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEe
Confidence 3347788888 5876 588889999999885323222 1247889999999999999999975554444588887
Q ss_pred CCC
Q 029255 158 GDP 160 (196)
Q Consensus 158 ~~~ 160 (196)
.++
T Consensus 101 ~~~ 103 (127)
T 3bb6_A 101 APE 103 (127)
T ss_dssp CHH
T ss_pred CCc
Confidence 654
No 129
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=94.80 E-value=0.1 Score=43.37 Aligned_cols=57 Identities=16% Similarity=0.308 Sum_probs=44.6
Q ss_pred ccccccC----cceEEEEEeceE---EEEEEeCC---CeEEEEEEec--CCEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLHT----DEEIRYCVAGSG---YFDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H~----~dEiryil~G~g---~f~v~~~~---d~~~~i~~~~--GDlI~VPaG~~H~F~~~~~~ 148 (196)
--.|.|. ..++..++.|++ .+++|... ++|..+.+.+ +-.|.||+|.-|-|..-+++
T Consensus 83 RGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 83 RGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp EEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred eEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 4577774 689999999998 56666221 5788888875 78899999999999876654
No 130
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=94.78 E-value=0.18 Score=41.47 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=54.3
Q ss_pred ccccccccCcceEEEEEeceEEEEEEe--CCCeEE----EEEEecCCEEEeCC--CCeeeeeec-CCCcEEEEEEecCCC
Q 029255 90 NFFEEHLHTDEEIRYCVAGSGYFDVRD--RNEKWI----RIWVKKGGMIVLPA--GCYHRFTLD-TDNYIKAMRLFVGDP 160 (196)
Q Consensus 90 ~f~~eH~H~~dEiryil~G~g~f~v~~--~~d~~~----~i~~~~GDlI~VPa--G~~H~F~~~-~~~~~~alRlF~~~~ 160 (196)
+.-..|-|....+.+||+|+..-.+=. .++..+ +..+.+|+.+.+++ |--|+.... .+...+.|.+|..+-
T Consensus 90 q~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~~~ 169 (208)
T 2gm6_A 90 QRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGANI 169 (208)
T ss_dssp CBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSCG
T ss_pred cccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcCCC
Confidence 457899999999999999999765521 222221 46899999999999 889998843 455689999997754
No 131
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.61 E-value=0.057 Score=50.10 Aligned_cols=55 Identities=7% Similarity=0.055 Sum_probs=41.9
Q ss_pred CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEec
Q 029255 98 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 98 ~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~ 157 (196)
+.|++.++-+|++.+.-+ - + .+.+++||+++||.||.++..+....+.-++-.|.
T Consensus 177 DGD~Livpq~G~l~i~TE-f-G---~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~g 231 (471)
T 1eyb_A 177 DGDFLIVPQKGNLLIYTE-F-G---KMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYG 231 (471)
T ss_dssp SEEEEEEEEESCEEEEET-T-E---EEEECTTEEEEECTTCCEEEECSSSEEEEEEEEES
T ss_pred CCCEEEEEEeCCEEEEEe-c-c---cEEeccCCEEEECCccEEEEeeCCCceEEEEEccC
Confidence 349999999999888775 2 3 48999999999999999999886533333444443
No 132
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=94.33 E-value=0.13 Score=43.03 Aligned_cols=57 Identities=21% Similarity=0.298 Sum_probs=43.9
Q ss_pred ccccccC----cceEEEEEeceEE---EEEEeC---CCeEEEEEEecC--CEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H~----~dEiryil~G~g~---f~v~~~---~d~~~~i~~~~G--DlI~VPaG~~H~F~~~~~~ 148 (196)
--.|.|. ...+..++.|+++ +++|.. -++|..+.+... -.|.||+|.-|-|..-+++
T Consensus 68 RGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 68 RGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp EEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred EcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 4577775 5899999999986 555521 156888888875 6899999999999876664
No 133
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=94.02 E-value=0.045 Score=45.68 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=38.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCc
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 149 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~ 149 (196)
+..|.|..+|+ |||+|+. .- . + -.+.+|+.|.+|+|..|.+.++++..
T Consensus 159 ~~~~~hgG~Ei-lVL~G~~--~d--~-~----~~~~~GsWlR~P~gs~h~~~ag~~g~ 206 (223)
T 3o14_A 159 LTSEAAGGIEV-LVLDGDV--TV--N-D----EVLGRNAWLRLPEGEALSATAGARGA 206 (223)
T ss_dssp EEECCSSCEEE-EEEEEEE--EE--T-T----EEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred cCCCCCCcEEE-EEEEeEE--EE--C-C----ceECCCeEEEeCCCCccCcEECCCCe
Confidence 78899966887 9999994 32 2 3 26889999999999999998866543
No 134
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.35 E-value=0.35 Score=38.35 Aligned_cols=52 Identities=13% Similarity=0.307 Sum_probs=38.5
Q ss_pred cccCcceEEEEEeceEEEEEEeCC----------------------------------CeEEEEEEecCCEEEeCCCCee
Q 029255 95 HLHTDEEIRYCVAGSGYFDVRDRN----------------------------------EKWIRIWVKKGGMIVLPAGCYH 140 (196)
Q Consensus 95 H~H~~dEiryil~G~g~f~v~~~~----------------------------------d~~~~i~~~~GDlI~VPaG~~H 140 (196)
|.-..+-+...+.|+=.+.+-..+ -..+.+.+++||+|.||+|-.|
T Consensus 140 H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H 219 (235)
T 4gjz_A 140 HQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWH 219 (235)
T ss_dssp ECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCEE
T ss_pred eeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCcE
Confidence 333446677788999999884221 1346789999999999999999
Q ss_pred eeeecC
Q 029255 141 RFTLDT 146 (196)
Q Consensus 141 ~F~~~~ 146 (196)
....-+
T Consensus 220 ~V~~l~ 225 (235)
T 4gjz_A 220 YVRALD 225 (235)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 876543
No 135
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=93.06 E-value=0.22 Score=43.53 Aligned_cols=52 Identities=12% Similarity=0.155 Sum_probs=41.7
Q ss_pred ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecC
Q 029255 100 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 158 (196)
Q Consensus 100 dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~ 158 (196)
|=.+++|+|+....+. ++ ...+.+||.|.||||+.|.+...++ .++|.+-.+
T Consensus 227 d~wiWqLEGss~Vt~~---~q--~~~L~~~DsLLIpa~~~y~~~r~~g--sv~L~I~~~ 278 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMG---GR--RLSLAPDDSLLVLAGTSYAWERTQG--SVALSVTQD 278 (286)
T ss_dssp CEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEECTT--CEEEEEEEC
T ss_pred cEEEEEEcCceEEEEC---Ce--EEeccCCCEEEecCCCeEEEEecCC--eEEEEEEEC
Confidence 6678999999876663 55 4789999999999999999998777 466666544
No 136
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=93.00 E-value=0.52 Score=38.81 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=43.5
Q ss_pred cccccccC----cceEEEEEeceEEE---EEEeCC----CeEEEEEEec--CCEEEeCCCCeeeeeecCCC
Q 029255 91 FFEEHLHT----DEEIRYCVAGSGYF---DVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 91 f~~eH~H~----~dEiryil~G~g~f---~v~~~~----d~~~~i~~~~--GDlI~VPaG~~H~F~~~~~~ 148 (196)
.--.|.|. ...+..++.|+++. ++| .+ ++|..+.+.. +-.|.||+|.-|-|..-+++
T Consensus 77 lRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR-~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 77 VRGLHYQRTPKEQGKIIFVPKGRILDVAVDVR-KSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp EEEEEEECTTSCCEEEEEEEESEEEEEEEECB-TTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred ceeEEccCCCCCCceEEEEeCCEEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 34578775 57899999999865 444 22 4688888885 68899999999999876663
No 137
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=92.81 E-value=0.56 Score=38.81 Aligned_cols=56 Identities=23% Similarity=0.472 Sum_probs=43.0
Q ss_pred ccccccC----cceEEEEEeceEE---EEEEeCC----CeEEEEEEec--CCEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLHT----DEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H~----~dEiryil~G~g~---f~v~~~~----d~~~~i~~~~--GDlI~VPaG~~H~F~~~~~~ 148 (196)
--.|.|. ...+..++.|+++ +++| .+ ++|..+.+.+ +-.|.||+|.-|-|..-+++
T Consensus 60 RGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR-~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 60 RGIHYTVTPPGTAKYVYCARGKAMDIVIDIR-VGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp EEEEEECTTTCCCEEEEEEESCEEEEEECCC-BTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred eeeeccCCCCCCceEEEEeCCEEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 4577775 5899999999986 4444 22 4688888876 47899999999999876665
No 138
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=92.13 E-value=0.81 Score=38.49 Aligned_cols=57 Identities=25% Similarity=0.425 Sum_probs=43.2
Q ss_pred ccccccC----cceEEEEEeceEE---EEEEeC---CCeEEEEEEecC--CEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H~----~dEiryil~G~g~---f~v~~~---~d~~~~i~~~~G--DlI~VPaG~~H~F~~~~~~ 148 (196)
--.|.|. ...+..++.|+++ +++|.. -++|..+.+... -.|.||+|.-|-|..-+++
T Consensus 79 RGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 79 RGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp EEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred eeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 4577775 5899999999986 444411 146888888875 7899999999999876665
No 139
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=91.70 E-value=0.65 Score=42.42 Aligned_cols=55 Identities=15% Similarity=0.245 Sum_probs=42.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----------------CeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRN----------------EKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~----------------d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
+..|.-..+=+...+.|+=.+.+-..+ ...+.+.+++||++.||+|..|.....+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 457776667777788899888886432 1135789999999999999999987654
No 140
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=91.45 E-value=2 Score=40.02 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=47.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCC--------------------eEEEEEEecCCEEEeCCCCeeeeeecCCCcEE
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVRDRNE--------------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 151 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~~~~d--------------------~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~ 151 (196)
+..|.=..+=+..-+.|+=.+.|....+ ..+.+.+++||++.||+|..|..+..++..-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 4556656666777788888888864321 13578999999999999999999887654445
Q ss_pred EEEEec
Q 029255 152 AMRLFV 157 (196)
Q Consensus 152 alRlF~ 157 (196)
.+.+-.
T Consensus 258 hlTi~~ 263 (489)
T 4diq_A 258 HLTLST 263 (489)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 555543
No 141
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=90.77 E-value=1 Score=39.38 Aligned_cols=66 Identities=9% Similarity=0.064 Sum_probs=47.7
Q ss_pred cccccCcceEEEEEeceEEEEEEeCC-----------------------------------CeEEEEEEecCCEEEeCCC
Q 029255 93 EEHLHTDEEIRYCVAGSGYFDVRDRN-----------------------------------EKWIRIWVKKGGMIVLPAG 137 (196)
Q Consensus 93 ~eH~H~~dEiryil~G~g~f~v~~~~-----------------------------------d~~~~i~~~~GDlI~VPaG 137 (196)
..|....+-+...+.|+=.+.+-... ...+.+.+++||+|.||+|
T Consensus 197 ~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~g 276 (349)
T 3d8c_A 197 PAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMY 276 (349)
T ss_dssp EEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEEEECTT
T ss_pred cceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEEEECCC
Confidence 34554456667778898887764211 1468899999999999999
Q ss_pred CeeeeeecC-CCcEEEEEEecC
Q 029255 138 CYHRFTLDT-DNYIKAMRLFVG 158 (196)
Q Consensus 138 ~~H~F~~~~-~~~~~alRlF~~ 158 (196)
-.|.....+ +....++.++..
T Consensus 277 WwH~V~~l~d~~~sisvn~w~~ 298 (349)
T 3d8c_A 277 WWHHIESLLNGGITITVNFWYK 298 (349)
T ss_dssp CEEEEEECTTSCCEEEEEEEEE
T ss_pred CcEEEEEcCCCCcEEEEEEEcC
Confidence 999988665 345677877654
No 142
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=90.54 E-value=0.95 Score=38.45 Aligned_cols=63 Identities=14% Similarity=0.286 Sum_probs=45.2
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC--Ceeeee-ecCCCcEEEEEEecC
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRFT-LDTDNYIKAMRLFVG 158 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG--~~H~F~-~~~~~~~~alRlF~~ 158 (196)
|..|.|.. |.|.|+++|++.+. |.-+. .-.+++||+-..-|| +.|-=. ..++..+..+.|...
T Consensus 77 f~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~ 143 (256)
T 2vec_A 77 FQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD 143 (256)
T ss_dssp EEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEE
T ss_pred cCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEe
Confidence 68999998 55899999997654 33233 367999999999665 789743 334456777777644
No 143
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=90.49 E-value=0.27 Score=42.56 Aligned_cols=50 Identities=20% Similarity=0.304 Sum_probs=36.2
Q ss_pred ccccccCcc---------eEEEE-Ee---ceEEEEEE---eCCCeEEEEEEecCCEEEeCCCCeeeeee
Q 029255 92 FEEHLHTDE---------EIRYC-VA---GSGYFDVR---DRNEKWIRIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 92 ~~eH~H~~d---------Eiryi-l~---G~g~f~v~---~~~d~~~~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
|+.|.|+.+ |++|+ +. |.|+-.+= +..|+ .+.++.||.++||.|- |--.+
T Consensus 168 yPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy-Hp~~a 233 (270)
T 2qjv_A 168 WPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY-HPVAT 233 (270)
T ss_dssp CSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB-CCEEE
T ss_pred CCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc-CCCcC
Confidence 899999975 99987 54 44444441 11233 4899999999999999 98544
No 144
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=90.47 E-value=0.38 Score=33.92 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=30.4
Q ss_pred eeeeEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCC
Q 029255 70 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE 119 (196)
Q Consensus 70 ~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~-dEiryil~G~g~f~v~~~~d 119 (196)
+.-.+.+.++. .+..|+|.. -||.||++|++++.+-+..+
T Consensus 37 s~~r~~l~~gg----------~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 37 LLNCLQMNEGA----------LFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EEEEEEECTTC----------EEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred ceEEEEEcCCc----------CcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 44556666664 488999997 69999999999999875443
No 145
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=89.60 E-value=2.9 Score=36.51 Aligned_cols=54 Identities=20% Similarity=0.413 Sum_probs=41.4
Q ss_pred ccccccCcceEEEEEeceEEEEEE-eCC---------------------------------CeEEEEEEecCCEEEeCCC
Q 029255 92 FEEHLHTDEEIRYCVAGSGYFDVR-DRN---------------------------------EKWIRIWVKKGGMIVLPAG 137 (196)
Q Consensus 92 ~~eH~H~~dEiryil~G~g~f~v~-~~~---------------------------------d~~~~i~~~~GDlI~VPaG 137 (196)
...|.-..+-+...+.|+=.+.+- ..+ ...+.+.+++||+|.||+|
T Consensus 154 ~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP~g 233 (342)
T 1vrb_A 154 FKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRG 233 (342)
T ss_dssp CCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEECTT
T ss_pred CCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeCCC
Confidence 456776667777778899888877 221 1135789999999999999
Q ss_pred Ceeeeeec
Q 029255 138 CYHRFTLD 145 (196)
Q Consensus 138 ~~H~F~~~ 145 (196)
..|.....
T Consensus 234 wwH~v~s~ 241 (342)
T 1vrb_A 234 LWHSTKSD 241 (342)
T ss_dssp CEEEEECS
T ss_pred ccEEEEEC
Confidence 99998875
No 146
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=88.27 E-value=3.5 Score=34.04 Aligned_cols=58 Identities=22% Similarity=0.286 Sum_probs=43.1
Q ss_pred cccccccC----cceEEEEEeceEEEEEEe--CC----CeEEEEEEec--CCEEEeCCCCeeeeeecCCC
Q 029255 91 FFEEHLHT----DEEIRYCVAGSGYFDVRD--RN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 91 f~~eH~H~----~dEiryil~G~g~f~v~~--~~----d~~~~i~~~~--GDlI~VPaG~~H~F~~~~~~ 148 (196)
.--.|.|. ...+..++.|+.+--+-| .+ ++|..+.+.+ +-.|.||+|.-|-|..-+++
T Consensus 56 lRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 56 LRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp EEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT
T ss_pred eEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC
Confidence 34577774 689999999998433332 22 5788888876 77899999999999876654
No 147
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=87.73 E-value=2.4 Score=35.58 Aligned_cols=62 Identities=21% Similarity=0.430 Sum_probs=44.1
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC--Ceee-eeecCCCcEEEEEEec
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHR-FTLDTDNYIKAMRLFV 157 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG--~~H~-F~~~~~~~~~alRlF~ 157 (196)
|..|.|.. +.|.|+++|+.... |.-+. .-.+++||+-..-|| +.|- +...++..+..+.|..
T Consensus 54 f~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv 119 (242)
T 1tq5_A 54 FGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWI 119 (242)
T ss_dssp EEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEE
T ss_pred CCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEE
Confidence 68999998 55999999986553 33233 357999999888555 8897 3334445677777764
No 148
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=87.51 E-value=4.8 Score=32.76 Aligned_cols=71 Identities=14% Similarity=0.011 Sum_probs=53.5
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeC-CC------eEEEEEEecCCEEEe-CCCCeeeeeecC-CCcEEEEEEecCC
Q 029255 90 NFFEEHLHTD-EEIRYCVAGSGYFDVRDR-NE------KWIRIWVKKGGMIVL-PAGCYHRFTLDT-DNYIKAMRLFVGD 159 (196)
Q Consensus 90 ~f~~eH~H~~-dEiryil~G~g~f~v~~~-~d------~~~~i~~~~GDlI~V-PaG~~H~F~~~~-~~~~~alRlF~~~ 159 (196)
+.-..|-|.. -.+.+||+|+..-.+=+. ++ ..-...+.+||...+ |++--|+..... +.....|.+|.++
T Consensus 81 q~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~pp 160 (200)
T 3eln_A 81 HGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPP 160 (200)
T ss_dssp CBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEESC
T ss_pred CcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCCC
Confidence 3468999995 799999999998765221 11 122578999999999 777799998654 5678999999887
Q ss_pred C
Q 029255 160 P 160 (196)
Q Consensus 160 ~ 160 (196)
-
T Consensus 161 ~ 161 (200)
T 3eln_A 161 F 161 (200)
T ss_dssp C
T ss_pred c
Confidence 4
No 149
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=87.49 E-value=2 Score=37.26 Aligned_cols=65 Identities=12% Similarity=0.184 Sum_probs=44.7
Q ss_pred ccccCcceEEEEEeceEEEEEEeCC------------------------------CeEEEEEEecCCEEEeCCCCeeeee
Q 029255 94 EHLHTDEEIRYCVAGSGYFDVRDRN------------------------------EKWIRIWVKKGGMIVLPAGCYHRFT 143 (196)
Q Consensus 94 eH~H~~dEiryil~G~g~f~v~~~~------------------------------d~~~~i~~~~GDlI~VPaG~~H~F~ 143 (196)
.|.-..+-+...+.|+=.+.+-... -..+.+.+++||+|.||+|-.|...
T Consensus 182 ~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v~ 261 (338)
T 3al5_A 182 THYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVI 261 (338)
T ss_dssp EECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTTCEEEEE
T ss_pred ceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCCCeEEEe
Confidence 3544445556668888877764221 1267899999999999999999988
Q ss_pred ecCCCcEEEEEE-ecCCC
Q 029255 144 LDTDNYIKAMRL-FVGDP 160 (196)
Q Consensus 144 ~~~~~~~~alRl-F~~~~ 160 (196)
..+. ..++.+ |...+
T Consensus 262 ~l~~--sisvn~~~~~~~ 277 (338)
T 3al5_A 262 SEEF--GVGVNIFWKHLP 277 (338)
T ss_dssp ESSC--EEEEEEEECSSC
T ss_pred eCCC--EEEEEEEecCCc
Confidence 6543 466664 54443
No 150
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=83.37 E-value=9.9 Score=31.28 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=53.4
Q ss_pred ccccccccCcceEEEEEeceEEEEE--EeCCCeEE----EEEEecCCEEEeCCC--Ceeeeeec-CCCcEEEEEEecCCC
Q 029255 90 NFFEEHLHTDEEIRYCVAGSGYFDV--RDRNEKWI----RIWVKKGGMIVLPAG--CYHRFTLD-TDNYIKAMRLFVGDP 160 (196)
Q Consensus 90 ~f~~eH~H~~dEiryil~G~g~f~v--~~~~d~~~----~i~~~~GDlI~VPaG--~~H~F~~~-~~~~~~alRlF~~~~ 160 (196)
+.-..|-|..--+..|++|+..-.+ ...++... ...+.+||.+.++++ --|+.... .+.....|.+|..+-
T Consensus 84 q~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~pl 163 (211)
T 3uss_A 84 QITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANI 163 (211)
T ss_dssp CBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSCG
T ss_pred CcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCCC
Confidence 4578999998899999999986654 21223211 267999999999988 68998743 455689999998875
No 151
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=82.74 E-value=0.56 Score=40.57 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=33.7
Q ss_pred ceEEEEEe-ceEEEEEEeC-----------CCe------EEEEEEecCCEEEeCCCCeeeeeec
Q 029255 100 EEIRYCVA-GSGYFDVRDR-----------NEK------WIRIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 100 dEiryil~-G~g~f~v~~~-----------~d~------~~~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
.|+.|+|+ .+++++++.. ++. --++.+++||.+.||||+.|-.-.+
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~G 181 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEGL 181 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEESE
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCCC
Confidence 68888887 5566665521 122 3478999999999999999987644
No 152
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=81.11 E-value=0.7 Score=40.23 Aligned_cols=22 Identities=32% Similarity=0.588 Sum_probs=19.9
Q ss_pred EEEEecCCEEEeCCCCeeeeee
Q 029255 123 RIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 123 ~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
++.+++||.+.||||+.|-.-.
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEECCTTCEEEECTTCCEEECS
T ss_pred EEEcCCCCEEEcCCCCceEecC
Confidence 6899999999999999998643
No 153
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=79.77 E-value=2.5 Score=37.15 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=23.7
Q ss_pred EEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 121 WIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 121 ~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
.+++.+++||+|.||+|-.|.....+.
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 367899999999999999999887665
No 154
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=79.41 E-value=10 Score=28.85 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=46.5
Q ss_pred hccccccccCc--ceEEEEEeceEEEEEEeCCCe---EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCc
Q 029255 89 KNFFEEHLHTD--EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 161 (196)
Q Consensus 89 ~~f~~eH~H~~--dEiryil~G~g~f~v~~~~d~---~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~g 161 (196)
+.|..-|.=.. =.-.=|++|+..|.+=..++. -..+.+.+|+.-+||+...|+..++.+-. --|.||..++.
T Consensus 26 ~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~-f~leFyc~~~d 102 (119)
T 3dl3_A 26 EALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQ-FNINFWSDQDK 102 (119)
T ss_dssp HHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCE-EEEEEEECC--
T ss_pred HHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeE-EEEEEEECchH
Confidence 44555552222 134568999999996322221 12468899999999999999999655533 34778877653
No 155
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=78.80 E-value=6.5 Score=28.83 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=36.7
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
..|+.=|++|++.+.+.+ .++| ....+|+-+.||+|..-.....+.
T Consensus 41 ~~E~M~vvsG~~~V~lpg-~~ew--~~~~aGesF~Vpans~F~l~v~~~ 86 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVG-EADW--TTYSSGESFDVEGNSSFELQVKDA 86 (94)
T ss_dssp SCEEEEEEESEEEEEETT-CSSC--EEEETTCEEEECSSEEEEEEESSC
T ss_pred CeEEEEEEEeEEEEEcCC-CCcC--EEECCCCEEEECCCCEEEEEEccc
Confidence 478999999999999963 3567 579999999999998766655443
No 156
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=78.26 E-value=3.1 Score=33.97 Aligned_cols=56 Identities=14% Similarity=0.296 Sum_probs=38.6
Q ss_pred hccccccccCcce---EEEEEe--ceEEEEEEeCC------------------CeEEEEEEecCCEEEeCCCCeeeeee
Q 029255 89 KNFFEEHLHTDEE---IRYCVA--GSGYFDVRDRN------------------EKWIRIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 89 ~~f~~eH~H~~dE---iryil~--G~g~f~v~~~~------------------d~~~~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
..|+..|.|..-- |+|+-- +.|.+.+.+.. ..+..|..++||||+-|+-+.|.-..
T Consensus 113 G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 113 GGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp TCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECC
T ss_pred CCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccC
Confidence 5789999998644 344432 23444444321 23447889999999999999999876
No 157
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=77.77 E-value=1.2 Score=39.93 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=20.6
Q ss_pred EEEEecCCEEEeCCCCeeeeeec
Q 029255 123 RIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 123 ~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
.|.+++||.|.||||+.|-.-.+
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCCC
Confidence 68999999999999999987654
No 158
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=76.79 E-value=7.8 Score=33.62 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=36.6
Q ss_pred ccccccCc--ceEEEEE---eceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCC
Q 029255 92 FEEHLHTD--EEIRYCV---AGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 148 (196)
Q Consensus 92 ~~eH~H~~--dEiryil---~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~ 148 (196)
++.|+|+. ||.+|+- .|.+.-.++ ..++-..+.|+.||.+++|..-.|-- .+.++
T Consensus 196 yPpHkHDrr~EeyyYF~l~~~gfv~q~~g-~p~Etrhi~V~n~daVlvP~wh~h~~-~G~~~ 255 (282)
T 1xru_A 196 MPCHTHERRMEVYFYFNMDDDACVFHMMG-QPQETRHIVMHNEQAVISPSWSIHSG-VGTKA 255 (282)
T ss_dssp CSEEECTTEEEEEEEESCCTTCCEEEEEE-ETTEEEEEEECSSEEEEECTTCEEEE-EESSC
T ss_pred CCCccCCCCceEEEEEEeCCCCEEEEEeC-CCCCeeEEEEECCCEEEeCCCCCCCC-CCccc
Confidence 89999985 7777764 244444444 34555567899999999996455553 35544
No 159
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=73.73 E-value=14 Score=31.96 Aligned_cols=37 Identities=30% Similarity=0.368 Sum_probs=29.8
Q ss_pred CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCe
Q 029255 98 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCY 139 (196)
Q Consensus 98 ~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~ 139 (196)
..-.+..+++|+|.... +++ .+.+++||-++|||++.
T Consensus 268 ~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCC
T ss_pred CccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCc
Confidence 34689999999998765 243 46899999999999874
No 160
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=73.46 E-value=6 Score=34.50 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=32.8
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeee-------eeecCCCcEEEEEEecCCCc
Q 029255 96 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR-------FTLDTDNYIKAMRLFVGDPV 161 (196)
Q Consensus 96 ~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~-------F~~~~~~~~~alRlF~~~~g 161 (196)
+|+.-|=-|+|+|.+ ..|++..-|+|+.|. --.+++..+..+|.=.+-..
T Consensus 235 iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~Se~G~l~fvR~DgdLs~ 291 (303)
T 2qdr_A 235 IQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHITDDGGLFFVRVDRDLSK 291 (303)
T ss_dssp EECSCEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEEESSCEEEEEEESSCTTS
T ss_pred eeccceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcCcCCceEEEEEeCcccce
Confidence 478766678898865 349999999999998 22334444444554333333
No 161
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=72.16 E-value=11 Score=27.26 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=27.1
Q ss_pred EEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCC
Q 029255 122 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 159 (196)
Q Consensus 122 ~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~ 159 (196)
++=.+++||+++||+|-.=-..++. + +..+-|.++.
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~-~-le~v~F~tna 41 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS-D-LNMVGIGVNA 41 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS-S-EEEEEEEESC
T ss_pred hhceecCCcEEEECCCCceeEEecC-C-eEEEEEEecC
Confidence 3457999999999999877777764 3 7777666665
No 162
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=71.13 E-value=2.8 Score=36.55 Aligned_cols=51 Identities=20% Similarity=0.269 Sum_probs=33.8
Q ss_pred ccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCee--eeeecCCCcEEEEEEe
Q 029255 94 EHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYH--RFTLDTDNYIKAMRLF 156 (196)
Q Consensus 94 eH~H~-~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H--~F~~~~~~~~~alRlF 156 (196)
+=.|. +-| +|||.|+..++ + -.|.+|.++.+|+|+.= |-.+++.+ +..| +|
T Consensus 106 ~Gi~~ad~E-~fVL~G~i~~G-----~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g-~~iL-~f 159 (303)
T 2qdr_A 106 SGIFTADLE-IFVIKGAIQLG-----E----WQLNKHSYSFIPAGVRIGSWKVLGGEE-AEIL-WM 159 (303)
T ss_dssp CBEESSCEE-EEEEESEEEET-----T----EEECTTEEEEECTTCCBCCEEEETTSC-EEEE-EE
T ss_pred CcccccceE-EEEEEeEEEeC-----C----EEecCCceEEecCCCccCceeecCCCC-cEEE-EE
Confidence 44454 445 99999986642 3 26999999999999854 33444443 4555 44
No 163
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=70.85 E-value=20 Score=30.37 Aligned_cols=62 Identities=21% Similarity=0.367 Sum_probs=43.0
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCC--CCeeeeeecCCCcEEEEEEec
Q 029255 92 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 92 ~~eH~H~~-dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPa--G~~H~F~~~~~~~~~alRlF~ 157 (196)
|..|-|.. |=|.|+++|+.... |.-+. .-.+++||+=..-| |+.|-=...++..+..+.|..
T Consensus 52 f~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 116 (277)
T 2p17_A 52 FDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWV 116 (277)
T ss_dssp CCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEE
T ss_pred CCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEe
Confidence 89999998 55899999996543 33343 35789999966655 577864433445577777765
No 164
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=70.28 E-value=5.8 Score=36.34 Aligned_cols=28 Identities=29% Similarity=0.460 Sum_probs=24.0
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+.+++.+++||.|.||+|-.|.....++
T Consensus 299 ~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 299 KCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred ceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 5679999999999999999998765544
No 165
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=70.14 E-value=5.2 Score=35.44 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=27.4
Q ss_pred EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceee
Q 029255 121 WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 164 (196)
Q Consensus 121 ~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~ 164 (196)
++++.=++||+|++++|++||.-... +-..+-.-..++-|..
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G--~~~n~awN~a~~~~~q 319 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATG--WCNNIAWNVGPLTAYQ 319 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEEESCTTGG
T ss_pred eEEEEECCCCEEEECCCceEEEEecc--eeeEEEEEeCCCcHHH
Confidence 45777889999999999999954322 2333444444454543
No 166
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=69.09 E-value=2.7 Score=38.39 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=20.4
Q ss_pred EEEEecCCEEEeCCCCeeeeeec
Q 029255 123 RIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 123 ~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
.|.++|||.|.||||+.|-.-.+
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred eEecCCCCEEecCCCCccccCCC
Confidence 58899999999999999987644
No 167
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=68.16 E-value=5 Score=36.03 Aligned_cols=29 Identities=28% Similarity=0.475 Sum_probs=24.0
Q ss_pred CeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 119 EKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 119 d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
++.+++.+++||.|.||+|-.|.....++
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nled 242 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTPVD 242 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecCCC
Confidence 35689999999999999999998765433
No 168
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=68.10 E-value=12 Score=32.65 Aligned_cols=49 Identities=12% Similarity=0.146 Sum_probs=25.1
Q ss_pred ccccccCc--ceEEEEE-e--ceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeee
Q 029255 92 FEEHLHTD--EEIRYCV-A--GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 141 (196)
Q Consensus 92 ~~eH~H~~--dEiryil-~--G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~ 141 (196)
++.|+|+. |+.+|+- . |.++-.++ .-++-.-+.|+.||.+++|.|-+|-
T Consensus 196 yPpHkHDrr~E~yyYF~l~p~~~v~h~~g-~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 196 MPCHTHERRMEAYVYFDMEEDTRIFHMMG-KPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp --------CEEEEEEESCCTTCCEEEEES-STTSCEEEEECTTEEEEECTTSCCC
T ss_pred CCCccCCCCCeeEEEEEeCCCCeEEEECC-CCCceEEEEEECCCEEEeCCCcccC
Confidence 88999985 4444442 1 33333333 2244445789999999999998995
No 169
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=67.85 E-value=15 Score=31.46 Aligned_cols=49 Identities=16% Similarity=0.199 Sum_probs=33.4
Q ss_pred eEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEec
Q 029255 101 EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 101 Eiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~ 157 (196)
.+..+++| |..... ++ .+.+++||.++|||++...--.++ .++.+|.|.
T Consensus 250 ~il~v~~G-~~i~~~---~~--~~~l~~G~~~~ipa~~~~~~i~g~--~~~~~~a~~ 298 (300)
T 1zx5_A 250 NILYAAEG-YFILRG---KE--TADLHRGYSCLVPASTDSFTVESE--RGKIVRIYL 298 (300)
T ss_dssp EEEEEEES-CEEEES---SS--EEEECTTCEEEECTTCCEEEEEEE--EEEEEEEEE
T ss_pred EEEEEccc-EEEEeC---Ce--EEEEccceEEEEeCCCceEEEEeC--ceEEEEEEE
Confidence 78899999 877652 33 357999999999999854221221 366666553
No 170
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=67.74 E-value=5 Score=36.26 Aligned_cols=28 Identities=25% Similarity=0.359 Sum_probs=23.5
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+++++.+++||.|.||+|-.|.....++
T Consensus 242 ~~~ev~l~pGEtlfIPsGWwH~V~nled 269 (392)
T 3pua_A 242 KCYKCIVKQGQTLFIPSGWIYATLTPVD 269 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCcEEeeCCCceEEEecCCC
Confidence 5689999999999999999998654433
No 171
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=66.75 E-value=11 Score=28.25 Aligned_cols=43 Identities=19% Similarity=0.303 Sum_probs=35.0
Q ss_pred ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeec
Q 029255 100 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 145 (196)
Q Consensus 100 dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~ 145 (196)
.|+.=|++|++.+.+.+ .+.| ....+|+-+.||++..-.....
T Consensus 55 ~E~MevvsG~l~V~LpG-~~eW--~~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 55 AETIRVLSGMAYYHAEG-ANDV--QELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp CEEEEEEEEEEEEECTT-CSSC--EEEETTCEEEECSSSCEEEEEE
T ss_pred cEEEEEEEeEEEEECCC-CccC--EEECCCCEEEECCCCcEEEEEC
Confidence 78999999999988863 3567 5799999999999987665543
No 172
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=66.55 E-value=18 Score=25.37 Aligned_cols=59 Identities=10% Similarity=-0.059 Sum_probs=36.7
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeC---CCCeeeeeecCCCcEEEEEEec
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~VP---aG~~H~F~~~~~~~~~alRlF~ 157 (196)
.+.+++|++|.......+.+++ ..--.+.+||++-.- .|.++.++.........+++-.
T Consensus 46 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~~ 108 (149)
T 2pqq_A 46 GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALGH 108 (149)
T ss_dssp ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEEG
T ss_pred CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEeH
Confidence 3679999999999887655444 444578899987432 2344444443333455555543
No 173
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=66.30 E-value=6.8 Score=35.91 Aligned_cols=28 Identities=36% Similarity=0.478 Sum_probs=23.8
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+.+++.+++||+|.||+|=.|.....++
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nled 291 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTPTD 291 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred cceEEEECCCcEEEeCCCceEEEecCCC
Confidence 4678999999999999999999765443
No 174
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=66.01 E-value=5.4 Score=37.47 Aligned_cols=29 Identities=28% Similarity=0.472 Sum_probs=23.7
Q ss_pred CeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 119 EKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 119 d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+.++++.+++||.|.||+|-.|...+.++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCC
Confidence 35678999999999999999998654433
No 175
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=65.30 E-value=16 Score=32.59 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=36.3
Q ss_pred cCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEec
Q 029255 97 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 97 H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~ 157 (196)
+....|..+++|+|..... ++ .+.+++||.++|||+..- ++... ..+.+|.|.
T Consensus 340 ~~~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~~ 392 (394)
T 2wfp_A 340 QHSAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADESP-VNASG--TGRLARVYN 392 (394)
T ss_dssp CSSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEEC
T ss_pred CCCcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEEe
Confidence 3446899999999986542 33 468999999999998633 22221 256666653
No 176
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=64.35 E-value=23 Score=26.64 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=36.8
Q ss_pred ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 100 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 100 dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
.|+.=|++|++...+.+ .++| ....+|+-..||++..-.....+.
T Consensus 58 ~E~MevvsG~l~V~Lpg-~~eW--~~~~aGesF~VpanssF~lkv~~~ 102 (111)
T 3hqx_A 58 PERMEIISGECRVKIAD-STES--ELFRAGQSFYVPGNSLFKIETDEV 102 (111)
T ss_dssp CEEEEEEESEEEEEETT-CSSC--EEEETTCEEEECTTCEEEEECSSC
T ss_pred cEEEEEEEeEEEEEcCC-cccC--EEeCCCCEEEECCCCcEEEEECcc
Confidence 78999999999999863 3567 578999999999999877766544
No 177
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=64.05 E-value=16 Score=29.41 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=39.0
Q ss_pred cccccccCcceEEEEEeceE-EEEEEeCCCeEEEEEEe----cCC---EEEeCCCCeeeeee
Q 029255 91 FFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIWVK----KGG---MIVLPAGCYHRFTL 144 (196)
Q Consensus 91 f~~eH~H~~dEiryil~G~g-~f~v~~~~d~~~~i~~~----~GD---lI~VPaG~~H~F~~ 144 (196)
+-.+|.-..+|+++...|.. .+.+-+.++....+.+. +|+ -++||+|+......
T Consensus 65 ~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 65 PDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp CEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred CccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 45677767799999999986 45555567776667665 467 58999998555444
No 178
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=63.78 E-value=26 Score=28.84 Aligned_cols=55 Identities=18% Similarity=0.155 Sum_probs=38.4
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEec----CC--EEEeCCCCeeeeeec
Q 029255 91 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK----GG--MIVLPAGCYHRFTLD 145 (196)
Q Consensus 91 f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~----GD--lI~VPaG~~H~F~~~ 145 (196)
+-.+|.-..||+.+...|++...+-..++....+.+.+ |. -++||+|+.......
T Consensus 92 ~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 92 IGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp EEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred cccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 34566667799999999977665554666655566654 44 389999987766543
No 179
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=62.27 E-value=7.2 Score=36.02 Aligned_cols=54 Identities=20% Similarity=0.264 Sum_probs=38.0
Q ss_pred ccccCcce--EEEEEeceEEEEEEeC-------------------------CCeEEEEEEecCCEEEeCCCCeeeeeecC
Q 029255 94 EHLHTDEE--IRYCVAGSGYFDVRDR-------------------------NEKWIRIWVKKGGMIVLPAGCYHRFTLDT 146 (196)
Q Consensus 94 eH~H~~dE--iryil~G~g~f~v~~~-------------------------~d~~~~i~~~~GDlI~VPaG~~H~F~~~~ 146 (196)
.|.....- ...++.|+=.|.+-.+ .++.+++.+++||+|.||+|-.|....-+
T Consensus 281 ~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~nle 360 (488)
T 3kv5_D 281 FHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQ 360 (488)
T ss_dssp EECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred eEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEeeCCC
Confidence 34444433 3467888888877522 13567999999999999999999876543
Q ss_pred C
Q 029255 147 D 147 (196)
Q Consensus 147 ~ 147 (196)
+
T Consensus 361 d 361 (488)
T 3kv5_D 361 D 361 (488)
T ss_dssp E
T ss_pred C
Confidence 3
No 180
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=61.98 E-value=37 Score=25.88 Aligned_cols=53 Identities=6% Similarity=0.006 Sum_probs=33.2
Q ss_pred cceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEe
Q 029255 99 DEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF 156 (196)
.+.+++|++|....... .++ +.+--.+.+||++-. ++.++.........+++=
T Consensus 45 ~~~~y~i~~G~v~~~~~-~~G~~~~~~~~~~G~~~G~----~~~~~~~A~~~~~v~~i~ 98 (220)
T 2fmy_A 45 RNLVFLVKSGRVRVYLA-YEDKEFTLAILEAGDIFCT----HTRAFIQAMEDTTILYTD 98 (220)
T ss_dssp SCEEEEEEESEEEEEEE-CSSCEEEEEEEETTCEEES----CSSSEEEESSSEEEEEEE
T ss_pred CCeEEEEEecEEEEEEC-CCCCEEEEEEcCCCCEeCC----ccceEEEEcCcEEEEEEe
Confidence 46799999999988543 444 344557899999876 233333223335666553
No 181
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=61.42 E-value=25 Score=30.03 Aligned_cols=62 Identities=23% Similarity=0.311 Sum_probs=42.8
Q ss_pred ccccccCcce-EEEEE-eceEEEEEEeCCCeEEEEEEecCCEEEeCC--CCeeeeeecCCCcEEEEEEec
Q 029255 92 FEEHLHTDEE-IRYCV-AGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKAMRLFV 157 (196)
Q Consensus 92 ~~eH~H~~dE-iryil-~G~g~f~v~~~~d~~~~i~~~~GDlI~VPa--G~~H~F~~~~~~~~~alRlF~ 157 (196)
|..|-|..-| |.|++ +|+.... |.-+. .-.+++||+-..=| |+.|-=....+..+..+.|..
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 118 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWV 118 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEE
T ss_pred CCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEe
Confidence 7999999855 89999 9996654 33333 35789999955555 577864333445577777765
No 182
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=60.96 E-value=8.1 Score=34.95 Aligned_cols=28 Identities=29% Similarity=0.466 Sum_probs=23.6
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecCC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDTD 147 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~~ 147 (196)
+.+++.+++||.+.||+|-.|....-++
T Consensus 243 ~~~~v~l~pGe~lfIPsGW~H~V~nled 270 (397)
T 3kv9_A 243 KCYKCVVKQGHTLFVPTGWIHAVLTSQD 270 (397)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCCEEEeCCCCeEEccCCcC
Confidence 5679999999999999999998765433
No 183
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=59.48 E-value=10 Score=35.63 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=28.2
Q ss_pred EEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeec
Q 029255 122 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPF 165 (196)
Q Consensus 122 ~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~ 165 (196)
+++.=++||+|++++|++||.-... +-..+-.-..++-|.++
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G--~~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIG--WCNNIAWNVGPLTACQY 379 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEECCSSHHHH
T ss_pred EEEEECCCCEEEECCCceEEEEecc--eeeeeEEEeccCchHHH
Confidence 4567789999999999999954322 23444444455566664
No 184
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=59.20 E-value=23 Score=26.47 Aligned_cols=58 Identities=7% Similarity=-0.055 Sum_probs=37.8
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE-eC---CCCeeeeeecCCCcEEEEEEe
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV-LP---AGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~-VP---aG~~H~F~~~~~~~~~alRlF 156 (196)
.+.+++|++|.......+.+|+ .+--.+.+||++- +. .+.++.++........++++-
T Consensus 48 ~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i~ 110 (194)
T 3dn7_A 48 CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSIT 110 (194)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEEE
T ss_pred eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEEe
Confidence 3789999999999887655554 4445689999985 32 244454444443445666553
No 185
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=59.06 E-value=27 Score=31.74 Aligned_cols=57 Identities=19% Similarity=0.334 Sum_probs=37.5
Q ss_pred CcceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCeeeeeecC---CCcEEEEEEec
Q 029255 98 TDEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDT---DNYIKAMRLFV 157 (196)
Q Consensus 98 ~~dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~VPaG~~H~F~~~~---~~~~~alRlF~ 157 (196)
....|.++++|+|..... ++ .. .+.+++||.++||++..=.++... ...+++.|-|.
T Consensus 378 ~~~~illv~~G~g~i~~~--~~~~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~ 438 (440)
T 1pmi_A 378 NGPSIVIATNGKGTIQIT--GDDST-KQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFV 438 (440)
T ss_dssp SSCEEEEEEESEEEEEET--TCGGG-CEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEEC
T ss_pred CCcEEEEEEeCeEEEEeC--Ccccc-eEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEe
Confidence 446799999999998763 22 10 047999999999999433344321 33466666554
No 186
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=58.89 E-value=18 Score=25.26 Aligned_cols=85 Identities=12% Similarity=0.065 Sum_probs=44.5
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe-EE---EEEEecCCE
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WI---RIWVKKGGM 131 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~-~~---~i~~~~GDl 131 (196)
...++.|... ..+..+.++. ..+.+.. ..+.+++|++|.......+.+++ .+ --.+.+||+
T Consensus 19 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~ 83 (142)
T 3mdp_A 19 DEQLKDIALI-----SEEKSFPTGS---------VIFKENS-KADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAI 83 (142)
T ss_dssp HHHHHHHHHT-----EEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEECC---------CEEEEECTTCE
T ss_pred HHHHHHHHHh-----hcEEecCCCC---------EEEeCCC-CCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCE
Confidence 5667777643 3555555553 1121111 24789999999998876544443 33 346899998
Q ss_pred EEeC---CCCeeeeeecCCCcEEEEEE
Q 029255 132 IVLP---AGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 132 I~VP---aG~~H~F~~~~~~~~~alRl 155 (196)
+-.. .+..+.++.........+++
T Consensus 84 fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 84 FGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp ECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred echHHHcCCCCceEEEEECCcEEEEEE
Confidence 7533 34444444333333455544
No 187
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=58.39 E-value=46 Score=23.99 Aligned_cols=34 Identities=9% Similarity=-0.111 Sum_probs=25.1
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.+++|++|....... .+++ .+--.+.+||++-
T Consensus 79 ~~~~y~i~~G~v~~~~~-~~g~~~~~~~~~~G~~fG 113 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYVK-CDGVGRCVGNYDNRGSFG 113 (161)
T ss_dssp CCEEEEEEESEEEEEEE-ETTEEEEEEEEESCCEEC
T ss_pred CcEEEEEEeCEEEEEEc-CCCCeEEEEEcCCCCEec
Confidence 47899999999988874 4554 3344688999764
No 188
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=58.36 E-value=6.3 Score=36.90 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=19.9
Q ss_pred EEEEEEecCCEEEeCCCCeeeeee
Q 029255 121 WIRIWVKKGGMIVLPAGCYHRFTL 144 (196)
Q Consensus 121 ~~~i~~~~GDlI~VPaG~~H~F~~ 144 (196)
++++.=++||+|++++|++||.-.
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs 335 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQA 335 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEe
Confidence 346677899999999999999654
No 189
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=57.70 E-value=44 Score=25.51 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=25.2
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.+++|++|....... .+++ .+--.+.+||++-
T Consensus 41 ~~~~y~i~~G~v~~~~~-~~G~~~~~~~~~~G~~fG 75 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVYLV-GEEREISLFYLTSGDMFC 75 (222)
T ss_dssp CCCEEEEEESEEEEEEE-ETTEEEEEEEEETTCEEE
T ss_pred CCeEEEEEecEEEEEEC-CCCCEEEEEEcCCCCEec
Confidence 36799999999987643 4444 4445788999987
No 190
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=55.29 E-value=44 Score=25.22 Aligned_cols=85 Identities=8% Similarity=-0.009 Sum_probs=49.2
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEe
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 134 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~V 134 (196)
.+.++.|... ..+.++.++. ..+.+. -..+.+++|++|.......+.+++ .+--.+.+||++.+
T Consensus 16 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~ 80 (220)
T 3dv8_A 16 TAQKKLISDN-----LITQHVKKGT---------IIHNGN-MDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLL 80 (220)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEEEGG-GCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESG
T ss_pred HHHHHHHHhh-----CceEEeCCCC---------EEECCC-CCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeeh
Confidence 5667777632 2456666653 112221 124789999999999887666554 44456789999632
Q ss_pred -----CCCCeeeeeecCCCcEEEEEE
Q 029255 135 -----PAGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 135 -----PaG~~H~F~~~~~~~~~alRl 155 (196)
-.+.++.++.........+++
T Consensus 81 g~~~~~~~~~~~~~~~a~~~~~~~~i 106 (220)
T 3dv8_A 81 SASCIMRSIQFEVTIEAEKDTDLWII 106 (220)
T ss_dssp GGGGGCTTCCCCCEEEESSCEEEEEE
T ss_pred hHHHHhCCCCCceEEEEeeeeEEEEE
Confidence 234444444433334556655
No 191
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=54.20 E-value=37 Score=25.46 Aligned_cols=58 Identities=12% Similarity=-0.090 Sum_probs=36.2
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEe--CCCCeeeeeecCCCcEEEEEEe
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL--PAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~V--PaG~~H~F~~~~~~~~~alRlF 156 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-. =.+.++.++........++++=
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i~ 77 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLE 77 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEEC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEEc
Confidence 3679999999998877655544 44457889999843 1233444444333345665553
No 192
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=53.48 E-value=13 Score=30.34 Aligned_cols=40 Identities=13% Similarity=0.217 Sum_probs=32.6
Q ss_pred EEEEeceEEEEEEeC--CCeEEEEEEecCCEEEeCCCCeeee
Q 029255 103 RYCVAGSGYFDVRDR--NEKWIRIWVKKGGMIVLPAGCYHRF 142 (196)
Q Consensus 103 ryil~G~g~f~v~~~--~d~~~~i~~~~GDlI~VPaG~~H~F 142 (196)
.+=+.+++.|.++.. ++..+.+.++.||+++.+.+.++|+
T Consensus 135 svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~ 176 (211)
T 3i3q_A 135 SVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFY 176 (211)
T ss_dssp EEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCC
T ss_pred EEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceE
Confidence 455778999999853 3557789999999999999888765
No 193
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=52.88 E-value=45 Score=26.04 Aligned_cols=27 Identities=15% Similarity=0.257 Sum_probs=17.1
Q ss_pred EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCC
Q 029255 103 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA 136 (196)
Q Consensus 103 ryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPa 136 (196)
+|+.+|...-.+. .+ .+++||.|.+|.
T Consensus 95 ~~v~~~g~~~~~~-A~------eLk~GD~v~v~~ 121 (185)
T 2lcj_A 95 VLVYENGRFIEKR-AF------EVKEGDKVLVSE 121 (185)
T ss_dssp EEEEETTEEEEEE-GG------GCCTTCEEEECC
T ss_pred EEEecCCeEEEEE-HH------HCCCCCEEEEcc
Confidence 5555554433443 21 378899999997
No 194
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=51.66 E-value=35 Score=25.53 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=27.1
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEe
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 134 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~V 134 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-.
T Consensus 31 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 67 (207)
T 2oz6_A 31 CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGE 67 (207)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCccc
Confidence 3679999999998887655444 44557889999743
No 195
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=51.44 E-value=40 Score=25.42 Aligned_cols=35 Identities=14% Similarity=0.001 Sum_probs=26.9
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 80 ~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fG 115 (187)
T 3gyd_A 80 GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIG 115 (187)
T ss_dssp CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeee
Confidence 4789999999998888766664 3444789999863
No 196
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=50.71 E-value=17 Score=32.90 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=28.2
Q ss_pred EEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCC
Q 029255 122 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 160 (196)
Q Consensus 122 ~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~ 160 (196)
+.+.-.+||.|.||||-+|-...-.+---+++.|++.+.
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 368889999999999999998755542234556665543
No 197
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=50.20 E-value=18 Score=32.49 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=26.9
Q ss_pred EEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeecCCCCCCchh
Q 029255 121 WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPA 174 (196)
Q Consensus 121 ~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~~r~~d~~~~ 174 (196)
+.++.-++||+|++=+|.+|+--...-+...|+- -..+-|.++.+.+..-.+
T Consensus 304 v~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvN--FA~~~Wl~~g~~a~~C~C 355 (373)
T 3opt_A 304 CNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVN--FALEEWLPIGKKAGKCHC 355 (373)
T ss_dssp CEEEEECTTCEEEECTTCCEEEEESSSEEEEEEE--ECCC--------------
T ss_pred eEEEEECCCCEEEECCCceEEEEecCccHHHHHc--cCcHHHHHhhccCccCcc
Confidence 5588899999999999999995443333344443 345779988776543333
No 198
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=49.62 E-value=40 Score=25.25 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=35.8
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeCC---CC-eeeeeecCCCcEEEEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPA---GC-YHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~VPa---G~-~H~F~~~~~~~~~alRl 155 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-..+ +. ++.++.........+++
T Consensus 37 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 98 (210)
T 3ryp_A 37 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 98 (210)
T ss_dssp CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEE
Confidence 4789999999999887755554 4445689999985332 11 33343333333555655
No 199
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=47.62 E-value=38 Score=25.53 Aligned_cols=57 Identities=5% Similarity=-0.076 Sum_probs=36.0
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeC---CCCeeeeeecCCCcEEEEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~VP---aG~~H~F~~~~~~~~~alRl 155 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-.. .|.++.++.........+++
T Consensus 40 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 100 (216)
T 4ev0_A 40 GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLAL 100 (216)
T ss_dssp CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEE
T ss_pred CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEE
Confidence 4789999999999887755554 445578999987431 23334444333333555555
No 200
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=47.11 E-value=40 Score=25.95 Aligned_cols=63 Identities=6% Similarity=0.041 Sum_probs=39.5
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.++.|... ..+.++.++. ..+.+- -..+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 87 (237)
T 3fx3_A 24 EQHVDALLSQ-----AVWRSYDRGE---------TLFLQE-EKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFG 87 (237)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEECTT-SCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEEC
T ss_pred HHHHHHHHhh-----CEEEEECCCC---------EEEcCC-CccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEec
Confidence 5667777633 3456666553 111111 124689999999999888655554 4445789999873
No 201
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=46.99 E-value=40 Score=26.21 Aligned_cols=37 Identities=14% Similarity=0.217 Sum_probs=25.5
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeC
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLP 135 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VP 135 (196)
.+.+++|++|.......+.+++...+..-+||++-..
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~ 72 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMS 72 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEES
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecch
Confidence 3679999999998877656555332322389998554
No 202
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=45.44 E-value=42 Score=25.55 Aligned_cols=63 Identities=8% Similarity=0.151 Sum_probs=39.9
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.++.|... ..+.++.++. ..+.+-. ..+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 24 AGTIERFLAH-----SHRRRYPTRT---------DVFRPGD-PAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp HHHHHHHHTT-----SEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred HHHHHHHHHh-----CeEEEeCCCC---------EEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 5677777642 2455566553 1111111 24789999999999887655544 4445689999974
No 203
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=45.07 E-value=44 Score=25.51 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=35.9
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeC---CCCeeeeeecCCCcEEEEEEe
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~VP---aG~~H~F~~~~~~~~~alRlF 156 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-.. .|.++.++.........+++-
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~ 108 (227)
T 3d0s_A 47 GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMD 108 (227)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEEe
Confidence 4679999999998887755554 444578899987321 233444443333335666553
No 204
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=44.12 E-value=49 Score=26.26 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=36.1
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeCC---CC-eeeeeecCCCcEEEEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPA---GC-YHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~VPa---G~-~H~F~~~~~~~~~alRl 155 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-..+ +. .+.++........++++
T Consensus 87 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i 148 (260)
T 3kcc_A 87 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 148 (260)
T ss_dssp CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEE
Confidence 4789999999999887755554 4455789999985332 12 33343333333566655
No 205
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=42.98 E-value=5.1 Score=29.63 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=22.5
Q ss_pred EEEEec--eEEEEEEeCCCeEEEEEEecCCEEEeC
Q 029255 103 RYCVAG--SGYFDVRDRNEKWIRIWVKKGGMIVLP 135 (196)
Q Consensus 103 ryil~G--~g~f~v~~~~d~~~~i~~~~GDlI~VP 135 (196)
.|++.| ||..++.+.- ...+++||+|+|=
T Consensus 32 TYvI~GerSG~I~lNGAA----Arl~~~GD~vII~ 62 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAA----ARKVAIGDVVIIL 62 (97)
T ss_dssp EECEEECSTTCEEEEGGG----GGGCCTTCEEEEE
T ss_pred EEEEeeccCCeEEEchHH----HccCCCCCEEEEE
Confidence 688888 6889998543 2478999999874
No 206
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=42.95 E-value=40 Score=26.57 Aligned_cols=71 Identities=15% Similarity=0.168 Sum_probs=44.7
Q ss_pred hcCCCeeeeEEECCCCCCChHHHhhcccccccc-CcceEEEEEeceEE-EEEEeCCCeEEEEEEe----cCCE--EEeCC
Q 029255 65 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLH-TDEEIRYCVAGSGY-FDVRDRNEKWIRIWVK----KGGM--IVLPA 136 (196)
Q Consensus 65 ~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H-~~dEiryil~G~g~-f~v~~~~d~~~~i~~~----~GDl--I~VPa 136 (196)
.|...+.=-+-|.++ .+-.+|.- ..||+.+...|... ..+-..++....+.+. +|.. ++||+
T Consensus 36 ~R~~~TaIYfLL~~g----------~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~ 105 (154)
T 1znp_A 36 ERGHSTAIYYLLEKG----------VRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPA 105 (154)
T ss_dssp TTCSCEEEEEEEESS----------CCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECT
T ss_pred CCcceeEEEEEecCC----------CCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcC
Confidence 455555444445433 34678886 77999999999843 4344344554455554 3543 89999
Q ss_pred CCeeeeeec
Q 029255 137 GCYHRFTLD 145 (196)
Q Consensus 137 G~~H~F~~~ 145 (196)
|+-......
T Consensus 106 G~WqaA~~~ 114 (154)
T 1znp_A 106 NCWQSAESL 114 (154)
T ss_dssp TCEEEEEES
T ss_pred CEEEEeeEC
Confidence 987766543
No 207
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=41.89 E-value=50 Score=25.17 Aligned_cols=57 Identities=12% Similarity=-0.018 Sum_probs=34.8
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeCC---C-CeeeeeecCCCcEEEEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPA---G-CYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~VPa---G-~~H~F~~~~~~~~~alRl 155 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-.-+ + ..+.++........++++
T Consensus 40 ~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i 101 (213)
T 1o5l_A 40 IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSI 101 (213)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEE
Confidence 3678999999998877655554 4445688999873221 2 234444333333555555
No 208
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=41.60 E-value=22 Score=31.25 Aligned_cols=39 Identities=5% Similarity=0.127 Sum_probs=32.6
Q ss_pred EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeee
Q 029255 103 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 141 (196)
Q Consensus 103 ryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~ 141 (196)
.+=|-++..|.++..++..+++.+++|||++.+...++.
T Consensus 227 slSLG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~ 265 (345)
T 3tht_A 227 SLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYL 265 (345)
T ss_dssp EEEESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHT
T ss_pred EEECCCceeEEEccCCCceEEEEcCCCcEEEEChHHhhc
Confidence 344778999999976677889999999999999988753
No 209
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=40.94 E-value=42 Score=25.22 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=35.6
Q ss_pred ceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeC--CCCeeeeeecCCCcEEEEEE
Q 029255 100 EEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP--AGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 100 dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~VP--aG~~H~F~~~~~~~~~alRl 155 (196)
+.+++|++|.......+.+++ .+--.+.+||++-.+ .|..+.++.........+++
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 678999999998877655544 444568899987541 13334444333334666666
No 210
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=40.07 E-value=47 Score=27.21 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=27.0
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 132 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI 132 (196)
.+.+++|++|.......+.+++.+--.+.+||++
T Consensus 54 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 54 AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 4779999999999887766655455678999987
No 211
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=40.01 E-value=20 Score=25.32 Aligned_cols=35 Identities=9% Similarity=0.009 Sum_probs=23.7
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 53 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 88 (154)
T 2z69_A 53 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 88 (154)
T ss_dssp CCEEEEEEESCEEEECCCC-----CCEEECTTEEES
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeec
Confidence 4779999999998876544333 3345788999873
No 212
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=39.92 E-value=75 Score=24.21 Aligned_cols=63 Identities=10% Similarity=0.129 Sum_probs=38.9
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
...++.|... ..+.++.++.. .+.+- -..+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 19 ~~~~~~l~~~-----~~~~~~~~g~~---------i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 19 EDAMREALKV-----VTERNFQPDEL---------VVEQD-AEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp HHHHHHHHHT-----EEEEEECTTCB---------CCCTT-CTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred HHHHHHHHHh-----cEEEEECCCCE---------EEeCC-CCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 5667777643 35666666531 11111 124789999999998877655544 4455789999974
No 213
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=39.24 E-value=44 Score=25.83 Aligned_cols=88 Identities=6% Similarity=0.029 Sum_probs=48.2
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEe
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVL 134 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~V 134 (196)
.+.++.|....+ ..+.++.++. ..+.+- -..+.+++|++|.......+.++ +.+--.+.+||++-.
T Consensus 31 ~~~~~~l~~~~~---~~~~~~~~ge---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~ 97 (232)
T 1zyb_A 31 HEDFTSILDKVK---LHFIKHKAGE---------TIIKSG-NPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEP 97 (232)
T ss_dssp HHHHHHHHHTSC---CEEEEECTTC---------EEECTT-SBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECG
T ss_pred HHHHHHHHhhCC---cEEEEECCCC---------EEECCC-CcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeee
Confidence 677888875411 2445555443 111111 12478999999999887654443 344457789998743
Q ss_pred C---CCCe-eeeeecCCCcEEEEEEe
Q 029255 135 P---AGCY-HRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 135 P---aG~~-H~F~~~~~~~~~alRlF 156 (196)
- .+.. +.++.........+++-
T Consensus 98 ~~~~~~~~~~~~~~~A~~~~~v~~i~ 123 (232)
T 1zyb_A 98 QSLFGMNTNYASSYVAHTEVHTVCIS 123 (232)
T ss_dssp GGGSSSCCBCSSEEEESSCEEEEEEE
T ss_pred hHHhCCCCCCceEEEEccceEEEEEE
Confidence 2 2332 33333333335666553
No 214
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=38.66 E-value=60 Score=25.33 Aligned_cols=35 Identities=6% Similarity=0.082 Sum_probs=26.7
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 61 ~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 61 AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 4789999999998887656554 4455689999873
No 215
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=38.01 E-value=15 Score=24.23 Aligned_cols=37 Identities=11% Similarity=0.032 Sum_probs=20.7
Q ss_pred EEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeecC
Q 029255 123 RIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 166 (196)
Q Consensus 123 ~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~~ 166 (196)
.+.+++||+|.|= ....+....+...-.+..||+|-|
T Consensus 22 ELs~~~Gd~i~v~-------~~~~~gWw~g~~~~~g~~G~~P~n 58 (65)
T 2lj0_A 22 ELELRDGDIVDVM-------EKCDDGWFVGTSRRTKQFGTFPGN 58 (65)
T ss_dssp BCCBCTTCEEEEE-------EECTTSEEEEEETTTCCEEEEETT
T ss_pred CcCCCCCCEEEEe-------EeCCCCEEEEEECCCCCEEEEehh
Confidence 3778888888762 112233333333334567888754
No 216
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=37.27 E-value=42 Score=27.71 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=34.5
Q ss_pred CeEEEEEEecCCEEEeCCCCeeeeeec---CCCcEEEEEEecCCCceee
Q 029255 119 EKWIRIWVKKGGMIVLPAGCYHRFTLD---TDNYIKAMRLFVGDPVWTP 164 (196)
Q Consensus 119 d~~~~i~~~~GDlI~VPaG~~H~F~~~---~~~~~~alRlF~~~~gW~~ 164 (196)
..++.+.+++||+++.=..+.|+-... .......+++......|.+
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~~~~y~~ 261 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYID 261 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEETTCEECC
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECCCceEcc
Confidence 456789999999999999999997643 2344677777777655554
No 217
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=36.82 E-value=63 Score=25.16 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=26.5
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~-~~~i~~~~GDlI~ 133 (196)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 3679999999998887655554 3445688999974
No 218
>2lok_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Halobacterium SP} PDB: 4dlh_A
Probab=36.43 E-value=1.1e+02 Score=24.92 Aligned_cols=80 Identities=13% Similarity=0.178 Sum_probs=51.6
Q ss_pred CCCCcCCHhHHhhc-CeEEEEeCCCCccChHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEE
Q 029255 28 DPKEFVSLDQLSEL-GVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCV 106 (196)
Q Consensus 28 ~p~~~v~~~~L~~~-GV~~~~~~~~~~~~~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil 106 (196)
+|..+++.++++.. |+.|+..++. |...=.++..++ | +.+-.... ..-+..|.+
T Consensus 33 ~p~sPl~~~~r~~F~Gl~~fp~Dp~----------------wrv~a~~~p~~~--~------~~~~v~t~-~g~~~~~~~ 87 (197)
T 2lok_A 33 HDQSPIPPADRGAFDGLRYFDIDAS----------------FRVAARYQPARD--P------EAVELETT-RGPPAEYTR 87 (197)
T ss_dssp CTTSCCCHHHHHTCCCCCCCCCCST----------------TEEEEEEEECSS--C------CEEEEBCS-SSSCEEEEE
T ss_pred CccCCCChhHHhcCCCCccCCCCCC----------------EEEEEEEEECCC--C------cEEEEEec-CCceEEEEE
Confidence 45667777888875 9999877752 333333333333 1 23344444 567889999
Q ss_pred eceEEEEEEeCCCeEEEEEE---ecCCEEEeC
Q 029255 107 AGSGYFDVRDRNEKWIRIWV---KKGGMIVLP 135 (196)
Q Consensus 107 ~G~g~f~v~~~~d~~~~i~~---~~GDlI~VP 135 (196)
-|...|.+. |+.+++.+ +.|+-|.||
T Consensus 88 ~G~v~F~l~---G~~~~L~~~~~~~~~~Lflp 116 (197)
T 2lok_A 88 AAVLGFDLG---DSHHTLTAFRVEGESSLFVP 116 (197)
T ss_dssp EEEEEEEET---TEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEC---CEEEEEEEEecCCCCeEEEE
Confidence 999999985 56566666 456666665
No 219
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=35.87 E-value=53 Score=24.67 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=23.6
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 132 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI 132 (196)
.+.++||++|+..... .+++ +--.+.+||++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 3679999999988776 3455 34578999986
No 220
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=35.53 E-value=41 Score=27.56 Aligned_cols=38 Identities=11% Similarity=0.333 Sum_probs=30.7
Q ss_pred EEEEeceEEEEEEeCC----------CeEEEEEEecCCEEEeCCCCee
Q 029255 103 RYCVAGSGYFDVRDRN----------EKWIRIWVKKGGMIVLPAGCYH 140 (196)
Q Consensus 103 ryil~G~g~f~v~~~~----------d~~~~i~~~~GDlI~VPaG~~H 140 (196)
.+=|.+.+.|.++... +..++|.++.|||++....++.
T Consensus 158 slSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~ 205 (238)
T 2iuw_A 158 SLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQA 205 (238)
T ss_dssp EEEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHH
T ss_pred EEECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhC
Confidence 3446789999998653 3578999999999999999864
No 221
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=35.01 E-value=1.4e+02 Score=24.99 Aligned_cols=69 Identities=19% Similarity=0.220 Sum_probs=43.4
Q ss_pred cCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceE-EEEEEeCCC-------------------------
Q 029255 66 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSG-YFDVRDRNE------------------------- 119 (196)
Q Consensus 66 rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g-~f~v~~~~d------------------------- 119 (196)
|...+.=-+-|.++. +-.+|.-..+|+++...|+. .+.+-+.++
T Consensus 57 R~~~TaIYfLL~~g~----------~S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~ 126 (225)
T 3m3i_A 57 RHAYTTIYFLCTPES----------PSHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARP 126 (225)
T ss_dssp EESCEEEEEEECSSS----------CEEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CC
T ss_pred cccceeEEEEecCCC----------CcccEEecCCEEEEEECCCCEEEEEEcCCCccccccccccccccccccccccccc
Confidence 444554455555543 35567667799999999996 344443455
Q ss_pred ---eEEEEEEe----cCCE--EEeCCCCeeeeee
Q 029255 120 ---KWIRIWVK----KGGM--IVLPAGCYHRFTL 144 (196)
Q Consensus 120 ---~~~~i~~~----~GDl--I~VPaG~~H~F~~ 144 (196)
....+.+. +|.. .+||+|+.-....
T Consensus 127 ~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~ 160 (225)
T 3m3i_A 127 KYQVYRRVLVGARVERGELLQYTVPGGAIFGSSV 160 (225)
T ss_dssp SSCEEEEEEESSCGGGTCBSEEEECTTCEEEEEC
T ss_pred ccCceEEEEeCCCccCCceeEEEeCCCEEEEEEE
Confidence 44456664 4663 7999998555443
No 222
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=34.96 E-value=81 Score=22.47 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=23.5
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~ 133 (196)
.+.+++|++|...... +++.+ -.+.+||++-
T Consensus 79 ~~~~y~i~~G~v~~~~---~~~~~-~~~~~G~~fG 109 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYV---NNEWA-TSVGEGGSFG 109 (154)
T ss_dssp CCEEEEEEESCEEEEE---TTEEE-EEECTTCEEC
T ss_pred CCeEEEEEecEEEEEE---CCEEE-EEecCCCEee
Confidence 4789999999988776 35544 4689999863
No 223
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=32.82 E-value=48 Score=25.36 Aligned_cols=85 Identities=15% Similarity=0.053 Sum_probs=44.9
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEe
Q 029255 56 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVL 134 (196)
Q Consensus 56 ~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d-~~~~i~~~~GDlI~V 134 (196)
.+.++.|... ..+.++.++. ..+.+.. ..+.+++|++|.......+.++ +.+--.+.+||++-.
T Consensus 23 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~ 87 (232)
T 2gau_A 23 EEERELLDKE-----IQPFPCKKAS---------TVFSEGD-IPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGM 87 (232)
T ss_dssp HHHHHHHHHH-----CEEEEECTTC---------EEECTTC-CCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESH
T ss_pred HHHHHHHHhh-----CeEEEECCCC---------EEEeCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeee
Confidence 5667777652 3555555553 1121111 2467999999999877654433 344457899998732
Q ss_pred C---CCCeeeeeecCCCcEEEEEE
Q 029255 135 P---AGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 135 P---aG~~H~F~~~~~~~~~alRl 155 (196)
. .|..+.++.........+++
T Consensus 88 ~~~~~~~~~~~~~~A~~~~~v~~i 111 (232)
T 2gau_A 88 RPYFAEETCSSTAIAVENSKVLAI 111 (232)
T ss_dssp HHHHHTSCCSSEEEESSCEEEEEE
T ss_pred ehhhCCCCcceEEEEecceEEEEE
Confidence 2 13334444333333566655
No 224
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=32.51 E-value=1.6e+02 Score=25.03 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=44.1
Q ss_pred hcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEec--------CCEEEeCC
Q 029255 65 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK--------GGMIVLPA 136 (196)
Q Consensus 65 ~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~g~f~v~~~~d~~~~i~~~~--------GDlI~VPa 136 (196)
.-.|..-+++.|.++.. +...+-..|=..+.|.|.+.+.+. ++.+...... .|.+.||.
T Consensus 25 ~~~y~~f~~~~L~~Ge~----------~~~~~~~~E~~iv~l~G~~~V~~~---g~~~~~~g~R~svF~~~~p~~lYvp~ 91 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGES----------ITLPSDERERCLVLVAGLASVXAA---DSFFYRIGQRMSPFERIPAYSVYLPH 91 (270)
T ss_dssp TSSSCEEEEEEECTTCE----------EEECCSSEEEEEEEEESCEEEEET---TEEEEEECCCSSGGGCSCCCEEEECS
T ss_pred CcEEeEEEEEEecCCCE----------EEecCCCcEEEEEEecceEEEEEC---CEEEeccccccccccCCCCcEEEECC
Confidence 34566678888887641 222222234457778999988884 4433333333 59999999
Q ss_pred CCeeeeeecCC
Q 029255 137 GCYHRFTLDTD 147 (196)
Q Consensus 137 G~~H~F~~~~~ 147 (196)
|..=.|++...
T Consensus 92 g~~v~i~a~~~ 102 (270)
T 2qjv_A 92 HTEAXVTAETD 102 (270)
T ss_dssp SCCEEEEESSS
T ss_pred CCEEEEEecCC
Confidence 99666776553
No 225
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=32.32 E-value=43 Score=27.30 Aligned_cols=40 Identities=10% Similarity=0.259 Sum_probs=31.4
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeec---CCCcEEEEEEecCC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLD---TDNYIKAMRLFVGD 159 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~---~~~~~~alRlF~~~ 159 (196)
.++.+.+++||+++.=..+.|+-... .......+++....
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~ 268 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEAS 268 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEECT
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcCC
Confidence 46789999999999999999997432 33557788887764
No 226
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=31.45 E-value=1e+02 Score=24.39 Aligned_cols=34 Identities=12% Similarity=-0.064 Sum_probs=25.1
Q ss_pred ceEEEEEeceEEEEEEeCCC--eEEEEEEecCCEEE
Q 029255 100 EEIRYCVAGSGYFDVRDRNE--KWIRIWVKKGGMIV 133 (196)
Q Consensus 100 dEiryil~G~g~f~v~~~~d--~~~~i~~~~GDlI~ 133 (196)
+.+++|++|+........++ ....-.+.+||++=
T Consensus 199 ~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fG 234 (291)
T 2qcs_B 199 DEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFG 234 (291)
T ss_dssp CEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEEC
T ss_pred CEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEec
Confidence 67899999999887654433 24456789999873
No 227
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=31.24 E-value=57 Score=29.02 Aligned_cols=47 Identities=21% Similarity=0.289 Sum_probs=33.3
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeecCCC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRP 168 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~~r~ 168 (196)
.+.++.-++|++|++-+|.+|+--...-+...|+.| ..+.|.++.+.
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNF--A~~~Wl~~g~~ 306 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINF--ATPRWIDYGKM 306 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE--CCGGGHHHHHH
T ss_pred ceEEEEeCCCcEEEECCCceEEEeeccccHhHhhcc--CcHHHHHhhhh
Confidence 356888999999999999999954433334455543 45669887543
No 228
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=30.85 E-value=42 Score=27.28 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=31.2
Q ss_pred CeEEEEEEecCCEEEeCCCCeeeeeecCCC------cEEEEEEecCC
Q 029255 119 EKWIRIWVKKGGMIVLPAGCYHRFTLDTDN------YIKAMRLFVGD 159 (196)
Q Consensus 119 d~~~~i~~~~GDlI~VPaG~~H~F~~~~~~------~~~alRlF~~~ 159 (196)
..++.+.+++||+++.=..+.|+-....++ ....+|+....
T Consensus 208 ~~~v~~~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~~ 254 (288)
T 2rdq_A 208 EHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPAK 254 (288)
T ss_dssp SCEECCCCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEETT
T ss_pred CceeecccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecCc
Confidence 357789999999999999999997643332 36777777663
No 229
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=30.35 E-value=1e+02 Score=21.39 Aligned_cols=42 Identities=7% Similarity=0.020 Sum_probs=29.0
Q ss_pred HhHHhhcCeEEEEeCCCCccChHHHHHHHHh-cCCCeeeeEEECC
Q 029255 35 LDQLSELGVLSWRLDADNYETDEELKKIRED-RGYSYMDFCEVCP 78 (196)
Q Consensus 35 ~~~L~~~GV~~~~~~~~~~~~~~~i~~l~~~-rGy~~~Dvv~l~p 78 (196)
-+.|.+.||.|-.++.+. .....+.+.+. .|..+.=+|.+.-
T Consensus 21 K~~L~~~gi~y~~idi~~--d~~~~~~~~~~~~G~~tVP~I~i~D 63 (92)
T 2lqo_A 21 KTALTANRIAYDEVDIEH--NRAAAEFVGSVNGGNRTVPTVKFAD 63 (92)
T ss_dssp HHHHHHTTCCCEEEETTT--CHHHHHHHHHHSSSSSCSCEEEETT
T ss_pred HHHHHhcCCceEEEEcCC--CHHHHHHHHHHcCCCCEeCEEEEeC
Confidence 467899999997777653 23445555544 3888888888753
No 230
>2lnu_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Haloarcula marismortui}
Probab=30.01 E-value=1.3e+02 Score=24.43 Aligned_cols=80 Identities=16% Similarity=0.267 Sum_probs=49.0
Q ss_pred CCCCcCCHhHHhhc-CeEEEEeCCCCccChHHHHHHHHhcCCCeeeeEEECCCCCCChHHHhhccccccccCcceEEEEE
Q 029255 28 DPKEFVSLDQLSEL-GVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCV 106 (196)
Q Consensus 28 ~p~~~v~~~~L~~~-GV~~~~~~~~~~~~~~~i~~l~~~rGy~~~Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil 106 (196)
+|..+++.++++.. |+.|+..++. |...=.++..++ | +.+-.... ..-+..|.+
T Consensus 26 ~p~sPl~~~~r~~F~Gl~~fp~Dp~----------------wrv~a~~~~~~~--~------~~~~v~t~-~g~~~~~~~ 80 (190)
T 2lnu_A 26 HRQSPIPPEERDDFDGLSYFDPDPD----------------YRVEATVTVHET--P------ESVDLETS-DDRTVRYLH 80 (190)
T ss_dssp TSCCCSCTTHHHHCCSCCCCCCCGG----------------GEEEEEEEECSS--C------CEEEEECS-SSSEEEEEE
T ss_pred CccCCCChhHHhcCCCCccCCCCCC----------------EEEEEEEEECCC--C------cEEEEEec-CCceEEEEE
Confidence 35556667888775 9999877642 333333333333 1 23344444 568889999
Q ss_pred eceEEEEEEeCCCeEEEEEE-----ecCCEEEeC
Q 029255 107 AGSGYFDVRDRNEKWIRIWV-----KKGGMIVLP 135 (196)
Q Consensus 107 ~G~g~f~v~~~~d~~~~i~~-----~~GDlI~VP 135 (196)
-|...|.+. |+.+++.+ +.|+-|.||
T Consensus 81 ~G~~~F~l~---G~~~~L~~~~~~~~~~~~Lflp 111 (190)
T 2lnu_A 81 VATLSFDLD---GESRDLHAFRQAADESRTLFVP 111 (190)
T ss_dssp EEEEEEEET---TEEEEEEEEESSSCCSCCEEEE
T ss_pred eEEEEEEEC---CEEEEEEEEecccCCCCeEEEE
Confidence 999999985 56566666 345544444
No 231
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=29.87 E-value=1.1e+02 Score=21.54 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=24.6
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeC
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLP 135 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VP 135 (196)
.+.+++|++|...... ++. +--.+.+||++--.
T Consensus 68 ~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~fG~~ 100 (160)
T 4f8a_A 68 VDSLCFVVSGSLEVIQ---DDE-VVAILGKGDVFGDV 100 (160)
T ss_dssp CCEEEEEEESEEEEEE---TTE-EEEEEETTCEEECC
T ss_pred ccEEEEEEeeEEEEEE---CCE-EEEEecCCCEeCcH
Confidence 4789999999988765 244 34578999998643
No 232
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=28.18 E-value=1e+02 Score=24.59 Aligned_cols=56 Identities=11% Similarity=0.010 Sum_probs=33.9
Q ss_pred ceEEEEEeceEEEEEEe-CCC-eEEEEEEecCCEEEe---CCCCeeeeeecCCCcEEEEEE
Q 029255 100 EEIRYCVAGSGYFDVRD-RNE-KWIRIWVKKGGMIVL---PAGCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 100 dEiryil~G~g~f~v~~-~~d-~~~~i~~~~GDlI~V---PaG~~H~F~~~~~~~~~alRl 155 (196)
+.+++|++|+......+ .++ ...--.+.+||++-- =.|.++..+.........+.|
T Consensus 199 ~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i 259 (299)
T 3shr_A 199 DTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVI 259 (299)
T ss_dssp CEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEE
T ss_pred CEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEE
Confidence 67899999999888764 233 344457899998731 123344444333344555555
No 233
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=27.84 E-value=1.9e+02 Score=26.11 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=34.5
Q ss_pred EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeeee
Q 029255 103 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFT 143 (196)
Q Consensus 103 ryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F~ 143 (196)
+.|++|.....-...++- ....++++|-..|-+-+.|.|+
T Consensus 358 Y~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE
T ss_pred EEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc
Confidence 557899988888766544 7899999999999999999999
No 234
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=27.83 E-value=70 Score=28.68 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=31.9
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeec
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPF 165 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~ 165 (196)
.+.++.-++||+|++=+|.+|+--...-+...|+.| ..+-|.++
T Consensus 278 pv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNF--A~~~Wl~~ 321 (381)
T 2ox0_A 278 PFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNF--ATRRWIEY 321 (381)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEE--CCTTHHHH
T ss_pred ceEEEEecCCCEEEECCCcEEEeecCcccHHHHhcc--CcHHHHHH
Confidence 356888999999999999999954434445566655 44667665
No 235
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=27.50 E-value=1.1e+02 Score=21.11 Aligned_cols=52 Identities=8% Similarity=-0.033 Sum_probs=30.8
Q ss_pred ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeC---CCCeeeeee-cCCCcEEEEEE
Q 029255 100 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLP---AGCYHRFTL-DTDNYIKAMRL 155 (196)
Q Consensus 100 dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VP---aG~~H~F~~-~~~~~~~alRl 155 (196)
+.+++|++|...... .+++. ..+.+||++-.- .+..+.++. .......+++|
T Consensus 59 ~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 59 DSWYVILNGTVEISH--PDGKV--ENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp CEEEECCBSCEEEEC--SSSCE--EEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred CeEEEEEeCEEEEEc--CCCcE--EEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 678999999988664 34443 458899986322 233343343 33334555554
No 236
>2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens}
Probab=27.31 E-value=40 Score=25.82 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=23.1
Q ss_pred EEEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCC
Q 029255 123 RIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 160 (196)
Q Consensus 123 ~i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~ 160 (196)
+..+.+|.+++|| -.|..+....| .||+|+..+
T Consensus 109 ~~~L~pG~YvIVP----STf~P~~eg~F-~LrVfs~~~ 141 (148)
T 2qfe_A 109 LENIPSGIFNIIP----STFLPKQEGPF-FLDFNSIIP 141 (148)
T ss_dssp EEEECSEEEEEEE----EESSTTCCEEE-EEEEEESSC
T ss_pred EEEcCCCCEEEEe----ccCCCCCccce-EEEEEeCCC
Confidence 4678899999987 45555555444 478998764
No 237
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=26.91 E-value=47 Score=26.61 Aligned_cols=38 Identities=13% Similarity=0.236 Sum_probs=30.4
Q ss_pred EEEEeceEEEEEEeCC---------CeEEEEEEecCCEEEeCCCCee
Q 029255 103 RYCVAGSGYFDVRDRN---------EKWIRIWVKKGGMIVLPAGCYH 140 (196)
Q Consensus 103 ryil~G~g~f~v~~~~---------d~~~~i~~~~GDlI~VPaG~~H 140 (196)
.+=+.+++.|.++... +..+.+.++.||+++.+.++.+
T Consensus 132 svSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~ 178 (204)
T 3s57_A 132 SVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNT 178 (204)
T ss_dssp EEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHH
T ss_pred EEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhh
Confidence 4557889999998532 2457899999999999999876
No 238
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=26.24 E-value=62 Score=24.44 Aligned_cols=54 Identities=11% Similarity=0.106 Sum_probs=31.9
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEe---CCCCeeeeeecCCCcEEEEEEe
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVL---PAGCYHRFTLDTDNYIKAMRLF 156 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~V---PaG~~H~F~~~~~~~~~alRlF 156 (196)
.+.++||++|...... .+++. ..+.+||++=. =.|..+.++.........+++-
T Consensus 113 ~~~ly~I~~G~v~v~~--~~g~~--~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~ 169 (202)
T 3bpz_A 113 GKKMYFIQHGVVSVLT--KGNKE--MKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLS 169 (202)
T ss_dssp CCEEEEEEECEEEEEC--TTSCC--EEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEE
T ss_pred CCeEEEEeccEEEEEE--CCCeE--EEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEEE
Confidence 4689999999987754 34442 46899998732 1233444443333345555543
No 239
>2cw8_A Endonuclease PI-pkoii; hydrolase; 2.50A {Thermococcus kodakarensis} PDB: 2cw7_A
Probab=25.64 E-value=62 Score=29.65 Aligned_cols=16 Identities=19% Similarity=0.374 Sum_probs=13.5
Q ss_pred EecCCEEEeCCCCeee
Q 029255 126 VKKGGMIVLPAGCYHR 141 (196)
Q Consensus 126 ~~~GDlI~VPaG~~H~ 141 (196)
+++||+|.+|..+++-
T Consensus 114 lk~GD~v~~~~~~~~~ 129 (537)
T 2cw8_A 114 LKPGDLVAVPRRLELP 129 (537)
T ss_dssp CCTTCEEEEESCCCCC
T ss_pred CCCCCEEEEeeecCCc
Confidence 6789999999987764
No 240
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=24.53 E-value=24 Score=22.20 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=20.0
Q ss_pred EEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeecC
Q 029255 124 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 166 (196)
Q Consensus 124 i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~~ 166 (196)
+.+++||+|.|-. ...+.......+-++..||.|-|
T Consensus 20 Ls~~~Gd~i~v~~-------~~~~~W~~g~~~~~g~~G~fP~~ 55 (62)
T 2fpe_A 20 LELEVDDPLLVEL-------QAEDYWYEAYNMRTGARGVFPAY 55 (62)
T ss_dssp CCBCTTCEEEEEE-------ECTTSEEEEEETTTCCEEEEEGG
T ss_pred CcCCCCCEEEEEE-------ecCCCEEEEEECCCCCEEEechH
Confidence 6778888888731 12233334433345566777743
No 241
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=23.96 E-value=33 Score=21.94 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=21.1
Q ss_pred EEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeecC
Q 029255 124 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 166 (196)
Q Consensus 124 i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~~ 166 (196)
+.+++||+|.|=... ..+....+.+.-.+..||.|-|
T Consensus 25 Lsf~~Gd~i~v~~~~------~~~gW~~g~~~~~g~~G~fP~~ 61 (67)
T 3rnj_A 25 LSFKEGDLITLLVPE------ARDGWHYGESEKTKMRGWFPFS 61 (67)
T ss_dssp CCBCTTCEEEECSSS------CBTTEEEEEETTTCCEEEEEGG
T ss_pred ccCCCCCEEEEeecc------CCCCCEEEEECCCCCEEEEEHH
Confidence 678899999874321 1122333333335667888754
No 242
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=23.61 E-value=41 Score=26.32 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=19.3
Q ss_pred EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCe
Q 029255 103 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCY 139 (196)
Q Consensus 103 ryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~ 139 (196)
+|+.+|...-.+. .+ .+++||.|.+|.|..
T Consensus 105 ~~v~~~g~~~w~~-A~------eLk~GD~v~~~~~~~ 134 (186)
T 2jmz_A 105 VYISKTGEVLEIN-AE------MVKVGDYIYIPKNNT 134 (186)
T ss_dssp EEEEETTEEEEEE-GG------GCCTTSEEEEECSSS
T ss_pred EEEeCCCeEEEEE-hh------cCCCCCEEEecccCC
Confidence 6666654333443 22 388999999998643
No 243
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=23.54 E-value=15 Score=27.08 Aligned_cols=29 Identities=28% Similarity=0.559 Sum_probs=20.9
Q ss_pred EEEEe---ceEEEEEEeCCCeEEEEEEecCCEEEeC
Q 029255 103 RYCVA---GSGYFDVRDRNEKWIRIWVKKGGMIVLP 135 (196)
Q Consensus 103 ryil~---G~g~f~v~~~~d~~~~i~~~~GDlI~VP 135 (196)
.|++. |||..++.+.- ...+++||+|+|=
T Consensus 33 TYvI~GerGSG~I~lNGAA----Arl~~~GD~vII~ 64 (96)
T 1vc3_B 33 TYALPGERGSGVIGINGAA----AHLVKPGDLVILV 64 (96)
T ss_dssp EECEEECTTTTCEEEEGGG----GGTCCTTCEEEEE
T ss_pred EEEEEccCCCCeEEEchHH----HccCCCCCEEEEE
Confidence 45555 47889998543 2478999999873
No 244
>4dsd_A Putative periplasmic protein; BLIP-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.75A {Bacteroides ovatus}
Probab=23.18 E-value=1.2e+02 Score=22.54 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=28.3
Q ss_pred eeEEECCCCCCChHHHhhccccccccCcceEEEEEece----EEEEEEe---------CCCeEEEEEEecC
Q 029255 72 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGS----GYFDVRD---------RNEKWIRIWVKKG 129 (196)
Q Consensus 72 Dvv~l~p~~~p~~e~~~~~f~~eH~H~~dEiryil~G~----g~f~v~~---------~~d~~~~i~~~~G 129 (196)
|..+|.+..+| +..+.|...|.-...-+..-.+.. +.|.|.- .+|.|..|.|+.+
T Consensus 3 ~d~~i~~~~LP---~~a~~fi~~~Fp~~~i~~ve~e~~~~~~~~YeV~l~~G~ei~Fd~~G~W~ev~~~~~ 70 (129)
T 4dsd_A 3 DVITKDMNQLP---LPARNFINSNFTKPQVAHIKIDKDMMESTKYEVVLMDGTEIDFDSKGNWEEVSAKKG 70 (129)
T ss_dssp CEEECCGGGSC---HHHHHHHHHHSSSCCEEEEEEEECTTSCEEEEEEETTSCEEEECTTSCEEEEECCTT
T ss_pred CceEcChhhCC---HHHHHHHHHHCCCCceEEEEEecCcCCCccEEEEECCCcEEEEeCCCCEEEEecCcC
Confidence 55667777666 555566666554333222223321 3444431 3566777666554
No 245
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=22.98 E-value=1e+02 Score=24.99 Aligned_cols=55 Identities=9% Similarity=0.032 Sum_probs=33.2
Q ss_pred CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCee---eeeecCCCcEEEEEEe
Q 029255 98 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYH---RFTLDTDNYIKAMRLF 156 (196)
Q Consensus 98 ~~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H---~F~~~~~~~~~alRlF 156 (196)
..--+.|+++|+..+.+. +++ .+.+++||.+++-....- .........+..|+++
T Consensus 139 ~~~~~v~~l~G~~~v~~~--~~~--~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~l~ 196 (200)
T 1yll_A 139 ASTLLLFAQQDGVAISLQ--GQP--RGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVELD 196 (200)
T ss_dssp CSEEEEEESSSCEEEEET--TEE--EEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEEEE
T ss_pred CCEEEEEEccCcEEEEcC--CCc--eeecCCCCEEEEeCCCccceeEeccCCceEEEEEEEe
Confidence 345678899998777653 223 478999999998554322 2333333334455554
No 246
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=22.61 E-value=40 Score=21.42 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=19.0
Q ss_pred EEEecCCEEEeCCCCeeeeeecCCCcEEEEEEecCCCceeecC
Q 029255 124 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 166 (196)
Q Consensus 124 i~~~~GDlI~VPaG~~H~F~~~~~~~~~alRlF~~~~gW~~~~ 166 (196)
+.+++||+|.|-.. ..+....+...-.+..||+|-|
T Consensus 23 Ls~~~Gd~i~v~~~-------~~~gW~~g~~~~~g~~G~~P~~ 58 (65)
T 2j05_A 23 ISFLKGDMFIVHNE-------LEDGWMWVTNLRTDEQGLIVED 58 (65)
T ss_dssp CCBCTTCEEEEEEE-------CTTSEEEEEETTTCCEEEEEGG
T ss_pred CcCCCCCEEEEeEe-------cCCCEEEEEECCCCCEEEEEhH
Confidence 66778888776321 1222333333344566777743
No 247
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=22.22 E-value=16 Score=25.62 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=21.6
Q ss_pred cceEEEEEeceEEEEEEeCCCeE-EE--EEEecCCEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKW-IR--IWVKKGGMI 132 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~-~~--i~~~~GDlI 132 (196)
.+.+++|++|...+.. ..+++. +- -.+.+||++
T Consensus 47 ~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVT-TDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEEC-CSSCSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEEE-cCCCcceeeeeeeecCCCEe
Confidence 4779999999999543 233432 11 167889975
No 248
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=21.95 E-value=1.5e+02 Score=19.38 Aligned_cols=53 Identities=9% Similarity=-0.038 Sum_probs=33.3
Q ss_pred HhHHhhcCeEEEEeCCCCc---cChHHHHHHHHhcCCC-----eeeeEEE-CCCCCCChHHH
Q 029255 35 LDQLSELGVLSWRLDADNY---ETDEELKKIREDRGYS-----YMDFCEV-CPEKLPNYEEK 87 (196)
Q Consensus 35 ~~~L~~~GV~~~~~~~~~~---~~~~~i~~l~~~rGy~-----~~Dvv~l-~p~~~p~~e~~ 87 (196)
...|.++||.|-.++.+.. ......+.|++..|+. +.=+|.+ ....+..++++
T Consensus 21 k~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l 82 (87)
T 1aba_A 21 KRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQL 82 (87)
T ss_dssp HHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHH
T ss_pred HHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHH
Confidence 4678899999977776532 1235557788788887 5566666 44333444443
No 249
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=21.89 E-value=1.7e+02 Score=25.36 Aligned_cols=34 Identities=9% Similarity=-0.147 Sum_probs=24.0
Q ss_pred ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEE
Q 029255 100 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIV 133 (196)
Q Consensus 100 dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~ 133 (196)
+.+++|++|.....+...+...+--.+.+||++-
T Consensus 187 d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 187 DNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CEEEEEEECEEEEEEECSSCEEEEEEEESCCEEC
T ss_pred ceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEe
Confidence 6789999999988774223333344688999764
No 250
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=21.85 E-value=17 Score=27.02 Aligned_cols=30 Identities=13% Similarity=0.272 Sum_probs=21.5
Q ss_pred EEEEec--eEEEEEEeCCCeEEEEEEecCCEEEeCC
Q 029255 103 RYCVAG--SGYFDVRDRNEKWIRIWVKKGGMIVLPA 136 (196)
Q Consensus 103 ryil~G--~g~f~v~~~~d~~~~i~~~~GDlI~VPa 136 (196)
.|++.| ||..++.+.- ...+++||+|+|=+
T Consensus 33 TYvI~GeGSG~I~lNGAA----Arl~~~GD~vII~a 64 (102)
T 3plx_B 33 TYTIATQEEGVVCLNGAA----ARLAEVGDKVIIMS 64 (102)
T ss_dssp EECEEESSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEEcCCCCEEEeCcHH----HhccCCCCEEEEEE
Confidence 466665 6889998543 24789999998854
No 251
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=21.73 E-value=1.8e+02 Score=24.90 Aligned_cols=57 Identities=14% Similarity=0.028 Sum_probs=36.4
Q ss_pred cceEEEEEeceEEEEEEeCCCe---EEEEEEecCCEEEeCC--CCeeeeeecCCCcEEEEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKAMRL 155 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~---~~~i~~~~GDlI~VPa--G~~H~F~~~~~~~~~alRl 155 (196)
.+.+++|++|.........+++ .+--.+.+||++--.+ |.++..+.........+++
T Consensus 83 ~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i 144 (469)
T 1o7f_A 83 GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRI 144 (469)
T ss_dssp CCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEE
T ss_pred CCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEE
Confidence 3678999999998887655542 4556789999875433 3334444333334566665
No 252
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=21.66 E-value=40 Score=25.24 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=20.7
Q ss_pred EeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCeeee
Q 029255 106 VAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRF 142 (196)
Q Consensus 106 l~G~g~f~v~~~~d~~~~i~~~~GDlI~VPaG~~H~F 142 (196)
-=|.|.|.|. +..+ .|++|+.|.|+..|-
T Consensus 20 ~y~~g~f~i~---g~~~-----~g~i~v~p~~~~~W~ 48 (128)
T 2fi9_A 20 AYGNGGFRFA---DMSH-----RGSIICIPSGIYGID 48 (128)
T ss_dssp EEETTEEEET---TEEE-----ESEEEEETTEEEEEC
T ss_pred EEcCCEEEEC---CEEE-----EeCEEEeCCCeeccC
Confidence 3456667774 4433 499999999998885
No 253
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=21.51 E-value=66 Score=26.51 Aligned_cols=40 Identities=15% Similarity=0.019 Sum_probs=29.7
Q ss_pred eEEEEEEecCCEEEeCCCCeeeeeecC-----CCcEEEEEEecCC
Q 029255 120 KWIRIWVKKGGMIVLPAGCYHRFTLDT-----DNYIKAMRLFVGD 159 (196)
Q Consensus 120 ~~~~i~~~~GDlI~VPaG~~H~F~~~~-----~~~~~alRlF~~~ 159 (196)
.++.+.+++||+++.=..+.|+-.... ......+++....
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~ 262 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSF 262 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETT
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCC
Confidence 467899999999999999999975433 2335666666553
No 254
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=21.27 E-value=21 Score=27.01 Aligned_cols=29 Identities=10% Similarity=0.173 Sum_probs=21.0
Q ss_pred EEEEe---ceEEEEEEeCCCeEEEEEEecCCEEEeC
Q 029255 103 RYCVA---GSGYFDVRDRNEKWIRIWVKKGGMIVLP 135 (196)
Q Consensus 103 ryil~---G~g~f~v~~~~d~~~~i~~~~GDlI~VP 135 (196)
.|++. |||..++.+.- ...+++||+|+|=
T Consensus 60 TYvI~GerGSg~I~lNGAA----Ar~~~~GD~vII~ 91 (114)
T 3oug_A 60 TYVIKGEPNSKTIALNGPA----ARRCEIGDQLFII 91 (114)
T ss_dssp EEEEEECTTSCCEEEEGGG----GGGCCTTCEEEEE
T ss_pred EEEEEccCCCCEEEeCCHH----HhccCCCCEEEEE
Confidence 46665 47889998543 2478999999883
No 255
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=21.09 E-value=61 Score=22.37 Aligned_cols=29 Identities=17% Similarity=0.251 Sum_probs=21.7
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~ 133 (196)
.+.+++|++|....... + ...+.+||++-
T Consensus 52 ~~~~y~i~~G~v~~~~~--~----~~~~~~G~~~G 80 (138)
T 1vp6_A 52 GDRMFFVVEGSVSVATP--N----PVELGPGAFFG 80 (138)
T ss_dssp CCEEEEEEESCEEECSS--S----CEEECTTCEEC
T ss_pred cceEEEEEeeEEEEEeC--C----cceECCCCEee
Confidence 46799999999887654 2 24789999863
No 256
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=20.79 E-value=36 Score=21.99 Aligned_cols=11 Identities=18% Similarity=0.307 Sum_probs=7.6
Q ss_pred EEEecCCEEEe
Q 029255 124 IWVKKGGMIVL 134 (196)
Q Consensus 124 i~~~~GDlI~V 134 (196)
+.+++||+|.|
T Consensus 32 Ls~~~Gd~i~v 42 (73)
T 3h0h_A 32 LSFHKGEKFQI 42 (73)
T ss_dssp CCBCTTCEEEE
T ss_pred ceEeCCCEEEE
Confidence 56777777765
No 257
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=20.65 E-value=35 Score=20.91 Aligned_cols=11 Identities=9% Similarity=0.277 Sum_probs=8.6
Q ss_pred EEEecCCEEEe
Q 029255 124 IWVKKGGMIVL 134 (196)
Q Consensus 124 i~~~~GDlI~V 134 (196)
+.+++||.|.|
T Consensus 18 Ls~~~Gd~i~v 28 (58)
T 4e6r_A 18 LSLVXGSRVTV 28 (58)
T ss_dssp CCBCTTCEEEE
T ss_pred eeEeCCCEEEE
Confidence 67888888776
No 258
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=20.42 E-value=1.9e+02 Score=19.86 Aligned_cols=31 Identities=6% Similarity=-0.088 Sum_probs=22.9
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEE
Q 029255 99 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIV 133 (196)
Q Consensus 99 ~dEiryil~G~g~f~v~~~~d~~~~i~~~~GDlI~ 133 (196)
.+.+++|++|...... +++.+ -.+.+||++-
T Consensus 64 ~~~~y~i~~G~v~~~~---~g~~~-~~~~~G~~fG 94 (139)
T 3ocp_A 64 GSLVYVMEDGKVEVTK---EGVKL-CTMGPGKVFG 94 (139)
T ss_dssp CCEEEEEEECCEEEEE---TTEEE-EEECTTCEES
T ss_pred CCEEEEEEeCEEEEEE---CCEEE-EEeCCCCEec
Confidence 4789999999988743 45543 5679999863
Done!