BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029260
(196 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|363807126|ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
gi|255640824|gb|ACU20695.1| unknown [Glycine max]
Length = 216
Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 160/183 (87%)
Query: 10 PINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLL 69
P +G+D DIYPLSSYYFGSK+A+P KD TL +RVLRMKSNY A G+RTCVEAVLL
Sbjct: 17 PNSGNDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLL 76
Query: 70 VELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGEC 129
VELFKHPHLLLLQ+RNSI+KLPGGRLRPGESD GLKRKL RKLS+NEDG +WEVGEC
Sbjct: 77 VELFKHPHLLLLQIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSVNEDGDGSEWEVGEC 136
Query: 130 LGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
LGMWW+PDFETL++P+ PPNV++PKECTK+FLVKLP S+K VPKN+++LAVPLCQ+HEN
Sbjct: 137 LGMWWRPDFETLMYPFIPPNVEKPKECTKVFLVKLPESRKLIVPKNMRVLAVPLCQVHEN 196
Query: 190 HKV 192
HK
Sbjct: 197 HKT 199
>gi|255546065|ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
gi|223546548|gb|EEF48046.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
Length = 214
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/180 (78%), Positives = 159/180 (88%), Gaps = 2/180 (1%)
Query: 13 GSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVEL 72
S G+V+DIYPLS YYFGSK+ +PF+DETL +RV RMKSNY AHGLRTCVEAV+LVEL
Sbjct: 15 ASRDQGFVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILVEL 74
Query: 73 FKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132
FKHPHLLLLQ++NSIFKLPGGR+RPGESDI GLKRKL+RKLS N+D + DWEVGECLGM
Sbjct: 75 FKHPHLLLLQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNNQD--QTDWEVGECLGM 132
Query: 133 WWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
WW+PDFETLL+PY PPN+K PKECTKLFLV+LP S KF VPKNLKLLAVPL QIH+NHK
Sbjct: 133 WWRPDFETLLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKT 192
>gi|225444838|ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Vitis vinifera]
Length = 284
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/195 (72%), Positives = 163/195 (83%), Gaps = 3/195 (1%)
Query: 1 MSDEMGASVPINGSDRN---GYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDA 57
M+ EMG+S + S +V+DIYPLS YYFGSK+ + K+ETL +R+LRMKSNY
Sbjct: 68 MNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSR 127
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE 117
+G RTCV AV+LVELFKHPHLLLLQV+NS FKLPGGRLRPGES+I GLKRKL+RKLS+NE
Sbjct: 128 YGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNE 187
Query: 118 DGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLK 177
DG DWEVGECLGMWW+PDFETLL+PY PPNVK PKECTKLFLVKLP S+KF VPKNLK
Sbjct: 188 DGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLK 247
Query: 178 LLAVPLCQIHENHKV 192
LLA+PLCQ+HEN K
Sbjct: 248 LLAIPLCQLHENDKT 262
>gi|297738624|emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/195 (72%), Positives = 163/195 (83%), Gaps = 3/195 (1%)
Query: 1 MSDEMGASVPINGSDRN---GYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDA 57
M+ EMG+S + S +V+DIYPLS YYFGSK+ + K+ETL +R+LRMKSNY
Sbjct: 75 MNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSR 134
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE 117
+G RTCV AV+LVELFKHPHLLLLQV+NS FKLPGGRLRPGES+I GLKRKL+RKLS+NE
Sbjct: 135 YGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNE 194
Query: 118 DGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLK 177
DG DWEVGECLGMWW+PDFETLL+PY PPNVK PKECTKLFLVKLP S+KF VPKNLK
Sbjct: 195 DGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLK 254
Query: 178 LLAVPLCQIHENHKV 192
LLA+PLCQ+HEN K
Sbjct: 255 LLAIPLCQLHENDKT 269
>gi|18417474|ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|20147173|gb|AAM10303.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|21554114|gb|AAM63194.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gi|332660282|gb|AEE85682.1| CFIM-25-like protein [Arabidopsis thaliana]
Length = 222
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/185 (73%), Positives = 157/185 (84%), Gaps = 4/185 (2%)
Query: 12 NGSDRNGYV----VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAV 67
N + RN V VD+YPLSSYYFGSKEA+ KDE + +RV+R+KSNY AHGLRTCVEAV
Sbjct: 16 NTTRRNDVVHDLMVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAV 75
Query: 68 LLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVG 127
LLVELFKHPH+LLLQ RNSIFKLPGGRLRPGESDI GLKRKL KLS+NE+ G +EVG
Sbjct: 76 LLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVG 135
Query: 128 ECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIH 187
EC+GMWW+P+FETL++P+ PPN+K PKECTKLFLV+LPV Q+F VPKN KLLAVPLCQ+H
Sbjct: 136 ECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLH 195
Query: 188 ENHKV 192
EN K
Sbjct: 196 ENEKT 200
>gi|449446606|ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
Length = 217
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 136/172 (79%), Positives = 147/172 (85%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+DIYPLS+YYFGSKE + FKDETL +RVLRMKSNY AHGLRTCVEAV+LVELFKHPHLLL
Sbjct: 24 IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLL 83
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
Q+RNSIFKLPGGR+RP ESDI GL RKLT+KLS N WEV ECLGMWW+PDFET
Sbjct: 84 FQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFET 143
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
LLFPY NVK KECTKLFLVKLP S+KF VPKNLKL+AVPLCQIHENHK
Sbjct: 144 LLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKT 195
>gi|356558387|ref|XP_003547488.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Glycine max]
Length = 233
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 153/183 (83%)
Query: 10 PINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLL 69
P +G+D DIYPLSSYYFGSK+A P K T +RVLRMKSNY A G+RTCVEAV+L
Sbjct: 33 PNSGNDDQSLEFDIYPLSSYYFGSKDAFPSKYLTSADRVLRMKSNYAARGIRTCVEAVVL 92
Query: 70 VELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGEC 129
VELFKHPHLLLLQ+RNSI+KLPGGRLRPGESD GLKRKL RKLS+ EDG +WEVGEC
Sbjct: 93 VELFKHPHLLLLQIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSIIEDGDGSEWEVGEC 152
Query: 130 LGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
L MWW+PDFETL+FP PPNVK+ KEC K+FLVKLP S+KF VPKN++LLAVPLCQ+HEN
Sbjct: 153 LEMWWRPDFETLVFPCLPPNVKQTKECIKVFLVKLPESRKFIVPKNMRLLAVPLCQVHEN 212
Query: 190 HKV 192
HK
Sbjct: 213 HKT 215
>gi|224087967|ref|XP_002308275.1| predicted protein [Populus trichocarpa]
gi|222854251|gb|EEE91798.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 156/182 (85%), Gaps = 3/182 (1%)
Query: 12 NGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVE 71
+ ++ V++IYPL SYYFGSK+ I F+DET+ +RV RMKSN+ A GLRT V+AV+LVE
Sbjct: 10 DNNNHQSTVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSARGLRTSVQAVMLVE 69
Query: 72 LFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVD-WEVGECL 130
LFKHPHLLLLQVRN+ FKLPGGRLRPGESDI GL+RKL+R LS+NED E D WEVG+CL
Sbjct: 70 LFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNED--ETDHWEVGDCL 127
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENH 190
GMWW+ DFETLL+PY PPN+K PKECTKL++VKLP S+KF VPKNLKLLAVPLCQ+HENH
Sbjct: 128 GMWWRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENH 187
Query: 191 KV 192
K
Sbjct: 188 KT 189
>gi|297799004|ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
gi|297313222|gb|EFH43645.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 157/193 (81%), Gaps = 4/193 (2%)
Query: 4 EMGASVPINGSDRNGYV----VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHG 59
+M + N + RN V V++YPLSSYYF S++A+ KDE + +RV+R+KSNY AHG
Sbjct: 9 DMEETSEENTTRRNHVVHDLMVELYPLSSYYFSSRDALRVKDEIISDRVIRLKSNYAAHG 68
Query: 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG 119
LRTCVEAVLLVEL KHPH+LLLQ RNSIFKLPGGRLRPGESDI G+KRKL KLS+NE+
Sbjct: 69 LRTCVEAVLLVELLKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGVKRKLASKLSVNENV 128
Query: 120 GEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLL 179
EVGEC+GMWW+P+FETL++P+ PPNVK PKECTKLFLV+LPV+Q+F VPKN KLL
Sbjct: 129 VVPGLEVGECIGMWWRPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLL 188
Query: 180 AVPLCQIHENHKV 192
AVPLCQ+HEN K
Sbjct: 189 AVPLCQLHENEKT 201
>gi|388493122|gb|AFK34627.1| unknown [Medicago truncatula]
Length = 205
Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 147/173 (84%), Gaps = 7/173 (4%)
Query: 21 VDIYPLSSYYFGSKE-AIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V+IYPL+SYYFGSKE AIP KD +L R KSNYDA G+RTCVEAV++VELFKHPHLL
Sbjct: 17 VNIYPLNSYYFGSKEDAIPSKDHSLQ----RFKSNYDARGMRTCVEAVMMVELFKHPHLL 72
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
L Q++NSIFKLPGGRLRPGESD GLKRKL RKLS +E+ E WEVGECLGMWW+PDFE
Sbjct: 73 LFQIKNSIFKLPGGRLRPGESDTDGLKRKLARKLSADENLAE--WEVGECLGMWWRPDFE 130
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
T ++P+ PPNVK PKECTKLFLV+LP S++F VPKN+KLL+VPLCQI +NHK
Sbjct: 131 TSMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQIRDNHKT 183
>gi|226502762|ref|NP_001147338.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
gi|195610244|gb|ACG26952.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 224
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 147/197 (74%), Gaps = 8/197 (4%)
Query: 1 MSDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEA--IPFKDETLYNRVLRMKSNYDAH 58
MS+ + VP + NG VDIYPLS YYFG+++A +P ET +R LR+K+N+ AH
Sbjct: 9 MSETVPTVVPAAARE-NG--VDIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAH 65
Query: 59 GLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED 118
GLRT V VLLVELF HPH+LLLQVRNS F LPGGRLRPGE ++ GLKRKL+ KLS+ +D
Sbjct: 66 GLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDD 125
Query: 119 GGEV---DWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKN 175
V DW++G+C+GMWW+ +FE + FPY PP + KEC KLFL++LP+S++F VP+N
Sbjct: 126 AETVEEEDWQIGQCIGMWWRSEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRN 185
Query: 176 LKLLAVPLCQIHENHKV 192
+KLLAVPL QIH N +V
Sbjct: 186 MKLLAVPLSQIHGNAQV 202
>gi|413922202|gb|AFW62134.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 277
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 147/197 (74%), Gaps = 8/197 (4%)
Query: 1 MSDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEA--IPFKDETLYNRVLRMKSNYDAH 58
MS+ + VP + NG VDIYPLS YYFG+++A +P ET +R LR+K+N+ AH
Sbjct: 62 MSETVPTVVPAAARE-NG--VDIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAH 118
Query: 59 GLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED 118
GLRT V VLLVELF HPH+LLLQVRNS F LPGGRLRPGE ++ GLKRKL+ KLS+ +D
Sbjct: 119 GLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDD 178
Query: 119 GGEV---DWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKN 175
V DW++G+C+GMWW+ +FE + FPY PP + KEC KLFL++LP+S++F VP+N
Sbjct: 179 VEAVEEEDWQIGQCIGMWWRSEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRN 238
Query: 176 LKLLAVPLCQIHENHKV 192
+KLLAVPL QIH N +V
Sbjct: 239 MKLLAVPLSQIHGNAQV 255
>gi|259489948|ref|NP_001159123.1| uncharacterized protein LOC100304199 [Zea mays]
gi|219887529|gb|ACL54139.1| unknown [Zea mays]
Length = 224
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 147/197 (74%), Gaps = 8/197 (4%)
Query: 1 MSDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEA--IPFKDETLYNRVLRMKSNYDAH 58
MS+ + VP + NG VDIYPLS YYFG+++A +P ET +R LR+K+N+ AH
Sbjct: 9 MSETVPTVVPAAARE-NG--VDIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAH 65
Query: 59 GLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED 118
GLRT V VLLVELF HPH+LLLQVRNS F LPGGRLRPGE ++ GLKRKL+ KLS+ +D
Sbjct: 66 GLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDD 125
Query: 119 GGEV---DWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKN 175
V DW++G+C+GMWW+ +FE + FPY PP + KEC KLFL++LP+S++F VP+N
Sbjct: 126 VEAVEEEDWQIGQCIGMWWRSEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRN 185
Query: 176 LKLLAVPLCQIHENHKV 192
+KLLAVPL QIH N +V
Sbjct: 186 MKLLAVPLSQIHGNAQV 202
>gi|326505750|dbj|BAJ95546.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 213
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
Query: 1 MSDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGL 60
M EM A V S V IYPL YYFG+K+A P ET +R LR+K+N+ A GL
Sbjct: 1 MGLEM-APVATESSPEQQPEVAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGL 59
Query: 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
RTCV VLLVEL HPH+LLLQVRNS F LPGGRLRP E D+ GLKRKL+ KL+ + G
Sbjct: 60 RTCVHGVLLVELSGHPHVLLLQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNG 119
Query: 121 EVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLA 180
+ W++GEC+GMWW+ +F+ FPY PPN + KEC KLFLV+LP++++F VP+NLKLLA
Sbjct: 120 DHHWQIGECIGMWWRSEFDARPFPYPPPNTRASKECVKLFLVRLPMARQFVVPRNLKLLA 179
Query: 181 VPLCQIHENHKV 192
VPL QIH+N +V
Sbjct: 180 VPLSQIHDNAQV 191
>gi|242081379|ref|XP_002445458.1| hypothetical protein SORBIDRAFT_07g019840 [Sorghum bicolor]
gi|241941808|gb|EES14953.1| hypothetical protein SORBIDRAFT_07g019840 [Sorghum bicolor]
Length = 233
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/184 (59%), Positives = 140/184 (76%), Gaps = 9/184 (4%)
Query: 18 GYVVDIYPLSSYYFGSKEA---IPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFK 74
G VDIYPL+ YYFG+++A +P ET +R LR+K+N+ A GLRT V VLLVELF
Sbjct: 28 GVDVDIYPLTRYYFGARDAAAAVPRGLETAADRALRLKANFAARGLRTSVHGVLLVELFD 87
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL---NEDGG---EVDWEVGE 128
HPHLLLLQVRNS F LPGGRLRPGE ++ GLKRKL+ KLS ++D E DW++GE
Sbjct: 88 HPHLLLLQVRNSSFLLPGGRLRPGEEEVQGLKRKLSSKLSFVDADDDQTIEEEDDWQIGE 147
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188
C+GMWW+ +FE + FPY PP+ + PKEC KLFLV+LP+S++F VP+N+KLLAVPL Q+H
Sbjct: 148 CIGMWWRSEFEAIPFPYMPPSFRAPKECIKLFLVRLPMSRQFIVPRNMKLLAVPLSQVHG 207
Query: 189 NHKV 192
N +V
Sbjct: 208 NAQV 211
>gi|357147704|ref|XP_003574450.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 226
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 21 VDIYPLSSYYFGSKE-AIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V+IYPLS YYFG+++ A P + ET +R LR+K+N+ AHGLRTCV VLLVEL PHLL
Sbjct: 31 VEIYPLSRYYFGARDPASPARAETAADRALRLKANFAAHGLRTCVHGVLLVELLGRPHLL 90
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGE-VDWEVGECLGMWWKPDF 138
LLQ RNS F LPGGRLRPGE D+ GL+RKL+ KLS + E W++GEC+GM W+ DF
Sbjct: 91 LLQARNSSFLLPGGRLRPGEQDVQGLRRKLSSKLSADGHQQEDYGWQIGECIGMCWRSDF 150
Query: 139 ETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
E+ FPY PPN + PKECTK+FL++LP+S++F VP+NLKLLAVPL QIH+N +V
Sbjct: 151 ESGPFPYLPPNTRAPKECTKMFLIRLPMSRRFIVPRNLKLLAVPLSQIHDNAQV 204
>gi|168012875|ref|XP_001759127.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689826|gb|EDQ76196.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 200
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 132/173 (76%)
Query: 17 NGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
+G VV++YPLSSY FGSKEA KD ++ +R+ RMK NY G+RT VE +LLV+ HP
Sbjct: 3 SGPVVNVYPLSSYTFGSKEAKMEKDTSVADRLARMKQNYMKEGMRTSVEGILLVQEHNHP 62
Query: 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKP 136
H+LLLQ+ N+ FKLPGGRL+ GE++I GLKRKLT KL+ + +W++GEC MWW+P
Sbjct: 63 HVLLLQIGNTFFKLPGGRLKTGENEIEGLKRKLTSKLAPTASSIQPEWQIGECAAMWWRP 122
Query: 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+FETLL+PY PP++ +PKEC KLF+V L Q F VPKNLKLLAVPL ++++N
Sbjct: 123 NFETLLYPYQPPHITKPKECKKLFVVCLSERQYFAVPKNLKLLAVPLFELYDN 175
>gi|255539475|ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
gi|223549917|gb|EEF51404.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
Length = 200
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 130/173 (75%)
Query: 17 NGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
N VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HP
Sbjct: 3 NSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 62
Query: 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKP 136
H+LLLQ+ N+ KLPGGRL+PGE++I GLKRKLT KL N DW++GEC+ +WW+P
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRP 122
Query: 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+FET+++PY PP++ +PKEC KLFLV L + F VPKNLKLLAVPL ++++N
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 175
>gi|449432171|ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
Length = 200
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 131/170 (77%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ KHPH+L
Sbjct: 6 VVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++I GLKRKLT KL N + DW++GEC+ +WW+P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KLF+V L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN 175
>gi|90399078|emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 90/166 (54%), Positives = 127/166 (76%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+++
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 177
>gi|225454123|ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Vitis vinifera]
gi|297745235|emb|CBI40315.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 131/170 (77%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+L
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++I GLKRKL+ KL+ N + DW++GEC+ +WW+P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KLF+V L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN 175
>gi|388513689|gb|AFK44906.1| unknown [Medicago truncatula]
Length = 200
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 129/170 (75%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VE +LLV+ HPH+L
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++I GLKRKLT KL N G DW++GEC+ +WW+P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KLFLV L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 175
>gi|225470159|ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Vitis vinifera]
gi|147788664|emb|CAN61008.1| hypothetical protein VITISV_016616 [Vitis vinifera]
gi|302143896|emb|CBI22757.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 132/170 (77%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RM+ NY G+RT V+A+LLV+ HPH+L
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMRVNYMKEGMRTTVDAILLVQEHTHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++I GLKRKL+ KL+ N G + DW++GEC+ +WW+P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPDWQIGECVAIWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KLF+V L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN 175
>gi|125561458|gb|EAZ06906.1| hypothetical protein OsI_29145 [Oryza sativa Indica Group]
Length = 226
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 135/186 (72%), Gaps = 10/186 (5%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLY----NRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
V+IYPL YYFG+++ +R LR+K+N+ AHGLRT V VLLVELF HP
Sbjct: 23 VEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHP 82
Query: 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN------EDGGEVDWEVGECL 130
H+LLLQVRNS F LPGGRLRPGE D+ GLKRKL+ KLS+ + G+ +W++GEC+
Sbjct: 83 HVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDDKDGDGDDEWQIGECI 142
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENH 190
GMWW+ +F+ FPY PN + PKEC KLFL+KLPVS++F VP+N+KLLAVPL QIH+N
Sbjct: 143 GMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDNA 202
Query: 191 KVQFSL 196
+V S+
Sbjct: 203 QVYGSI 208
>gi|326499514|dbj|BAJ86068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 139/192 (72%), Gaps = 5/192 (2%)
Query: 3 DEMGASVPINGSDR-----NGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDA 57
+E G++ P + + VV++YPL++Y FG+KEA KD ++ +R+ RMK NY
Sbjct: 52 EERGSARPSEAGEEMVGAPSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMK 111
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE 117
G+RT VEA+LLV+ HPH+LLLQ+ N+ KLPGGRL+PGES+I GLKRKL KL++N
Sbjct: 112 EGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNS 171
Query: 118 DGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLK 177
+W+VGEC+ WW+P+FET+++PY PP++ +PKEC KLF+V L + F VP+NLK
Sbjct: 172 PSFPPNWQVGECVAEWWRPNFETVMYPYCPPHISKPKECKKLFIVHLTEREYFAVPRNLK 231
Query: 178 LLAVPLCQIHEN 189
LLAVPL ++++N
Sbjct: 232 LLAVPLFELYDN 243
>gi|224134811|ref|XP_002321911.1| predicted protein [Populus trichocarpa]
gi|118487488|gb|ABK95571.1| unknown [Populus trichocarpa]
gi|222868907|gb|EEF06038.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 128/170 (75%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+L
Sbjct: 8 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++I GLKRKLT KL N DW++GEC+ WW+P+FE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVATWWRPNFE 127
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KL+LV L + F VPKNLKLLAVPL ++++N
Sbjct: 128 TIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDN 177
>gi|115476302|ref|NP_001061747.1| Os08g0398800 [Oryza sativa Japonica Group]
gi|37805958|dbj|BAC99373.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|37806023|dbj|BAC99435.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|113623716|dbj|BAF23661.1| Os08g0398800 [Oryza sativa Japonica Group]
gi|125603321|gb|EAZ42646.1| hypothetical protein OsJ_27211 [Oryza sativa Japonica Group]
gi|215692402|dbj|BAG87822.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708715|dbj|BAG93984.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 226
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 135/186 (72%), Gaps = 10/186 (5%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLY----NRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
V+IYPL YYFG+++ +R LR+K+N+ AHGLRT V VLLVELF HP
Sbjct: 23 VEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHP 82
Query: 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN------EDGGEVDWEVGECL 130
H+LLLQVRNS F LPGGRLRPGE D+ GLKRKL+ KLS+ + G+ +W++GEC+
Sbjct: 83 HVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDDEDGDGDDEWQIGECI 142
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENH 190
GMWW+ +F+ FPY PN + PKEC KLFL+KLPVS++F VP+N+KLLAVPL QIH+N
Sbjct: 143 GMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDNA 202
Query: 191 KVQFSL 196
+V S+
Sbjct: 203 QVYGSI 208
>gi|388515089|gb|AFK45606.1| unknown [Lotus japonicus]
Length = 200
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 128/170 (75%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VE +LLV+ HPH+L
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++I GLKRKLT KL N DW++GEC+ +W +P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWRRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KLFLV LP + F VPKNLKLLAVPL ++++N
Sbjct: 126 TIMYPYRPPHITKPKECKKLFLVHLPEREYFAVPKNLKLLAVPLFELYDN 175
>gi|351723959|ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
gi|255627433|gb|ACU14061.1| unknown [Glycine max]
Length = 200
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 127/170 (74%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VE +LLV+ HPH+L
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++ GLKRKLT KL N DW++GEC+ +WW+P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KLFLV L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 175
>gi|356535879|ref|XP_003536470.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Glycine max]
Length = 200
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 126/170 (74%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VE +LLV+ HPH+L
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ K PGGRL+PGE++I GLKRKLT KL N DW++ EC+ +WW+P+FE
Sbjct: 66 LLQIGNTFCKXPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQISECVAIWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC KLFLV L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 175
>gi|440795771|gb|ELR16887.1| cleavage and polyadenylation specific factor 5, putative
[Acanthamoeba castellanii str. Neff]
Length = 217
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 126/170 (74%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++Y L Y FG KEA KD ++ R+LRMK Y+ G+R V+AVLLV HPH+L
Sbjct: 25 TINLYNLEKYTFGKKEAQMEKDTSVAARLLRMKDMYEREGMRRTVDAVLLVHQHNHPHVL 84
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ FKLPGGRL+PGE+++ GLKRKLT+KL+ N ++DWEVGE L WW+P+FE
Sbjct: 85 LLQIGNTFFKLPGGRLKPGENEVDGLKRKLTKKLAPNYSNYQLDWEVGELLCQWWRPNFE 144
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
TL +PY PP++ RPKEC K+FLV+LP F VPKNLKLLAVP+ +++N
Sbjct: 145 TLQYPYIPPHITRPKECKKIFLVQLPERCVFAVPKNLKLLAVPIFDLYDN 194
>gi|297803568|ref|XP_002869668.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
lyrata]
gi|297315504|gb|EFH45927.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 127/170 (74%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLS+Y FG+KE KD ++ +R+ RMK NY G+RT VE +LLV+ HPH+L
Sbjct: 6 VVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE+++ GLKRKLT KL N DW+VGEC+ WW+P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEVDGLKRKLTSKLGGNSAALVPDWKVGECVATWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC +LF+V L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TMMYPYCPPHITKPKECKRLFIVHLSEKEYFAVPKNLKLLAVPLFELYDN 175
>gi|226508740|ref|NP_001148753.1| LOC100282369 [Zea mays]
gi|195621890|gb|ACG32775.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
gi|224032173|gb|ACN35162.1| unknown [Zea mays]
gi|413920017|gb|AFW59949.1| cleavage and polyadenylation specificity factor 5 isoform 1 [Zea
mays]
gi|413920018|gb|AFW59950.1| cleavage and polyadenylation specificity factor 5 isoform 2 [Zea
mays]
Length = 202
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 129/168 (76%)
Query: 22 DIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLL 81
++YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLL
Sbjct: 10 NVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 82 QVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETL 141
Q+ N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+
Sbjct: 70 QIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETV 129
Query: 142 LFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
++PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 130 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 177
>gi|315259982|gb|ADT92189.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 223
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 129/168 (76%)
Query: 22 DIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLL 81
++YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLL
Sbjct: 10 NVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 82 QVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETL 141
Q+ N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+
Sbjct: 70 QIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETV 129
Query: 142 LFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
++PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 130 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 177
>gi|30686923|ref|NP_194285.2| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
gi|26451195|dbj|BAC42701.1| unknown protein [Arabidopsis thaliana]
gi|28973229|gb|AAO63939.1| unknown protein [Arabidopsis thaliana]
gi|110736890|dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana]
gi|332659676|gb|AEE85076.1| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
Length = 200
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 125/170 (73%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLS+Y FG+KE KD ++ +R+ RMK NY G+RT VE +LLV+ HPH+L
Sbjct: 6 VVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ N+ KLPGGRL+PGE++ GLKRKLT KL N DW VGEC+ WW+P+FE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+++PY PP++ +PKEC +L++V L + F VPKNLKLLAVPL ++++N
Sbjct: 126 TMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDN 175
>gi|226493713|ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea mays]
gi|194705542|gb|ACF86855.1| unknown [Zea mays]
gi|218195850|gb|EEC78277.1| hypothetical protein OsI_17973 [Oryza sativa Indica Group]
gi|222629797|gb|EEE61929.1| hypothetical protein OsJ_16671 [Oryza sativa Japonica Group]
gi|223944619|gb|ACN26393.1| unknown [Zea mays]
gi|414584722|tpg|DAA35293.1| TPA: cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 127/166 (76%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+++
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 177
>gi|115461402|ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group]
gi|113565872|dbj|BAF16215.1| Os04g0683100, partial [Oryza sativa Japonica Group]
Length = 259
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 126/166 (75%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 69 YPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 128
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+++
Sbjct: 129 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 188
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 189 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 234
>gi|242077722|ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
gi|241939980|gb|EES13125.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
Length = 202
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 127/166 (76%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W++GEC+ +WW+P+FET+++
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQIGECVAVWWRPNFETVMY 131
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 177
>gi|357166798|ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 127/166 (76%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 13 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 72
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+++
Sbjct: 73 GNTFCKLPGGRLKPGENEIDGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 132
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 133 PYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDN 178
>gi|32488646|emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]
Length = 202
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 126/166 (75%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+++
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 177
>gi|414584721|tpg|DAA35292.1| TPA: hypothetical protein ZEAMMB73_890316 [Zea mays]
Length = 186
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 127/166 (76%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+++
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDN 177
>gi|195622596|gb|ACG33128.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 127/166 (76%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLLQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL++N +W+VGEC+ +WW+P+FET+++
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F VP+NLKLLAVPL ++++N
Sbjct: 132 PYCPPHITKPKECKKLFIVHLFEREYFAVPRNLKLLAVPLFELYDN 177
>gi|147796474|emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]
Length = 244
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 28/201 (13%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+L
Sbjct: 41 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 100
Query: 80 LLQVRNSIFKLPGGRLRPGE----------------------------SDIYGLKRKLTR 111
LLQ+ N+ KLPGGRL+PGE ++I GLKRKL+
Sbjct: 101 LLQIGNTFCKLPGGRLKPGENGAILDPLLRLLCMCIHVCMSYFFLKIFAEIEGLKRKLSS 160
Query: 112 KLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171
KL+ N + DW++GEC+ +WW+P+FET+++PY PP++ +PKEC KLF+V L + F
Sbjct: 161 KLAANSLALQPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFA 220
Query: 172 VPKNLKLLAVPLCQIHENHKV 192
VPKNLKLLAVPL ++++N +V
Sbjct: 221 VPKNLKLLAVPLFELYDNVQV 241
>gi|224285141|gb|ACN40298.1| unknown [Picea sitchensis]
Length = 198
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 127/170 (74%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV ++PLS Y FG KEA KD L +R+ RM++N+ GLRT VE +LLV + HPHLL
Sbjct: 6 VVKVHPLSCYSFGKKEAKVDKDIFLSDRLDRMRANFMRDGLRTYVEGILLVYEYGHPHLL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ N I +LPGGRLRPGE++I GLKRKLT KLS + + W++GEC G+WW+P+FE
Sbjct: 66 LLQKGNKIIRLPGGRLRPGENEIEGLKRKLTSKLSSSSSSVQPIWQIGECAGVWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
TL++PY PP++ +PKEC K+F+V L +Q F +PKNLK+LAVPL ++ +N
Sbjct: 126 TLMYPYCPPHINKPKECKKIFIVHLSENQCFEIPKNLKILAVPLFELFDN 175
>gi|357166800|ref|XP_003580857.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 124/166 (74%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE KD ++ +R+ RMK NY G+RT VEA++LV+ HPH+LLLQ+
Sbjct: 13 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAIMLVQEHNHPHVLLLQI 72
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
N+ KLPGGRL+PGE++I GLKRKL KL +N +W+VGEC+G+WW+P+F+ +++
Sbjct: 73 GNTFCKLPGGRLKPGENEIDGLKRKLCSKLGVNSPSFPPNWQVGECVGVWWRPNFDNVMY 132
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY PP++ +PKEC KLF+V L + F +P+ LKL AVPL +I++N
Sbjct: 133 PYCPPHITKPKECKKLFIVHLTEREYFAIPRKLKLRAVPLFEIYDN 178
>gi|116779420|gb|ABK21275.1| unknown [Picea sitchensis]
Length = 177
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 117/150 (78%)
Query: 40 KDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGE 99
KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+LLLQ+ N+ KLPGGRL+PGE
Sbjct: 3 KDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGE 62
Query: 100 SDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKL 159
+++ GLKRKL+ KL+ N + DW++GEC+ +WW+P+FETL++PY PP++ +PKEC KL
Sbjct: 63 NEVEGLKRKLSSKLAANSTTLQPDWQIGECVAVWWRPNFETLMYPYCPPHITKPKECKKL 122
Query: 160 FLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
FLV L + F VPKNLKLLAVPL ++++N
Sbjct: 123 FLVHLSEREYFAVPKNLKLLAVPLFELYDN 152
>gi|4914406|emb|CAB43657.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gi|7269881|emb|CAB79740.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
Length = 185
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 118/185 (63%), Gaps = 41/185 (22%)
Query: 12 NGSDRNGYV----VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAV 67
N + RN V VD+YPLSSYYFGSKEA+ KDE + +R
Sbjct: 16 NTTRRNDVVHDLMVDLYPLSSYYFGSKEALRVKDEIISDR-------------------- 55
Query: 68 LLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVG 127
HPH+LLLQ RNSIFKLPGGRLRPGES GL L +N VG
Sbjct: 56 -------HPHVLLLQYRNSIFKLPGGRLRPGES---GLVCCFLASLCIN-------IAVG 98
Query: 128 ECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIH 187
EC+GMWW+P+FETL++P+ PPN+K PKECTKLFLV+LPV Q+F VPKN KLLAVPLCQ+H
Sbjct: 99 ECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLH 158
Query: 188 ENHKV 192
EN K
Sbjct: 159 ENEKT 163
>gi|2980795|emb|CAA18171.1| putative protein [Arabidopsis thaliana]
Length = 210
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 128/197 (64%), Gaps = 21/197 (10%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLS+Y FG+KE KD ++ +R+ RMK NY G+RT VE +LLV+ HPH+L
Sbjct: 6 VVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIY---------------GLKRKLTRKLSLNEDGGEVDW 124
LLQ+ N+ KLPGGRL+PGE+ I GLKRKLT KL N DW
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENGIQLPPFWVYYVVSAEADGLKRKLTSKLGGNSAALVPDW 125
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPK------ECTKLFLVKLPVSQKFFVPKNLKL 178
VGEC+ WW+P+FET+++PY PP++ +PK EC +L++V L + F VPKNLKL
Sbjct: 126 TVGECVATWWRPNFETMMYPYCPPHITKPKVVKKHNECKRLYIVHLSEKEYFAVPKNLKL 185
Query: 179 LAVPLCQIHENHKVQFS 195
LAVPL ++++N +V S
Sbjct: 186 LAVPLFELYDNVQVGIS 202
>gi|116207818|ref|XP_001229718.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183799|gb|EAQ91267.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 123/185 (66%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P+N + + +YPLS+Y FG KE P +D ++ R+ R++ +Y AHG+R E +L
Sbjct: 17 IPLNFNGNQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L SL E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGSLGEGNKAADW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P ++ RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHITRPKECKKLYFIQLPHSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
+++EN
Sbjct: 197 ELYEN 201
>gi|302683230|ref|XP_003031296.1| hypothetical protein SCHCODRAFT_77075 [Schizophyllum commune H4-8]
gi|300104988|gb|EFI96393.1| hypothetical protein SCHCODRAFT_77075 [Schizophyllum commune H4-8]
Length = 204
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 126/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE VL+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-------LNE-DGGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE ++ GLKR+L +L+ N+ G E DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEVDGLKRRLDERLAPPNASSQFNQAHGAENDWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
>gi|7269405|emb|CAB81365.1| putative protein [Arabidopsis thaliana]
Length = 209
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 127/197 (64%), Gaps = 21/197 (10%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLS+Y FG+KE KD ++ +R+ RMK Y G+RT VE +LLV+ HPH+L
Sbjct: 5 VVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKIKYMKEGMRTSVEGILLVQEHNHPHIL 64
Query: 80 LLQVRNSIFKLPGGRLRPGESDIY---------------GLKRKLTRKLSLNEDGGEVDW 124
LLQ+ N+ KLPGGRL+PGE+ I GLKRKLT KL N DW
Sbjct: 65 LLQIGNTFCKLPGGRLKPGENGIQLPPVWVYYVVSAEADGLKRKLTSKLGGNSAALVPDW 124
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPK------ECTKLFLVKLPVSQKFFVPKNLKL 178
VGEC+ WW+P+FET+++PY PP++ +PK EC +L++V L + F VPKNLKL
Sbjct: 125 TVGECVATWWRPNFETMMYPYCPPHITKPKVVKKHNECKRLYIVHLSEKEYFAVPKNLKL 184
Query: 179 LAVPLCQIHENHKVQFS 195
LAVPL ++++N +V S
Sbjct: 185 LAVPLFELYDNVQVGIS 201
>gi|328861857|gb|EGG10959.1| hypothetical protein MELLADRAFT_59931 [Melampsora larici-populina
98AG31]
Length = 205
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 124/179 (69%), Gaps = 9/179 (5%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V +YPLS+Y F +KEA P +D ++ +R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TVTLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHPHVL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS---------LNEDGGEVDWEVGECL 130
+LQ+ N+ FKLPG LRPGE DI GLK +L +L+ L G+ DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLRPGEDDIEGLKERLDERLAPPPGQFGAGLTSAQGQKDWEIGDCL 123
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P++E+ ++PY P ++ +PKEC L+LV+LP + VPKN+KLLA+PL ++++N
Sbjct: 124 SQWWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELYDN 182
>gi|430812180|emb|CCJ30402.1| unnamed protein product [Pneumocystis jirovecii]
Length = 239
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 124/178 (69%), Gaps = 2/178 (1%)
Query: 14 SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELF 73
++R + IYPLS+Y F +KEA P +D ++ +R+ R+KS+Y+ G+R E +L+V
Sbjct: 13 NERQPETIRIYPLSNYVFSTKEAQPEEDPSVISRLDRLKSHYEKSGMRRTCEGILVVHEH 72
Query: 74 KHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN--EDGGEVDWEVGECLG 131
HPH+L+LQ+ N+ FKLPG L+P ES+I G +L +L+ E + WE+G+CL
Sbjct: 73 NHPHILMLQIANAFFKLPGDYLQPNESEIQGFVARLNERLAPTTPESPEDTKWEIGDCLA 132
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P +V RPKEC KL+LVKLP ++ VPKN+KLLAVPL ++++N
Sbjct: 133 QWWRPNFETFMYPFIPAHVTRPKECKKLYLVKLPKTKVLAVPKNMKLLAVPLFELYDN 190
>gi|302836914|ref|XP_002950017.1| hypothetical protein VOLCADRAFT_59795 [Volvox carteri f.
nagariensis]
gi|300264926|gb|EFJ49120.1| hypothetical protein VOLCADRAFT_59795 [Volvox carteri f.
nagariensis]
Length = 232
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 125/176 (71%)
Query: 14 SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELF 73
S R V ++YP+ +Y FG+K KD + R+ R+K+NY+ G+R EA+LLV+
Sbjct: 2 SSRGQPVFNVYPVGNYSFGTKAPKLEKDSNVNERLSRLKANYEKEGMRRSAEAILLVQEH 61
Query: 74 KHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133
HPH+LL Q+ S F+LPGGRLRPGE ++ GL+RKL+ +L+ +V W+VGE L ++
Sbjct: 62 NHPHVLLFQLGQSFFRLPGGRLRPGEDEVEGLRRKLSNRLAPTNAALQVVWDVGEVLSVF 121
Query: 134 WKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
++P+F+T+ +PY PP++ RPKEC KLF+V+LP F VPKN+KL+AVP+ ++++N
Sbjct: 122 YRPNFDTMFYPYVPPHITRPKECRKLFVVQLPERCVFAVPKNMKLVAVPVFELYDN 177
>gi|281206750|gb|EFA80935.1| NUDIX hydrolase family protein [Polysphondylium pallidum PN500]
Length = 199
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
Query: 29 YYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIF 88
Y FG+KE + KD ++ +R+ RMK N++ GLR VEA+++V HPH+LLL++ N+ F
Sbjct: 11 YSFGTKEPVKEKDSSVVSRLARMKENFEKEGLRKTVEAIIIVHNHNHPHILLLKIANTFF 70
Query: 89 KLPGGRLRPGESDIYGLKRKLTRKLS-LNEDGGEVDWEVGECLGMWWKPDFETLLFPYFP 147
KLPGG+L+PGE++I GL RKLT+KLS + + WEVGE + WW+P+FE +L+PY P
Sbjct: 71 KLPGGKLKPGENEIDGLIRKLTKKLSPIGTSVSDSPWEVGENIATWWRPNFEQILYPYIP 130
Query: 148 PNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
P++ +PKEC KL++V LP F VP NL+L+AVPL +I+ N +
Sbjct: 131 PHITKPKECKKLYVVTLPEKCTFAVPSNLELIAVPLFEIYNNSQ 174
>gi|331223749|ref|XP_003324547.1| autocrine motility factor receptor [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303537|gb|EFP80128.1| autocrine motility factor receptor [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 205
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 124/179 (69%), Gaps = 9/179 (5%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V +YPLS+Y F +KEA P +D ++ +R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TVTLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHPHVL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS---------LNEDGGEVDWEVGECL 130
+LQ+ N+ FKLPG LRPGE D+ GLK +L +L+ L G+ DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLRPGEDDVEGLKERLDDRLAPPAGQFGAGLTSAQGQKDWEIGDCL 123
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P++E+ ++PY P ++ +PKEC L+LV+LP + VPKN+KLLA+PL ++++N
Sbjct: 124 SQWWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELYDN 182
>gi|409041750|gb|EKM51235.1| hypothetical protein PHACADRAFT_263266 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 126/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE VL+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED--------GGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLK++L +L+ +D G + DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPQDSRQFNASHGVDNDWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|393214871|gb|EJD00363.1| cleavage and polyadenylation specific factor 5 [Fomitiporia
mediterranea MF3/22]
Length = 204
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE VL+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVAARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED--------GGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ + G + DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKRRLDERLAPPSESRQFNTTHGIDNDWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
>gi|170111950|ref|XP_001887178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637952|gb|EDR02233.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 205
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 124/179 (69%), Gaps = 9/179 (5%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVD---------WEVGECL 130
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ D + D WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIDGLKRRLDERLAPPADSRQFDQATHGVDNEWEIGDCL 123
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 AQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 182
>gi|367027876|ref|XP_003663222.1| hypothetical protein MYCTH_2304865 [Myceliophthora thermophila ATCC
42464]
gi|347010491|gb|AEO57977.1| hypothetical protein MYCTH_2304865 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 123/185 (66%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y AHG+R E +L
Sbjct: 17 IPLDFNANQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + +I G K +L +L SL E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIEGFKARLDERLAPVGSLGEGNKAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P ++ RPKEC KL+ ++LP ++ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHITRPKECKKLYFIQLPQTKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
+++EN
Sbjct: 197 ELYEN 201
>gi|159480710|ref|XP_001698425.1| hypothetical protein CHLREDRAFT_77351 [Chlamydomonas reinhardtii]
gi|158282165|gb|EDP07918.1| predicted protein [Chlamydomonas reinhardtii]
Length = 199
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 125/170 (73%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V ++YPL++Y FG+K+ KD ++ R+ R++S+Y+ HG+R VEAVL+V+ PH+L
Sbjct: 8 VYNVYPLTNYTFGNKQPKLEKDTSVQERLARLRSSYEQHGMRRSVEAVLVVQEHNTPHVL 67
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGGRLRPGE ++ GL+RKLT L+ + W+VGE LG++++P+F+
Sbjct: 68 LLQLGLNHFKLPGGRLRPGEEEVEGLRRKLTNTLAPANPSLHITWDVGEVLGVFYRPNFD 127
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T+ +PY PP++ RPKE KLF+V+LP F VPKN++L+AVPL +H+N
Sbjct: 128 TVFYPYVPPHITRPKESRKLFVVQLPERCVFAVPKNMRLVAVPLFDLHDN 177
>gi|85089870|ref|XP_958148.1| hypothetical protein NCU09014 [Neurospora crassa OR74A]
gi|28919478|gb|EAA28912.1| hypothetical protein NCU09014 [Neurospora crassa OR74A]
Length = 264
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 125/186 (67%), Gaps = 4/186 (2%)
Query: 8 SVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAV 67
++P+ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y+AHG+R E +
Sbjct: 16 TIPLPFNANQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGI 75
Query: 68 LLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLNEDGGEVD 123
L+ HPH+L+LQ+ N+ FKLPG LRP + +I G K++L +L SL E D
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGD 135
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
W+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 136 WQVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPL 195
Query: 184 CQIHEN 189
++++N
Sbjct: 196 FELYDN 201
>gi|403411800|emb|CCL98500.1| predicted protein [Fibroporia radiculosa]
Length = 204
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED--------GGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ D G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPTDSRQFNSSHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|336470088|gb|EGO58250.1| hypothetical protein NEUTE1DRAFT_82635 [Neurospora tetrasperma FGSC
2508]
gi|350290220|gb|EGZ71434.1| cleavage and polyadenylation specificity factor, 25 kDa subunit
[Neurospora tetrasperma FGSC 2509]
Length = 264
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 125/186 (67%), Gaps = 4/186 (2%)
Query: 8 SVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAV 67
++P+ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y+AHG+R E +
Sbjct: 16 TIPLPFNANQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGI 75
Query: 68 LLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLNEDGGEVD 123
L+ HPH+L+LQ+ N+ FKLPG LRP + +I G K++L +L SL E D
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGD 135
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
W+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 136 WQVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPL 195
Query: 184 CQIHEN 189
++++N
Sbjct: 196 FELYDN 201
>gi|353237909|emb|CCA69870.1| hypothetical protein PIIN_03809 [Piriformospora indica DSM 11827]
Length = 205
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 126/179 (70%), Gaps = 9/179 (5%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPLS++ F +KE+ P +D ++ R+ R+++NY+ +G+R VE VL+V HPH+L
Sbjct: 4 TINLYPLSNFTFSTKESQPEEDPSVAARLQRLQNNYEDYGMRHTVEGVLVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS---------LNEDGGEVDWEVGECL 130
+LQ+ N+ FKLPG L+PGE +I GLK +L +L+ + G + DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEEEIQGLKARLDERLAPTPGTAFQFTEQHGIDNDWEIGDCL 123
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KL+LV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 AQWWRPNFETFMYPFVPAHITKPKECKKLYLVQMPERKVLAVPKNMKLLAIPLFELYDN 182
>gi|336268364|ref|XP_003348947.1| hypothetical protein SMAC_01968 [Sordaria macrospora k-hell]
gi|380094207|emb|CCC08424.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 264
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 124/185 (67%), Gaps = 6/185 (3%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P NG+ + +YPLS+Y FG KE P +D ++ R+ R++ +Y AHG+R E +L
Sbjct: 19 LPFNGNQPEK--IRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYSAHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + +I G K++L +L SL E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|389743616|gb|EIM84800.1| cleavage and polyadenylation specific factor 5 [Stereum hirsutum
FP-91666 SS1]
Length = 204
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 124/178 (69%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KE+ P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKESQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL--------NEDGGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ G + DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPAESRQFNTSHGMDNDWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
>gi|449544756|gb|EMD35728.1| hypothetical protein CERSUDRAFT_115687 [Ceriporiopsis subvermispora
B]
Length = 204
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-------LNEDGG-EVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ N G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKRRLDERLAPPTNSSQFNASHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|367049622|ref|XP_003655190.1| hypothetical protein THITE_2118582 [Thielavia terrestris NRRL 8126]
gi|347002454|gb|AEO68854.1| hypothetical protein THITE_2118582 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P+ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y AHG+R E +L
Sbjct: 17 IPLPFNANQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + +I G K +L +L SL E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDEEIEGFKARLDERLAPVGSLGEGNKAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P ++ RPKEC KL+ ++LP ++ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHITRPKECKKLYFIQLPETKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
+++EN
Sbjct: 197 ELYEN 201
>gi|392559578|gb|EIW52762.1| cleavage and polyadenylation specific factor 5 [Trametes versicolor
FP-101664 SS1]
Length = 204
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED--------GGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLK++L +L+ D G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPTDSKQFNASHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|242217376|ref|XP_002474488.1| predicted protein [Postia placenta Mad-698-R]
gi|220726343|gb|EED80295.1| predicted protein [Postia placenta Mad-698-R]
Length = 204
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 124/178 (69%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVD--------WEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ + + D WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIDGLKRRLDERLAPPTNTQQFDSSHGMGNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|395329711|gb|EJF62097.1| cleavage and polyadenylation specific factor 5 [Dichomitus squalens
LYAD-421 SS1]
Length = 204
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED--------GGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLK++L +L+ D G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPTDSRQFNSSHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|409075896|gb|EKM76271.1| hypothetical protein AGABI1DRAFT_108837 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192977|gb|EKV42912.1| hypothetical protein AGABI2DRAFT_188493 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 126/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ +G+R VE VL+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDYGMRRTVEGVLVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL--------NEDGGEVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLK++L +L+ + G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPSHSQQFDSTHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
>gi|169863260|ref|XP_001838252.1| cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea
okayama7#130]
gi|116500725|gb|EAU83620.1| cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea
okayama7#130]
Length = 204
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 127/178 (71%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-------LNEDGG-EVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLK++L +L+ +++ G + DWE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPSNSQQFDQNHGIDNDWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|320586679|gb|EFW99349.1| cleavage and polyadenylation specific factor 5 [Grosmannia
clavigera kw1407]
Length = 265
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 122/185 (65%), Gaps = 6/185 (3%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P NG+ + +YPLS+Y FG KE P +D ++ R+ R++ +Y HG+R E +L
Sbjct: 19 LPFNGNQPE--TIKLYPLSNYTFGVKETQPEEDPSVVARLRRLEEHYTVHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ L E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDEEVEGFKSRLDERLAPVGRLGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VGECL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QVGECLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|171686284|ref|XP_001908083.1| hypothetical protein [Podospora anserina S mat+]
gi|170943103|emb|CAP68756.1| unnamed protein product [Podospora anserina S mat+]
Length = 276
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
Query: 1 MSDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGL 60
+ E ++P + + + +YPLS+Y FG KE P +D ++ R+ R+ +Y+ HG+
Sbjct: 9 LQSERPPTIPNSFNANQPPTIRLYPLSNYTFGVKETQPEEDPSVIARLERLNDHYEKHGM 68
Query: 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLN 116
R E +L+ HPH+L+LQ+ N+ FKLPG L P + +I G KR+L +L SL
Sbjct: 69 RRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLHPEDDEIEGFKRRLDERLAPVGSLG 128
Query: 117 EDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNL 176
E DWE+G+CL WW+P+ ET ++P+ P ++ RPKEC KL+L++LP ++ VPKN+
Sbjct: 129 EGNKAADWEIGDCLAQWWRPNTETFMYPFVPAHITRPKECKKLYLIQLPETKVLSVPKNM 188
Query: 177 KLLAVPLCQIHEN 189
KLLAVPL ++++N
Sbjct: 189 KLLAVPLFELYDN 201
>gi|390594815|gb|EIN04224.1| cleavage and polyadenylation specific factor 5 [Punctularia
strigosozonata HHB-11173 SS5]
Length = 204
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVAARLQRLQNNYEDWGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-------LNEDGG-EVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ N G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPTNSSQFNASHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|389634023|ref|XP_003714664.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae 70-15]
gi|351646997|gb|EHA54857.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae 70-15]
gi|440474813|gb|ELQ43535.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae Y34]
gi|440487297|gb|ELQ67094.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae P131]
Length = 266
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 124/185 (67%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y+AHG+R E +L
Sbjct: 17 IPLSFNANQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ L E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
++G+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QIGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPNSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|336369060|gb|EGN97402.1| hypothetical protein SERLA73DRAFT_110607 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381841|gb|EGO22992.1| hypothetical protein SERLADRAFT_471586 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-------LNEDGG-EVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ N G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIDGLKRRLDDRLAPPTESRQFNASHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|392588671|gb|EIW78003.1| cleavage and polyadenylation specificity factor 25 kDa subunit
[Coniophora puteana RWD-64-598 SS2]
Length = 204
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L
Sbjct: 4 TIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-------LNEDGG-EVDWEVGECLG 131
+LQ+ N+ FKLPG L+PGE +I GLKR+L +L+ N G + +WE+G+CL
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEIDGLKRRLDDRLAPPPESRQFNASHGVDNEWEIGDCLA 123
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++N
Sbjct: 124 QWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
>gi|429863433|gb|ELA37884.1| cleavage and polyadenylation specific factor 5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 267
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 123/185 (66%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y+ HG+R E +L
Sbjct: 17 IPLSFNSNQPETIRLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYNQHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ + E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPVGRIGEGEEPADW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|402087049|gb|EJT81947.1| cleavage and polyadenylation specificity factor subunit 5
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 266
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 123/187 (65%), Gaps = 7/187 (3%)
Query: 10 PINGSDRNG---YVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEA 66
P+ D NG + +YPLS+Y FG KE P +D ++ R+ R++ +Y AHG+R E
Sbjct: 15 PVIPRDFNGNQPTTIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYSAHGMRRTCEG 74
Query: 67 VLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEV 122
+L+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ L E
Sbjct: 75 ILVCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAG 134
Query: 123 DWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVP 182
DW+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVP
Sbjct: 135 DWQVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPNSKVLSVPKNMKLLAVP 194
Query: 183 LCQIHEN 189
L ++++N
Sbjct: 195 LFELYDN 201
>gi|310798453|gb|EFQ33346.1| cleavage and polyadenylation specificity factor subunit 5
[Glomerella graminicola M1.001]
Length = 269
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P+ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y+ HG+R E +L
Sbjct: 17 IPLAFNSNQPETIRLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYNQHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ + E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPVGRIGEGEEPADW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|380478491|emb|CCF43569.1| cleavage and polyadenylation specificity factor subunit 5
[Colletotrichum higginsianum]
Length = 270
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P+ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y HG+R E +L
Sbjct: 17 IPLAFNSNQPETIRLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYSQHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ + E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPXGRIGEGEEPADW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|443895157|dbj|GAC72503.1| mRNA cleavage factor I subunit [Pseudozyma antarctica T-34]
Length = 210
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 127/187 (67%), Gaps = 17/187 (9%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ ++P++++ F +KEA P +D ++ R+ R+++NY+ G+R VEAVL+V HPH+L
Sbjct: 4 TLTLHPVTAFTFTTKEAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS---------------LNEDGGEVDW 124
+LQ+ N+ FKLPG L+PGE ++ G+K +L +LS N+D G DW
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEVEGMKARLDERLSPVESDPASFGPNGEGRNKDDG--DW 121
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
E+ +CL WW+P+FET ++PY PP+V +PKEC KLFLV +P ++ VPKN+KLLAVPL
Sbjct: 122 EIQDCLAQWWRPNFETFMYPYAPPHVTKPKECKKLFLVTIPPTKVLAVPKNMKLLAVPLF 181
Query: 185 QIHENHK 191
++++N +
Sbjct: 182 ELYDNSQ 188
>gi|388582603|gb|EIM22907.1| cleavage and polyadenylation specificity factor, 25 kDa subunit,
partial [Wallemia sebi CBS 633.66]
Length = 202
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 123/177 (69%), Gaps = 7/177 (3%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
++IYPL +Y F +EA P +D ++ R+ R+++NY+ G+R VE +++V HPH+L
Sbjct: 3 TINIYPLQNYTFTQREAQPEEDASVAARLQRLQNNYEDFGMRRTVEGIMVVHEHGHPHIL 62
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL-------NEDGGEVDWEVGECLGM 132
+LQ+ N+ FKLPG L PGE+D GLK++L +L+ EDG +WE+G+CL
Sbjct: 63 MLQIANAFFKLPGDYLTPGETDEPGLKKRLDDRLAPLDPTMFDPEDGALNEWEIGDCLAQ 122
Query: 133 WWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FET ++P+ P +V +PKEC K+++V LP + F VP+N+KLLA+P+ ++++N
Sbjct: 123 WWRPNFETFMYPFIPAHVTKPKECKKMYVVGLPERKVFAVPRNMKLLAIPVFELYDN 179
>gi|393230751|gb|EJD38352.1| cleavage and polyadenylation specific factor 5 [Auricularia
delicata TFB-10046 SS5]
Length = 206
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 123/181 (67%), Gaps = 8/181 (4%)
Query: 17 NGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
N V +YPLS++ F +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HP
Sbjct: 3 NVNTVLLYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHP 62
Query: 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKL-------TRKLSLNEDGG-EVDWEVGE 128
H+L+LQ+ N+ FKLPG L+PGE + GLK +L T + N G + DWE+G+
Sbjct: 63 HILMLQIANAFFKLPGDYLKPGEDEFEGLKARLDDRLAPPTNSVQFNSSHGIDNDWEIGD 122
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188
CL WW+P+FET ++P+ P ++ +PKEC KLFLV++P + VPKN+KLLA+PL ++++
Sbjct: 123 CLAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYD 182
Query: 189 N 189
N
Sbjct: 183 N 183
>gi|342879665|gb|EGU80905.1| hypothetical protein FOXB_08569 [Fusarium oxysporum Fo5176]
Length = 264
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + V +YPLS+Y FG KE P +D ++ R+ R++ +Y HG+R E +L
Sbjct: 17 IPLSFNGNQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYTEHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + +I G K +L +L+ L E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIQGFKSRLDERLAPVGRLGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKQKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|46125059|ref|XP_387083.1| hypothetical protein FG06907.1 [Gibberella zeae PH-1]
gi|408388256|gb|EKJ67942.1| hypothetical protein FPSE_11753 [Fusarium pseudograminearum CS3096]
Length = 264
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + V +YPLS+Y FG KE P +D ++ R+ R++ +Y HG+R E +L
Sbjct: 17 IPLSFNGNQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYTEHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + +I G K +L +L+ L E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIQGFKSRLDERLAPVGRLGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKQKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|402218179|gb|EJT98257.1| cleavage and polyadenylation specific factor 5 [Dacryopinax sp.
DJM-731 SS1]
Length = 199
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS++ F +KEA P +D ++ R+ R+++NY+ +G+R VE VL+V HPH+L
Sbjct: 4 TIILYPLSNFTFTTKEAQPEEDPSVAARLQRLQNNYEDYGMRRTVEGVLVVHDHGHPHIL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE---DGGEVDWEVGECLGMWWKP 136
+LQ+ N+ FKLPG ++PGE ++ GLK++L +L +WE+G+CL WW+P
Sbjct: 64 MLQIANAFFKLPGDYVKPGEDEVEGLKKRLDVRLEPTSPPYSESTDNWEIGDCLAQWWRP 123
Query: 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+FET ++P+ P +V +PKEC K+FLV+LP + VPKN+KLLAVPL ++++N
Sbjct: 124 NFETFMYPFIPAHVTKPKECKKMFLVQLPEKKVMAVPKNMKLLAVPLFELYDN 176
>gi|358399562|gb|EHK48899.1| hypothetical protein TRIATDRAFT_129286 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
Query: 8 SVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAV 67
++P++ + V +YPLS+Y FG KE P +D ++ R+ R++ ++ HG+R E +
Sbjct: 16 TIPLSFNANQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGI 75
Query: 68 LLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVD 123
L+ HPH+L+LQ+ N+ FKLPG L+P + ++ G K +L +L+ L E D
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKARLDERLAPVGRLGEGEEAGD 135
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVGECL WW+P+FET ++P+ P +V RPKEC K + ++LP S+ VPKN+KLLAVPL
Sbjct: 136 WEVGECLAQWWRPNFETFMYPFVPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPL 195
Query: 184 CQIHEN 189
++++N
Sbjct: 196 FELYDN 201
>gi|340959576|gb|EGS20757.1| hypothetical protein CTHT_0025930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 266
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 121/184 (65%), Gaps = 4/184 (2%)
Query: 10 PINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLL 69
P+ + R + +YPLS+Y FG KE P +D ++ R+ R++ +Y +G+R E VL+
Sbjct: 18 PLPFNARQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQQYGMRRTCEGVLV 77
Query: 70 VELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL----SLNEDGGEVDWE 125
HPH+L+LQ+ N+ FKLPG LRP + +I G K +L +L SL E DW+
Sbjct: 78 CHEHNHPHILMLQIANAFFKLPGDYLRPDDDEIEGFKARLDERLAPVGSLGEGNKAGDWQ 137
Query: 126 VGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQ 185
+G+CL WW+P+FET ++P+ P ++ RPKEC KL+ ++LP ++ VPKN+KLLAVPL +
Sbjct: 138 IGDCLAQWWRPNFETFMYPFVPAHITRPKECKKLYFIQLPETKVLSVPKNMKLLAVPLFE 197
Query: 186 IHEN 189
+++N
Sbjct: 198 LYDN 201
>gi|328875182|gb|EGG23547.1| NUDIX hydrolase family protein [Dictyostelium fasciculatum]
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 115/167 (68%), Gaps = 2/167 (1%)
Query: 27 SSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS 86
+SY FG KE + KD T+ R+ RMK +D G R VE++++V HPH+LLLQ+ NS
Sbjct: 11 TSYSFGIKEPVAEKDATVAQRLTRMKETFDKEGTRKTVESIIIVHEHNHPHILLLQMSNS 70
Query: 87 IFKLPGGRLRPGESDIYGLKRKLTRKLS-LNEDGGEVDWEVGECLGMWWKPDFETLLF-P 144
FKLPGG+L+PGE+++ GL RKLT+KLS + + WE+GE + WW+P FE F P
Sbjct: 71 YFKLPGGKLKPGENEVDGLIRKLTKKLSPIGTAPDDSPWEIGELVSTWWRPSFEQHTFYP 130
Query: 145 YFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
Y PP++ +PKEC KL++V LP F VP+NLKL+AVPL +++ N +
Sbjct: 131 YIPPHISKPKECKKLYVVTLPEKCTFAVPQNLKLIAVPLFELYNNQQ 177
>gi|449298073|gb|EMC94090.1| hypothetical protein BAUCODRAFT_567664 [Baudoinia compniacensis
UAMH 10762]
Length = 262
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 7 ASVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEA 66
S+P + +R V +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R EA
Sbjct: 17 TSLPFD--ERQAPAVRLYPLSNYTFGTKEGQPEEDPSVKERLRRLEEHYEQHGMRRTCEA 74
Query: 67 VLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKL--------TRKLSLNED 118
VL+ HPH+L+LQ+ N+ FKLPG + +I G K +L T LS +
Sbjct: 75 VLVCHEHNHPHVLMLQIANAFFKLPGDYIPHSSDEIEGFKARLNERLAPPPTSSLSTRDT 134
Query: 119 GGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKL 178
E DW V + L +WW+P+FET ++PY P +V RPKEC KL+L++LP S+ VPKN+KL
Sbjct: 135 PAEADWNVTDTLAVWWRPNFETFMYPYLPAHVTRPKECKKLYLIQLPKSKVLSVPKNMKL 194
Query: 179 LAVPLCQIHEN 189
LAVPL ++++N
Sbjct: 195 LAVPLFELYDN 205
>gi|440636758|gb|ELR06677.1| hypothetical protein GMDG_00294 [Geomyces destructans 20631-21]
Length = 269
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 123/186 (66%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E +L
Sbjct: 17 LPLSFNGNQSETIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYELHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L+P + +I G K +L +L+ + +G D
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEIEGFKARLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRQKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|400599110|gb|EJP66814.1| cleavage and polyadenylation specificity factor subunit 5
[Beauveria bassiana ARSEF 2860]
Length = 265
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 117/173 (67%), Gaps = 4/173 (2%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
V +YP S+Y FG KE P +D ++ R+ R++ ++ HG+R E +L+ PH+L+
Sbjct: 29 VRVYPFSNYTFGVKETQPEEDPSVIARLKRLEEHFAEHGMRRTCEGILVCHEHNQPHILM 88
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDWEVGECLGMWWKP 136
LQ+ N+ FKLPG LRP + +I G K +L +L+ L ED + +WE+GECL WW+P
Sbjct: 89 LQIANAFFKLPGDYLRPEDGEIQGFKTRLDERLAPVGRLGEDEKDGEWEIGECLSQWWRP 148
Query: 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+FET ++P+ P +V RPKEC K++L+ LP ++ VPKN+KLLAVPL +++EN
Sbjct: 149 NFETFMYPFVPAHVTRPKECKKIYLIHLPKNKVLSVPKNMKLLAVPLFELYEN 201
>gi|119182817|ref|XP_001242516.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392865416|gb|EAS31200.2| cleavage and polyadenylation specific factor 5 [Coccidioides
immitis RS]
Length = 277
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 123/186 (66%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + SDR + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 IPKSFSDRQPATIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L+ + ++ G K +L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLKHTDDEVDGFKARLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|340522024|gb|EGR52257.1| predicted protein [Trichoderma reesei QM6a]
Length = 264
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P+ + + V +YPLS+Y FG KE P +D ++ R+ R++ +++ HG+R E +L
Sbjct: 17 IPLPFNAKQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFNEHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ L E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
EVGECL +W+P+FET ++P+ P +V RPKEC K + ++LP S+ VPKN+KLLAVPL
Sbjct: 137 EVGECLAQFWRPNFETFMYPFIPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|322707058|gb|EFY98637.1| cleavage and polyadenylation specific factor 5 [Metarhizium
anisopliae ARSEF 23]
Length = 264
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + + V +YPLS+Y FG KE P +D ++ R+ R++ ++ HG+R E +L
Sbjct: 17 IPLDFNSKQPDKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + + G K +L +L+ + E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEEAGFKARLDERLAPVGRIGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
EVG+CL WW+P+FET ++P+ P +V RPKEC KL+ + LP ++ VPKN+KLLAVPL
Sbjct: 137 EVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIHLPKTKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|322698980|gb|EFY90745.1| cleavage and polyadenylation specific factor 5 [Metarhizium acridum
CQMa 102]
Length = 264
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + + V +YPLS+Y FG KE P +D ++ R+ R++ ++ HG+R E +L
Sbjct: 17 IPLDFNSKQPDKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFAEHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + + G K +L +L+ + E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEEAGFKARLDERLAPVGRIGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
EVG+CL WW+P+FET ++P+ P +V RPKEC KL+ + LP ++ VPKN+KLLAVPL
Sbjct: 137 EVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIHLPKTKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|358058565|dbj|GAA95528.1| hypothetical protein E5Q_02183 [Mixia osmundae IAM 14324]
Length = 197
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 119/172 (69%), Gaps = 3/172 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ ++PLS+Y F +K++ P +D ++ R+ R+++ Y+ G+R E +L+V HPH+L
Sbjct: 4 TLTLFPLSNYTFSTKDSQPEEDPSVAARLQRLQNQYEDFGMRRTAEGILVVHEHGHPHVL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG--GEVDWEVGECLGMWWKPD 137
+LQ+ N+ FKLPG LRPGE D GLKR+L+ +L E GE DWE+G+CL WW+P+
Sbjct: 64 MLQIANAFFKLPGDYLRPGEDDAEGLKRRLSERLDPVEGSRPGE-DWEIGDCLAQWWRPN 122
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
FE+ ++PY P +V +PKEC +LV++P + VPKN KLLA+PL ++++N
Sbjct: 123 FESFMYPYIPAHVTKPKECKSFYLVQMPPRKVLCVPKNFKLLAIPLFELYDN 174
>gi|169771819|ref|XP_001820379.1| cleavage and polyadenylation specificity factor subunit 5
[Aspergillus oryzae RIB40]
gi|238485582|ref|XP_002374029.1| cleavage and polyadenylation specific factor 5 [Aspergillus flavus
NRRL3357]
gi|83768238|dbj|BAE58377.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698908|gb|EED55247.1| cleavage and polyadenylation specific factor 5 [Aspergillus flavus
NRRL3357]
gi|391874667|gb|EIT83512.1| mRNA cleavage factor I subunit [Aspergillus oryzae 3.042]
Length = 275
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +YD HG+R E VL
Sbjct: 17 IPKDFSAQQPQTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDQHGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K++L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|358387117|gb|EHK24712.1| hypothetical protein TRIVIDRAFT_30132 [Trichoderma virens Gv29-8]
Length = 264
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P+ + + V +YPLS+Y FG KE P +D ++ R+ R++ ++ HG+R E +L
Sbjct: 17 IPLPFNAKQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + ++ G K +L +L+ L E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
EVGECL +W+P+FET ++P+ P +V RPKEC K + ++LP S+ VPKN+KLLAVPL
Sbjct: 137 EVGECLAQFWRPNFETFMYPFIPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|303319441|ref|XP_003069720.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109406|gb|EER27575.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320040829|gb|EFW22762.1| cleavage and polyadenylation specific factor 5 [Coccidioides
posadasii str. Silveira]
Length = 277
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 123/186 (66%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + SDR + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 IPKSFSDRQPATIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L+ + ++ G K +L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLKHTDDEVDGFKARLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|145251974|ref|XP_001397500.1| cleavage and polyadenylation specificity factor subunit 5
[Aspergillus niger CBS 513.88]
gi|134083042|emb|CAK42804.1| unnamed protein product [Aspergillus niger]
gi|350633409|gb|EHA21774.1| hypothetical protein ASPNIDRAFT_183952 [Aspergillus niger ATCC
1015]
Length = 277
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +YD HG+R E VL
Sbjct: 17 IPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDLHGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K++L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|302410621|ref|XP_003003144.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium albo-atrum VaMs.102]
gi|261358168|gb|EEY20596.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium albo-atrum VaMs.102]
Length = 268
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 125/192 (65%), Gaps = 6/192 (3%)
Query: 4 EMGAS--VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLR 61
E G S +P++ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y +G+R
Sbjct: 10 ESGQSPVIPLSFNANQPSTIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYTQYGMR 69
Query: 62 TCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNE 117
E +L+ HPH+L+LQ+ N+ FKLPG LRP + + G K +L +L+ + E
Sbjct: 70 RTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLRPEDDESEGFKARLDERLAPVGRIGE 129
Query: 118 DGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLK 177
+ DW++G+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+K
Sbjct: 130 GEEKGDWQLGDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMK 189
Query: 178 LLAVPLCQIHEN 189
LLAVPL ++++N
Sbjct: 190 LLAVPLFELYDN 201
>gi|358368193|dbj|GAA84810.1| cleavage and polyadenylation specific factor 5 [Aspergillus
kawachii IFO 4308]
Length = 277
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +YD HG+R E VL
Sbjct: 17 IPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDLHGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K++L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLNFEDDEVEGFKKRLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|328771011|gb|EGF81052.1| hypothetical protein BATDEDRAFT_88168 [Batrachochytrium
dendrobatidis JAM81]
Length = 202
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 121/172 (70%), Gaps = 2/172 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V +YPLS + FG+K+ D+T+ ++ R++S ++ G+RT VE VLLV HPH+L
Sbjct: 8 TVSLYPLSGFSFGAKDPQMEDDQTMSAKLNRLQSEFEIQGMRTSVEGVLLVHEHGHPHIL 67
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL--NEDGGEVDWEVGECLGMWWKPD 137
+LQV NS + LPGG L+PGE +I GLK ++ +KL+ ++ E D++VGE +G+WW+P
Sbjct: 68 MLQVANSYYSLPGGILKPGEDEIEGLKLRINQKLAPIGHDQTSESDFDVGELIGVWWRPS 127
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
E++++PY P ++ RPKE K++L+ LP + VPKN+KLLAVPL ++++N
Sbjct: 128 IESIMYPYVPAHISRPKEMRKVYLIHLPEKKLLSVPKNMKLLAVPLFELYDN 179
>gi|70985266|ref|XP_748139.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus Af293]
gi|66845767|gb|EAL86101.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus Af293]
gi|159125937|gb|EDP51053.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus A1163]
Length = 334
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E VL
Sbjct: 73 IPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVL 132
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K++L +L+ + +G D
Sbjct: 133 VCHEHNHPHVLMLQIANAFFKLPGDYLHFDDDEVEGFKKRLNERLAPVGSQFSGEGVNED 192
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 193 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 252
Query: 184 CQIHEN 189
++++N
Sbjct: 253 FELYDN 258
>gi|346971150|gb|EGY14602.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium dahliae VdLs.17]
Length = 268
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + + +YPLS+Y FG KE P +D ++ R+ R++ +Y +G+R E +L
Sbjct: 17 IPLSFNANQPSTIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYTQYGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG LRP + + G K +L +L+ + E + DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLRPEDDESEGFKARLDERLAPVGRIGEGEEKGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
++G+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 QLGDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|302915883|ref|XP_003051752.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732691|gb|EEU46039.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 264
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P++ + V +YPLS+Y FG KE +D ++ R+ R++ +Y HG+R E +L
Sbjct: 17 IPLSFNGHQPEKVTLYPLSNYTFGVKETQLEEDPSVIARLKRLEEHYTEHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS----LNEDGGEVDW 124
+ HPH+L+LQ+ N+ FKLPG L+P + +I G K +L +L+ L E DW
Sbjct: 77 VCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEIEGFKSRLDERLAPVGRLGEGEEAGDW 136
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
+VG+CL WW+P+FET ++P+ P +V RPKEC KL+ ++LP ++ VPKN+KLLAVPL
Sbjct: 137 QVGDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKTKVLSVPKNMKLLAVPLF 196
Query: 185 QIHEN 189
++++N
Sbjct: 197 ELYDN 201
>gi|242770229|ref|XP_002341936.1| cleavage and polyadenylation specific factor 5 [Talaromyces
stipitatus ATCC 10500]
gi|218725132|gb|EED24549.1| cleavage and polyadenylation specific factor 5 [Talaromyces
stipitatus ATCC 10500]
Length = 277
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E VL+ HPH+L
Sbjct: 28 TIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHVL 87
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG L + +I G K +L +L+ +G DWEVG+ L WW
Sbjct: 88 MLQIANAFFKLPGDYLHHDDDEITGFKTRLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 147
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+L++LP + VPKN+KLLAVPL ++++N
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYLIQLPKKKVLSVPKNMKLLAVPLFELYDN 202
>gi|119499145|ref|XP_001266330.1| cleavage and polyadenylation specific factor 5 [Neosartorya
fischeri NRRL 181]
gi|119414494|gb|EAW24433.1| cleavage and polyadenylation specific factor 5 [Neosartorya
fischeri NRRL 181]
Length = 278
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E VL
Sbjct: 17 IPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K++L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|345569784|gb|EGX52610.1| hypothetical protein AOL_s00007g393 [Arthrobotrys oligospora ATCC
24927]
Length = 276
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 121/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E +L
Sbjct: 19 IPPDFSANQPKTIRLYPLSNYTFGTKENQPEEDPSVLARLQRLQEHYEKHGMRRTCEGIL 78
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L+P E +I G K +L +L+ + +G +
Sbjct: 79 VCHEHCHPHILMLQIANAFFKLPGDYLQPEEDEISGFKARLNERLAPVGNQFSGEGVNDE 138
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET L+P+ P +V RPKE KL+ + LP S+ VPKN+KLLAVPL
Sbjct: 139 WEIGDTLAQWWRPNFETFLYPFIPAHVTRPKEVKKLYFIHLPRSKVLSVPKNMKLLAVPL 198
Query: 184 CQIHEN 189
++++N
Sbjct: 199 FELYDN 204
>gi|121719266|ref|XP_001276338.1| cleavage and polyadenylation specific factor 5 [Aspergillus
clavatus NRRL 1]
gi|119404536|gb|EAW14912.1| cleavage and polyadenylation specific factor 5 [Aspergillus
clavatus NRRL 1]
Length = 278
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 121/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E VL
Sbjct: 17 APKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K++L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|406868246|gb|EKD21283.1| putative cleavage and polyadenylation specificity factor subunit 5
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 264
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 122/188 (64%), Gaps = 8/188 (4%)
Query: 10 PINGSDRNGY---VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEA 66
PI D NG + ++PLS+Y FG+KE P +D ++ R+ R++ +YD HG+R E
Sbjct: 15 PILPKDFNGNQPKTIRLFPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDVHGMRRTCEG 74
Query: 67 VLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGE 121
+L+ HPH+L+LQ+ N+ FKLPG L+ + +I G K +L +L+ + +G
Sbjct: 75 ILVCHEHNHPHILMLQIANAFFKLPGDYLKEDDDEIEGFKMRLNERLAPVGTQFSGEGVN 134
Query: 122 VDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAV 181
+WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAV
Sbjct: 135 EEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRQKVLSVPKNMKLLAV 194
Query: 182 PLCQIHEN 189
PL ++++N
Sbjct: 195 PLFELYDN 202
>gi|212541905|ref|XP_002151107.1| cleavage and polyadenylation specific factor 5 [Talaromyces
marneffei ATCC 18224]
gi|210066014|gb|EEA20107.1| cleavage and polyadenylation specific factor 5 [Talaromyces
marneffei ATCC 18224]
Length = 282
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 117/175 (66%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+KE P +D ++ R+ R++ +YD +G+R E VL+ HPH+L
Sbjct: 28 TIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYDLYGMRRTCEGVLVCHEHNHPHVL 87
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG L + +I G K +L +L+ + +G DWEVG+ L WW
Sbjct: 88 MLQIANAFFKLPGDYLHHDDDEIAGFKTRLNERLAPVGSQFSGEGVNEDWEVGDTLAQWW 147
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+L++LP + VPKN+KLLAVPL ++++N
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYLIQLPKKKVLSVPKNMKLLAVPLFELYDN 202
>gi|452982522|gb|EME82281.1| hypothetical protein MYCFIDRAFT_40599 [Pseudocercospora fijiensis
CIRAD86]
Length = 274
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 125/194 (64%), Gaps = 9/194 (4%)
Query: 7 ASVPING----SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRT 62
+SVP ++R + +YPLS+Y FG+KE P +D ++ +R+ R++ +Y+ HG+R
Sbjct: 11 SSVPAKAILPFNERQQPTIRLYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYEKHGMRR 70
Query: 63 CVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN-----E 117
E +L+ HPH+L+LQ+ N+ FKLPG L+ +I G K +L +L+
Sbjct: 71 TCEGILVCHEHNHPHVLMLQIANAFFKLPGDYLQHDVDEIEGFKARLNERLAPTGSLGAS 130
Query: 118 DGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLK 177
+ + DW+V + L W++P+FET ++P+ PP+V RPKEC KL+ ++LP ++ VPKN+K
Sbjct: 131 EAADSDWDVADTLAQWYRPNFETFMYPFLPPHVTRPKECKKLYFIRLPKAKVLSVPKNMK 190
Query: 178 LLAVPLCQIHENHK 191
LLAVPL ++++N +
Sbjct: 191 LLAVPLFELYDNSQ 204
>gi|156048430|ref|XP_001590182.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154693343|gb|EDN93081.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 271
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 118/175 (67%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+KE P +D ++ R+ R++ +Y HG+R E +L+ HPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYVEHGMRRTCEGILVCHEHNHPHIL 87
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG L+P + ++ G K++L +L+ + +G +WE+G+ L WW
Sbjct: 88 MLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQFSGEGVNEEWEIGDTLAQWW 147
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++N
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPKNMKLLAVPLFELYDN 202
>gi|346324790|gb|EGX94387.1| cleavage and polyadenylation specific factor 5 [Cordyceps militaris
CM01]
Length = 266
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 7/196 (3%)
Query: 1 MSDEMGASVPINGSDRNGY---VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDA 57
+ D S P+ D NG + +YP S+Y FG KE P +D ++ R+ R++ +Y
Sbjct: 6 VDDTQSGSPPVLPLDFNGNQPPTIRVYPSSNYTFGVKETQPEEDPSVIARLRRLEEHYAE 65
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS--- 114
HG+R E +L+ H H+L+LQ+ N+ FKLPG LRP + + G K +L +L+
Sbjct: 66 HGMRRTCEGILVCHEHNHAHILMLQIANAFFKLPGDYLRPEDDENDGFKVRLDERLAPVG 125
Query: 115 -LNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP 173
L D +WE+G+CL WW+P+FET ++P+ P ++ RPKEC K++L+ LP ++ VP
Sbjct: 126 RLGADEKPGEWEIGDCLSQWWRPNFETFMYPFLPAHITRPKECKKIYLIHLPKTKVLSVP 185
Query: 174 KNLKLLAVPLCQIHEN 189
KN+KLLAVPL +++EN
Sbjct: 186 KNMKLLAVPLFELYEN 201
>gi|169616107|ref|XP_001801469.1| hypothetical protein SNOG_11226 [Phaeosphaeria nodorum SN15]
gi|111060605|gb|EAT81725.1| hypothetical protein SNOG_11226 [Phaeosphaeria nodorum SN15]
Length = 261
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+K+ P +D ++ R+ R++ +Y HG+R E +L+ HPH+L
Sbjct: 17 TIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYQEHGMRRTCEGILVCHEHNHPHIL 76
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG LR + +I G K +L +L+ +G +W+VG+ L WW
Sbjct: 77 MLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVNDEWQVGDTLAQWW 136
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL ++++N
Sbjct: 137 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDN 191
>gi|347841328|emb|CCD55900.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 118/175 (67%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ ++PLS+Y FG+KE P +D ++ R+ R++ +Y HG+R E +L+ HPH+L
Sbjct: 80 TIRLFPLSNYTFGTKETQPEEDPSVLARLKRLEEHYVEHGMRRTCEGILVCHEHNHPHIL 139
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG L+P + ++ G K++L +L+ + +G +WE+G+ L WW
Sbjct: 140 MLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQFSGEGVNEEWEIGDTLAQWW 199
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++N
Sbjct: 200 RPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPKNMKLLAVPLFELYDN 254
>gi|296410690|ref|XP_002835068.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627843|emb|CAZ79189.1| unnamed protein product [Tuber melanosporum]
Length = 261
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E +L
Sbjct: 17 LPASFSANQPKTIRLYPLSNYTFGTKENQPEEDPSVLARLQRLQEHYEQYGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L ES++ G K +L +L+ + +G +
Sbjct: 77 VCHEHCHPHILMLQIANAFFKLPGDYLHHHESELEGFKSRLNERLAPVGSQFSGEGVNDE 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|384247444|gb|EIE20931.1| cleavage and polyadenylation specificity factor, 25 kDa subunit
[Coccomyxa subellipsoidea C-169]
Length = 223
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 110/170 (64%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ IYP+++Y FGSK A KD + R+ R + Y G+R V+AVLLV HPH+L
Sbjct: 7 AITIYPVANYNFGSKAAKTEKDTNVQARLSRWEEKYKKEGVRRSVDAVLLVWEHNHPHVL 66
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ S FKLPGGRLRPGE + GL+RKL LS W++G+C+ +W+P+F+
Sbjct: 67 LLQLGTSFFKLPGGRLRPGEDEKMGLRRKLENNLSPEAASLAHPWDIGQCIATYWRPNFD 126
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
L+PY P ++ RPKE KL+L+ LP VP+N KL+AVPL +++EN
Sbjct: 127 MTLYPYLPAHITRPKEVKKLYLISLPEKCYLAVPRNAKLIAVPLFELYEN 176
>gi|398393918|ref|XP_003850418.1| hypothetical protein MYCGRDRAFT_74666 [Zymoseptoria tritici IPO323]
gi|339470296|gb|EGP85394.1| hypothetical protein MYCGRDRAFT_74666 [Zymoseptoria tritici IPO323]
Length = 274
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 119/181 (65%), Gaps = 5/181 (2%)
Query: 14 SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELF 73
++R + +YPLS+Y FG+KE P +D ++ +R+ R++ +YD HG+R E +L+
Sbjct: 22 NERQQPTIRLYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYDKHGMRRTCEGILVCHEH 81
Query: 74 KHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE-----DGGEVDWEVGE 128
HPH+L+LQ+ N+ FKLPG L +I G K +L +L+ + + DW+V +
Sbjct: 82 NHPHILMLQIANAFFKLPGDYLPHDVDEIEGFKTRLNERLAPTGSLSTVEAADSDWDVAD 141
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188
L W++P+FET ++P+ PP+V RPKEC KL+ ++LP ++ VPKN+KLLAVPL ++++
Sbjct: 142 TLAQWYRPNFETFMYPFLPPHVTRPKECKKLYFIQLPRAKVLSVPKNMKLLAVPLFELYD 201
Query: 189 N 189
N
Sbjct: 202 N 202
>gi|327301289|ref|XP_003235337.1| cleavage and polyadenylation specific factor 5 [Trichophyton rubrum
CBS 118892]
gi|326462689|gb|EGD88142.1| cleavage and polyadenylation specific factor 5 [Trichophyton rubrum
CBS 118892]
Length = 274
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 IPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L+ + +I G K +L +L+ +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|343427607|emb|CBQ71134.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 203
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 123/187 (65%), Gaps = 24/187 (12%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ ++P++++ F +KEA P +D ++ R+ R+++NY+ G+R VEAVL+V +HPH+L
Sbjct: 4 TLTLHPVTAFTFTTKEAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHRHPHVL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL---------------SLNEDGGEVDW 124
+LQ+ N+ FKLPG L+PGE ++ G+K +L +L N+D G DW
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDNG--DW 121
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
E+ +CL WW+P+FET ++PY PP+V +PKEC KLFLV VPKN+KLLAVPL
Sbjct: 122 EIQDCLAQWWRPNFETFMYPYAPPHVTKPKECKKLFLV-------LAVPKNMKLLAVPLF 174
Query: 185 QIHENHK 191
++++N +
Sbjct: 175 ELYDNSQ 181
>gi|315049019|ref|XP_003173884.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma gypseum CBS 118893]
gi|311341851|gb|EFR01054.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma gypseum CBS 118893]
Length = 274
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 IPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L+ + +I G K +L +L+ +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|451853881|gb|EMD67174.1| hypothetical protein COCSADRAFT_82596 [Cochliobolus sativus ND90Pr]
gi|451993650|gb|EMD86122.1| hypothetical protein COCHEDRAFT_1146579 [Cochliobolus
heterostrophus C5]
gi|451999796|gb|EMD92258.1| hypothetical protein COCHEDRAFT_1224116 [Cochliobolus
heterostrophus C5]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 120/188 (63%), Gaps = 8/188 (4%)
Query: 10 PINGSDRNGY---VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEA 66
P+ D NG + +YPLS+Y FG+K+ P +D ++ R+ R++ +Y HG+R E
Sbjct: 15 PVIPKDFNGNQPKTIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYSEHGMRRTCEG 74
Query: 67 VLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGE 121
+L+ HPH+L+LQ+ N+ FKLPG LR + +I G K +L +L+ +G
Sbjct: 75 ILVCHEHNHPHILMLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVN 134
Query: 122 VDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAV 181
+W VG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAV
Sbjct: 135 DEWVVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAV 194
Query: 182 PLCQIHEN 189
PL ++++N
Sbjct: 195 PLFELYDN 202
>gi|302667099|ref|XP_003025141.1| hypothetical protein TRV_00666 [Trichophyton verrucosum HKI 0517]
gi|291189229|gb|EFE44530.1| hypothetical protein TRV_00666 [Trichophyton verrucosum HKI 0517]
Length = 272
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 15 IPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 74
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L+ + +I G K +L +L+ +G D
Sbjct: 75 VCHEHNHPHVLMLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNED 134
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 135 WEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPL 194
Query: 184 CQIHEN 189
++++N
Sbjct: 195 FELYDN 200
>gi|255955443|ref|XP_002568474.1| Pc21g14600 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590185|emb|CAP96357.1| Pc21g14600 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 278
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 119/186 (63%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
VP + + + V +YPLS+Y FG+KE P +D ++ R+ R++ Y HG+R E +L
Sbjct: 17 VPKDFTAQQPETVRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEQYRLHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + +I G K++L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHHEDDEIEGFKKRLNERLAPVGSQFSGEGVNDD 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+ + L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEISDTLAQWWRPNFETFMYPFLPAHVTRPKECKKLYFIRLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|327287824|ref|XP_003228628.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Anolis carolinensis]
Length = 227
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R LRM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFLRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|324508134|gb|ADY43438.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 229
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 116/179 (64%), Gaps = 5/179 (2%)
Query: 12 NGS-DRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV 70
NGS DR + +YPL+SY FG+KE +D ++ R RM+ Y+ G+R VE VLLV
Sbjct: 31 NGSTDR---AISLYPLTSYTFGTKEPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLV 87
Query: 71 ELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECL 130
PH+LLLQ+ + FKLPGG L PGE +I GLKR LT L +DG + W + + +
Sbjct: 88 HEHSLPHVLLLQIGTTFFKLPGGELNPGEDEIDGLKRLLTETLG-RQDGTKDLWTIEDAI 146
Query: 131 GMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
G WW+P+F+ +PY P +V +PKE TKLFLV+LP F VPKN KL+A PL ++++N
Sbjct: 147 GNWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDN 205
>gi|296817503|ref|XP_002849088.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma otae CBS 113480]
gi|238839541|gb|EEQ29203.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma otae CBS 113480]
Length = 275
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL+ HPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 87
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG L+ + +I G K +L +L+ +G DWEVG+ L WW
Sbjct: 88 MLQIANAFFKLPGDYLQHSDDEIEGFKSRLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 147
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++N
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDN 202
>gi|396492444|ref|XP_003843800.1| similar to cleavage and polyadenylation specificity factor subunit
5 [Leptosphaeria maculans JN3]
gi|312220380|emb|CBY00321.1| similar to cleavage and polyadenylation specificity factor subunit
5 [Leptosphaeria maculans JN3]
Length = 272
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+K+ P +D ++ R+ R++ +Y +G+R E +L+ HPH+L
Sbjct: 28 TIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYTEYGMRRTCEGILVCHEHNHPHIL 87
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG LR + +I G K +L +L+ +G +W+VG+ L WW
Sbjct: 88 MLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVNDEWQVGDTLAQWW 147
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL ++++N
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDN 202
>gi|261202886|ref|XP_002628657.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis SLH14081]
gi|239590754|gb|EEQ73335.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis SLH14081]
gi|239612473|gb|EEQ89460.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis ER-3]
gi|327350559|gb|EGE79416.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 286
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 LPHGFSAKQPATIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K +L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDD 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|378726618|gb|EHY53077.1| autocrine motility factor receptor [Exophiala dermatitidis
NIH/UT8656]
Length = 287
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E +L+ HPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVAARLKRLEEHYEKYGMRRTCEGILVCHEHNHPHVL 87
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-LNEDGGEVDWEVGECLGMWWKPDF 138
+LQ+ N+ FKLPG L +I G K +L +L+ N G+ +WE+G+CL WW+P+
Sbjct: 88 MLQIANAFFKLPGDYLPHDADEIEGFKMRLNERLAPTNPKEGDTEWEIGDCLAQWWRPNH 147
Query: 139 ETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
ET L+P+ P +V RPKE KL+L+ LP ++ VPKN+KLLAVPL ++++N
Sbjct: 148 ETFLYPFLPAHVSRPKELKKLYLIHLPPNKVLSVPKNMKLLAVPLFELYDN 198
>gi|325093550|gb|EGC46860.1| cleavage and polyadenylation specific subunit [Ajellomyces
capsulatus H88]
Length = 285
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 LPQGFSAKQPPTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K +L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDD 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|154284992|ref|XP_001543291.1| hypothetical protein HCAG_00337 [Ajellomyces capsulatus NAm1]
gi|150406932|gb|EDN02473.1| hypothetical protein HCAG_00337 [Ajellomyces capsulatus NAm1]
Length = 285
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 LPQGFSAKQPPTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K +L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDD 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|197128966|gb|ACH45464.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 233
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|453084000|gb|EMF12045.1| pre-mRNA cleavage factor I 25 kDa subunit, partial [Mycosphaerella
populorum SO2202]
Length = 259
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 116/175 (66%), Gaps = 6/175 (3%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YPLS+Y FG+KE P +D ++ +R+ R++ +Y+ HG+R E +L+ HPH+L+LQ
Sbjct: 30 LYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYEKHGMRRTCEGILVCHEHNHPHVLMLQ 89
Query: 83 VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV------DWEVGECLGMWWKP 136
+ N+ FKLPG LR +I G K +L +L+ G+ DW + + L W++P
Sbjct: 90 IANAFFKLPGDYLRHDVDEIEGFKERLNERLAPTGSLGDSATAADRDWNIADTLAQWYRP 149
Query: 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+FET ++P+ PP+V RPKEC KL+L++LP + VPKN+KLLAVPL ++++N +
Sbjct: 150 NFETFMYPFLPPHVTRPKECKKLYLIQLPEGKVLSVPKNMKLLAVPLFELYDNSQ 204
>gi|47230369|emb|CAF99562.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFE 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 206
>gi|345319194|ref|XP_001520801.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Ornithorhynchus anatinus]
Length = 208
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 17 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 76
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 77 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 135
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 136 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 185
>gi|449282555|gb|EMC89388.1| Cleavage and polyadenylation specificity factor subunit 5, partial
[Columba livia]
Length = 206
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|62859619|ref|NP_001017262.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
gi|89267892|emb|CAJ83328.1| cleavage and polyadenylation specific factor 5 [Xenopus (Silurana)
tropicalis]
gi|161612284|gb|AAI55975.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
gi|165971084|gb|AAI58238.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
Length = 227
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|410913111|ref|XP_003970032.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Takifugu rubripes]
Length = 229
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFE 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 206
>gi|330948046|ref|XP_003307047.1| hypothetical protein PTT_20368 [Pyrenophora teres f. teres 0-1]
gi|311315165|gb|EFQ84874.1| hypothetical protein PTT_20368 [Pyrenophora teres f. teres 0-1]
Length = 275
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 120/188 (63%), Gaps = 8/188 (4%)
Query: 10 PINGSDRNGY---VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEA 66
P+ D NG + ++PLS+Y FG+K+ P +D ++ R+ R++ +Y HG+R E
Sbjct: 15 PVIPKDFNGNQPKTIRLFPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEG 74
Query: 67 VLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGE 121
+L+ HPH+L+LQ+ N+ FKLPG LR + ++ G K +L +L+ +G
Sbjct: 75 ILVCHEHNHPHILMLQIANAFFKLPGDYLRAEDDEVEGFKARLNERLAPVGTQFTGEGVN 134
Query: 122 VDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAV 181
+W VG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAV
Sbjct: 135 DEWVVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAV 194
Query: 182 PLCQIHEN 189
PL ++++N
Sbjct: 195 PLFELYDN 202
>gi|350539753|ref|NP_001232732.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|363738015|ref|XP_003641943.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Gallus gallus]
gi|197128967|gb|ACH45465.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128968|gb|ACH45466.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128969|gb|ACH45467.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128971|gb|ACH45469.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 227
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|148235158|ref|NP_001086401.1| cleavage and polyadenylation specificity factor subunit 5 [Xenopus
laevis]
gi|82183583|sp|Q6DJE4.1|CPSF5_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|49522181|gb|AAH75235.1| MGC84447 protein [Xenopus laevis]
Length = 227
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|348509546|ref|XP_003442309.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oreochromis niloticus]
Length = 227
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|432852419|ref|XP_004067238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oryzias latipes]
Length = 229
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDGSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFE 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 206
>gi|307107193|gb|EFN55436.1| hypothetical protein CHLNCDRAFT_12869, partial [Chlorella
variabilis]
Length = 185
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 110/167 (65%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YP+ +Y FGSK KD ++ R+ R+K Y GLR VEAVL+V HPH+L+LQ
Sbjct: 1 VYPVGNYTFGSKPPKFEKDSSVTQRLERLKEKYAREGLRRSVEAVLVVHEHGHPHVLVLQ 60
Query: 83 VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLL 142
+ S FKLPGGRLRPGE + G+ RKL L+ + DW V + LG WW+P+FE ++
Sbjct: 61 MGASFFKLPGGRLRPGEDEAEGMLRKLHSLLAPPAENMRPDWRVSDLLGTWWRPNFENMM 120
Query: 143 FPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P +V RPKE +LFL+ LP VPKN++L+AVPL ++++N
Sbjct: 121 YPYCPAHVARPKEVKRLFLIALPERCYLSVPKNMRLVAVPLFELYDN 167
>gi|156401665|ref|XP_001639411.1| predicted protein [Nematostella vectensis]
gi|156226539|gb|EDO47348.1| predicted protein [Nematostella vectensis]
Length = 196
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 3/174 (1%)
Query: 19 YVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHL 78
Y++ YPL++Y FG+KE++ KD ++ R RM+ Y+ G+R VE VL+V PH+
Sbjct: 6 YILIRYPLTNYTFGTKESLYEKDSSVQARFQRMREEYEKFGMRKTVEGVLIVHEHGLPHI 65
Query: 79 LLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDF 138
LLLQ+ + FKLPGG L PGE +I GLKR +T LS E G E DW V +CLG WW+P+F
Sbjct: 66 LLLQLGTTFFKLPGGELVPGEDEIDGLKRSMTEILSRPEHGPEPDWFVEDCLGNWWRPNF 125
Query: 139 E---TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
E +PY P ++ +PKE KLFLV+L F VP+N KL+A PL ++ +N
Sbjct: 126 EAPQARCYPYVPAHITKPKELRKLFLVQLGEKANFAVPRNYKLVAAPLFELFDN 179
>gi|428173402|gb|EKX42304.1| hypothetical protein GUITHDRAFT_88112 [Guillardia theta CCMP2712]
Length = 204
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 121/185 (65%), Gaps = 8/185 (4%)
Query: 11 INGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETL--YNRVLRMKSNYDAHGLRTCVEAVL 68
+ G +R +++ YPL Y G+KE KDE +R +RM++ Y+ GLR VE VL
Sbjct: 1 MAGGERLKTILNAYPLEQYKIGTKED---KDEEKDPSSRFVRMEAKYEQEGLRRTVEGVL 57
Query: 69 LVELFKHPHLLLLQV-RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGE--VDWE 125
+V KHPH+LLLQV + IF+LPGGRLRPGE++ GLKRKL KL+ + E + WE
Sbjct: 58 IVHQHKHPHVLLLQVGAHQIFRLPGGRLRPGETEEDGLKRKLINKLAPPDFKEEEPLPWE 117
Query: 126 VGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQ 185
VGE L WW+P+F++ +PY P +V RPKEC KLFL+ LP + F V KN L+A+P +
Sbjct: 118 VGEELATWWRPNFDSRQYPYLPVHVTRPKECRKLFLIHLPETCTFAVAKNHTLVAIPFYE 177
Query: 186 IHENH 190
+++N
Sbjct: 178 LYDNQ 182
>gi|255082171|ref|XP_002508304.1| predicted protein [Micromonas sp. RCC299]
gi|226523580|gb|ACO69562.1| predicted protein [Micromonas sp. RCC299]
Length = 221
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YP+S+Y FGSK A KD T+ ++R K Y+ G+R VEA+LLV HPH+L
Sbjct: 19 AIHVYPVSNYTFGSKAAKADKDATVAEAMIRYKDKYEKEGMRRTVEAILLVNQHDHPHVL 78
Query: 80 LLQVRNS----IFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVD-WEVGECLGMWW 134
LLQ + +KLPGGRLR GE ++ GL+RKL KLS +E ++ WE G+C+ W+
Sbjct: 79 LLQRTMAGGGVEYKLPGGRLRHGEGEVAGLQRKLHNKLSPSEQSLRIEHWECGDCVARWF 138
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P FE +PY P +V +PKE +++ +LP KF VPKNLKLLAVPL +++ N
Sbjct: 139 RPAFEPNYYPYLPAHVTKPKESRTVYIAQLPERCKFCVPKNLKLLAVPLFEMYAN 193
>gi|170584698|ref|XP_001897131.1| Pre-mrna cleavage factor, identical [Brugia malayi]
gi|24370468|emb|CAC70149.1| putative pre-mrna cleavage factor [Brugia malayi]
gi|158595461|gb|EDP34014.1| Pre-mrna cleavage factor, identical [Brugia malayi]
Length = 230
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 115/178 (64%), Gaps = 4/178 (2%)
Query: 12 NGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVE 71
N DR +++YPL++Y FG+K+ +D ++ R RM+ Y+ G+R VE VLLV
Sbjct: 33 NSIDR---AINLYPLTNYTFGTKDPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVH 89
Query: 72 LFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131
PH+LLLQ+ + FKLPGG L PGE ++ GLKR LT L +DG + W + + +G
Sbjct: 90 EHSLPHVLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLTETLG-RQDGAKDLWTIEDVIG 148
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+F+ +PY P +V +PKE TKLFLV+LP F VPKN KL+A PL ++++N
Sbjct: 149 NWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDN 206
>gi|197128970|gb|ACH45468.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 227
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F PKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAAPKNYKLVAAPLFELYDN 204
>gi|109157347|pdb|2CL3|A Chain A, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5)
gi|301016059|pdb|3N9U|A Chain A, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
gi|301016060|pdb|3N9U|B Chain B, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
Length = 230
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 157
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 207
>gi|393908210|gb|EFO24259.2| cleavage and polyadenylation specificity factor subunit 5 [Loa loa]
Length = 230
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+K+ +D ++ R RM+ Y+ G+R VE VLLV PH+L
Sbjct: 38 AINLYPLTNYTFGTKDPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVHEHSLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR LT L +DG + W + + +G WW+P+F+
Sbjct: 98 LLQIGTTFFKLPGGELNPGEDEVEGLKRLLTETLG-RQDGAKDLWTIEDVIGNWWRPNFD 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P +V +PKE TKLFLV+LP F VPKN KL+A PL ++++N
Sbjct: 157 PPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDN 206
>gi|392876462|gb|AFM87063.1| putative cleavage and polyadenylation specific factor 5
[Callorhinchus milii]
gi|392879578|gb|AFM88621.1| putative cleavage and polyadenylation specific factor 5
[Callorhinchus milii]
Length = 226
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V + PH+L
Sbjct: 35 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVL 94
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 95 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVQQDWVIDDCIGNWWRPNFE 153
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 154 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 203
>gi|119390446|pdb|2J8Q|A Chain A, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5) In Complex With A Sulphate
Ion.
gi|119390447|pdb|2J8Q|B Chain B, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5) In Complex With A Sulphate
Ion
Length = 227
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|388856433|emb|CCF49982.1| uncharacterized protein [Ustilago hordei]
Length = 203
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 121/187 (64%), Gaps = 24/187 (12%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ ++P++S+ F +K+A P +D ++ R+ R+++NY+ G+R VEAVL+V HPH+L
Sbjct: 4 TLTLHPVTSFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL---------------SLNEDGGEVDW 124
+LQ+ N+ FKLPG L+PGE ++ G+K +L +L N+D GE W
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEVEGMKARLDERLGPVESDPNSFGPNGEGRNKDDGE--W 121
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
E+ +CL WW+P+FET ++PY PP++ +PKEC KLF Q VPKN+KLLAVPL
Sbjct: 122 EIQDCLAQWWRPNFETFMYPYAPPHITKPKECKKLF-------QVLAVPKNMKLLAVPLF 174
Query: 185 QIHENHK 191
++++N +
Sbjct: 175 ELYDNSQ 181
>gi|295665162|ref|XP_002793132.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226278046|gb|EEH33612.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 278
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 119/186 (63%), Gaps = 5/186 (2%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 LPQGFSAKQPPTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + ++ G K +L +L+ + G +
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDE 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPL 196
Query: 184 CQIHEN 189
++++N
Sbjct: 197 FELYDN 202
>gi|168177228|pdb|3BHO|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im With Ap4a
Length = 208
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 17 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 76
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 77 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 135
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 136 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 185
>gi|346716318|ref|NP_001231176.1| cleavage and polyadenylation specificity factor subunit 5 [Sus
scrofa]
Length = 227
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|323463104|pdb|3Q2S|A Chain A, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463105|pdb|3Q2S|B Chain B, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463108|pdb|3Q2T|A Chain A, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
gi|323463109|pdb|3Q2T|B Chain B, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
Length = 207
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 16 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 75
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 76 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 134
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 135 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 184
>gi|387015292|gb|AFJ49765.1| Cleavage and polyadenylation specificity factor subunit 5 [Crotalus
adamanteus]
Length = 227
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|351707659|gb|EHB10578.1| Cleavage and polyadenylation specificity factor subunit 5, partial
[Heterocephalus glaber]
Length = 222
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|5901926|ref|NP_008937.1| cleavage and polyadenylation specificity factor subunit 5 [Homo
sapiens]
gi|78369318|ref|NP_001030408.1| cleavage and polyadenylation specificity factor subunit 5 [Bos
taurus]
gi|197101936|ref|NP_001125721.1| cleavage and polyadenylation specificity factor subunit 5 [Pongo
abelii]
gi|114662616|ref|XP_510978.2| PREDICTED: uncharacterized protein LOC454100 [Pan troglodytes]
gi|296231113|ref|XP_002761011.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Callithrix jacchus]
gi|332227869|ref|XP_003263115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Nomascus leucogenys]
gi|402908439|ref|XP_003916948.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Papio anubis]
gi|403305942|ref|XP_003943506.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Saimiri boliviensis boliviensis]
gi|410050346|ref|XP_003952896.1| PREDICTED: uncharacterized protein LOC454100 [Pan troglodytes]
gi|426242385|ref|XP_004015053.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Ovis aries]
gi|74735411|sp|O43809.1|CPSF5_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Cleavage and polyadenylation
specificity factor 25 kDa subunit; Short=CFIm25;
Short=CPSF 25 kDa subunit; AltName: Full=Nucleoside
diphosphate-linked moiety X motif 21; Short=Nudix motif
21; AltName: Full=Pre-mRNA cleavage factor Im 25 kDa
subunit
gi|75041887|sp|Q5RAI8.1|CPSF5_PONAB RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|88911280|sp|Q3ZCA2.1|CPSF5_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|297343088|pdb|3MDG|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uuguau
gi|297343089|pdb|3MDG|B Chain B, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uuguau
gi|297343091|pdb|3MDI|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uguaaa
gi|297343092|pdb|3MDI|B Chain B, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uguaaa
gi|2887288|emb|CAA05026.1| pre-mRNA cleavage factor I 25 kDa subunit [Homo sapiens]
gi|12655103|gb|AAH01403.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Homo
sapiens]
gi|55728968|emb|CAH91222.1| hypothetical protein [Pongo abelii]
gi|73586913|gb|AAI02698.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Bos
taurus]
gi|90079113|dbj|BAE89236.1| unnamed protein product [Macaca fascicularis]
gi|119603265|gb|EAW82859.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21,
isoform CRA_a [Homo sapiens]
gi|119603266|gb|EAW82860.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21,
isoform CRA_a [Homo sapiens]
gi|123982654|gb|ABM83068.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
gi|123997321|gb|ABM86262.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
gi|296477965|tpg|DAA20080.1| TPA: cleavage and polyadenylation specificity factor subunit 5 [Bos
taurus]
gi|355710208|gb|EHH31672.1| Cleavage and polyadenylation specificity factor 25 kDa subunit
[Macaca mulatta]
gi|355756786|gb|EHH60394.1| Cleavage and polyadenylation specificity factor 25 kDa subunit
[Macaca fascicularis]
gi|380783941|gb|AFE63846.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|383411307|gb|AFH28867.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|384943114|gb|AFI35162.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|410227088|gb|JAA10763.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410267142|gb|JAA21537.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410289374|gb|JAA23287.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410342431|gb|JAA40162.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|440902614|gb|ELR53384.1| Cleavage and polyadenylation specificity factor subunit 5 [Bos
grunniens mutus]
Length = 227
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|61371857|gb|AAX43744.1| cleavage and polyadenylation specific factor 5 [synthetic
construct]
Length = 228
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|310942946|pdb|3P5T|A Chain A, Cfim25-Cfim68 Complex
gi|310942947|pdb|3P5T|B Chain B, Cfim25-Cfim68 Complex
gi|310942948|pdb|3P5T|C Chain C, Cfim25-Cfim68 Complex
gi|310942949|pdb|3P5T|D Chain D, Cfim25-Cfim68 Complex
gi|310942950|pdb|3P5T|E Chain E, Cfim25-Cfim68 Complex
gi|310942951|pdb|3P5T|F Chain F, Cfim25-Cfim68 Complex
gi|310942962|pdb|3P6Y|A Chain A, Cf Im25-Cf Im68-Uguaa Complex
gi|310942963|pdb|3P6Y|B Chain B, Cf Im25-Cf Im68-Uguaa Complex
gi|310942966|pdb|3P6Y|E Chain E, Cf Im25-Cf Im68-Uguaa Complex
gi|310942967|pdb|3P6Y|F Chain F, Cf Im25-Cf Im68-Uguaa Complex
gi|310942970|pdb|3P6Y|I Chain I, Cf Im25-Cf Im68-Uguaa Complex
gi|310942971|pdb|3P6Y|J Chain J, Cf Im25-Cf Im68-Uguaa Complex
gi|310942974|pdb|3P6Y|M Chain M, Cf Im25-Cf Im68-Uguaa Complex
gi|310942975|pdb|3P6Y|N Chain N, Cf Im25-Cf Im68-Uguaa Complex
Length = 202
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 3 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 62
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 63 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 121
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 122 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 171
>gi|397506630|ref|XP_003823828.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5 [Pan paniscus]
Length = 227
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|13386106|ref|NP_080899.1| cleavage and polyadenylation specificity factor subunit 5 [Mus
musculus]
gi|84781636|ref|NP_001034093.1| cleavage and polyadenylation specificity factor subunit 5 [Rattus
norvegicus]
gi|73950369|ref|XP_535298.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Canis lupus familiaris]
gi|126296153|ref|XP_001364759.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Monodelphis domestica]
gi|194208617|ref|XP_001915145.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Equus caballus]
gi|291390150|ref|XP_002711573.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
gi|344289245|ref|XP_003416355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Loxodonta africana]
gi|348572714|ref|XP_003472137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cavia porcellus]
gi|354482938|ref|XP_003503652.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cricetulus griseus]
gi|395505985|ref|XP_003757316.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Sarcophilus harrisii]
gi|395839444|ref|XP_003792599.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Otolemur garnettii]
gi|410983545|ref|XP_003998099.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Felis catus]
gi|81880378|sp|Q9CQF3.1|CPSF5_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|88911281|sp|Q4KM65.1|CPSF5_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|12847971|dbj|BAB27778.1| unnamed protein product [Mus musculus]
gi|12859636|dbj|BAB31718.1| unnamed protein product [Mus musculus]
gi|14198424|gb|AAH08270.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|60551046|gb|AAH90834.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|68534752|gb|AAH98748.1| Cleavage and polyadenylation specific factor 5 [Rattus norvegicus]
gi|74151031|dbj|BAE27645.1| unnamed protein product [Mus musculus]
gi|74227593|dbj|BAE35655.1| unnamed protein product [Mus musculus]
gi|148679165|gb|EDL11112.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|149032465|gb|EDL87356.1| rCG39081 [Rattus norvegicus]
gi|195539864|gb|AAI68149.1| Cleavage and polyadenylation specific factor 5 [Rattus norvegicus]
gi|417397455|gb|JAA45761.1| Putative mrna cleavage factor i subunit [Desmodus rotundus]
gi|431914138|gb|ELK15397.1| Cleavage and polyadenylation specificity factor subunit 5 [Pteropus
alecto]
Length = 227
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|355708272|gb|AES03219.1| nudix -type motif 21 [Mustela putorius furo]
Length = 225
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 35 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 94
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 95 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 153
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 154 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 203
>gi|345778528|ref|XP_003431738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Canis lupus familiaris]
Length = 234
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 43 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHQLPHVL 102
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 103 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 161
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 162 HPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 211
>gi|41055411|ref|NP_957411.1| cleavage and polyadenylation specificity factor subunit 5 [Danio
rerio]
gi|82188244|sp|Q7T3C6.1|CPSF5_DANRE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|31418817|gb|AAH53172.1| Cleavage and polyadenylation specific factor 5 [Danio rerio]
gi|182891874|gb|AAI65427.1| Cpsf5 protein [Danio rerio]
Length = 228
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V + PH+L
Sbjct: 37 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVL 96
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 97 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFE 155
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 156 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 205
>gi|242019781|ref|XP_002430337.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
gi|212515461|gb|EEB17599.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
Length = 235
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FGSKE + KD ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 44 TVNLYPLTNYTFGSKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLLVHEHGLPHVL 103
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG LRPGE ++ GL+R LT L +DG + +W + + +G WW+P+FE
Sbjct: 104 LLQLGTTFFKLPGGELRPGEDEVEGLRRLLTETLG-RQDGVKQEWVIEDTIGNWWRPNFE 162
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY PP+V +PKE +LFLV+L F VPKN KL+A PL ++++N
Sbjct: 163 PPQYPYIPPHVTKPKEHKRLFLVQLAEKALFAVPKNYKLVAAPLFELYDN 212
>gi|31873228|emb|CAD97606.1| hypothetical protein [Homo sapiens]
gi|117644806|emb|CAL37869.1| hypothetical protein [synthetic construct]
gi|117645262|emb|CAL38097.1| hypothetical protein [synthetic construct]
gi|307684412|dbj|BAJ20246.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
Length = 227
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELDPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|318192410|ref|NP_001188025.1| cleavage and polyadenylation specificity factor subunit 5
[Ictalurus punctatus]
gi|308324627|gb|ADO29448.1| cleavage and polyadenylation specificity factor subunit 5
[Ictalurus punctatus]
Length = 228
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V + PH+L
Sbjct: 37 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVL 96
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 97 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFE 155
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 156 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 205
>gi|384491888|gb|EIE83084.1| hypothetical protein RO3G_07789 [Rhizopus delemar RA 99-880]
Length = 199
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 111/170 (65%), Gaps = 3/170 (1%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YPL +Y +KEA P +D ++ R+ R++++Y+ HG+R VEAVL+V HPH+L+ Q
Sbjct: 6 LYPLENYTLSTKEAQPEEDTSVAARLRRLEADYNQHGMRRSVEAVLVVHQHNHPHVLMFQ 65
Query: 83 VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN---EDGGEVDWEVGECLGMWWKPDFE 139
+ NS FKLPG L P + G+K L +KL E + DW +GECL WW+P++E
Sbjct: 66 IANSFFKLPGHYLEPEVDEAEGMKEILNKKLGPEDPLEWDSQNDWTIGECLSTWWRPNYE 125
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
++PY P +V PKE L++V LP ++ VPKN+KLLAVPL ++++N
Sbjct: 126 NYMYPYVPAHVTSPKEKKSLYIVHLPPNKVLSVPKNMKLLAVPLFELYDN 175
>gi|189053429|dbj|BAG35595.1| unnamed protein product [Homo sapiens]
Length = 227
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVTDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|225716952|gb|ACO14322.1| Cleavage and polyadenylation specificity factor subunit 5 [Esox
lucius]
Length = 230
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR +T L +DG + DW + +C+G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGGELSSGEDEVDGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFE 157
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 207
>gi|391346207|ref|XP_003747370.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Metaseiulus occidentalis]
Length = 233
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KEA+ KD ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 42 TVNLYPLTNYTFGTKEALYEKDPSVPARFQRMREEFEKIGMRRSVEGVLLVHEHGLPHVL 101
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR ++ L +DG + +W + + +G WW+P+FE
Sbjct: 102 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMSETLG-RQDGVKQEWTIEDTVGNWWRPNFE 160
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY P++ +PKE +LFLV+LP F VPKN KL+A PL ++++N +
Sbjct: 161 PAQYPYILPHITKPKEHKRLFLVQLPEKALFAVPKNYKLVAAPLFELYDNSQ 212
>gi|74138675|dbj|BAE27154.1| unnamed protein product [Mus musculus]
Length = 227
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGEFNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|225718018|gb|ACO14855.1| Cleavage and polyadenylation specificity factor subunit 5 [Caligus
clemensi]
Length = 230
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGGELSPGEDEVDGLKRLMTEILG-RQDGVKQDWVIDDSIGNWWRPNFE 157
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 207
>gi|198421202|ref|XP_002122804.1| PREDICTED: similar to pre-mrna cleavage factor im, 25kD subunit
[Ciona intestinalis]
Length = 239
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 112/169 (66%), Gaps = 1/169 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPL++Y FG+KE + +D T+ R RM+ +D G R VE VL+V PH+LL
Sbjct: 49 INLYPLTNYTFGTKEPLYERDSTVQARFQRMREEFDKAGQRRSVEGVLIVHEHGLPHVLL 108
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L GE+++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 109 LQLGTTFFKLPGGELHNGENEVDGLKRLMTETLG-RQDGVAQDWVIEDCIGNWWRPNFEP 167
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
L+PY P ++ +PKE KLFLV+L F VP+N KL+A PL ++++N
Sbjct: 168 PLYPYIPAHITKPKEHKKLFLVQLGEKALFAVPRNYKLVAAPLFELYDN 216
>gi|221222180|gb|ACM09751.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGGELSPGEDEVDGLKRLMTEILG-RQDGVKQDWVIDDSIGNWWRPNFE 157
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 207
>gi|321458629|gb|EFX69694.1| hypothetical protein DAPPUDRAFT_202691 [Daphnia pulex]
Length = 232
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPLS+Y FG+K+ + +D ++ R RM+ +D G+R VE +LLV PH+L
Sbjct: 41 TINLYPLSNYTFGTKDPLFERDPSVPARFQRMREEFDKVGMRRSVEGILLVHEHGLPHVL 100
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE DI GLKR LT L +DG DW + + +G WW+P+FE
Sbjct: 101 LLQLGTTFFKLPGGELNPGEDDIEGLKRLLTEILG-RQDGVVQDWLIEDSVGNWWRPNFE 159
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE KLFLV+L F VPKN KL+A PL ++++N +
Sbjct: 160 PPQYPYIPPHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 211
>gi|328716665|ref|XP_001944073.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Acyrthosiphon pisum]
Length = 232
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPLS+Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V PH+LL
Sbjct: 42 INLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPHVLL 101
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L P E ++ GLKR LT L +DG + +W V + +G WW+P+FE
Sbjct: 102 LQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLG-RQDGVQPEWTVEDTIGNWWRPNFEP 160
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+LP F VPKN KL+A PL ++ +N +
Sbjct: 161 PTYPYIPPHITKPKEHKRLFLVQLPDKALFAVPKNYKLVAAPLFELFDNAQ 211
>gi|339245685|ref|XP_003374476.1| cleavage and polyadenylation specificity factor subunit 5
[Trichinella spiralis]
gi|316972263|gb|EFV55946.1| cleavage and polyadenylation specificity factor subunit 5
[Trichinella spiralis]
Length = 221
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 4 EMGASVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTC 63
E+ + + SD V++YPL++Y FGSK A +D+T+ R RM++ Y+ HG+R
Sbjct: 14 EVDQTYLTSTSDTLNRTVNVYPLTNYTFGSKSAQQERDQTVQARFTRMRNEYEKHGMRRS 73
Query: 64 VEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVD 123
V+ VL+V PH+LLLQ+ ++ F+LPGG L PGE ++ GLKR LT L EDG +
Sbjct: 74 VDGVLIVHEHNLPHVLLLQLGSTFFRLPGGELEPGEDEVEGLKRLLTDCLG-REDGEQTP 132
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
W + + L WW+P+FE +PY +V +PKE K+ LV+LP F VP+N KL+A P+
Sbjct: 133 WVIEDTLSNWWRPNFEPARYPYLCTHVCKPKEHIKMLLVQLPEKALFAVPRNYKLVAAPI 192
Query: 184 CQIHEN 189
++++N
Sbjct: 193 FELYDN 198
>gi|452841703|gb|EME43640.1| hypothetical protein DOTSEDRAFT_54398 [Dothistroma septosporum
NZE10]
Length = 270
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Query: 16 RNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKH 75
R V +YPLS+Y FG+KE P +D ++ +R+ R++ Y+ HG+R EA+L+ H
Sbjct: 24 RQQPAVRLYPLSNYTFGTKETQPEEDASVKDRLKRLEEYYEKHGMRRSCEAILVCHEHNH 83
Query: 76 PHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN---EDGGEVDWEVGECLGM 132
PH+L+LQ+ N+ FKLPG + ++ G K +L +L+ + + DW V + +
Sbjct: 84 PHVLMLQIANAFFKLPGDYIPHDVDEVEGFKDRLNERLAPTGSLAEKDDRDWNVFDTIAQ 143
Query: 133 WWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
W++P+FET ++P+ PP+V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++N +
Sbjct: 144 WYRPNFETFMYPFLPPHVTRPKECKKLYFIQLPKEKVLSVPKNMKLLAVPLFELYDNSQ 202
>gi|48145955|emb|CAG33200.1| CPSF5 [Homo sapiens]
Length = 227
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + K ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKGSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|312074088|ref|XP_003139813.1| pre-mRNA cleavage factor [Loa loa]
Length = 241
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+K+ +D ++ R RM+ Y+ G+R VE VLLV PH+LLLQ+
Sbjct: 41 YPLTNYTFGTKDPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQI 100
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
+ FKLPGG L PGE ++ GLKR LT L +DG + W + + +G WW+P+F+ +
Sbjct: 101 GTTFFKLPGGELNPGEDEVEGLKRLLTETLG-RQDGAKDLWTIEDVIGNWWRPNFDPPRY 159
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY P +V +PKE TKLFLV+LP F VPKN KL+A PL ++++N
Sbjct: 160 PYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDN 205
>gi|427793241|gb|JAA62072.1| Putative mrna cleavage factor i subunit, partial [Rhipicephalus
pulchellus]
Length = 235
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KEA+ +D ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 44 TVNLYPLTNYTFGTKEALYERDSSVPARFQRMREEFEKIGMRRSVEGVLLVHEHGLPHVL 103
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 104 LLQLGTTFFKLPGGELNMGEDEVEGLKRLMTEILG-RQDGVKQDWVIEDTVGNWWRPNFE 162
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +L+LV+LP F VPKN KL+A PL ++++N +
Sbjct: 163 PPQYPYVPPHITKPKEHKRLYLVQLPEKALFAVPKNYKLVAAPLFELYDNAQ 214
>gi|157105268|ref|XP_001648792.1| pre-mrna cleavage factor im, 25kD subunit [Aedes aegypti]
gi|157118316|ref|XP_001653167.1| pre-mrna cleavage factor im, 25kD subunit [Aedes aegypti]
gi|108880136|gb|EAT44361.1| AAEL004266-PA [Aedes aegypti]
gi|108883290|gb|EAT47515.1| AAEL001371-PA [Aedes aegypti]
Length = 230
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR LT L +DG + DW V + +G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGGELSAGEDEVEGLKRLLTETLG-RQDGVKQDWIVEDTIGNWWRPNFE 157
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 158 PPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQ 209
>gi|145350060|ref|XP_001419441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579672|gb|ABO97734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 112/172 (65%), Gaps = 2/172 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VVD+Y LS+Y FG+K A KD T R+LRM++ Y+ G R V A+ +V + PH+L
Sbjct: 11 VVDVYSLSNYTFGTKRARGEKDATAAERLLRMRAQYEKEGKRRSVGAICMVSQHRTPHVL 70
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG--EVDWEVGECLGMWWKPD 137
LLQ+ + FKLPGGRLR GE D+ GL RK+ KL D G + ++++G+ + W++
Sbjct: 71 LLQITPTSFKLPGGRLRAGEGDVEGLARKMRNKLQPERDDGLEQYEFDIGDQVATWYRTS 130
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+E ++PY P ++ +PKE ++F+ LP F VPKNLKLLAVPL +++ N
Sbjct: 131 YEPQMYPYLPAHITKPKEEYRMFVAHLPEKCYFAVPKNLKLLAVPLFELYGN 182
>gi|109128665|ref|XP_001096261.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Macaca mulatta]
Length = 228
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+LLLQ+
Sbjct: 41 YPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQL 100
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
+ FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE +
Sbjct: 101 GTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFEPPQY 159
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 160 PYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 205
>gi|91093207|ref|XP_969509.1| PREDICTED: similar to CG3689 CG3689-PC [Tribolium castaneum]
Length = 228
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 114/172 (66%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
++++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 38 IINLYPLTNYIFGTKEPLFEKDPSVPARFQRMRDEFERIGMRRSVEGVLLVHEHGLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR LT L DG + DW V + +G WW+P+FE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLG-RLDGVKQDWLVEDIIGNWWRPNFE 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 157 PPQYPYIPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 208
>gi|209734330|gb|ACI68034.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|223647296|gb|ACN10406.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|223673179|gb|ACN12771.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGGELCPGEDEVDGLKRLMTEILG-RQDGVKQDWVIDDSIGNWWRPNFE 157
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 207
>gi|308807264|ref|XP_003080943.1| mRNA cleavage factor I subunit (ISS) [Ostreococcus tauri]
gi|116059404|emb|CAL55111.1| mRNA cleavage factor I subunit (ISS) [Ostreococcus tauri]
Length = 279
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 112/172 (65%), Gaps = 2/172 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VVD++ L +Y FG+K A KD + R+LRMK+ Y+ G R V A+ +V + PH+L
Sbjct: 85 VVDVHALGNYTFGTKRARGEKDSSAAARLLRMKTQYEREGKRRSVGAICMVSQHRTPHIL 144
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-LNEDG-GEVDWEVGECLGMWWKPD 137
LLQ+ + FKLPGGRLR GE + GL RK+ KL EDG G +++VG+ + W++
Sbjct: 145 LLQITPTTFKLPGGRLRAGEGEREGLARKMQNKLQPEREDGLGAYEFDVGDQVATWYRTS 204
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
FE ++PY P ++ +PKE K+F+V LP F VPKNLKLLAVPL +++ N
Sbjct: 205 FEPQMYPYLPAHITKPKEEHKIFIVHLPEKAAFAVPKNLKLLAVPLFELYGN 256
>gi|346469369|gb|AEO34529.1| hypothetical protein [Amblyomma maculatum]
Length = 240
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KEA+ +D ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 49 TVNLYPLTNYTFGTKEALYERDSSVPARFQRMREEFEKIGMRRSVEGVLLVHEHGLPHVL 108
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 109 LLQLGTTFFKLPGGELNMGEDEVEGLKRLMTEILG-RQDGVKQDWVIEDTVGNWWRPNFE 167
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +L+LV+LP F VPKN KL+A PL ++++N +
Sbjct: 168 PPQYPYVPPHITKPKEHKRLYLVQLPEKALFAVPKNYKLVAAPLFELYDNAQ 219
>gi|118778290|ref|XP_308558.3| AGAP007242-PA [Anopheles gambiae str. PEST]
gi|116132312|gb|EAA04203.3| AGAP007242-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 40 TINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 99
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR LT L +DG + DW V + +G WW+P+FE
Sbjct: 100 LLQLGTTFFKLPGGELSAGEDEVDGLKRLLTETLG-RQDGVKQDWIVEDTIGNWWRPNFE 158
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 159 PPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQ 210
>gi|405975730|gb|EKC40278.1| Cleavage and polyadenylation specificity factor subunit 5
[Crassostrea gigas]
Length = 220
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 112/169 (66%), Gaps = 1/169 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V PH+LL
Sbjct: 36 INLYPLTNYTFGTKEPLYEKDSSVPARFQRMRDEFEKIGMRRSVEGVLIVHEHGLPHVLL 95
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L GE + GLKR LT L +DGG ++W V + +G WW+P+FE
Sbjct: 96 LQLGTTFFKLPGGELNSGEDQVEGLKRLLTETLG-RQDGGTMEWVVEDTIGNWWRPNFEP 154
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE +LFLV+LP F VP+N KL+A PL ++++N
Sbjct: 155 PQYPYIPAHITKPKEHKRLFLVQLPEKALFAVPRNYKLVAAPLFELYDN 203
>gi|193618040|ref|XP_001951264.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Acyrthosiphon pisum]
Length = 226
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 112/171 (65%), Gaps = 1/171 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPLS+Y FG KE + KD ++ R RM+ + G+R VE VL+V + PH+LL
Sbjct: 42 INLYPLSNYKFGKKEHLFEKDPSVSARFQRMREEFKEIGMRRSVEGVLIVHIDWIPHVLL 101
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
L++ + FKLPGG+L P E ++ GLKR LT L ++G + DW V + +G WW+P+FE
Sbjct: 102 LKLTTNFFKLPGGQLNPAEDEVEGLKRLLTETLG-TQNGVQTDWTVEDTIGNWWRPNFEF 160
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY P ++ +PKE +LFLV+LP F VPKN K +AVPL ++ EN +
Sbjct: 161 TTYPYIPAHITKPKEHKRLFLVQLPDKAMFSVPKNYKFVAVPLFELFENAQ 211
>gi|268567562|ref|XP_002640028.1| Hypothetical protein CBG12500 [Caenorhabditis briggsae]
Length = 227
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
Query: 5 MGASVP---INGSDRNGY--VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHG 59
+ ASVP +N ++ + +++YPL++Y FG+K+A KD+++ R RMK Y+ G
Sbjct: 13 IAASVPESPMNFDEKPPFNRTINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVVG 72
Query: 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG 119
+R VEAVL+V PH+LLLQ+ + +KLPGG L GE +I G+ R L L DG
Sbjct: 73 MRRSVEAVLIVHEHSLPHILLLQIGTTFYKLPGGELEIGEDEISGVTRLLNDTLG-RTDG 131
Query: 120 GEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLL 179
+W + + +G WW+P+F+ +PY P +V +PKE TKL LV+LP F VPKN KL+
Sbjct: 132 ESNEWTIEDEIGNWWRPNFDPPRYPYIPAHVTKPKEHTKLLLVQLPAKSTFCVPKNFKLV 191
Query: 180 AVPLCQIHEN 189
A PL ++++N
Sbjct: 192 AAPLFELYDN 201
>gi|308499815|ref|XP_003112093.1| CRE-CFIM-1 protein [Caenorhabditis remanei]
gi|308268574|gb|EFP12527.1| CRE-CFIM-1 protein [Caenorhabditis remanei]
Length = 227
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KEA KD+++ R RMK Y+ G+R VEAVL+V PH+L
Sbjct: 33 TINVYPLTNYTFGTKEAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLPHIL 92
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + +KLPGG L GE ++ G+ R L L DG +W + + +G WW+P+F+
Sbjct: 93 LLQIGTTFYKLPGGELEIGEDEVSGVTRLLNETLG-RTDGESNEWTIEDEIGNWWRPNFD 151
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P +V +PKE TKL LV+LP F VPKN KL+A PL ++++N
Sbjct: 152 PPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDN 201
>gi|291394738|ref|XP_002713823.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
Length = 227
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R M+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQCMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L ++DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGMTFFKLPGGELNPGEDEVEGLKRLMTEILG-HQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|17507315|ref|NP_492334.1| Protein CFIM-1 [Caenorhabditis elegans]
gi|3877104|emb|CAB02106.1| Protein CFIM-1 [Caenorhabditis elegans]
Length = 227
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+K+A KD+++ R RMK Y+ G+R VEAVL+V PH+L
Sbjct: 33 TINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVMGMRRSVEAVLIVHEHSLPHIL 92
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + +KLPGG L GE +I G+ R L L DG +W + + +G WW+P+F+
Sbjct: 93 LLQIGTTFYKLPGGELELGEDEISGVTRLLNETLG-RTDGETNEWTIEDEIGNWWRPNFD 151
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P +V +PKE TKL LV+LP F VPKN KL+A PL ++++N
Sbjct: 152 PPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDN 201
>gi|168177225|pdb|3BAP|A Chain A, Crystal Structure Of The 25 Kda Subunit Of Human Cleavage
Factor Im
Length = 227
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R R + +D G R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRXREEFDKIGXRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLXTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|116007798|ref|NP_001036597.1| CG3689, isoform C [Drosophila melanogaster]
gi|113194891|gb|ABI31246.1| CG3689, isoform C [Drosophila melanogaster]
Length = 237
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 114/172 (66%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ +R RM+ +D G+R VE VLLV PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR L+ L +DG + +W V + +G WW+P+FE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLG-RQDGVKQEWIVEDTIGNWWRPNFE 164
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQ 216
>gi|241730686|ref|XP_002413834.1| mRNA cleavage factor I subunit, putative [Ixodes scapularis]
gi|215507650|gb|EEC17142.1| mRNA cleavage factor I subunit, putative [Ixodes scapularis]
Length = 233
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 111/172 (64%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KEA +D ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 42 TVNLYPLTNYTFGTKEAQYERDSSVPARFQRMREEFEKMGMRRSVEGVLLVHEHGLPHVL 101
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE + GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 102 LLQLGTTFFKLPGGELNPGEDEAEGLKRLMTEVLG-RQDGVKQDWLIEDTVGNWWRPNFE 160
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ PKE L LV+LP F VPKN KL+A PL ++++N +
Sbjct: 161 PPQYPYVPPHITAPKEHKMLHLVQLPEKALFAVPKNYKLVAAPLFELYDNAQ 212
>gi|221219102|gb|ACM08212.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGGELGPGEDEVDGLKRLMTEILG-RQDGVKQDWVIDDSIGNWWRPNFE 157
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A L ++++N
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAASLFELYDN 207
>gi|116789706|gb|ABK25350.1| unknown [Picea sitchensis]
Length = 161
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV ++PLS Y FG KEA KD L +R+ RM++N+ GLRT VE +LLV + HPHLL
Sbjct: 6 VVKVHPLSCYSFGKKEAKVDKDIFLSDRLDRMRANFMRDGLRTYVEGILLVYEYGHPHLL 65
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ N I +LPGGRLRPGE++I GLKRKLT KLS + + W++GEC G+WW+P+FE
Sbjct: 66 LLQKGNKIIRLPGGRLRPGENEIEGLKRKLTSKLSSSSSSVQPIWQIGECAGVWWRPNFE 125
Query: 140 TLLFPYFPPNVKRPKE 155
TL++PY PP++ +PK+
Sbjct: 126 TLMYPYCPPHINKPKK 141
>gi|345479668|ref|XP_003424005.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Nasonia vitripennis]
Length = 225
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 117/190 (61%), Gaps = 1/190 (0%)
Query: 2 SDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLR 61
S +P N S +++YPL++Y FG+KE + KD ++ R RM+ +D G+R
Sbjct: 16 SSSFDGKLPPNPSIAGNRTINLYPLTNYKFGTKEPLFEKDPSVPARFQRMRDEFDKIGMR 75
Query: 62 TCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGE 121
VE VLLV PH+L+LQ+ + FKLPGG L GE ++ GLKR LT L +DG +
Sbjct: 76 RSVEGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNAGEDEVEGLKRLLTEILG-RQDGVK 134
Query: 122 VDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAV 181
+W + + +G WW+P+FE +PY PP++ +PKE +LFLV+L VPKN KL+A
Sbjct: 135 QEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQEKAVVAVPKNYKLVAA 194
Query: 182 PLCQIHENHK 191
PL ++++N +
Sbjct: 195 PLFELYDNSQ 204
>gi|307193774|gb|EFN76452.1| Cleavage and polyadenylation specificity factor subunit 5
[Harpegnathos saltator]
Length = 228
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 37 TVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 96
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR LT +DG + +W + + +G WW+P+FE
Sbjct: 97 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLTETFG-RQDGVKQEWVIEDTIGNWWRPNFE 155
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 156 PPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 207
>gi|340716896|ref|XP_003396927.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Bombus terrestris]
gi|340716898|ref|XP_003396928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Bombus terrestris]
Length = 228
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 37 TVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 96
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR LT +DG + +W + + +G WW+P+FE
Sbjct: 97 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLTETFG-RQDGVKQEWVIEDTIGNWWRPNFE 155
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 156 PPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 207
>gi|341876875|gb|EGT32810.1| hypothetical protein CAEBREN_19310 [Caenorhabditis brenneri]
gi|341898707|gb|EGT54642.1| hypothetical protein CAEBREN_25048 [Caenorhabditis brenneri]
Length = 227
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+K+A KD+++ R RMK Y+ G+R VEAVL+V PH+L
Sbjct: 33 TINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLPHIL 92
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + +KLPGG L GE ++ G+ R L L DG +W + + +G WW+P+F+
Sbjct: 93 LLQIGTTFYKLPGGELEIGEDEVSGVTRLLNETLG-RTDGEPNEWTIEDEIGNWWRPNFD 151
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P +V +PKE TKL LV+LP F VPKN KL+A PL ++++N
Sbjct: 152 PPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDN 201
>gi|66499810|ref|XP_624522.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Apis mellifera]
gi|350396581|ref|XP_003484601.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Bombus impatiens]
gi|380019194|ref|XP_003693499.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Apis florea]
gi|383853072|ref|XP_003702048.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Megachile rotundata]
Length = 228
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 37 TVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 96
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR LT +DG + +W + + +G WW+P+FE
Sbjct: 97 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLTETFG-RQDGVKQEWVIEDTIGNWWRPNFE 155
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 156 PPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 207
>gi|307179524|gb|EFN67838.1| Cleavage and polyadenylation specificity factor subunit 5
[Camponotus floridanus]
Length = 222
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 37 TVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 96
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR LT +DG + +W + + +G WW+P+FE
Sbjct: 97 LLQLGTTFFKLPGGELNTGEDEVEGLKRLLTETFG-RQDGVKQEWVIEDTIGNWWRPNFE 155
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 156 PPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 207
>gi|332021628|gb|EGI61987.1| Cleavage and polyadenylation specificity factor subunit 5
[Acromyrmex echinatior]
Length = 228
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 37 TVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 96
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR LT +DG + +W + + +G WW+P+FE
Sbjct: 97 LLQLGTTFFKLPGGELNTGEDEVEGLKRLLTETFG-RQDGVKQEWVIEDTIGNWWRPNFE 155
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 156 PPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 207
>gi|209734540|gb|ACI68139.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|303666153|gb|ADM16213.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 229
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V + PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRAVEGVLIVHEHRLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR +T L +DG + DW + + +G WW+P+FE
Sbjct: 98 LLQLGTTFFKLPGGELNAGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDSIGNWWRPNFE 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 206
>gi|303279404|ref|XP_003058995.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460155|gb|EEH57450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 8/189 (4%)
Query: 11 INGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV 70
+ GS + +YP+++Y FG K KD T R++ Y+ G R V+AV+LV
Sbjct: 1 MAGSSHGARTMHVYPVTNYSFGQKAGRAAKDATPSATATRLREAYERDGPRRSVDAVMLV 60
Query: 71 ELFKHPHLLLLQVRNS------IFKLPGGRLRPGESDIYGLKRKLTRKLSLNED--GGEV 122
PH+LLLQ S F+LPGGRLR GE ++ GL+RKL KLS ++ GG
Sbjct: 61 NQHNTPHVLLLQSAGSGPGAPATFRLPGGRLRRGEGELEGLQRKLHSKLSPSDASLGGAK 120
Query: 123 DWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVP 182
+WE G+CL W +P + +PY P + RPKE ++ V+LP KF VPK+LKLLAVP
Sbjct: 121 EWETGDCLARWHRPAHDAHFYPYLPTHATRPKEARAVYAVQLPEKCKFAVPKSLKLLAVP 180
Query: 183 LCQIHENHK 191
L +++ N K
Sbjct: 181 LFELYGNEK 189
>gi|156545052|ref|XP_001600794.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Nasonia vitripennis]
Length = 214
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 7/191 (3%)
Query: 1 MSDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGL 60
M+ G++V G + IYPL++Y FG+KE + KD ++ R RM+ +D G+
Sbjct: 10 MASSSGSTV------TGGKTITIYPLTNYKFGTKEPLFEKDPSVPARFQRMRDEFDKIGM 63
Query: 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
R VE VLLV PH+L+LQ+ + FKLPGG L GE ++ GLKR LT L +DG
Sbjct: 64 RRSVEGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNAGEDEVEGLKRLLTEILG-RQDGV 122
Query: 121 EVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLA 180
+ +W + + +G WW+P+FE +PY PP++ +PKE +LFLV+L VPKN KL+A
Sbjct: 123 KQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQEKAVVAVPKNYKLVA 182
Query: 181 VPLCQIHENHK 191
PL ++++N +
Sbjct: 183 APLFELYDNSQ 193
>gi|432101736|gb|ELK29740.1| Cleavage and polyadenylation specificity factor subunit 5 [Myotis
davidii]
Length = 195
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 111/171 (64%), Gaps = 1/171 (0%)
Query: 19 YVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHL 78
+ +++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+
Sbjct: 3 HTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHV 62
Query: 79 LLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDF 138
LLLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+F
Sbjct: 63 LLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNF 121
Query: 139 ETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
E P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 122 EPPQVSVHPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 172
>gi|114051528|ref|NP_001040354.1| cleavage and polyadenylation specific factor 5 [Bombyx mori]
gi|95102614|gb|ABF51245.1| cleavage and polyadenylation specific factor 5 [Bombyx mori]
Length = 227
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPL++Y FG+KE + KD ++ R RM+ + G+R VE VLLV PH+LL
Sbjct: 37 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 96
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L PGE +I GLKR LT L +DG + +W + + +G WW+P+FE
Sbjct: 97 LQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG-RQDGVKQEWLIEDTIGNWWRPNFEP 155
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 156 PQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQ 206
>gi|425772729|gb|EKV11124.1| Cleavage and polyadenylation specific factor 5 [Penicillium
digitatum PHI26]
gi|425775148|gb|EKV13431.1| Cleavage and polyadenylation specific factor 5 [Penicillium
digitatum Pd1]
Length = 299
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 121/206 (58%), Gaps = 24/206 (11%)
Query: 8 SVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAV 67
+VP + + + V +YPLS+Y FG+KE P +D ++ R+ R++ +Y HG+R E +
Sbjct: 16 TVPKDFTAQQPETVRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYGLHGMRRTCEGI 75
Query: 68 LLVELFKHPHLLLLQVRNSIFKL-------------------PGGRLRPGESDIYGLKRK 108
L+ HPH+L+LQ+ N+ FKL PG L + +I G K++
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLQVLYCLYAFIHNPLLIVFRPGDYLHHEDDEIEGFKKR 135
Query: 109 LTRKLS-----LNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVK 163
L +L+ + +G DWE+ + L WW+P+FET ++P+ P +V RPKEC KL+ ++
Sbjct: 136 LNERLAPVGSQFSGEGVNDDWEISDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIR 195
Query: 164 LPVSQKFFVPKNLKLLAVPLCQIHEN 189
LP + VPKN+KLLAVPL ++++N
Sbjct: 196 LPKKKVLSVPKNMKLLAVPLFELYDN 221
>gi|226471030|emb|CAX70596.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226471032|emb|CAX70597.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226487322|emb|CAX75526.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226487324|emb|CAX75527.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
Length = 215
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPL SY FG+KE +D ++ R R++ +++ +G+R VE +LLV PH+L
Sbjct: 24 TITLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVL 83
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE +I GLKR L+ L DG VDW +C+G WW+P+FE
Sbjct: 84 LLQL-GTFFKLPGGELHPGEEEIEGLKRLLSEMLG-RTDGIPVDWIPEDCIGNWWRPNFE 141
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
+PY P +V +PKE T+LFL++LP F VP N KL+A PL ++ +N +
Sbjct: 142 PPRYPYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARA 194
>gi|256070717|ref|XP_002571689.1| pre-mRNA cleavage factor im 25kD subunit [Schistosoma mansoni]
Length = 215
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPL SY FG+KE +D ++ R R++ +++ +G+R VE +LLV PH+L
Sbjct: 24 TITLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVL 83
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE +I GLKR L+ L DG VDW +C+G WW+P+FE
Sbjct: 84 LLQL-GTFFKLPGGELHPGEEEIEGLKRLLSEMLG-RTDGIPVDWIPEDCIGNWWRPNFE 141
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
+PY P +V +PKE T+LFL++LP F VP N KL+A PL ++ +N +
Sbjct: 142 PPRYPYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARA 194
>gi|289741289|gb|ADD19392.1| mRNA cleavage factor I subunit [Glossina morsitans morsitans]
Length = 232
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPL+ Y FG KE + KD ++ +R RM+ +D G+R VE VLLV PH+L
Sbjct: 41 TIKLYPLTDYTFGCKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 100
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE + GLKR LT L +DG + +W V + +G WW+P+FE
Sbjct: 101 LLQLGTTFFKLPGGELNAGEDGVEGLKRLLTETLG-RQDGIKQEWVVEDIIGNWWRPNFE 159
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE +LFLV+L F VPKN KL+A PL ++++N +
Sbjct: 160 PPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQ 211
>gi|443730241|gb|ELU15845.1| hypothetical protein CAPTEDRAFT_219560 [Capitella teleta]
Length = 195
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KEA+ KD ++ R RM+ + +G+R E VL+V PH+LLLQ+
Sbjct: 8 YPLTNYTFGTKEALYEKDASVQERFKRMRQEFADNGMRRTAEGVLIVHEHGLPHVLLLQL 67
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
+ FKLPGG L+ GE GLKR LT L +D DW + + +G WW+P+FE +
Sbjct: 68 GTTFFKLPGGELKNGEDQTEGLKRLLTEMLG-RQDQAPTDWTIEDTIGNWWRPNFEPPQY 126
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PY P ++ +PKE +LFLV+LP F VP+N KL+A PL ++++N
Sbjct: 127 PYIPAHITKPKEHKRLFLVQLPEKALFAVPRNYKLVAAPLFELYDN 172
>gi|291388431|ref|XP_002710785.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
Length = 227
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R LRM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFLRMQEEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE + GLK +T L +DG DW + +C+G W+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEGEGLKHLMTEILG-RQDGVLQDWVIDDCIGNCWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PK KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PPQYPYIPAHIAKPKAHKKLFLVQLQEKALFAVPKNYKLVAAPLIELYDN 204
>gi|221220044|gb|ACM08683.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 229
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 111/170 (65%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V + PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRAVEGVLIVHEHRLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR +T L +DG + W + + +G WW+P+FE
Sbjct: 98 LLQLGTTFFKLPGGELNAGEDEVEGLKRLMTEILG-RQDGVKQGWVIDDSIGNWWRPNFE 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 206
>gi|225714416|gb|ACO13054.1| Cleavage and polyadenylation specificity factor subunit 5
[Lepeophtheirus salmonis]
Length = 223
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 111/171 (64%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
V+++PL++Y FG+K+ + KD ++ R RM+ +++ G+R VE VLLV PH+LL
Sbjct: 32 VNLFPLTNYTFGTKDPLFEKDPSVPARFQRMRDDFEKMGMRRSVEGVLLVHEHGLPHVLL 91
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L+ GE ++ GLKR +T L E W + + +G WW+P+FE
Sbjct: 92 LQLGTTFFKLPGGELKLGEDEVQGLKRIMTDTLGRPEAKDPDTWIIEDTIGNWWRPNFEP 151
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE KLFLV+LP F VP+N KL+A PL ++ +N +
Sbjct: 152 PQYPYIPPHITKPKEHRKLFLVQLPERSYFAVPRNYKLVAAPLFELFDNSQ 202
>gi|225709978|gb|ACO10835.1| Cleavage and polyadenylation specificity factor subunit 5 [Caligus
rogercresseyi]
Length = 227
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
++YPL++Y FG+K+ + KD ++ R RM+ ++ G+R V+ +LLV PH+LL
Sbjct: 37 ANLYPLTNYTFGTKDPLFEKDPSVPARFQRMRDEFEKIGMRRSVDGILLVHEHGLPHVLL 96
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L+PGE ++ GL+R LT L D W + + +G WW+P+FE
Sbjct: 97 LQLGTTFFKLPGGELQPGEDEVQGLQRLLTDTLG-RPDSVPTQWIIEDTIGNWWRPNFEP 155
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+PY PP++ +PKE KLF V+LP F VP+N KL+A PL ++++N +
Sbjct: 156 AQYPYIPPHITKPKEHRKLFFVQLPEKSYFAVPRNYKLVAAPLFELYDNSQ 206
>gi|353233014|emb|CCD80369.1| putative pre-mRNA cleavage factor im, 25kD subunit [Schistosoma
mansoni]
Length = 208
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 109/169 (64%), Gaps = 2/169 (1%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL SY FG+KE +D ++ R R++ +++ +G+R VE +LLV PH+LLLQ+
Sbjct: 21 YPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVLLLQL 80
Query: 84 RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLF 143
+ FKLPGG L PGE +I GLKR L+ L DG VDW +C+G WW+P+FE +
Sbjct: 81 -GTFFKLPGGELHPGEEEIEGLKRLLSEMLG-RTDGIPVDWIPEDCIGNWWRPNFEPPRY 138
Query: 144 PYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
PY P +V +PKE T+LFL++LP F VP N KL+A PL ++ +N +
Sbjct: 139 PYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARA 187
>gi|334362315|gb|AEG78357.1| cleavage and polyadenylation specific factor 5-like protein
[Epinephelus coioides]
Length = 182
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
Query: 31 FGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKL 90
FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+LLLQ+ + FKL
Sbjct: 2 FGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKL 61
Query: 91 PGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNV 150
PGG L PGE ++ GLKR +T L +DG + DW + +C+G WW+P+FE +PY P ++
Sbjct: 62 PGGELSPGEDEVEGLKRLMTEILG-RQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHI 120
Query: 151 KRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 121 TKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 159
>gi|358254013|dbj|GAA54051.1| cleavage and polyadenylation specificity factor subunit 5
[Clonorchis sinensis]
Length = 215
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPL SY FG+K+ +D ++ R R++ ++D +G+R VE VLLV PH+L
Sbjct: 24 TITLYPLKSYSFGTKDPNYERDRSVPARFQRLQEDFDKYGMRRSVEGVLLVHEHNLPHVL 83
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR L+ L DG V W +C+G WW+P+FE
Sbjct: 84 LLQL-GTFFKLPGGELNPGEEELEGLKRLLSEMLG-RTDGVPVGWVPEDCIGNWWRPNFE 141
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
+PY P +V +PKE T+LFL++LP F VP N KL+A PL ++ +N +
Sbjct: 142 PPRYPYIPAHVTKPKEHTRLFLMQLPEKTLFAVPSNYKLVAAPLFELFDNARA 194
>gi|66825117|ref|XP_645913.1| NUDIX hydrolase family protein [Dictyostelium discoideum AX4]
gi|74858879|sp|Q55E68.1|CPSF5_DICDI RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|60474098|gb|EAL72035.1| NUDIX hydrolase family protein [Dictyostelium discoideum AX4]
Length = 200
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
Query: 27 SSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS 86
+SY FG +E K+++L +++ R+K +Y+ GLR VE ++++ HPH+LLLQ N+
Sbjct: 13 TSYSFGKEEKK-EKEQSLTSKLARLKDSYEKEGLRKAVEGIIIIHDHGHPHILLLQ-DNN 70
Query: 87 IFKLPGGRLRPGESDIYGLKRKLTRKLS-LNEDGGEVDWEVGECLGMWWKPDFETLLFPY 145
FKLPGG+L+PGE++I GL RKLT+KLS + WE+G+ + WW+P+FE LFPY
Sbjct: 71 YFKLPGGKLKPGENEIDGLIRKLTKKLSPTGTPVSDAPWEIGDHVSTWWRPNFEPSLFPY 130
Query: 146 FPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
P ++ +PKEC KLF+V LP KF V NL L+AV L +I+ N +
Sbjct: 131 IPSHITKPKECKKLFVVTLPEKCKFAVSNNLSLIAVSLYEIYNNSQ 176
>gi|221111867|ref|XP_002167860.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Hydra magnipapillata]
Length = 217
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 106/170 (62%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V +YPLS+Y FG+KEA+ KD ++ R RM+ +D G+R VE L+V PH+L
Sbjct: 25 TVYLYPLSNYTFGTKEALYEKDSSVQARFQRMRDEFDTLGMRRNVEGCLIVHEHGLPHIL 84
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE + GLKR ++ L + + W+ + L WW+P+FE
Sbjct: 85 LLQLGTTFFKLPGGELMAGEDESEGLKRSMSEMLGKPDGTDPIAWQCEDVLSNWWRPNFE 144
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
T ++PY P ++ +PKE ++FL +LP F VP+N KL+A PL ++ +N
Sbjct: 145 TPIYPYIPAHITKPKEQKRIFLTQLPEKATFNVPRNYKLVAAPLFELFDN 194
>gi|291226047|ref|XP_002733010.1| PREDICTED: cleavage and polyadenylation specific factor 5-like
[Saccoglossus kowalevskii]
Length = 226
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPL++Y FG+K+ + KD ++ R RM+ +D G R VE VL+V PH+L
Sbjct: 35 AISLYPLTNYTFGTKDPLYEKDASVAARFQRMREEFDKMGTRRTVEGVLIVHEHGLPHVL 94
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR LT L +DG + DW + +G W++P+FE
Sbjct: 95 LLQLGTTFFKLPGGELAPGEDEVDGLKRLLTEILG-RQDGIQQDWMTEDVIGNWYRPNFE 153
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE +L+LV+L F VP+N KL+A PL ++++N
Sbjct: 154 PPQYPYVPAHITKPKEHKRLYLVQLGEKALFAVPRNYKLVAAPLFELYDN 203
>gi|210076035|ref|XP_505412.2| YALI0F14421p [Yarrowia lipolytica]
gi|199424960|emb|CAG78221.2| YALI0F14421p [Yarrowia lipolytica CLIB122]
Length = 250
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YP S+Y F +K+A +D ++ R+ R+KS YD G+ VE V L F P++
Sbjct: 27 TIRLYPSSNYVFATKDAQVERDVSVQARMQRLKSMYDESGMLRYVEGVFLCHEFGTPYVF 86
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYG-LKRKLTRKLSLNEDGGEVD----WEVGECLGMWW 134
LLQ+ N+ FKLPG L P E D G L RKL +LS E+G + + W+V +CL WW
Sbjct: 87 LLQLPNNFFKLPGEYLDPDEEDEEGGLLRKLADRLS-PENGEDQENSKSWKVLDCLAQWW 145
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FE ++P+ PP++ RPKEC K FL+ LP FFVP N+ LAVPL ++++N
Sbjct: 146 RPNFEVFMYPFLPPHISRPKECKKTFLISLPEKIAFFVPSNMTFLAVPLFELYDN 200
>gi|340383433|ref|XP_003390222.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Amphimedon queenslandica]
Length = 212
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
++ +YPLS+Y FG+KE + KD T+ +R LR+K +Y+ G+R V+ V+LV PH+L
Sbjct: 21 LIKLYPLSNYTFGTKEPLYEKDRTVESRFLRLKEDYEKTGMRRSVDGVVLVHEHNLPHVL 80
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ ++ FKLP G + PGES+ G++R + L ED W V + + WW+P+FE
Sbjct: 81 LLQLGSTFFKLPSGEVGPGESEAEGVQRIVNDTLG-KEDTPLSTWIVEDVVANWWRPNFE 139
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+ +PY P + PKE KLFLV+LP F VP+N KL+A PL ++++N
Sbjct: 140 SPQYPYIPAHCTHPKEHKKLFLVQLPERTMFHVPRNYKLVAAPLFELYDN 189
>gi|340385713|ref|XP_003391353.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Amphimedon queenslandica]
Length = 202
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
++ +YPLS+Y FG+KE + KD T+ +R LR+K +Y+ G+R V+ V+LV PH+L
Sbjct: 11 LIKLYPLSNYTFGTKEPLYEKDRTVESRFLRLKEDYEKTGMRRSVDGVVLVHEHNLPHVL 70
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ ++ FKLP G + PGES+ G++R + L ED W V + + WW+P+FE
Sbjct: 71 LLQLGSTFFKLPSGEVGPGESEAEGVQRIVNDTLG-KEDTPLSTWIVEDVVANWWRPNFE 129
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+ +PY P + PKE KLFLV+LP F VP+N KL+A PL ++++N
Sbjct: 130 SPQYPYIPAHCTHPKEHKKLFLVQLPERTMFHVPRNYKLVAAPLFELYDN 179
>gi|313238828|emb|CBY13829.1| unnamed protein product [Oikopleura dioica]
Length = 221
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 111/170 (65%), Gaps = 2/170 (1%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
VD+Y L +Y FG+KE + +D +R R+K Y A G R V+AV++VE PH LL
Sbjct: 28 VDVYSLGNYNFGTKEEMIDQDGMNDDRFDRLKEEYAATGTRRTVQAVIVVEEHGLPHFLL 87
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVG-ECLGMWWKPDFE 139
LQ+ + FKLPGG++ P E +I GLKR LT+ LS+ + DW++ + WW+P+F
Sbjct: 88 LQLNPNFFKLPGGQILPHEDEIAGLKRILTQTLSVPGNAKH-DWQIEPTAVATWWRPNFS 146
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
L+P+ P +VK PKE ++FLV+L SQ+F +P+N KL+A P+ ++++N
Sbjct: 147 QNLYPFMPAHVKHPKERRQVFLVRLTGSQQFAIPRNFKLVAAPIFEVYDN 196
>gi|312372821|gb|EFR20698.1| hypothetical protein AND_19658 [Anopheles darlingi]
Length = 530
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 117/196 (59%), Gaps = 25/196 (12%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV--------- 70
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV
Sbjct: 40 TINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVSAVLQRESF 99
Query: 71 -------------ELFKH--PHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115
++ +H PH+LLLQ+ + FKLPGG L GE ++ GLKR LT L
Sbjct: 100 ANGGFIRFFPRRGQVHEHGLPHVLLLQLGTTFFKLPGGELSAGEDEVEGLKRLLTETLG- 158
Query: 116 NEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKN 175
+DG + DW V + +G WW+P+FE +PY PP++ +PKE +LFLV+L F VPKN
Sbjct: 159 RQDGVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKN 218
Query: 176 LKLLAVPLCQIHENHK 191
KL+A PL ++++N +
Sbjct: 219 YKLVAAPLFELYDNSQ 234
>gi|330846152|ref|XP_003294914.1| hypothetical protein DICPUDRAFT_160005 [Dictyostelium purpureum]
gi|325074528|gb|EGC28564.1| hypothetical protein DICPUDRAFT_160005 [Dictyostelium purpureum]
Length = 200
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 111/166 (66%), Gaps = 3/166 (1%)
Query: 27 SSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS 86
+SY FG +E K++++ +++ R+K +Y+ G R VE +++V HPH+LLLQ NS
Sbjct: 12 TSYSFGKEEKK-EKEQSVTSKLTRLKESYEKEGQRRAVEGIIIVHDHGHPHILLLQ-DNS 69
Query: 87 IFKLPGGRLRPGESDIYGLKRKLTRKLS-LNEDGGEVDWEVGECLGMWWKPDFETLLFPY 145
FKLPGG+L+PGE+D+ GL RKLT+KLS + WE+G+ + WW+P+FE L+PY
Sbjct: 70 YFKLPGGKLKPGENDVEGLIRKLTKKLSPTGTSVADSPWEIGDHVSTWWRPNFEPTLYPY 129
Query: 146 FPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
P ++ +PKEC K+F+V LP KF V L L+AV L +I+ N +
Sbjct: 130 IPTHITKPKECKKMFVVTLPEKCKFAVSNELSLIAVSLYEIYNNSQ 175
>gi|351710258|gb|EHB13177.1| Cleavage and polyadenylation specificity factor subunit 5
[Heterocephalus glaber]
Length = 227
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 108/170 (63%), Gaps = 1/170 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + K ++ R M+ +D G+R +E VL+V + P +L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKSSSVAARFQHMREEFDKIGIRRTIEGVLIVHEHRLPRVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L P E ++ GLK +T L +DG DW + +C+G WW+ +FE
Sbjct: 96 LLQLGTTFFKLPGGELNPREDEVEGLKCLMTEILG-RQDGVLQDWVIDDCIGNWWRSNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
L +PY P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 155 PLQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204
>gi|240277471|gb|EER40979.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
capsulatus H143]
Length = 269
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 112/181 (61%), Gaps = 11/181 (6%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 LPQGFSAKQPPTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGE 128
+ HPH+L+LQ+ N+ FKLPG L + ++ G K +L +L+ VG
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLA----------PVGS 126
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188
WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++
Sbjct: 127 QFS-WWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYD 185
Query: 189 N 189
N
Sbjct: 186 N 186
>gi|320166492|gb|EFW43391.1| cleavage and polyadenylation specific factor 5 [Capsaspora
owczarzaki ATCC 30864]
Length = 198
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 111/169 (65%), Gaps = 2/169 (1%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
V+++PL++Y FG K+ +D ++ R+ R+K ++ +G R VEAVLLV HPHLLL
Sbjct: 9 VNLFPLTNYSFGIKDPQYERDPSVPTRMQRLKDEFEQYGSRRTVEAVLLVHEHNHPHLLL 68
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L GE +I G +R LT+ L++ +G + W V E + W++P ++
Sbjct: 69 LQLGTTFFKLPGGELDIGEDEITGCQRWLTKTLAV--EGTSIPWNVCEIVCNWYRPSYDQ 126
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P +V RPKE ++F+V+LP + VPKN KL+A PL ++H+N
Sbjct: 127 NQYPYIPGHVTRPKEHRRVFVVELPPNAALAVPKNYKLVAAPLFELHDN 175
>gi|392575279|gb|EIW68413.1| hypothetical protein TREMEDRAFT_63582 [Tremella mesenterica DSM
1558]
Length = 224
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 25 PLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVR 84
P+ +Y +EA +D ++ R+ R++ Y G+R VE V++V PH+L+LQV
Sbjct: 10 PMQNYTLIEREAQAEEDSSVSARMQRLEKQYAETGMRRSVEGVMVVMEHGFPHVLVLQVA 69
Query: 85 NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN-EDGGEV------DWEVGECLGMWWKPD 137
N +KLPGG L P E D GL ++ +L + DGG V DW VGECL +WW+P+
Sbjct: 70 NGFYKLPGGYLDPTEPDGEGLLARMNEQLGVPLPDGGYVRSKDGKDWTVGECLSIWWRPN 129
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
F+T +PY P +V PKEC KL++V LPV + +P N+KL+A+P+ + ++N
Sbjct: 130 FDTFSYPYLPAHVSFPKECRKLYMVNLPVKKTLAIPANMKLIALPVYEFYDN 181
>gi|72008807|ref|XP_784907.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Strongylocentrotus purpuratus]
Length = 227
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YPL++Y FG+KE + KD ++ R RMK + G R VE VL+V PH+LLLQ
Sbjct: 39 LYPLTNYTFGTKEPLYEKDSSVPARFQRMKDEFQKMGTRRSVEGVLIVHEHDLPHVLLLQ 98
Query: 83 VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLL 142
+ + FKLPGG L+ GE ++ GLKR +T L +DG + DW V + + W++P+FE
Sbjct: 99 LGTTFFKLPGGELKAGEDEMDGLKRLMTEILG-RQDGVQQDWMVEDIIANWYRPNFEPPQ 157
Query: 143 FPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KL+ V+L F VP+N KL+A PL ++++N
Sbjct: 158 YPYIPAHITKPKEHKKLYFVQLAEKALFAVPRNYKLVAAPLFELYDN 204
>gi|452825717|gb|EME32712.1| hypothetical protein Gasu_00780 [Galdieria sulphuraria]
Length = 226
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 102/172 (59%), Gaps = 6/172 (3%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
V++Y + +Y FG+K+A + E R+K Y GLR V VLLV +HPH+L
Sbjct: 36 TVNLYKVDNYTFGTKQASQKQHE---RNPQRLKEKYQERGLRHSVAGVLLVHHHRHPHVL 92
Query: 80 LLQVRNSI--FKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPD 137
+LQ F LPGGRLRPGE D+ GL RKL +L + WEVG+ L WW PD
Sbjct: 93 VLQRTKDAGSFWLPGGRLRPGEGDLEGLSRKLDNRLK-SPSQERSHWEVGDFLATWWYPD 151
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
F +PY PP+V +PKE L+LV+LP S F VP +L+LLA+PL Q+ N
Sbjct: 152 FSDNRYPYIPPHVTKPKEKLNLYLVQLPESCAFSVPSDLQLLAIPLFQVFNN 203
>gi|361128593|gb|EHL00525.1| putative Cleavage and polyadenylation specificity factor subunit 5
[Glarea lozoyensis 74030]
Length = 218
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 99/148 (66%), Gaps = 5/148 (3%)
Query: 47 RVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLK 106
R+ R++ +Y HG+R E +L+ HPH+L+LQ+ N+ FKLPG L+P + +I G K
Sbjct: 3 RLKRLEEHYINHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDEEISGFK 62
Query: 107 RKLTRKLS-----LNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFL 161
+L +L+ + +G +WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+
Sbjct: 63 ERLNERLAPVGSQFSGEGVNEEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYF 122
Query: 162 VKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
++LP + VPKN+KLLAVPL ++++N
Sbjct: 123 IQLPRQKVLSVPKNMKLLAVPLFELYDN 150
>gi|115443272|ref|XP_001218443.1| hypothetical protein ATEG_09821 [Aspergillus terreus NIH2624]
gi|114188312|gb|EAU30012.1| hypothetical protein ATEG_09821 [Aspergillus terreus NIH2624]
Length = 195
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 5/162 (3%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E VL
Sbjct: 1 MPKDFSAHQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQHGMRRTCEGVL 60
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + +I G K++L +L+ + +G D
Sbjct: 61 VCHEHNHPHVLMLQIANAFFKLPGDYLHFEDEEIDGFKKRLNERLAPVGSQFSGEGVNED 120
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLP 165
WE+G+ + WW+P+FET ++P+ P +V RPKEC KL+ ++LP
Sbjct: 121 WEIGDTIAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLP 162
>gi|444725590|gb|ELW66151.1| Chromodomain-helicase-DNA-binding protein 9 [Tupaia chinensis]
Length = 1142
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+ +YPL++Y FG+KE + KD ++ R M+ + G+R VE +L+V + PH+LL
Sbjct: 96 ISLYPLTNYTFGTKEPLYEKDSSVAARFQHMREEFYKIGMRRTVEGILIVHEHRLPHVLL 155
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L PGE ++ GLK +T ++ +N+ +W + +C+G WW+P+FE
Sbjct: 156 LQLGTTFFKLPGGELNPGEDEVEGLKHLMT-EIWVNK-----EWVIDDCIGNWWRPNFEP 209
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P ++ +PKE KLFLV+L F VPKN KL+A L ++++N
Sbjct: 210 PQYPYTPAHITKPKEYKKLFLVQLQEKALFIVPKNYKLVAAQLFKLYDN 258
>gi|12848967|dbj|BAB28154.1| unnamed protein product [Mus musculus]
Length = 180
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKL 164
+PY P ++ +PKE KLFLV+L
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQL 179
>gi|189210068|ref|XP_001941366.1| cleavage and polyadenylation specificity factor subunit 5
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977459|gb|EDU44085.1| cleavage and polyadenylation specificity factor subunit 5
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 261
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 22/188 (11%)
Query: 10 PINGSDRNGY---VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEA 66
P+ D NG + ++PLS+Y FG+K+ P +D ++ R+ R++ +Y HG+R E
Sbjct: 15 PVIPKDFNGNQPKTIRLFPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEG 74
Query: 67 VLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGE 121
+L+ N+ FKLPG LR + +I G K +L +L+ +G
Sbjct: 75 ILIA--------------NAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVN 120
Query: 122 VDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAV 181
+W VG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAV
Sbjct: 121 DEWVVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAV 180
Query: 182 PLCQIHEN 189
PL ++++N
Sbjct: 181 PLFELYDN 188
>gi|58269392|ref|XP_571852.1| hypothetical protein CNG01010 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114299|ref|XP_774397.1| hypothetical protein CNBG3780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257032|gb|EAL19750.1| hypothetical protein CNBG3780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228088|gb|AAW44545.1| hypothetical protein CNG01010 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 229
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 115/210 (54%), Gaps = 35/210 (16%)
Query: 15 DRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV---- 70
D ++ +PL +Y F +E P +D ++ NR+ R++ Y G R VEA+++V
Sbjct: 3 DNTHDTIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVTVGN 62
Query: 71 -------------ELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL-- 115
++ H+L+LQV N+ +KLPGG L P ESD GL +L +L +
Sbjct: 63 SISPSRALLNLPVQVHGFAHVLVLQVANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPV 122
Query: 116 ------NEDG----------GEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKL 159
+ED G DWEV +CL +W++P F+T L+PY P +V PKEC KL
Sbjct: 123 TTLKGKDEDDLPRTVWLAPEGGRDWEVRDCLSVWYRPHFDTFLYPYAPAHVSYPKECKKL 182
Query: 160 FLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+LV LP ++ F VP N+KL A+P+ + ++N
Sbjct: 183 YLVNLPPNKTFAVPANMKLHAIPIFEFYDN 212
>gi|328716667|ref|XP_003246005.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Acyrthosiphon pisum]
Length = 203
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPLS+Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V PH+LL
Sbjct: 42 INLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPHVLL 101
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ+ + FKLPGG L P E ++ GLKR LT L +DG + +W V + +G WW+P+FE
Sbjct: 102 LQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLG-RQDGVQPEWTVEDTIGNWWRPNFEP 160
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLP 165
+PY PP++ +PKE +LFLV+LP
Sbjct: 161 PTYPYIPPHITKPKEHKRLFLVQLP 185
>gi|195127095|ref|XP_002008004.1| GI12073 [Drosophila mojavensis]
gi|195376959|ref|XP_002047260.1| GJ13342 [Drosophila virilis]
gi|193919613|gb|EDW18480.1| GI12073 [Drosophila mojavensis]
gi|194154418|gb|EDW69602.1| GJ13342 [Drosophila virilis]
Length = 203
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Query: 4 EMGASVPINGSDRNG--------YVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNY 55
+ AS+ NG+ + +++YPL++Y FG+KE + KD ++ +R RM+ +
Sbjct: 22 QADASISNNGTQKYAPNQALTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEF 81
Query: 56 DAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115
D G+R VE VLLV PH+LLLQ+ + FKLPGG L GE ++ GLKR L+ L
Sbjct: 82 DRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLG- 140
Query: 116 NEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKL 164
+DG + DW V + +G WW+P+FE +PY PP++ +PKE +LFLV+L
Sbjct: 141 RQDGVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQL 189
>gi|195015476|ref|XP_001984210.1| GH15136 [Drosophila grimshawi]
gi|193897692|gb|EDV96558.1| GH15136 [Drosophila grimshawi]
Length = 203
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ +R RM+ +D G+R VE VLLV PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR L+ L +DG + DW V + +G WW+P+FE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLG-RQDGVKQDWIVEDTIGNWWRPNFE 164
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKL 164
+PY PP++ +PKE +LFLV+L
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQL 189
>gi|195427341|ref|XP_002061735.1| GK17156 [Drosophila willistoni]
gi|194157820|gb|EDW72721.1| GK17156 [Drosophila willistoni]
Length = 205
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ +R RM+ +D G+R VE VLLV PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR L+ L +DG + DW V + +G WW+P+FE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVDGLKRLLSETLG-RQDGVKQDWIVEDTIGNWWRPNFE 164
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVP 182
+PY PP++ +PKE +LFLV+L +K +N VP
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQL--HEKDDTDRNASYYDVP 205
>gi|270016492|gb|EFA12938.1| hypothetical protein TcasGA2_TC010485 [Tribolium castaneum]
Length = 187
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
++++YPL++Y FG+KE + KD ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 38 IINLYPLTNYIFGTKEPLFEKDPSVPARFQRMRDEFERIGMRRSVEGVLLVHEHGLPHVL 97
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR LT L DG + DW V + +G WW+P+FE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLG-RLDGVKQDWLVEDIIGNWWRPNFE 156
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKL 164
+PY PP++ +PKE +LFLV+L
Sbjct: 157 PPQYPYIPPHITKPKEHKRLFLVQL 181
>gi|125980546|ref|XP_001354297.1| GA17613 [Drosophila pseudoobscura pseudoobscura]
gi|54642603|gb|EAL31350.1| GA17613 [Drosophila pseudoobscura pseudoobscura]
Length = 198
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 108/180 (60%), Gaps = 17/180 (9%)
Query: 1 MSDEMGASVPINGSDRNG----------------YVVDIYPLSSYYFGSKEAIPFKDETL 44
+S++ G+ P+ GS N V++YPL++Y FG+KE + KD ++
Sbjct: 6 VSNKSGSGWPLRGSASNNNNGTQKFAANQALTINRTVNLYPLTNYTFGTKEPLFEKDPSV 65
Query: 45 YNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYG 104
+R RM+ +D G+R VE VLLV PH+LLLQ+ + FKLPGG L GE ++ G
Sbjct: 66 PSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVDG 125
Query: 105 LKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKL 164
LKR L+ L +DG + +W V + +G WW+P+FE +PY PP++ +PKE +LFLV+L
Sbjct: 126 LKRLLSETLG-RQDGVKQEWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQL 184
>gi|324511146|gb|ADY44649.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 162
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Query: 51 MKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLT 110
M+ Y+ G+R VE VLLV PH+LLLQ+ + FKLPGG L PGE +I GLKR LT
Sbjct: 1 MREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEIDGLKRLLT 60
Query: 111 RKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKF 170
L +DG + W + + +G WW+P+F+ +PY P +V +PKE TKLFLV+LP F
Sbjct: 61 ETLG-RQDGTKDLWTIEDAIGNWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALF 119
Query: 171 FVPKNLKLLAVPLCQIHEN 189
VPKN KL+A PL ++++N
Sbjct: 120 AVPKNYKLVAAPLFELYDN 138
>gi|195167841|ref|XP_002024741.1| GL22627 [Drosophila persimilis]
gi|194108146|gb|EDW30189.1| GL22627 [Drosophila persimilis]
Length = 242
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 124/218 (56%), Gaps = 29/218 (13%)
Query: 1 MSDEMGASVPINGSDRNG----------------YVVDIYPLSSYYFGSKEAIPFKDETL 44
+S++ G+ P+ GS N V++YPL++Y FG+KE + KD ++
Sbjct: 6 VSNKSGSGWPLRGSASNNNNGTQKFAANQALTINRTVNLYPLTNYTFGTKEPLFEKDPSV 65
Query: 45 YNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYG 104
+R RM+ +D G+R VE VLLV PH+LLLQ+ + FKLPGG L GE ++ G
Sbjct: 66 PSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVDG 125
Query: 105 LKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKL 164
LKR L+ L +DG + +W V + +G WW+P+FE +PY PP++ +PKE +LFLV+L
Sbjct: 126 LKRLLSETLG-RQDGVKQEWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQL 184
Query: 165 PVSQKFFVPKNLK-----------LLAVPLCQIHENHK 191
+ + + L+ L+A PL ++++N +
Sbjct: 185 H-EKGYGQERQLRCTLSRSISAVLLVAAPLFELYDNSQ 221
>gi|194751375|ref|XP_001958002.1| GF10694 [Drosophila ananassae]
gi|190625284|gb|EDV40808.1| GF10694 [Drosophila ananassae]
Length = 204
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ +R RM+ +D G+R VE VLLV PH+L
Sbjct: 47 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 106
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR L+ L +DG + +W V + +G WW+P+FE
Sbjct: 107 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLG-RQDGVKQEWIVEDTIGNWWRPNFE 165
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKL 164
+PY PP++ +PKE +LFLV+L
Sbjct: 166 PPQYPYIPPHITKPKEHKRLFLVQL 190
>gi|21355361|ref|NP_648308.1| CG3689, isoform B [Drosophila melanogaster]
gi|194867856|ref|XP_001972161.1| GG15373 [Drosophila erecta]
gi|195326297|ref|XP_002029866.1| GM25145 [Drosophila sechellia]
gi|195490860|ref|XP_002093317.1| GE20835 [Drosophila yakuba]
gi|195589025|ref|XP_002084257.1| GD14179 [Drosophila simulans]
gi|17862918|gb|AAL39936.1| SD03330p [Drosophila melanogaster]
gi|23093817|gb|AAF50278.2| CG3689, isoform B [Drosophila melanogaster]
gi|190653944|gb|EDV51187.1| GG15373 [Drosophila erecta]
gi|194118809|gb|EDW40852.1| GM25145 [Drosophila sechellia]
gi|194179418|gb|EDW93029.1| GE20835 [Drosophila yakuba]
gi|194196266|gb|EDX09842.1| GD14179 [Drosophila simulans]
gi|220946996|gb|ACL86041.1| CG3689-PB [synthetic construct]
gi|220956536|gb|ACL90811.1| CG3689-PB [synthetic construct]
Length = 203
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ +R RM+ +D G+R VE VLLV PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L GE ++ GLKR L+ L +DG + +W V + +G WW+P+FE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLG-RQDGVKQEWIVEDTIGNWWRPNFE 164
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKL 164
+PY PP++ +PKE +LFLV+L
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQL 189
>gi|384492027|gb|EIE83223.1| hypothetical protein RO3G_07928 [Rhizopus delemar RA 99-880]
Length = 157
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
Query: 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN--- 116
+R VEAVL+V HPH+L+ Q+ NS FKLPG L PG + GLK L ++L
Sbjct: 1 MRRSVEAVLVVHQHNHPHVLMFQIANSFFKLPGHYLEPGVEETEGLKEILNKRLGPEDPL 60
Query: 117 EDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNL 176
E +DW VGECL WW+P++E ++PY P +V PKE L+++ LP +++ FVPKN+
Sbjct: 61 EWDSNIDWSVGECLSTWWRPNYENYMYPYIPAHVTNPKEKKSLYIIHLPPNKELFVPKNM 120
Query: 177 KLLAVPLCQIHEN 189
KLLAVPL ++++N
Sbjct: 121 KLLAVPLFELYDN 133
>gi|443690873|gb|ELT92890.1| hypothetical protein CAPTEDRAFT_121873, partial [Capitella teleta]
Length = 179
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPL++Y FG+KEA+ KD ++ R RM+ + +G+R E VL+V PH+L
Sbjct: 33 TISLYPLTNYTFGTKEALYEKDASVQERFKRMRQEFADNGMRRTAEGVLIVHEHGLPHVL 92
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L+ GE GLKR LT L +D DW + + +G WW+P+FE
Sbjct: 93 LLQLGTTFFKLPGGELKNGEDQTEGLKRLLTEMLG-RQDQAPTDWTIEDTIGNWWRPNFE 151
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLP 165
+PY P ++ +PKE +LFLV+LP
Sbjct: 152 PPQYPYIPAHITKPKEHKRLFLVQLP 177
>gi|238231501|ref|NP_001154164.1| cleavage and polyadenylation specificity factor subunit 5
[Oncorhynchus mykiss]
gi|225704506|gb|ACO08099.1| Cleavage and polyadenylation specificity factor 5 [Oncorhynchus
mykiss]
Length = 213
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 103/170 (60%), Gaps = 18/170 (10%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG +I G +DG + DW + + +G WW+P+FE
Sbjct: 99 LLQLGTTFFKLPGG-------EILG-----------RQDGVKQDWVIDDSIGNWWRPNFE 140
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+ P ++ +PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 141 PPQYPHIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 190
>gi|154300626|ref|XP_001550728.1| hypothetical protein BC1G_10901 [Botryotinia fuckeliana B05.10]
Length = 204
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Query: 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----L 115
RTC E +L+ HPH+L+LQ+ N+ FKLPG L+P + ++ G K++L +L+
Sbjct: 3 RTC-EGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQF 61
Query: 116 NEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKN 175
+ +G +WE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN
Sbjct: 62 SGEGVNEEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPKN 121
Query: 176 LKLLAVPLCQIHEN 189
+KLLAVPL ++++N
Sbjct: 122 MKLLAVPLFELYDN 135
>gi|332376679|gb|AEE63479.1| unknown [Dendroctonus ponderosae]
Length = 234
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
++ +YPL++Y FG+KE + +D ++ R RM+ ++ G+R VE VLLV PH+L
Sbjct: 56 IIKLYPLTNYIFGTKEPLFERDPSVPARFQRMRDEFEKIGMRRSVEGVLLVHEHGLPHVL 115
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR LT L DG + +W V + +G WW+P+FE
Sbjct: 116 LLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLG-RLDGVKQEWHVEDIIGNWWRPNFE 174
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKL 164
+PY P ++ +PKE +LFLV+L
Sbjct: 175 PPQYPYIPSHITKPKEHKRLFLVQL 199
>gi|224142912|ref|XP_002324776.1| predicted protein [Populus trichocarpa]
gi|222866210|gb|EEF03341.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 75/94 (79%), Gaps = 3/94 (3%)
Query: 99 ESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTK 158
+I GLKRKL+ S+N DG + WEVG+CLGMWW+ DFET+L PY P NVK PKEC K
Sbjct: 26 SDNIDGLKRKLSS--SVNGDGTD-HWEVGDCLGMWWRSDFETMLLPYLPHNVKVPKECMK 82
Query: 159 LFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKV 192
L+LV+ P S+KF VPKNLKLLAVPLCQ+HENHK+
Sbjct: 83 LYLVRFPESRKFIVPKNLKLLAVPLCQVHENHKL 116
>gi|225679184|gb|EEH17468.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides brasiliensis Pb03]
Length = 262
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 104/175 (59%), Gaps = 21/175 (12%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VLL+
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLLL--------- 78
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
I+ PG L + ++ G K +L +L+ + G +WE+G+ L WW
Sbjct: 79 -------IYGRPGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQWW 131
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++N
Sbjct: 132 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDN 186
>gi|357621873|gb|EHJ73547.1| cleavage and polyadenylation specific factor 5 [Danaus plexippus]
Length = 161
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 51 MKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLT 110
M+ + G+R VE VLLV PH+LLLQ+ + FKLPGG L PGE +I GLKR LT
Sbjct: 1 MREEFAKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIEGLKRLLT 60
Query: 111 RKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKF 170
L +DG + +W + + +G WW+P+FE +PY PP++ +PKE +LFLV+L F
Sbjct: 61 ETLG-RQDGVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALF 119
Query: 171 FVPKNLKLLAVPLCQIHENHK 191
VPKN KL+A PL ++++N +
Sbjct: 120 AVPKNYKLVAAPLFELYDNAQ 140
>gi|378726617|gb|EHY53076.1| autocrine motility factor receptor, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 220
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-LNEDG 119
RTC E +L+ HPH+L+LQ+ N+ FKLPG L +I G K +L +L+ N
Sbjct: 3 RTC-EGILVCHEHNHPHVLMLQIANAFFKLPGDYLPHDADEIEGFKMRLNERLAPTNPKE 61
Query: 120 GEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLL 179
G+ +WE+G+CL WW+P+ ET L+P+ P +V RPKE KL+L+ LP ++ VPKN+KLL
Sbjct: 62 GDTEWEIGDCLAQWWRPNHETFLYPFLPAHVSRPKELKKLYLIHLPPNKVLSVPKNMKLL 121
Query: 180 AVPLCQIHEN 189
AVPL ++++N
Sbjct: 122 AVPLFELYDN 131
>gi|259480797|tpe|CBF73767.1| TPA: cleavage and polyadenylation specific factor 5
(AFU_orthologue; AFUA_5G02030) [Aspergillus nidulans
FGSC A4]
Length = 275
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E +L
Sbjct: 17 APKDFSAKQPETIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGIL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + +I G KR+L +L+ + +G D
Sbjct: 77 VCHEHNHPHVLMLQIANAFFKLPGDYLLHDDDEIEGFKRRLNERLAPVGSQFSGEGVNED 136
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WE+G+ L WW+P+FET + C ++ ++ VPKN+KLLAVPL
Sbjct: 137 WEIGDTLAQWWRPNFETFIKDQMSLVGHDMLMCLRV------AAEVLSVPKNMKLLAVPL 190
Query: 184 CQIHENHK 191
++++N++
Sbjct: 191 FELYDNNQ 198
>gi|67902116|ref|XP_681314.1| hypothetical protein AN8045.2 [Aspergillus nidulans FGSC A4]
gi|40740477|gb|EAA59667.1| hypothetical protein AN8045.2 [Aspergillus nidulans FGSC A4]
Length = 297
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 21/193 (10%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ HG+R E +L
Sbjct: 39 APKDFSAKQPETIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGIL 98
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ HPH+L+LQ+ N+ FKLPG L + +I G KR+L +L+ + +G D
Sbjct: 99 VCHEHNHPHVLMLQIANAFFKLPGDYLLHDDDEIEGFKRRLNERLAPVGSQFSGEGVNED 158
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKL----FLVKLPVSQKFF-VPKNLKL 178
WE+G+ L WW+P+FET + K+ L L+ L V+ + VPKN+KL
Sbjct: 159 WEIGDTLAQWWRPNFETFI-----------KDQMSLVGHDMLMCLRVAAEVLSVPKNMKL 207
Query: 179 LAVPLCQIHENHK 191
LAVPL ++++N++
Sbjct: 208 LAVPLFELYDNNQ 220
>gi|196012174|ref|XP_002115950.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190581726|gb|EDV21802.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 174
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 40 KDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGE 99
K ++ R RMK Y G+R VE VL+V + PH+LLLQ+ + FKLP L PGE
Sbjct: 3 KTGSVAARFQRMKEEYQTKGMRRTVEGVLIVHEHRLPHILLLQLGTTFFKLPSTELAPGE 62
Query: 100 SDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKL 159
S++ GLKR L L N DG E +W + + L +W+P+FE +PY P ++ +PKE +L
Sbjct: 63 SEVEGLKRGLNEILGRN-DGVEQEWLIEDLLCNYWRPNFEAAQYPYVPAHITKPKEQRRL 121
Query: 160 FLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
FLV+L F VPKN KL+A P+ ++++N
Sbjct: 122 FLVQLAEKALFAVPKNYKLVAAPVFELYDN 151
>gi|444725613|gb|ELW66174.1| E3 ubiquitin-protein ligase AMFR [Tupaia chinensis]
Length = 861
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+LLLQ
Sbjct: 148 LYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQ 207
Query: 83 VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLL 142
+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 208 LGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE--- 263
Query: 143 FPYFPPNVKRPKECTKLFLVKLPVSQKFFVP 173
PP V C L LV + F P
Sbjct: 264 ----PPQVLVNTACCVLMLVAKLIQCIVFGP 290
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+LL
Sbjct: 79 INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 138
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS 114
LQ+ + FK L P + +G K L K S
Sbjct: 139 LQLGTTFFK-----LYPLTNYTFGTKEPLYEKDS 167
>gi|326483143|gb|EGE07153.1| cleavage and polyadenylation specificity factor subunit 5
[Trichophyton equinum CBS 127.97]
Length = 250
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 29/186 (15%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 IPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ L +I G K +L +L+ +G D
Sbjct: 77 QM------------------------LSSNYDEIEGFKARLNERLAPVGSQFTGEGVNED 112
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 113 WEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPL 172
Query: 184 CQIHEN 189
++++N
Sbjct: 173 FELYDN 178
>gi|326475545|gb|EGD99554.1| cleavage and polyadenylation specific factor 5 [Trichophyton
tonsurans CBS 112818]
Length = 250
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 29/186 (15%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E VL
Sbjct: 17 IPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL 76
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVD 123
+ L +I G K +L +L+ +G D
Sbjct: 77 QM------------------------LSSNYDEIEGFKARLNERLAPVGSQFTGEGVNED 112
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
WEVG+ L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL
Sbjct: 113 WEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPL 172
Query: 184 CQIHEN 189
++++N
Sbjct: 173 FELYDN 178
>gi|321261305|ref|XP_003195372.1| hypothetical protein CGB_G5350W [Cryptococcus gattii WM276]
gi|317461845|gb|ADV23585.1| Hypothetical protein CGB_G5350W [Cryptococcus gattii WM276]
Length = 205
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 23/189 (12%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
++ +PL +Y F +E P +D ++ NR+ R++ Y G R VEA+++V++ +
Sbjct: 4 TIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVKV----GIS 59
Query: 80 LLQVRNSIFK-LPGGRLRPGESDIYGLKRKLTRKLSL--------NEDG----------G 120
L R + PGG L P ESD GL +L +L + +ED G
Sbjct: 60 LGSSRALLIPPFPGGHLDPSESDAEGLITRLNEQLGVPVTTLKGKSEDDLPRTVWLAPEG 119
Query: 121 EVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLA 180
DWEV +CL +W++P F+T L+PY P +V PKEC K++LV LP ++ F VP N+KL A
Sbjct: 120 GRDWEVRDCLSIWYRPHFDTFLYPYAPAHVSYPKECKKIYLVNLPPNKTFAVPANMKLHA 179
Query: 181 VPLCQIHEN 189
+P+ + ++N
Sbjct: 180 IPIFEFYDN 188
>gi|258571347|ref|XP_002544477.1| hypothetical protein UREG_03994 [Uncinocarpus reesii 1704]
gi|237904747|gb|EEP79148.1| hypothetical protein UREG_03994 [Uncinocarpus reesii 1704]
Length = 253
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 103/181 (56%), Gaps = 28/181 (15%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
+P + S + + +YPLS+Y FG+KE P +D ++ R+ R++ +Y+ +G+R E V
Sbjct: 27 IPKSFSAKQPPTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGV- 85
Query: 69 LVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGE 128
LVE FK +L RL P S G +G DWEVG+
Sbjct: 86 LVEGFKA-------------RL-NERLAPVGSQFTG-------------EGVNEDWEVGD 118
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188
L WW+P+FET ++P+ P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++
Sbjct: 119 TLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYD 178
Query: 189 N 189
N
Sbjct: 179 N 179
>gi|406698531|gb|EKD01766.1| hypothetical protein A1Q2_03829 [Trichosporon asahii var. asahii
CBS 8904]
Length = 237
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+D++P+ +Y F + P +D ++ R+ R++ YD G+R V+AV++ P +
Sbjct: 17 IDLHPVQNYTFLNTSVQPEEDSSVAERMRRLQDQYDETGMRRSVDAVIVCHDHGVPCIFT 76
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVD---WEVGECLGMWWKPD 137
Q+ N FKLPGG L P E D+ G+ R L L D W V L +W++P+
Sbjct: 77 FQIANDFFKLPGGYLDPSEDDVEGISRLLEEFLGTGSKQWRSDQPNWTVRSLLAVWYRPN 136
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
F+ +FP +V PKEC K+FLV + Q VP N+KLLA+P+ + ++N +
Sbjct: 137 FDG----FFPAHVSMPKECRKIFLVTMAPEQMLGVPLNMKLLAIPIHEFYDNTQ 186
>gi|401886579|gb|EJT50606.1| hypothetical protein A1Q1_08158 [Trichosporon asahii var. asahii
CBS 2479]
Length = 237
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+D++P+ +Y F + P +D ++ R+ R++ YD G+R V+AV++ P +
Sbjct: 17 IDLHPVQNYTFLNTSVQPEEDSSVAERMRRLQDQYDETGMRRSVDAVIVCHDHGVPCIFT 76
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVD---WEVGECLGMWWKPD 137
Q+ N FKLPGG L P E D+ G+ R L L D W V L +W++P+
Sbjct: 77 FQIANDFFKLPGGYLDPSEDDVEGISRLLEEFLGTGSKQWRSDQPNWTVRSLLAVWYRPN 136
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
F+ +FP +V PKEC K+FLV + Q VP N+KLLA+P+ + ++N +
Sbjct: 137 FDG----FFPAHVSMPKECRKIFLVTMTPEQMLGVPLNMKLLAIPIHEFYDNTQ 186
>gi|118488203|gb|ABK95921.1| unknown [Populus trichocarpa]
Length = 148
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VV+ YPLSSY FG+KE KD ++ +R+ RMK NY G+RT VEA+LLV+ HPH+L
Sbjct: 8 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEV 126
LLQ+ N+ KLPGGRL+PGE++ GLKRKLT KL N DW++
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQL 114
>gi|426382295|ref|XP_004057743.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Gorilla gorilla gorilla]
Length = 182
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 13/158 (8%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
LLQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C+G WW+P+FE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGVLQDWVIDDCIGNWWRPNFE 154
Query: 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLK 177
PP V +L+L+ + ++ F + K
Sbjct: 155 -------PPQV-----SVQLYLLGILEAESSFNSSHFK 180
>gi|407926085|gb|EKG19056.1| hypothetical protein MPH_03746 [Macrophomina phaseolina MS6]
Length = 182
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWW 134
+LQ+ N+ FKLPG LRP + +I G K +L +L+ +G +W++G+ L WW
Sbjct: 1 MLQIANAFFKLPGDYLRPEDDEIDGFKARLNERLAPVGSQFTGEGVNDEWQIGDTLAQWW 60
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+P+FET ++P+ P +V RPKEC KL+ ++LP S+ VPKN+KLLAVPL ++++N
Sbjct: 61 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDN 115
>gi|71012907|ref|XP_758540.1| hypothetical protein UM02393.1 [Ustilago maydis 521]
gi|46098198|gb|EAK83431.1| hypothetical protein UM02393.1 [Ustilago maydis 521]
Length = 258
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 65/235 (27%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YP++++ F +K+A P +D ++ R+ R+++NY+ G+R VEAVL+V HPH+L
Sbjct: 4 TLTLYPVTAFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVL 63
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL---------------SLNEDGGEVDW 124
+LQ+ N+ FKLPG L+PGE ++ G+K +L +L N+D G DW
Sbjct: 64 MLQIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDDG--DW 121
Query: 125 EVGECLGMWWKPDFETLL------------------FPYFPPN---VKRPKECTKLF--- 160
E+ +CL WW+P+FET + P V P T F
Sbjct: 122 EIQDCLAQWWRPNFETFMTVSVCTTTCHQAERVQEALPRHHSTYQYVSTPSALTSQFPLS 181
Query: 161 -------------LVKLPV-----------SQKFFVPKNLKLLAVPLCQIHENHK 191
L L V ++ VPKN+KLLAVPL ++++N +
Sbjct: 182 EITHSHSTRPICLLADLHVLANPSAFSLRHAEVLAVPKNMKLLAVPLFELYDNSQ 236
>gi|290983965|ref|XP_002674698.1| nudix motif 21-like protein [Naegleria gruberi]
gi|284088290|gb|EFC41954.1| nudix motif 21-like protein [Naegleria gruberi]
Length = 205
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 106/177 (59%), Gaps = 7/177 (3%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
VVDIY + + K KD+++ R+ R+++NY HG++ VEA + V + HPH++
Sbjct: 6 VVDIYDYTFIKWTKKNPQVEKDKSVPERLKRLENNYLTHGMKRTVEAAIAVNIHGHPHIM 65
Query: 80 LLQVRNS---IFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV--DWEVGECLGMWW 134
LL++ NS KLPGGR R E++ LKRKLT++L+ ED E+ +W V + +W+
Sbjct: 66 LLRIGNSQKGFHKLPGGRCRRDETEEECLKRKLTKRLA-PEDPNEIMPEWIVHGVVSVWY 124
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
+P+FE +PY P ++ +PKE ++LV +P + P+N + +P ++EN K
Sbjct: 125 RPNFENSFYPYLPAHITKPKERKLIYLVTIPECTIAY-PRNYDFIPMPFFDLYENSK 180
>gi|89267099|emb|CAJ41963.1| hypothetical protein UHO_0263 [Ustilago hordei]
Length = 145
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 86/135 (63%), Gaps = 17/135 (12%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
++P++S+ F +K+A P +D ++ R+ R+++NY+ G+R VEAVL+V HPH+L+LQ
Sbjct: 7 LHPVTSFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVLMLQ 66
Query: 83 VRNSIFKLPGGRLRPGESDIYGLKRKLTRKL---------------SLNEDGGEVDWEVG 127
+ N+ FKLPG L+PGE ++ G+K +L +L N+D GE WE+
Sbjct: 67 IANAFFKLPGDYLKPGEDEVEGMKARLDERLGPVESDPNSFGPNGEGRNKDDGE--WEIQ 124
Query: 128 ECLGMWWKPDFETLL 142
+CL WW+P+FET +
Sbjct: 125 DCLAQWWRPNFETFM 139
>gi|405121948|gb|AFR96716.1| cleavage and polyadenylation specific factor 5 [Cryptococcus
neoformans var. grubii H99]
Length = 218
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 41/195 (21%)
Query: 15 DRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFK 74
D ++ +PL +Y F +E P +D ++ NR+ R++ Y G R VEA+++V +
Sbjct: 3 DNTHNTIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYTESGTRRSVEAIMVVTVHG 62
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL------------------- 115
PH+L+LQV N+ +KLPGG L P ESD GL +L +L +
Sbjct: 63 FPHVLVLQVANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTTFKGKGEDDLPHTVWL 122
Query: 116 -NEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPK 174
E+G DWEV +CL +W++P F+T + Y + F VP
Sbjct: 123 APEEGR--DWEVRDCLSVWYRPHFDTFILTYLS-------------------VETFAVPA 161
Query: 175 NLKLLAVPLCQIHEN 189
N+KL A+P+ + ++N
Sbjct: 162 NMKLHAIPVFEFYDN 176
>gi|397498824|ref|XP_003820174.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Pan paniscus]
Length = 258
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 19 YVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVE--AVLLVELFKHP 76
+ + +YP+ +Y FG+KE + KD ++ +R +M+ D G+R+ +E + L L
Sbjct: 49 HTIKLYPIINYTFGTKEPLYEKDSSVSSRFQQMREELDKIGMRSNIEGDSDCLQALVWLL 108
Query: 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKP 136
++LLL + + FKLP G L PG+ ++ GLK +T LS ++DG D +G C+G WW+P
Sbjct: 109 YVLLLLLGATFFKLPDGELSPGKGEVEGLKCLMTGILS-HQDGVLKDARLGHCIGNWWRP 167
Query: 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P + +PKE KLFL +L F + KN KL+A PL +++ N
Sbjct: 168 -----XYPYIPVYITKPKEHKKLFLAQLQEKALFAISKNYKLIATPLFELYNN 215
>gi|412994192|emb|CCO14703.1| Cleavage and polyadenylation specificity factor subunit 5
[Bathycoccus prasinos]
Length = 345
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 35/178 (19%)
Query: 47 RVLRMKSNYDAHG--LRTCVEAVLLVELFKHPHLLLLQ---------------------- 82
R+ R++ Y+ G R V V +V PH+LLLQ
Sbjct: 141 RLRRIREQYEKSGGIARRSVAGVCVVNQHGCPHVLLLQESTLPPGAQQRTADGKPASQWD 200
Query: 83 -------VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSL----NEDGGEVDWEVGECLG 131
S F+LPGGRLR GE GLKRKL KL+ NE +++ + L
Sbjct: 201 RPGQHFSASTSTFRLPGGRLRAGEGTTEGLKRKLANKLAAPNESNEANLRASFDILDQLS 260
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
W++ FE ++PY PP+V +PKE ++FLV+LP F VPK KL+AVP+ ++++N
Sbjct: 261 TWYRIGFEPQMYPYLPPHVTKPKETLEVFLVELPEKCYFAVPKTSKLVAVPIFELYDN 318
>gi|351703336|gb|EHB06255.1| Cleavage and polyadenylation specificity factor subunit 5
[Heterocephalus glaber]
Length = 209
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+LL
Sbjct: 45 INLYPLTNYTFGTKEPLCEKDSSVAARFQRMREEFDRIGMRRAVEGVLIVHEHRLPHVLL 104
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGEC 129
LQ+ + FKLPGG L PGE ++ GLKR +T L +DG DW + +C
Sbjct: 105 LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILG-RQDGALQDWVIDDC 152
>gi|302501895|ref|XP_003012939.1| hypothetical protein ARB_00821 [Arthroderma benhamiae CBS 112371]
gi|291176500|gb|EFE32299.1| hypothetical protein ARB_00821 [Arthroderma benhamiae CBS 112371]
Length = 195
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
Query: 91 PGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWWKPDFETLLFPY 145
PG L+ + +I G K +L +L+ +G DWEVG+ L WW+P+FET ++P+
Sbjct: 20 PGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWWRPNFETFMYPF 79
Query: 146 FPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++N
Sbjct: 80 LPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDN 123
>gi|225556923|gb|EEH05210.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
capsulatus G186AR]
Length = 300
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 86/145 (59%), Gaps = 9/145 (6%)
Query: 53 SNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKL---PGGRLRPGESDIYGLKRKL 109
S+ A+ L T + A L +E+ K +++ + + PG L + ++ G K +L
Sbjct: 74 SSRRANQLHTEI-ASLDLEIRKREERDRIEITATALQSSNPPGDYLHHDDDEVEGFKTRL 132
Query: 110 TRKLS-----LNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKL 164
+L+ + +G DWE+G+ L WW+P+FET ++P+ P +V RPKEC KL+ ++L
Sbjct: 133 NERLAPVGSQFSGEGVNDDWEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQL 192
Query: 165 PVSQKFFVPKNLKLLAVPLCQIHEN 189
P + VPKN+KLLAVPL ++++N
Sbjct: 193 PKKKVLSVPKNMKLLAVPLFELYDN 217
>gi|226290895|gb|EEH46323.1| insulin-degrading enzyme [Paracoccidioides brasiliensis Pb18]
Length = 1374
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 5/104 (4%)
Query: 91 PGGRLRPGESDIYGLKRKLTRKLS-----LNEDGGEVDWEVGECLGMWWKPDFETLLFPY 145
PG L + ++ G K +L +L+ + G +WE+G+ L WW+P+FET ++P+
Sbjct: 1195 PGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQWWRPNFETFMYPF 1254
Query: 146 FPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
P +V RPKEC KL+ ++LP + VPKN+KLLAVPL ++++N
Sbjct: 1255 LPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDN 1298
>gi|326431994|gb|EGD77564.1| hypothetical protein PTSG_08662 [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
VDI+P S+Y ++ + +++ + ++ GL ++ V+LVE HPH+LL
Sbjct: 8 VDIFPNSNYKILKDDSKTEPKSAMDEKLMALMHKFNETGLVETMQLVMLVEQHGHPHVLL 67
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140
LQ LP ++P E+ + R L + + E + + + +WW+P FE
Sbjct: 68 LQPHPKFSLLPHTEIKPDETSKETVHRILQEQFQVAEPALN-QFRIVDLAAVWWRPHFEQ 126
Query: 141 LLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY PP+V +PKE ++ LV++P S F VP N + AVPL ++++N
Sbjct: 127 PTYPYQPPHVTKPKERIQVVLVQMPESCDFVVPGNGNVRAVPLIELYDN 175
>gi|170589621|ref|XP_001899572.1| pre-mrna cleavage factor [Brugia malayi]
gi|158593785|gb|EDP32380.1| pre-mrna cleavage factor, putative [Brugia malayi]
Length = 220
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 1 MSDEMGASVPINGSDRN-----GYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNY 55
M+ G+ S++N V+ +YPL++Y + + Y + L+++ Y
Sbjct: 1 MTTVTGSKFSTVSSEKNERRCMSSVIRLYPLTNYSVQNNDYEDPPQIFDYKQSLKLRQQY 60
Query: 56 DAHGLRTCVEAVLLVELFKHPHLLLL-----QVRNSIFKLPGGRLRPGESDIYGLKRKLT 110
+ +G+ V+ VLL H+LLL Q+++S KLP L E +I G+KR +
Sbjct: 61 ENNGMIRTVQGVLLGHQNSIIHVLLLKNGVGQIQSS--KLPEVTLYNSEDEIDGMKRLMA 118
Query: 111 RKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKF 170
+ +D E ++ WW+P+FE ++PY P ++ +PKE K+F+V+LP F
Sbjct: 119 EVMGF-KDTAEAVCQIQHVAAKWWRPNFEESIYPYIPSHITKPKEMIKVFVVELPKQTTF 177
Query: 171 FVPKNLKLLAVPLCQIHEN 189
+ KN L+A P+ +I+ N
Sbjct: 178 TIAKNNALIAAPVFEIYNN 196
>gi|312073725|ref|XP_003139649.1| pre-mRNA cleavage factor [Loa loa]
gi|307765185|gb|EFO24419.1| pre-mRNA cleavage factor [Loa loa]
Length = 228
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 98/178 (55%), Gaps = 14/178 (7%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETL---YNRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
V+ +YPL++Y S + ++D Y + L+++ Y+ G+ V+ VLL
Sbjct: 33 VIRLYPLTNYSVRSND---YEDPPRIFDYKQSLKLRQEYENDGMVRTVQGVLLGHQNSII 89
Query: 77 HLLLL-----QVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131
H+LLL Q+++S KLP L GE +I G+KR + L ED + ++
Sbjct: 90 HVLLLKNGVGQMQSS--KLPEVTLYHGEDEIAGMKRLMAEVLGF-EDAVDAVCQIQHIAA 146
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FE ++PY P ++ +PKE ++F+V+LP F + KN L+A P+ +I++N
Sbjct: 147 KWWRPNFEAPIYPYIPSHITKPKEMIRVFVVELPKKATFTIAKNNTLVAAPVFEIYDN 204
>gi|402587186|gb|EJW81121.1| hypothetical protein WUBG_07970 [Wuchereria bancrofti]
Length = 258
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 14/178 (7%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETL---YNRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
V+ +YPL++Y + + ++D Y + L+++ Y+ +G+ V+ VLL
Sbjct: 25 VIRLYPLTNYSVQNND---YEDPPRIFDYKQSLKLRQQYENNGMIRTVQGVLLGHQNSII 81
Query: 77 HLLLL-----QVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131
H+LLL Q+++S KLP L E +I G+KR + + +D E ++
Sbjct: 82 HVLLLKNGIGQIQSS--KLPEVTLYNSEDEIDGMKRLMAEVMGF-KDTAEAVCQIQHVAA 138
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
WW+P+FE ++PY P ++ +PKE K+F+V+LP F + KN L+A P+ +I+ N
Sbjct: 139 KWWRPNFEASIYPYIPSHITKPKEMIKVFVVELPEQTTFTIAKNNALVAAPVFEIYNN 196
>gi|432102773|gb|ELK30249.1| Cleavage and polyadenylation specificity factor subunit 5 [Myotis
davidii]
Length = 325
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 19 YVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHL 78
+ +++YPL++Y FG+KE + ++D ++ R M+ +D G+R +E VL+V + PH+
Sbjct: 35 HTINLYPLTNYTFGTKEPL-YEDSSVAARFQCMREEFDKIGMRRTIEGVLIVHEHRLPHV 93
Query: 79 LLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECL 130
LLLQ+ + FK PG L PGE ++ GLKR +T L +DG DW + +C+
Sbjct: 94 LLLQLGTTFFKRPGDELNPGEDEVEGLKRLMTEILG-RQDGVLQDWAIDDCI 144
>gi|68068277|ref|XP_676048.1| mRNA cleavage factor-like protein [Plasmodium berghei strain ANKA]
gi|56495563|emb|CAH97001.1| mRNA cleavage factor-like protein, putative [Plasmodium berghei]
Length = 241
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YP SY F E + K + + ++Y+ +G+R V A+LL ++PHLLLLQ
Sbjct: 28 LYPQDSYEFNIDEKLKKKFIIDTEKYKKRINSYNKNGIRNTVIAILLCHRHEYPHLLLLQ 87
Query: 83 -VRNSIFKLPGGRLRPGESDIYGLKRKLTR-------------KLSLNEDGGEVD----- 123
+ + GG+ E LK+KL + KL++N+ G
Sbjct: 88 NLSTQEYYFLGGKYNSWEKPGDVLKKKLQKYINKIQDIHFSVNKLNINDQTGNAKNKDEI 147
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
++VGE LG WWK + ++ Y P +V RPKEC KL+ V +P F +P L A+PL
Sbjct: 148 FDVGEFLGEWWKTQYASVYLSYLPAHVTRPKECAKLYQVTIPDKCIFHLPPGFTLKAIPL 207
>gi|239792840|dbj|BAH72714.1| ACYPI005495 [Acyrthosiphon pisum]
Length = 145
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 21 VDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL 80
+++YPLS+Y FG+KE + KD ++ R RM+ ++ G+R VE VL+V PH+LL
Sbjct: 42 INLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPHVLL 101
Query: 81 LQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG 119
LQ+ + FKLPGG L P E ++ GLKR LT L +DG
Sbjct: 102 LQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLG-RQDG 139
>gi|156095009|ref|XP_001613540.1| mRNA cleavage factor-like protein [Plasmodium vivax Sal-1]
gi|148802414|gb|EDL43813.1| mRNA cleavage factor-like protein, putative [Plasmodium vivax]
Length = 267
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YP ++Y F E + K ++ + + Y+ +G+R+ A++L +++PHLLLLQ
Sbjct: 59 VYPQANYEFNIDEKLKSKFVMDADKCKKRINTYNQNGIRSSALAIILCHRYEYPHLLLLQ 118
Query: 83 -VRNSIFKLPGGRLRPGESDIYGLKRKL-------------TRKLSLNEDGGEVDWEVGE 128
V + + L G+ R E LK+KL T + + E E+GE
Sbjct: 119 NVESQTYYLLSGKYRSWEKPRDVLKKKLQKYVNQIRDMHFATSHFNAEQKESEDPIEIGE 178
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
LG WWK F ++ PY P ++ RPKE +L+ V L F +P L A+PL
Sbjct: 179 FLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRCIFHLPPGFTLKALPL 233
>gi|158286004|ref|XP_001687987.1| AGAP007242-PB [Anopheles gambiae str. PEST]
gi|157020261|gb|EDO64636.1| AGAP007242-PB [Anopheles gambiae str. PEST]
Length = 141
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VLLV PH+L
Sbjct: 40 TINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 99
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLT 110
LLQ+ + FKLPGG L GE ++ GLKR LT
Sbjct: 100 LLQLGTTFFKLPGGELSAGEDEVDGLKRLLT 130
>gi|402576636|gb|EJW70594.1| pre-mRNA cleavage factor [Wuchereria bancrofti]
Length = 92
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 51 MKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLT 110
M+ Y+ G+R VE VLLV PH+LLLQ+ + FKLPGG L PGE ++ GLKR LT
Sbjct: 1 MREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLT 60
Query: 111 RKLSLNEDGGEVDWEVGECLGMWWKPDFE 139
L +DG + W + + +G WW+P+F+
Sbjct: 61 ETLG-RQDGAKDLWTIEDVIGNWWRPNFD 88
>gi|221052282|ref|XP_002257717.1| mrna cleavage factor-like protein [Plasmodium knowlesi strain H]
gi|193807548|emb|CAQ38053.1| mrna cleavage factor-like protein, putative [Plasmodium knowlesi
strain H]
Length = 257
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 14/175 (8%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YP ++Y F E + K +++ + + Y+ G+R A++L +++PHLLLLQ
Sbjct: 43 VYPQANYEFNIVEKLKSKFIMDTDKIKKRINAYNQDGIRNSALAIILCHRYEYPHLLLLQ 102
Query: 83 -VRNSIFKLPGGRLRPGESDIYGLKRKL-------------TRKLSLNEDGGEVDWEVGE 128
+ + + L G+ + E LK+KL T + E E E+GE
Sbjct: 103 NIESQTYHLLSGKYKSWEKPREVLKKKLQKYVNQIRDMHFGTSHFNTEEKETEDPIEIGE 162
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
LG WWK F ++ PY P ++ RPKE +L+ V L F +P L A+PL
Sbjct: 163 FLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRCIFHLPPGFTLKALPL 217
>gi|124505817|ref|XP_001351022.1| mRNA cleavage factor-like protein, putative [Plasmodium falciparum
3D7]
gi|23510665|emb|CAD49050.1| mRNA cleavage factor-like protein, putative [Plasmodium falciparum
3D7]
Length = 232
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVL 68
V I G + G + +YP S+Y F E + K + + + Y+ +G+R V A++
Sbjct: 15 VNITGRENKGEWL-LYPQSNYEFNIDEKLKNKFIIDKEKCKKRINAYNKNGIRNSVLAII 73
Query: 69 LVELFKHPHLLLLQ-VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED--------- 118
L +++PHLLLLQ + + + L G+ + E LK+KL + ++ +D
Sbjct: 74 LCHRYEYPHLLLLQHIESQKYYLLNGKYKTWEKPKEVLKKKLQKYINKIKDIHFTPAQIN 133
Query: 119 -GGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLK 177
E E+G+ LG WW+ F ++ PY P ++ RPKE +L+ V L F +P
Sbjct: 134 KEQEETVEIGDFLGEWWRTQFNSVFLPYLPAHISRPKEYIRLYQVILSPKCIFHLPPGFT 193
Query: 178 LLAVPL 183
L A+PL
Sbjct: 194 LKAIPL 199
>gi|154421279|ref|XP_001583653.1| hydrolase, NUDIX family protein [Trichomonas vaginalis G3]
gi|121917896|gb|EAY22667.1| hydrolase, NUDIX family protein [Trichomonas vaginalis G3]
Length = 191
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLL- 81
I+ LS+Y FG+ E +++ +R+ ++K + G V ++L H H +
Sbjct: 5 IHKLSNYRFGASEDEEEEEKAHTDRMEKIKEIFAVEGTVKSVRCIILA----HEHNITTI 60
Query: 82 ----QVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPD 137
++PGG +R GE D +KR LT+K + E GE D +G+ + W++P
Sbjct: 61 LLLKNKNKKKLQMPGGIVRTGEEDEAAIKRILTKKFRIVE--GEFD--IGDHVATWYRPQ 116
Query: 138 FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKVQ 193
F L+PY P ++ + KE K ++V LP F + +L A+ QIH N + Q
Sbjct: 117 FSEYLYPYLPAHITQAKEIEKWYIVMLPEKAHFNIQSKNELSALQFIQIHNNVEYQ 172
>gi|70948254|ref|XP_743664.1| mRNA cleavage factor-like protein [Plasmodium chabaudi chabaudi]
gi|56523269|emb|CAH76421.1| mRNA cleavage factor-like protein, putative [Plasmodium chabaudi
chabaudi]
Length = 241
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 23 IYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ 82
+YP SY F E + K + + ++Y+ +G+R V A+LL ++PHLLLLQ
Sbjct: 28 LYPQDSYEFNIDEKLKKKFIIDTEKYKKRINSYNKNGIRNTVIAILLCHRHEYPHLLLLQ 87
Query: 83 -VRNSIFKLPGGRLRPGESDIYGLKRKLTR-------------KLSLNEDGGEVD----- 123
+ + GG+ E LK+KL + KL++NE +
Sbjct: 88 NLATQEYFFLGGKYNSWEKPRDVLKKKLQKYINKIKDIHFAVNKLNINEQTADAKNKDEL 147
Query: 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
++VGE LG WW+ ++++ Y P ++ RPKEC +L+ V + F +P L A+PL
Sbjct: 148 FDVGEFLGEWWRTQYDSVYLSYLPAHITRPKECARLYQVTIMPKCIFHLPPGFTLKAIPL 207
>gi|440299573|gb|ELP92125.1| Cleavage and polyadenylation specificity factor subunit, putative
[Entamoeba invadens IP1]
Length = 262
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 102/175 (58%), Gaps = 11/175 (6%)
Query: 23 IYPLSSYYFGSK-EAIPFKDETLYNRVLRMKSNYDA-HGLRTCVEAVLLVELFKHPHLLL 80
IYP+++Y ++ + K ++ ++R+ ++ + H R CV V+LV P LL
Sbjct: 68 IYPITNYKIITQPDTSKIKLQSSHHRMDVLREFVEKNHVSRVCVYGVILVNNMGFPCLLT 127
Query: 81 LQ-----VRNSIFKLPGGRLRPGESD-IYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134
LQ + +L GG+L+ GE D + GLKRK+ KL+L E G + +++GE LG+++
Sbjct: 128 LQPSKGSTATAESQLIGGKLKVGEDDPVEGLKRKMRDKLNL-EYG--IHYDIGELLGVFY 184
Query: 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+ +++ L+PY PP+V PKE K++++ + S KF V ++ L ++PL + N
Sbjct: 185 RINYDKYLYPYIPPHVTLPKEIIKVYMIHMKESCKFGVLDSVSLNSLPLYDLLNN 239
>gi|67479111|ref|XP_654937.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56472032|gb|EAL49551.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 255
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSI-----FKLPGGRLRPGESD-IYGLKRKLTR 111
H RT V V+LV PHLL+LQ S+ L GGRL+ GE D + GLKRKL +
Sbjct: 98 HVPRTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRK 157
Query: 112 KLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171
K+S+ +E+GE LG +++ +++ L+PY P +V + KE ++++ L F
Sbjct: 158 KMSMEYI---THYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 214
Query: 172 VPKNLKLLAVPLCQIHEN 189
+ KL ++PL +H N
Sbjct: 215 IFDTDKLSSIPLFALHNN 232
>gi|226487326|emb|CAX75528.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
Length = 139
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+ +YPL SY FG+KE +D ++ R R++ +++ +G+R VE +LLV PH+L
Sbjct: 24 TITLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVL 83
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLT 110
LLQ+ + FKLPGG L PGE +I GLKR L+
Sbjct: 84 LLQL-GTFFKLPGGELHPGEEEIEGLKRLLS 113
>gi|449703267|gb|EMD43749.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica KU27]
Length = 217
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSI-----FKLPGGRLRPGESD-IYGLKRKLTR 111
H RT V V+LV PHLL+LQ S+ L GGRL+ GE D + GLKRKL +
Sbjct: 60 HVPRTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRK 119
Query: 112 KLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171
K+S+ +E+GE LG +++ +++ L+PY P +V + KE ++++ L F
Sbjct: 120 KMSMEYI---THYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 176
Query: 172 VPKNLKLLAVPLCQIHEN 189
+ KL ++PL +H N
Sbjct: 177 IFDTDKLSSIPLFALHNN 194
>gi|183232663|ref|XP_001913750.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica
HM-1:IMSS]
gi|32967089|gb|AAP92383.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica]
gi|169801938|gb|EDS89478.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 236
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSI-----FKLPGGRLRPGESD-IYGLKRKLTR 111
H RT V V+LV PHLL+LQ S+ L GGRL+ GE D + GLKRKL +
Sbjct: 79 HVPRTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRK 138
Query: 112 KLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171
K+S+ +E+GE LG +++ +++ L+PY P +V + KE ++++ L F
Sbjct: 139 KMSMEYI---THYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 195
Query: 172 VPKNLKLLAVPLCQIHEN 189
+ KL ++PL +H N
Sbjct: 196 IFDTDKLSSIPLFALHNN 213
>gi|407041326|gb|EKE40665.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
nuttalli P19]
Length = 247
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSI-----FKLPGGRLRPGESD-IYGLKRKLTR 111
H RT V V+LV PHLL+LQ S+ L GGRL+ GE D + GLKRKL +
Sbjct: 90 HVPRTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRK 149
Query: 112 KLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171
K+S+ +E+GE LG +++ +++ L+PY P +V + KE ++++ L F
Sbjct: 150 KMSMEYI---THYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 206
Query: 172 VPKNLKLLAVPLCQIHEN 189
+ KL ++PL +H N
Sbjct: 207 IFDTDKLSSIPLFALHNN 224
>gi|167386157|ref|XP_001737641.1| Cleavage and polyadenylation specificity factor subunit [Entamoeba
dispar SAW760]
gi|165899476|gb|EDR26062.1| Cleavage and polyadenylation specificity factor subunit, putative
[Entamoeba dispar SAW760]
Length = 240
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 58 HGLRTCVEAVLLVELFKHPHLLLLQVRNSI-----FKLPGGRLRPGESD-IYGLKRKLTR 111
H RT V V+LV PHLL+LQ S+ L GGRL+ GE D + GLKRKL +
Sbjct: 83 HVPRTSVYGVILVHKNNFPHLLVLQSNLSMNLKDEIHLVGGRLKIGEDDPVEGLKRKLRK 142
Query: 112 KLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171
K+S+ +E+GE LG +++ ++ L+PY P ++ + KE ++++ L F
Sbjct: 143 KMSMEYI---THYEIGELLGTFYRIGYDKNLYPYIPVHISQVKEIINIYMIHLVEKCDFK 199
Query: 172 VPKNLKLLAVPLCQIHEN 189
+ KL ++PL +H N
Sbjct: 200 IFDTDKLSSIPLFALHNN 217
>gi|157870973|ref|XP_001684036.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127104|emb|CAJ04590.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 271
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 52/210 (24%)
Query: 31 FGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS---- 86
G+ A PF+ + ++L +K + VE VLLV L +HPH+LL++ NS
Sbjct: 36 LGAGSAAPFRPPSAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINSRTRD 95
Query: 87 ----------------IFKLPGGRLRPGESDIYGLKRKLTRKLSLNE-----------DG 119
++LPGGR R GE++ L RKL R L LNE
Sbjct: 96 ADGMRTVPPSNTNAEVTYRLPGGRCRRGEAEESCLLRKLGRHL-LNEAKTPAGAAEVAST 154
Query: 120 GEVD-----------------WEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLF 160
G D + VGE L W++P F ++PY P ++ +E ++
Sbjct: 155 GNSDTVVDVGMTHTASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIY 214
Query: 161 LVKLPVSQKF-FVPKNLKLLAVPLCQIHEN 189
LV L + F V ++++L+A PL ++EN
Sbjct: 215 LVHLEPTVYFTMVQESVELVAAPLFDLYEN 244
>gi|146089416|ref|XP_001470377.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070410|emb|CAM68748.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 271
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 101/239 (42%), Gaps = 71/239 (29%)
Query: 21 VDIYPLSSYY-------------------FGSKEAIPFKDETLYNRVLRMKSNYDAHGLR 61
+D+YPL +Y G+ + PF+ + ++L +K +
Sbjct: 7 LDVYPLENYTQTSVDVSNGHAGVAGNKVNLGAGNSAPFRPPSAIEKLLSLKKRCEEEPCV 66
Query: 62 TCVEAVLLVELFKHPHLLLLQVRN--------------------SIFKLPGGRLRPGESD 101
VE VLLV L +HPH+LL++ N + ++LPGGR R GE++
Sbjct: 67 HSVEGVLLVHLHRHPHILLMKQINLRTHDADGMRTVPPSNTNAEATYRLPGGRCRRGEAE 126
Query: 102 IYGLKRKLTRKLSLNE-----------DGGEVD-----------------WEVGECLGMW 133
L RKL R L LNE G D + VGE L W
Sbjct: 127 ESCLLRKLGRHL-LNEAKAPAGAAEVASAGNSDTVVDVGMTHNASKAGSCFRVGEVLATW 185
Query: 134 WKPDFETLLFPYFPPNVKRP--KECTKLFLVKLPVSQKF-FVPKNLKLLAVPLCQIHEN 189
++P F ++PY P ++ +E ++LV L + F V + ++L+A PL ++EN
Sbjct: 186 YRPHFTPHMYPYVPAHIAAGSVREVRAIYLVHLEPTVYFSMVQEGVELVAAPLFDLYEN 244
>gi|398016859|ref|XP_003861617.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499844|emb|CBZ34917.1| hypothetical protein, conserved [Leishmania donovani]
Length = 271
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 101/239 (42%), Gaps = 71/239 (29%)
Query: 21 VDIYPLSSYY-------------------FGSKEAIPFKDETLYNRVLRMKSNYDAHGLR 61
+D+YPL +Y G+ + PF+ + ++L +K +
Sbjct: 7 LDVYPLENYTQTSVDVSNGHAGVAGNKVNLGAGNSAPFRPPSAIEKLLSLKKRCEEEPCV 66
Query: 62 TCVEAVLLVELFKHPHLLLLQVRN--------------------SIFKLPGGRLRPGESD 101
VE VLLV L +HPH+LL++ N + ++LPGGR R GE++
Sbjct: 67 HSVEGVLLVHLHRHPHILLMKQINLRTRDADGMRTVPPSNTNAEATYRLPGGRCRRGEAE 126
Query: 102 IYGLKRKLTRKLSLNE-----------DGGEVD-----------------WEVGECLGMW 133
L RKL R L LNE G D + VGE L W
Sbjct: 127 ESCLLRKLGRHL-LNEAKAPAGAAEVASAGNSDTVVDVGMTHNASKAGSCFRVGEVLATW 185
Query: 134 WKPDFETLLFPYFPPNVKRP--KECTKLFLVKLPVSQKF-FVPKNLKLLAVPLCQIHEN 189
++P F ++PY P ++ +E ++LV L + F V + ++L+A PL ++EN
Sbjct: 186 YRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFSMVQEGVELVAAPLFDLYEN 244
>gi|71408035|ref|XP_806446.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|50363269|gb|AAT75337.1| cleavage factor I 25 kDa [Trypanosoma cruzi]
gi|70870196|gb|EAN84595.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 292
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 49/206 (23%)
Query: 33 SKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS------ 86
+ +++ + +T +++ +K+ VE VLLV + HPH+LLL+ N+
Sbjct: 63 TSQSVERRLKTPLEKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHS 122
Query: 87 ------------IFKLPGGRLRPGESDIYGLKRKLTRKL--------------------- 113
+F LPGGR R GE + L RKL R L
Sbjct: 123 RVLPATNTNNLAVFSLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAESESSEMV 182
Query: 114 -------SLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLFLVKL 164
SL + VGE LG W++P F+ ++PY P +V KE +FLV L
Sbjct: 183 VEVGASHSLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHL 242
Query: 165 PVSQKFFVP-KNLKLLAVPLCQIHEN 189
P V ++++L+A PL ++EN
Sbjct: 243 PPQMLLTVAQRDVELVAAPLFDLYEN 268
>gi|71662854|ref|XP_818427.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883679|gb|EAN96576.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 292
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 49/207 (23%)
Query: 32 GSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS----- 86
+ +++ + +T +++ +K+ VE VLLV + HPH+LLL+ N+
Sbjct: 62 NASQSVERRLKTPLEKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAH 121
Query: 87 -------------IFKLPGGRLRPGESDIYGLKRKLTRKL------------SLNEDGGE 121
+F LPGGR R GE + L RKL R L + NE
Sbjct: 122 SRVLPATNTNNLAVFFLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAENESSET 181
Query: 122 V----------------DWEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLFLVK 163
V + VGE LG W++P F+ ++PY P +V KE +FLV
Sbjct: 182 VVEVGASHNLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVH 241
Query: 164 LPVSQKFFVP-KNLKLLAVPLCQIHEN 189
LP V ++++L+A PL ++EN
Sbjct: 242 LPPQMLLTVAQRDVELVAAPLFDLYEN 268
>gi|407853607|gb|EKG06513.1| hypothetical protein TCSYLVIO_002377 [Trypanosoma cruzi]
Length = 270
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 51/208 (24%)
Query: 32 GSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS----- 86
+ +++ + +T +++ +K+ VE VLLV + HPH+LLL+ N+
Sbjct: 40 NTSQSVERRLKTPLEKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAH 99
Query: 87 -------------IFKLPGGRLRPGESDIYGLKRKLTRKLSLNE------------DGGE 121
+F LPGGR R GE + L RKL R L LNE + E
Sbjct: 100 SRVLPATNTNNLAVFFLPGGRCRKGEPEEICLLRKLGRDL-LNEKKSLMASRTAESESSE 158
Query: 122 V-----------------DWEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLFLV 162
+ VGE LG W++P F+ ++PY P +V KE +FLV
Sbjct: 159 TVVEVGASHNLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLV 218
Query: 163 KLPVSQKFFVP-KNLKLLAVPLCQIHEN 189
LP V ++++L+A PL ++EN
Sbjct: 219 HLPPQMLLTVAQRDVELVAAPLFDLYEN 246
>gi|407420837|gb|EKF38695.1| hypothetical protein MOQ_001095 [Trypanosoma cruzi marinkellei]
Length = 292
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 51/207 (24%)
Query: 33 SKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNS------ 86
+ +++ + +T +++ +K+ VE VLLV + HPH+LLL+ N+
Sbjct: 63 TSQSVERRLKTPLEKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHS 122
Query: 87 ------------IFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG-------------- 120
+F LPGGR R GE + L RKL R L LNE
Sbjct: 123 RVLPATNTNNLAVFFLPGGRCRKGEPEEICLLRKLGRDL-LNEKKSLMASRTAESEPSET 181
Query: 121 ---------------EVDWEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLFLVK 163
+ VGE LG W++P F+ ++PY P +V KE +FLV
Sbjct: 182 VVEVGASHNLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVH 241
Query: 164 LPVSQKFFVP-KNLKLLAVPLCQIHEN 189
LP V ++++L+A PL ++EN
Sbjct: 242 LPPQMLLTVAQRDVELVAAPLFDLYEN 268
>gi|302680302|ref|XP_003029833.1| hypothetical protein SCHCODRAFT_82994 [Schizophyllum commune H4-8]
gi|300103523|gb|EFI94930.1| hypothetical protein SCHCODRAFT_82994 [Schizophyllum commune H4-8]
Length = 118
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 35/130 (26%)
Query: 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG 119
+R E VL+V HPH+L+LQ N+ FKLPG L+ GE ++ GLKR+L
Sbjct: 1 MRRTDEGVLVVHDHGHPHILMLQTANAFFKLPGDYLKSGEDEVDGLKRRLN--------- 51
Query: 120 GEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLL 179
ECL PPN + C KLFLV++ V KN+KLL
Sbjct: 52 --------ECLA---------------PPNASK---CKKLFLVQMTEKYVLAVAKNMKLL 85
Query: 180 AVPLCQIHEN 189
A+PL ++++N
Sbjct: 86 AIPLFELYDN 95
>gi|401423694|ref|XP_003876333.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492575|emb|CBZ27852.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 271
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 52/210 (24%)
Query: 31 FGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLL-----LQVRN 85
G + PF+ + ++L +K + VE VLLV L +HPH+LL L+ R+
Sbjct: 36 LGVGSSAPFRPPSAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTRD 95
Query: 86 S---------------IFKLPGGRLRPGESDIYGLKRKLTRKLSLNED---GGEVD---- 123
+ ++LPGGR R GE++ L RKL R L LNE G +
Sbjct: 96 ADGVRTVPPSNTNAEVTYRLPGGRCRRGEAEESCLLRKLGRHL-LNEAKTPAGAAEGTSA 154
Query: 124 ---------------------WEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLF 160
+ VGE L W++P F ++PY P ++ +E ++
Sbjct: 155 SNSDTVVDVGMTHSASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTVY 214
Query: 161 LVKLPVSQKF-FVPKNLKLLAVPLCQIHEN 189
LV L + F V + ++L+A PL ++EN
Sbjct: 215 LVHLEPTVYFNMVQEGVELVAAPLFDLYEN 244
>gi|389581861|dbj|GAB64582.1| mRNA cleavage factor-like protein, partial [Plasmodium cynomolgi
strain B]
Length = 159
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 14/125 (11%)
Query: 73 FKHPHLLLLQ-VRNSIFKLPGGRLRPGESDIYGLKRKLTRKLS-----------LNEDGG 120
+++PHLLLLQ + + + L G+ R E LKRKL + ++ LN +
Sbjct: 1 YEYPHLLLLQNIESQEYYLLSGKYRSWEKPREVLKRKLQKYVNQIRDMHFSTSHLNSEQK 60
Query: 121 EVD--WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKL 178
E++ E+GE LG WWK F ++ PY P ++ RPKE +L+ V L F +P L
Sbjct: 61 EIEDPIEIGEFLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRSIFHLPPGFTL 120
Query: 179 LAVPL 183
A+PL
Sbjct: 121 KALPL 125
>gi|340054509|emb|CCC48807.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 290
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 49/206 (23%)
Query: 33 SKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVR-------- 84
S AI + +T + +++ +K+ VE VLLV HPH+LLL+
Sbjct: 61 STAAIQRRIKTPFEKLMSLKARCREQQCVHSVEGVLLVHAHNHPHILLLRHNPKASSRSR 120
Query: 85 -------NS--IFKLPGGRLRPGESDIYGLKRKLTRKL-----------SLNEDGGE--V 122
NS +F+LPGGR R GE + L RKL R L + E+ E V
Sbjct: 121 VQPATNVNSTMVFRLPGGRCRSGELEESCLLRKLGRDLFNESKHAGRAQAAEEERSETVV 180
Query: 123 D----------------WEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLFLVKL 164
D + VGE L W++P F+ L++PY PP++ +E +FLV L
Sbjct: 181 DVAGSRGSAGTSTSASSFRVGEVLARWYRPHFDPLMYPYIPPHISENDVREVRTIFLVHL 240
Query: 165 PVSQ-KFFVPKNLKLLAVPLCQIHEN 189
P +L+AVPL +++N
Sbjct: 241 PPHMLLTTTETEEELVAVPLFDLYDN 266
>gi|84997093|ref|XP_953268.1| mRNA cleavage factor subunit [Theileria annulata strain Ankara]
gi|65304264|emb|CAI76643.1| mRNA cleavage factor subunit, putative [Theileria annulata]
Length = 226
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 22 DIYPLSSYYF-------GSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFK 74
DIYP + Y F G DE L RV Y G+R V V+L
Sbjct: 24 DIYPQTMYKFEHNSTKVGRGLIFRLSDEILERRV----KTYAVSGMRITVCGVILSHRKG 79
Query: 75 HPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTR-------KLSLNEDGGEVDWEV 126
P++LLL+ + L GG+ + E+ L KL R K LN + V
Sbjct: 80 FPYVLLLKRDLDKSVGLLGGKCKSFENPKEALSSKLARFITSTKHKHQLNIKDTMENIHV 139
Query: 127 GECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
GE L +W+ DF T PY P + RPKE L+ V LP + K VPK L VPL
Sbjct: 140 GELLADFWRCDFNTEPLPYLPLHTNRPKEKISLYQVILPENCKISVPKGYNLKFVPL 196
>gi|389601578|ref|XP_001562265.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505101|emb|CAM39294.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 271
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 52/177 (29%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN--------------------SIFKLPGGRLRPGESDIY 103
VE VLLV L +HPH+LL++ N +++LPGGR R GE++
Sbjct: 69 VEGVLLVHLHRHPHVLLMKQINVRSRDADGMRTVPPSNMNAEVMYRLPGGRCRRGEAEEG 128
Query: 104 GLKRKLTRKLSLNE-----------DGGEVD-----------------WEVGECLGMWWK 135
L RKL R L LNE + G D + +GE L W++
Sbjct: 129 CLLRKLGRHL-LNEAKTPAGASEVANTGHSDTVVDVGMAHNASKAGRFFRIGEVLSTWYR 187
Query: 136 PDFETLLFPYFPPNVKRP--KECTKLFLVKLPVSQKF-FVPKNLKLLAVPLCQIHEN 189
P F ++PY P ++ +E ++LV L + F V + ++L+A PL ++EN
Sbjct: 188 PHFTPHMYPYVPAHIAASSVREVRTVYLVHLEPTVYFNMVQEGVELVAAPLFDLYEN 244
>gi|403223795|dbj|BAM41925.1| mRNA cleavage factor subunit [Theileria orientalis strain Shintoku]
Length = 225
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 22 DIYPLSSYYF-------GSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFK 74
D+YP + Y F GS DE L RV +Y G+R V V+L +
Sbjct: 24 DVYPQTIYKFDYNTTKVGSGLIFRLSDEVLSKRV----RSYMVSGMRITVCGVILSHIKG 79
Query: 75 HPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTR---------KLSLNEDGGEVDW 124
P +LL+Q + L GG+ + E+ L KL R ++++ ED +
Sbjct: 80 FPSVLLVQREGDRSLGLLGGKCKSFENPKEALSAKLARFITSTKHRHQINIKEDVENI-- 137
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
+VG+ LG W+ DF T PY P + RPKE L+ V + + K VP+ L VPL
Sbjct: 138 QVGDLLGDLWRCDFNTEPLPYLPLHSNRPKEKISLYQVTVSENCKISVPRGFTLRFVPL 196
>gi|183232665|ref|XP_001913751.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica
HM-1:IMSS]
gi|169801939|gb|EDS89479.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 129
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 90 LPGGRLRPGESD-IYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPP 148
L GGRL+ GE D + GLKRKL +K+S+ +E+GE LG +++ +++ L+PY P
Sbjct: 9 LVGGRLKIGEDDPVEGLKRKLRKKMSMEYI---THYEIGELLGTFYRIEYDKNLYPYIPV 65
Query: 149 NVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+V + KE ++++ L F + KL ++PL +H N
Sbjct: 66 HVSQVKEIINIYMIHLVEKCDFKIFDTDKLSSIPLFALHNN 106
>gi|221504441|gb|EEE30114.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Toxoplasma
gondii VEG]
Length = 414
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 53 SNYDAHGLRTCVEAVLLVELFKHPHLLLL----QVRNSIFKLPGGRLRPGESDIYGLKRK 108
++Y GLR V V L ++ HLLLL R S+F + + E L+RK
Sbjct: 171 ASYQRQGLRRTVAPVFFCHLREYVHLLLLFHRETRRYSLFTF---KAKSWERPEVVLERK 227
Query: 109 LTRKLSLNEDGGEVD------W-----------EVGECLGMWWKPDFETLLFPYFPPNVK 151
L R + + EVD W EVGE LG WW+ +F+ P+ PP+V
Sbjct: 228 LARLFTKHRS--EVDRNVNYTWVADQKSEGVAAEVGEFLGEWWRVEFDEEPQPFLPPHVT 285
Query: 152 RPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQI--HENHKVQFS 195
RPKE +L+ V+LP F +P L A+PL + E H V S
Sbjct: 286 RPKERIRLYQVQLPPKCSFRLPPAFSLAALPLFDLLRPEIHGVALS 331
>gi|237841303|ref|XP_002369949.1| mRNA cleavage factor-like protein, putative [Toxoplasma gondii
ME49]
gi|211967613|gb|EEB02809.1| mRNA cleavage factor-like protein, putative [Toxoplasma gondii
ME49]
Length = 414
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 53 SNYDAHGLRTCVEAVLLVELFKHPHLLLL----QVRNSIFKLPGGRLRPGESDIYGLKRK 108
++Y GLR V V L ++ HLLLL R S+F + + E L+RK
Sbjct: 171 ASYQRQGLRRTVAPVFFCHLREYVHLLLLFHRETRRYSLFTF---KAKSWERPEVVLERK 227
Query: 109 LTRKLSLNEDGGEVD------W-----------EVGECLGMWWKPDFETLLFPYFPPNVK 151
L R + + EVD W EVGE LG WW+ +F+ P+ PP+V
Sbjct: 228 LARLFTKHRS--EVDRNVNYTWVADQKSEGVAAEVGEFLGEWWRVEFDEEPQPFLPPHVT 285
Query: 152 RPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQI--HENHKVQFS 195
RPKE +L+ V+LP F +P L A+PL + E H V S
Sbjct: 286 RPKERIRLYQVQLPPKCSFRLPPAFSLAALPLFDLLRPEIHGVALS 331
>gi|406602004|emb|CCH46383.1| Cleavage and polyadenylation specificity factor subunit
[Wickerhamomyces ciferrii]
Length = 347
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 88/218 (40%), Gaps = 53/218 (24%)
Query: 23 IYPLSSYYFGSKEAIPFKDETL---------------YNRVL--------------RMKS 53
IYPLS+Y K P KD L Y R +K
Sbjct: 82 IYPLSNYTLTQKSYQPLKDHELKEDEAEKEALKESKQYKRKTYKSDLIPNNLLYFKNLKK 141
Query: 54 NYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTR-- 111
D +G R ++ +++V K P +LLL+ N + +PGG L E + G +R L
Sbjct: 142 YNDFYGTRRFLQFLIVVGGEKEPAVLLLKEHNQLI-VPGGYLNHDEDEKTGAERILKELF 200
Query: 112 ---KLSLNEDGGEVD-----------------WEVGECLGMWWKPDFETLLFPYFPPNVK 151
+L+ G+ + +GE + WW+ D + ++PY P +V
Sbjct: 201 DEEELAAENGNGDANGTTNGATNGSAATVQEPLTIGETIARWWRTDLKPFVYPYLPRHVT 260
Query: 152 RPKECTKLFLVKLPVSQKFFVPKNLKLLA-VPLCQIHE 188
RPKE KL V LP ++K P K A PL +++
Sbjct: 261 RPKELIKLVYVDLPKTRKLSYPNFYKSFAPYPLVDLYD 298
>gi|324524942|gb|ADY48486.1| Cleavage and polyadenylation specificity factor subunit 5
[Ascaris suum]
Length = 93
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 17 NGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHP 76
N +V +YPL++Y FG KEA +D ++++R RM++ + G+R V+AV+LV P
Sbjct: 8 NRKIVKLYPLTNYVFGKKEAQHERDLSVHDRFDRMRNEFHKMGMRRSVDAVILVHEHSLP 67
Query: 77 HLLLLQVRNSIFKLP 91
H+LLL+V + FKLP
Sbjct: 68 HVLLLRVGQNFFKLP 82
>gi|72390984|ref|XP_845786.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175827|gb|AAX69954.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802322|gb|AAZ12227.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261329211|emb|CBH12190.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 300
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 50/176 (28%)
Query: 64 VEAVLLVELFKHPHLLLLQ-----------------VRNSIFKLPGGRLRPGESDIYGLK 106
VE VLLV HPH+LLL+ ++++LPGGR R GE + L
Sbjct: 101 VEGVLLVHAHDHPHVLLLRHNVKTTNRSRVLPATNTNSTAVYRLPGGRCRNGEPEELCLL 160
Query: 107 RKLTRKL-----------SLNEDGGEV-------------------DWEVGECLGMWWKP 136
RKL R L + E+ EV + VGE L W++P
Sbjct: 161 RKLGRDLLNESKRLTSSSTAEEERSEVVVDVGSAHPNGTAVTASSSSFRVGEVLARWYRP 220
Query: 137 DFETLLFPYFPPNVKRP--KECTKLFLVKLPVSQKFF-VPKNLKLLAVPLCQIHEN 189
F+ L++PY P +V +E +FLV +P + +L+A PL +++N
Sbjct: 221 HFDPLMYPYVPAHVAENDVREVRTIFLVHMPPRMLLTGTYGDEELVAAPLFDLYDN 276
>gi|342181834|emb|CCC91313.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 300
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 86/199 (43%), Gaps = 56/199 (28%)
Query: 42 ETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQ----------------VRN 85
E L + +R + H VE VLLV HPH+LLL+ + N
Sbjct: 83 EKLMSLKIRCREQQRVHS----VEGVLLVHAHDHPHVLLLRHSVKTASRSRVLPPTNINN 138
Query: 86 SI-FKLPGGRLRPGESDIYGLKRKLTRKLSLNED-------GGE-------VD------- 123
+ ++LPGGR R GE + L RKL R L LNE G E VD
Sbjct: 139 TAAYRLPGGRCRVGEQEELCLLRKLGRDL-LNESKCPPPSHGSEEKQSETVVDISGSHSA 197
Query: 124 ----------WEVGECLGMWWKPDFETLLFPYFPPNVKRP--KECTKLFLVKLPVSQKFF 171
+ VGE L W++P F+ L++PY P +V KE +FLV +P
Sbjct: 198 GASAAVSSSSFRVGEVLARWYRPHFDPLMYPYIPAHVAENDVKEIRTIFLVHMPPHMLLT 257
Query: 172 -VPKNLKLLAVPLCQIHEN 189
+ +L+A PL +++N
Sbjct: 258 RACGDEELVAAPLFDLYDN 276
>gi|156088887|ref|XP_001611850.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799104|gb|EDO08282.1| conserved hypothetical protein [Babesia bovis]
Length = 357
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 3 DEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEA-----IPFKD-ETLYNRVLRMKSNYD 56
D+ A +G+DR ++V YP SY F A + F+ E+L + +R Y+
Sbjct: 2 DDSTAGPTSDGNDRPDWLV--YPEDSYSFRDDSAPIGQGLLFRTPESLLCKRIRA---YN 56
Query: 57 AHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116
+GLR V ++L P +L+L+ + L GG+ + E+ LK KL R +S +
Sbjct: 57 QNGLRITVYGLILCHRNGFPCILVLRDTSGNIGLLGGKCKSFENPREVLKLKLARFVSTS 116
Query: 117 EDG-------GEVDWE-VGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQ 168
G VD VGE +G +W+ ++++ + PY P ++ RP+E ++ V L
Sbjct: 117 RKGVHQLNVRANVDTIIVGEFMGEFWRAEYDSDVLPYLPLHINRPREKILIYQVTLREQC 176
Query: 169 KFFVPKNLKLLAVPL 183
F P ++ + + L
Sbjct: 177 SFIAPGDMHIEPMAL 191
>gi|209877725|ref|XP_002140304.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555910|gb|EEA05955.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 231
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 59 GLRTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE 117
G+ V A++L + PH++LLQ S + LP R E+ L L +
Sbjct: 73 GIGRSVAALILTHRYLCPHVVLLQSDLTSEWMLPNCLYRAWENPRTVLVSFLKSLFFTDS 132
Query: 118 DGGEVDW-EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNL 176
+ E + EVGE LG WW+ +F PY PP+ RPKE +++ V LP F +PK
Sbjct: 133 NSTENNTAEVGEYLGSWWRTEFNYSPLPYLPPHSTRPKELIRIYQVLLPPKVLFKLPKYH 192
Query: 177 KLLAVPLCQIHEN 189
L ++PL + N
Sbjct: 193 VLKSLPLFDLDPN 205
>gi|221482388|gb|EEE20736.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Toxoplasma
gondii GT1]
Length = 419
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
Query: 53 SNYDAHGLRTCVEAVLLVELFKHPHLLLL----QVRNSIFKLPGGRLRPGESDIYGLKRK 108
++Y GLR V V L ++ HLLLL R S+F + + E L+RK
Sbjct: 171 ASYQRQGLRRTVAPVFFCHLREYVHLLLLFHRETRRYSLFTF---KAKSWERPEVVLERK 227
Query: 109 LTRKLSLNEDGGEVD------W-----------EVGECLGMWWKPDFETLLFPYFPPNVK 151
L R + + EVD W EVGE LG WW+ +F+ P+ PP+V
Sbjct: 228 LARLFTKHRS--EVDRNVNYTWVADQKSEGVAAEVGEFLGEWWRVEFDEEPQPFLPPHVT 285
Query: 152 RPKECTKLFL-----VKLPVSQKFFVPKNLKLLAVPLCQI--HENHKVQFS 195
RPKE +L L V+LP F +P L A+PL + E H V S
Sbjct: 286 RPKERIRLRLFLLSQVQLPPKCSFRLPPAFSLAALPLFDLLRPEIHGVALS 336
>gi|71029236|ref|XP_764261.1| mRNA cleavage factor protein [Theileria parva strain Muguga]
gi|68351215|gb|EAN31978.1| mRNA cleavage factor protein, putative [Theileria parva]
Length = 226
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 22 DIYPLSSYYF-------GSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFK 74
D+YP + + F G D+ L RV Y G+R V V+L
Sbjct: 24 DVYPQTMFKFEHNTTKVGRGLIFRLSDDILEKRV----KTYAVSGMRITVCGVILSHRKG 79
Query: 75 HPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDW-------EV 126
P +LLL+ + L GG+ + E+ L KL R ++ + +++ +V
Sbjct: 80 FPFVLLLKRDLDKSVGLLGGKCKSFENPKEVLSSKLARFITSTKHKHQLNIKETIETIQV 139
Query: 127 GECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPL 183
GE L +W+ DF T PY P + RPKE L+ V L S K VPK L VPL
Sbjct: 140 GELLADFWRCDFNTEPLPYLPLHTNRPKEKISLYQVVLQESCKISVPKGYSLKFVPL 196
>gi|57997521|emb|CAI46057.1| hypothetical protein [Homo sapiens]
Length = 105
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
+++YPL++Y FG+KE + KD ++ R RM+ +D G+R VE VL+V + PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 80 LLQVRNSIF 88
LL N I+
Sbjct: 96 LLSRFNFIY 104
>gi|401397366|ref|XP_003880035.1| hypothetical protein NCLIV_004770 [Neospora caninum Liverpool]
gi|325114444|emb|CBZ50000.1| hypothetical protein NCLIV_004770 [Neospora caninum Liverpool]
Length = 402
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 122 VDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAV 181
V EVGE LG WK +F+ P+ PP+V RPKE +L+ V LP + F +P L A+
Sbjct: 249 VAAEVGEFLGELWKSEFDEEPRPFLPPHVTRPKEKIRLYQVLLPPTCSFRLPPAFSLAAI 308
Query: 182 PLCQIH 187
PLC +
Sbjct: 309 PLCDLR 314
>gi|238601953|ref|XP_002395551.1| hypothetical protein MPER_04379 [Moniliophthora perniciosa FA553]
gi|215466474|gb|EEB96481.1| hypothetical protein MPER_04379 [Moniliophthora perniciosa FA553]
Length = 78
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 30 YFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFK 89
++ +KEA P +D ++ R+ R+++NY+ G+R VE +L+V HPH+L+LQ+ N+ FK
Sbjct: 18 FYSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQIANAFFK 77
Query: 90 L 90
L
Sbjct: 78 L 78
>gi|390369680|ref|XP_001199751.2| PREDICTED: cleavage and polyadenylation specificity factor
subunit 5-like, partial [Strongylocentrotus purpuratus]
Length = 119
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YPL++Y FG+KE + KD ++ R RMK + G R VE VL+V PH+LLLQ+
Sbjct: 1 YPLTNYTFGTKEPLYEKDSSVPARFQRMKDEFQKMGTRRSVEGVLIVHEHDLPHVLLLQL 60
Query: 84 RNSIFK 89
+ FK
Sbjct: 61 GTTFFK 66
>gi|62318512|dbj|BAD94845.1| hypothetical protein [Arabidopsis thaliana]
Length = 56
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 20 VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV 70
VV+ YPLS+Y FG+KE KD ++ +R+ RMK NY G+RT VE +LLV
Sbjct: 6 VVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLV 56
>gi|402593919|gb|EJW87846.1| pre-mRNA cleavage factor im, partial [Wuchereria bancrofti]
Length = 64
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 143 FPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
+PY P +V +PKE TKLFLV+LP F VPKN KL+A PL ++++N
Sbjct: 1 YPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDN 47
>gi|67609483|ref|XP_667008.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658093|gb|EAL36777.1| hypothetical protein Chro.60436 [Cryptosporidium hominis]
Length = 277
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
EVGE LG WW+ +F PY PP+ RPKE +++ V LP F +PK+ L ++PL
Sbjct: 187 EVGEYLGTWWRTEFNYSPLPYLPPHSTRPKETIRIYQVILPPKLLFKLPKHHVLKSLPLF 246
Query: 185 QIHEN 189
+ N
Sbjct: 247 DLDPN 251
>gi|66475808|ref|XP_627720.1| NUDIX domain protein; mRNA cleavage factor-like protein Im like,
plant+animal group [Cryptosporidium parvum Iowa II]
gi|32398958|emb|CAD98423.1| hypothetical predicted protein, unknown function [Cryptosporidium
parvum]
gi|46229142|gb|EAK89991.1| NUDIX domain protein; mRNA cleavage factor-like protein Im like,
plant+animal group [Cryptosporidium parvum Iowa II]
Length = 277
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 125 EVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLC 184
EVGE LG WW+ +F PY PP+ RPKE +++ V LP F +PK+ L ++PL
Sbjct: 187 EVGEYLGTWWRTEFNYSPLPYLPPHSTRPKETIRIYQVILPPKLLFKLPKHHVLKSLPLF 246
Query: 185 QIHEN 189
+ N
Sbjct: 247 DLDPN 251
>gi|429329523|gb|AFZ81282.1| mRNA cleavage factor-like protein, putative [Babesia equi]
Length = 186
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 2 SDEMGASVPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMK-SNYDAHGL 60
++E GA + ++ + Y +Y + + + FK L N +++ + +Y G+
Sbjct: 7 NEEGGALLTLDSIEWPIYPDYVYKFETNSTNTGRGLIFK---LTNELVKKRLRSYSRSGM 63
Query: 61 RTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDG 119
RT V +++ PH+LLL+ + + L GG+ + E+ L KL R ++ N
Sbjct: 64 RTTVCGLIMCHSQGVPHVLLLKREEDGCYGLLGGKCKIYENPREKLSHKLARFITCNTRH 123
Query: 120 GEV--------DWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171
+ + +V E L WW+ D+ T P+ P + RPKE ++ V P+ + F
Sbjct: 124 ANLYDIKSSIENIKVKEFLADWWRCDYHTDPLPFLPLHTSRPKEKISIYQVCTPLIYQIF 183
>gi|399218569|emb|CCF75456.1| unnamed protein product [Babesia microti strain RI]
Length = 313
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 11/181 (6%)
Query: 23 IYPLSSYYFGSKEAIPFKD---ETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79
IY ++Y+ S + K +TL + + + Y+ G+R + A++L HLL
Sbjct: 5 IYERNTYHSESDVRLANKTITIDTLGDFLSKRIDRYNRDGMRHSLFALILCHKHNFCHLL 64
Query: 80 LLQVRNSIFKLPGGRLRPGESDIYGLKRKLTR--------KLSLNEDGGEVDWEVGECLG 131
++ L GG+ SD L+ KL + K SL+ + E+G+ +
Sbjct: 65 AVKNAKGELCLLGGKKTLYNSDKECLRSKLQKYIRPPKSLKNSLDIAAFDSHVEIGQVVA 124
Query: 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHK 191
WWK + PY PP+ E +F V + F +P L+AV L + E
Sbjct: 125 QWWKTKVDGRYLPYIPPHASTCVETATIFQVTVQPGCIFQLPPGHTLVAVSLIDLMEEES 184
Query: 192 V 192
+
Sbjct: 185 I 185
>gi|161899559|ref|XP_001713005.1| pre-mRNA cleavage factor I [Bigelowiella natans]
gi|75756500|gb|ABA27393.1| pre-mRNA cleavage factor I [Bigelowiella natans]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 21/180 (11%)
Query: 24 YPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQV 83
YP+ +Y F + +A+ KD + +++ R+K + G +++++V KHP++LL +
Sbjct: 5 YPIENYKFYTSKAVKRKDRKMRHKLQRLKYKFLKFGSFASRKSIVIVTKHKHPYVLLFRS 64
Query: 84 RNSIFKLPG-GRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEV------GECLGMWWKP 136
N F + +L +SD +K++L E+ V + + ++ +
Sbjct: 65 FNDKFDIIDIDKLLKFKSD-------HLKKVNL-ENVNNVSKNLFTKSMNSRLVSIFLRQ 116
Query: 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFV------PKNLKLLAVPLCQIHENH 190
FE+ L+PY P++K K+ ++L L ++ F V PKN ++ A P +I+ N+
Sbjct: 117 GFESKLYPYCLPHIKYTKQIFFVYLNFLKKNELFQVLLSSKIPKNFEVKAFPFFEIYLNN 176
>gi|330040399|ref|XP_003239893.1| hypothetical protein CPARA_3gp337 [Cryptomonas paramecium]
gi|327206819|gb|AEA38995.1| hypothetical protein CPARA_3gp337 [Cryptomonas paramecium]
Length = 198
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 13/144 (9%)
Query: 13 GSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAH----GLRTCVEAVL 68
G +N + IY +SSY F +K A K ++VL++ +NY+ + + V+
Sbjct: 2 GKKKNFSLTRIYQISSYTFLNKNAKDVKWSK--SKVLKIYTNYEVLREFLAPKRYISFVI 59
Query: 69 LVELFKHPHLLLLQVR-NSIFKLPGGRLR-PGESDIYGLKRKLTRKLSLNEDGGEVDWEV 126
L+ + PH+LL++ + +F +PG RL +S I +L +KL+L + +
Sbjct: 60 LINIGDFPHILLIRSKYEKVFYIPGSRLSISNKSKIKYSFLELQKKLNLKKPNIAKN--- 116
Query: 127 GECLGMWWKPDFETLL-FPYFPPN 149
+G W P+ E+ + +P+FPP+
Sbjct: 117 -TYIGSWIFPEKESRVKYPFFPPH 139
>gi|110669351|ref|YP_659162.1| Mut/nudix family protein [Haloquadratum walsbyi DSM 16790]
gi|109627098|emb|CAJ53578.1| NUDIX family hydrolase [Haloquadratum walsbyi DSM 16790]
Length = 163
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 72 LFKHPHLLLLQVRNSI---FKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGE 128
+ PH L+ V+ S ++LPGGRL P E I GLKR+L + E G V E
Sbjct: 15 VLTDPHGQLIVVQRSSDRQWELPGGRLAPDEPPIRGLKREL-----IEETGISVAVETIL 69
Query: 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIH 187
C W + Y+ + + P+ + + L + + ++ P ++ + LC+ H
Sbjct: 70 CADSWINDRTQDRFAVYYTCSCETPE--SDVILSEEHIDCQWMSPSAVETV---LCEKH 123
>gi|223043428|ref|ZP_03613474.1| MutT domain containing protein [Staphylococcus capitis SK14]
gi|417905878|ref|ZP_12549675.1| hydrolase, NUDIX family [Staphylococcus capitis VCU116]
gi|222443217|gb|EEE49316.1| MutT domain containing protein [Staphylococcus capitis SK14]
gi|341598548|gb|EGS41052.1| hydrolase, NUDIX family [Staphylococcus capitis VCU116]
Length = 131
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE K +LL+QVRN + PGG++ GES + L+R+L +L L D E
Sbjct: 2 IKCVCLVEE-KENQILLVQVRNRDKYYFPGGKIDEGESYVEALQRELKEELCL--DLAET 58
Query: 123 DWE-VGECLG 131
D E +G +G
Sbjct: 59 DLEFIGTVVG 68
>gi|349806027|gb|AEQ18486.1| putative cleavage and polyadenylation specific factor 5 protein
[Hymenochirus curtipes]
Length = 72
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 153 PKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHEN 189
PKE KLFLV+L F VPKN KL+A PL ++++N
Sbjct: 14 PKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 50
>gi|314935100|ref|ZP_07842459.1| MutT/NUDIX family protein [Staphylococcus caprae C87]
gi|313653030|gb|EFS16793.1| MutT/NUDIX family protein [Staphylococcus caprae C87]
Length = 135
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE K +LL+QVRN + PGG++ GES + L+R+L +L L D E
Sbjct: 6 IKCVCLVEE-KENQILLVQVRNRDKYYFPGGKIDEGESYVEALQRELKEELRL--DLAET 62
Query: 123 DWE-VGECLG 131
D E +G +G
Sbjct: 63 DLEFIGTVVG 72
>gi|170047798|ref|XP_001851396.1| vacuolar protein sorting 13D [Culex quinquefasciatus]
gi|167870083|gb|EDS33466.1| vacuolar protein sorting 13D [Culex quinquefasciatus]
Length = 4198
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 11 INGSDRNGYVVDIYPLSSYYFGSKE-AIPFKDETLYN-RVLRMKSNYDAHGLRT--CVEA 66
++ ++R G+ P + ++ KE AIP +T+++ + R S D+ G + CV
Sbjct: 1478 LDTTNRKGFRFSALPRAEEFYSCKENAIPIIHDTIFSLEISRDTSEVDSDGFKIFGCVVK 1537
Query: 67 VLLVELFKHPHLLLLQVRNSIFKLPGGRLRP 97
L V L + + LL+ +++FK+P +RP
Sbjct: 1538 PLRVSLKRQQYEQLLETVDNLFKIPKDLVRP 1568
>gi|227496826|ref|ZP_03927095.1| hydrolase [Actinomyces urogenitalis DSM 15434]
gi|226833671|gb|EEH66054.1| hydrolase [Actinomyces urogenitalis DSM 15434]
Length = 175
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN------SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE 117
V A +V+ HP +L R+ ++LPGG++ PGE+ L R+L ++SL+
Sbjct: 15 VAAAAIVDSLAHPTAMLCAARSYPAEHAGQYELPGGKVEPGETPTQALARELREEISLSV 74
Query: 118 D-GGEV 122
G EV
Sbjct: 75 HLGAEV 80
>gi|357050439|ref|ZP_09111637.1| hypothetical protein HMPREF9478_01620 [Enterococcus saccharolyticus
30_1]
gi|355381092|gb|EHG28219.1| hypothetical protein HMPREF9478_01620 [Enterococcus saccharolyticus
30_1]
Length = 153
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 74 KHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133
+H ++L+Q N F LPGG + PGES +KR+L ++ G++ +GE + +
Sbjct: 30 EHQQVILVQAPNGAFFLPGGEIEPGESKEETIKRELVEEVGF---AGKIASYLGEAVDYF 86
Query: 134 WKPDFET 140
+ ET
Sbjct: 87 YSRHRET 93
>gi|257870181|ref|ZP_05649834.1| NUDIX family hydrolase [Enterococcus gallinarum EG2]
gi|257804345|gb|EEV33167.1| NUDIX family hydrolase [Enterococcus gallinarum EG2]
Length = 147
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 74 KHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133
+H ++L+Q N F LPGG + PGES +KR+L ++ G++ +GE + +
Sbjct: 24 EHQQVILVQAPNGAFFLPGGEIEPGESKEETIKRELVEEVGF---AGKIASYLGEAVDYF 80
Query: 134 WKPDFET 140
+ ET
Sbjct: 81 YSRHRET 87
>gi|242372710|ref|ZP_04818284.1| MutT domain protein [Staphylococcus epidermidis M23864:W1]
gi|242349627|gb|EES41228.1| MutT domain protein [Staphylococcus epidermidis M23864:W1]
Length = 129
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE K +LL+QVRN + PGG++ GES + L+R+L +L L+ E+
Sbjct: 2 IKCVCLVEE-KDDKILLVQVRNREKYYFPGGKIDDGESYVEALQRELKEELCLDLAEEEL 60
Query: 123 DWEVGECLGMWW-KPDFETLL 142
++ +G +G + +PD T L
Sbjct: 61 EF-IGTVVGEAYPQPDTRTEL 80
>gi|118616759|ref|YP_905091.1| mutator protein MutT2 [Mycobacterium ulcerans Agy99]
gi|118568869|gb|ABL03620.1| mutator protein MutT2 [Mycobacterium ulcerans Agy99]
Length = 140
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 59 GLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNED 118
G C VL+ + + P L ++LPGG++ GE++ L R+L +L L D
Sbjct: 12 GAFICGATVLVAQRVRPPEL------AGRWELPGGKVAGGETEPAALARELVEELGLGVD 65
Query: 119 GGEVDWEVGECLGMWWKPDFETLLFPY 145
D VGE LG PD +T+L Y
Sbjct: 66 ----DVAVGERLGADVVPDEKTVLRAY 88
>gi|386728222|ref|YP_006194605.1| phosphohydrolase [Staphylococcus aureus subsp. aureus 71193]
gi|418979798|ref|ZP_13527589.1| Phosphohydrolase (MutT/nudix family protein) [Staphylococcus aureus
subsp. aureus DR10]
gi|379992382|gb|EIA13836.1| Phosphohydrolase (MutT/nudix family protein) [Staphylococcus aureus
subsp. aureus DR10]
gi|384229515|gb|AFH68762.1| Phosphohydrolase (MutT/nudix family protein) [Staphylococcus aureus
subsp. aureus 71193]
Length = 136
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 59 GLRTCVEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE 117
G+ ++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +++L
Sbjct: 2 GVSKMIKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEEINLTL 60
Query: 118 DGGEVDWEVGECLG 131
E+++ +G +G
Sbjct: 61 TMDEIEY-IGTIVG 73
>gi|151220643|ref|YP_001331465.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508713|ref|YP_001574372.1| hypothetical protein USA300HOU_0467 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|258452473|ref|ZP_05700481.1| MutT domain-containing protein [Staphylococcus aureus A5948]
gi|282924517|ref|ZP_06332187.1| MutT/NUDIX family protein [Staphylococcus aureus A9765]
gi|294850647|ref|ZP_06791370.1| MutT/NUDIX family protein [Staphylococcus aureus A9754]
gi|150373443|dbj|BAF66703.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367522|gb|ABX28493.1| hypothetical protein USA300HOU_0467 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257859873|gb|EEV82713.1| MutT domain-containing protein [Staphylococcus aureus A5948]
gi|282592826|gb|EFB97831.1| MutT/NUDIX family protein [Staphylococcus aureus A9765]
gi|294822484|gb|EFG38930.1| MutT/NUDIX family protein [Staphylococcus aureus A9754]
Length = 134
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 5 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 63
Query: 123 DWEVGECLG 131
++ VG +G
Sbjct: 64 EY-VGTIVG 71
>gi|57651348|ref|YP_185397.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus COL]
gi|87162255|ref|YP_493153.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194221|ref|YP_499013.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|221140298|ref|ZP_03564791.1| hypothetical protein SauraJ_01536 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|262049723|ref|ZP_06022589.1| hypothetical protein SAD30_1332 [Staphylococcus aureus D30]
gi|262051984|ref|ZP_06024196.1| hypothetical protein SA930_0987 [Staphylococcus aureus 930918-3]
gi|284023476|ref|ZP_06377874.1| hypothetical protein Saura13_02684 [Staphylococcus aureus subsp.
aureus 132]
gi|304380481|ref|ZP_07363159.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379013748|ref|YP_005289984.1| hypothetical protein SAVC_01920 [Staphylococcus aureus subsp.
aureus VC40]
gi|384861129|ref|YP_005743849.1| NADH pyrophosphatase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384869050|ref|YP_005751764.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
T0131]
gi|387142155|ref|YP_005730548.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
TW20]
gi|415688822|ref|ZP_11452370.1| hypothetical protein CGSSa01_06832 [Staphylococcus aureus subsp.
aureus CGS01]
gi|417648577|ref|ZP_12298398.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21189]
gi|418280750|ref|ZP_12893576.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21178]
gi|418284787|ref|ZP_12897493.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21209]
gi|418317385|ref|ZP_12928805.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21232]
gi|418569616|ref|ZP_13133937.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21283]
gi|418578392|ref|ZP_13142488.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|418640549|ref|ZP_13202772.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-24]
gi|418647240|ref|ZP_13209311.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-88]
gi|418651861|ref|ZP_13213848.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-91]
gi|418658479|ref|ZP_13220202.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-111]
gi|418873376|ref|ZP_13427673.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-125]
gi|418902723|ref|ZP_13456766.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|418905129|ref|ZP_13459157.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|418911132|ref|ZP_13465117.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG547]
gi|418926261|ref|ZP_13480159.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG2018]
gi|418927779|ref|ZP_13481667.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|418947537|ref|ZP_13499899.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-157]
gi|418953336|ref|ZP_13505336.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-189]
gi|419774171|ref|ZP_14300145.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CO-23]
gi|422744622|ref|ZP_16798579.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422747294|ref|ZP_16801211.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424784313|ref|ZP_18211127.1| hypothetical protein CN79_0443 [Staphylococcus aureus CN79]
gi|440706766|ref|ZP_20887489.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21282]
gi|440736461|ref|ZP_20916062.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus DSM
20231]
gi|57285534|gb|AAW37628.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus COL]
gi|87128229|gb|ABD22743.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201779|gb|ABD29589.1| MutT/nudix family protein, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|259160113|gb|EEW45145.1| hypothetical protein SA930_0987 [Staphylococcus aureus 930918-3]
gi|259162185|gb|EEW46761.1| hypothetical protein SAD30_1332 [Staphylococcus aureus D30]
gi|269940038|emb|CBI48414.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
TW20]
gi|302750358|gb|ADL64535.1| NADH pyrophosphatase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304340999|gb|EFM06921.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315196712|gb|EFU27058.1| hypothetical protein CGSSa01_06832 [Staphylococcus aureus subsp.
aureus CGS01]
gi|320139244|gb|EFW31123.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142058|gb|EFW33883.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329313185|gb|AEB87598.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
T0131]
gi|329730504|gb|EGG66893.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21189]
gi|365167594|gb|EHM58976.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21178]
gi|365172544|gb|EHM63227.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21209]
gi|365245466|gb|EHM86104.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21232]
gi|371985522|gb|EHP02588.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21283]
gi|374362445|gb|AEZ36550.1| hypothetical protein SAVC_01920 [Staphylococcus aureus subsp.
aureus VC40]
gi|375020797|gb|EHS14309.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-24]
gi|375024121|gb|EHS17559.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-91]
gi|375030572|gb|EHS23883.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-88]
gi|375038451|gb|EHS31432.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-111]
gi|375366212|gb|EHS70222.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-125]
gi|375375295|gb|EHS78883.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-189]
gi|375375458|gb|EHS79038.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-157]
gi|377698290|gb|EHT22640.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|377726999|gb|EHT51109.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG547]
gi|377739812|gb|EHT63816.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|377741681|gb|EHT65668.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG2018]
gi|377743736|gb|EHT67715.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|377765887|gb|EHT89734.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|383972044|gb|EID88102.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CO-23]
gi|421957397|gb|EKU09718.1| hypothetical protein CN79_0443 [Staphylococcus aureus CN79]
gi|436430228|gb|ELP27592.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506734|gb|ELP42501.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21282]
Length = 131
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ VG +G
Sbjct: 61 EY-VGTIVG 68
>gi|417897239|ref|ZP_12541177.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21235]
gi|341839881|gb|EGS81434.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21235]
Length = 131
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|282915782|ref|ZP_06323552.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
D139]
gi|283768182|ref|ZP_06341097.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus H19]
gi|282320411|gb|EFB50751.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
D139]
gi|283462061|gb|EFC09145.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus H19]
Length = 134
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 5 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 63
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 64 EY-IGTIVG 71
>gi|418598089|ref|ZP_13161602.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21343]
gi|374400152|gb|EHQ71274.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21343]
Length = 131
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|418283783|ref|ZP_12896522.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21202]
gi|365166312|gb|EHM57979.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21202]
Length = 131
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|82750174|ref|YP_415915.1| hypothetical protein SAB0416 [Staphylococcus aureus RF122]
gi|257795412|ref|ZP_05644391.1| MutT domain-containing protein [Staphylococcus aureus A9781]
gi|258413438|ref|ZP_05681713.1| MutT domain-containing protein [Staphylococcus aureus A9763]
gi|258421440|ref|ZP_05684367.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258424501|ref|ZP_05687378.1| MutT domain-containing protein [Staphylococcus aureus A9635]
gi|258436861|ref|ZP_05689201.1| MutT domain-containing protein [Staphylococcus aureus A9299]
gi|258444420|ref|ZP_05692754.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445632|ref|ZP_05693812.1| MutT domain-containing protein [Staphylococcus aureus A6300]
gi|258448164|ref|ZP_05696293.1| MutT/nudix family protein [Staphylococcus aureus A6224]
gi|258455998|ref|ZP_05703953.1| MutT domain-containing protein [Staphylococcus aureus A5937]
gi|282893606|ref|ZP_06301839.1| MutT/NUDIX family protein [Staphylococcus aureus A8117]
gi|282927500|ref|ZP_06335118.1| MutT/NUDIX family protein [Staphylococcus aureus A10102]
gi|295405715|ref|ZP_06815525.1| MutT/NUDIX family protein [Staphylococcus aureus A8819]
gi|297245624|ref|ZP_06929492.1| MutT/NUDIX family protein [Staphylococcus aureus A8796]
gi|82655705|emb|CAI80104.1| hypothetical protein SAB0416 [Staphylococcus aureus RF122]
gi|257789384|gb|EEV27724.1| MutT domain-containing protein [Staphylococcus aureus A9781]
gi|257839685|gb|EEV64154.1| MutT domain-containing protein [Staphylococcus aureus A9763]
gi|257842864|gb|EEV67286.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257845096|gb|EEV69133.1| MutT domain-containing protein [Staphylococcus aureus A9635]
gi|257848652|gb|EEV72639.1| MutT domain-containing protein [Staphylococcus aureus A9299]
gi|257850679|gb|EEV74627.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855582|gb|EEV78517.1| MutT domain-containing protein [Staphylococcus aureus A6300]
gi|257858679|gb|EEV81553.1| MutT/nudix family protein [Staphylococcus aureus A6224]
gi|257862210|gb|EEV84983.1| MutT domain-containing protein [Staphylococcus aureus A5937]
gi|282590824|gb|EFB95900.1| MutT/NUDIX family protein [Staphylococcus aureus A10102]
gi|282764292|gb|EFC04419.1| MutT/NUDIX family protein [Staphylococcus aureus A8117]
gi|294969790|gb|EFG45809.1| MutT/NUDIX family protein [Staphylococcus aureus A8819]
gi|297177610|gb|EFH36861.1| MutT/NUDIX family protein [Staphylococcus aureus A8796]
Length = 134
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 5 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 63
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 64 EY-IGTIVG 71
>gi|417904263|ref|ZP_12548092.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21269]
gi|341847809|gb|EGS88982.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21269]
Length = 131
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|15923457|ref|NP_370991.1| hypothetical protein SAV0467 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926144|ref|NP_373677.1| hypothetical protein SA0425 [Staphylococcus aureus subsp. aureus
N315]
gi|148266925|ref|YP_001245868.1| NUDIX hydrolase [Staphylococcus aureus subsp. aureus JH9]
gi|150392971|ref|YP_001315646.1| NUDIX hydrolase [Staphylococcus aureus subsp. aureus JH1]
gi|156978795|ref|YP_001441054.1| hypothetical protein SAHV_0464 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253315737|ref|ZP_04838950.1| hypothetical protein SauraC_06256 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005260|ref|ZP_05143861.2| hypothetical protein SauraM_02295 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|384546745|ref|YP_005735998.1| hypothetical protein SAOV_0484 [Staphylococcus aureus subsp. aureus
ED133]
gi|384549331|ref|YP_005738583.1| NADH pyrophosphatase [Staphylococcus aureus subsp. aureus JKD6159]
gi|384863794|ref|YP_005749153.1| NUDIX domain-containing protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387149627|ref|YP_005741191.1| hypothetical protein SA2981_0442 [Staphylococcus aureus 04-02981]
gi|387779604|ref|YP_005754402.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|415692546|ref|ZP_11454507.1| hypothetical protein CGSSa03_04487 [Staphylococcus aureus subsp.
aureus CGS03]
gi|416847580|ref|ZP_11907229.1| MutT/nudix family protein [Staphylococcus aureus O46]
gi|417651801|ref|ZP_12301557.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21172]
gi|417802124|ref|ZP_12449195.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21318]
gi|417890755|ref|ZP_12534827.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21200]
gi|417893356|ref|ZP_12537389.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21201]
gi|418308814|ref|ZP_12920410.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21194]
gi|418423635|ref|ZP_12996785.1| hypothetical protein MQA_01542 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426577|ref|ZP_12999607.1| hypothetical protein MQC_01899 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418429505|ref|ZP_13002440.1| hypothetical protein MQE_01977 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432400|ref|ZP_13005203.1| hypothetical protein MQG_01941 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436114|ref|ZP_13007934.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439011|ref|ZP_13010736.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS6]
gi|418441991|ref|ZP_13013612.1| hypothetical protein MQM_01128 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445118|ref|ZP_13016613.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS8]
gi|418448060|ref|ZP_13019469.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS9]
gi|418450886|ref|ZP_13022231.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS10]
gi|418453902|ref|ZP_13025178.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418456808|ref|ZP_13028025.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418558765|ref|ZP_13123314.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21252]
gi|418562068|ref|ZP_13126536.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21262]
gi|418567778|ref|ZP_13132142.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21272]
gi|418639004|ref|ZP_13201274.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-3]
gi|418652312|ref|ZP_13214279.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-99]
gi|418661932|ref|ZP_13223495.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-122]
gi|418877350|ref|ZP_13431590.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880168|ref|ZP_13434390.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883096|ref|ZP_13437298.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885757|ref|ZP_13439909.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|418888363|ref|ZP_13442502.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|418893923|ref|ZP_13448026.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|418913693|ref|ZP_13467667.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418919279|ref|ZP_13473227.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|418931584|ref|ZP_13485424.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|418990355|ref|ZP_13538018.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|418993174|ref|ZP_13540815.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG290]
gi|419784053|ref|ZP_14309828.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-M]
gi|424774859|ref|ZP_18201861.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus CM05]
gi|443637294|ref|ZP_21121377.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21236]
gi|448744453|ref|ZP_21726343.1| MutT domain-containing protein [Staphylococcus aureus KT/Y21]
gi|13700357|dbj|BAB41655.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246235|dbj|BAB56629.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|147739994|gb|ABQ48292.1| NUDIX hydrolase [Staphylococcus aureus subsp. aureus JH9]
gi|149945423|gb|ABR51359.1| NUDIX hydrolase [Staphylococcus aureus subsp. aureus JH1]
gi|156720930|dbj|BAF77347.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|285816166|gb|ADC36653.1| hypothetical protein SA2981_0442 [Staphylococcus aureus 04-02981]
gi|298693796|gb|ADI97018.1| hypothetical protein SAOV_0484 [Staphylococcus aureus subsp. aureus
ED133]
gi|302332180|gb|ADL22373.1| NADH pyrophosphatase [Staphylococcus aureus subsp. aureus JKD6159]
gi|312828961|emb|CBX33803.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130095|gb|EFT86084.1| hypothetical protein CGSSa03_04487 [Staphylococcus aureus subsp.
aureus CGS03]
gi|323442171|gb|EGA99803.1| MutT/nudix family protein [Staphylococcus aureus O46]
gi|329725631|gb|EGG62110.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21172]
gi|334275418|gb|EGL93708.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21318]
gi|341854528|gb|EGS95398.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21200]
gi|341855206|gb|EGS96057.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21201]
gi|344176706|emb|CCC87168.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|365237097|gb|EHM77962.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21194]
gi|371974716|gb|EHO92034.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21262]
gi|371976942|gb|EHO94226.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21252]
gi|371982423|gb|EHO99583.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21272]
gi|375019630|gb|EHS13182.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-3]
gi|375021667|gb|EHS15162.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-99]
gi|375037559|gb|EHS30583.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-122]
gi|377698045|gb|EHT22398.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|377700440|gb|EHT24779.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|377714174|gb|EHT38377.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|377717322|gb|EHT41499.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|377724355|gb|EHT48472.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|377727655|gb|EHT51759.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|377733926|gb|EHT57967.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|377748159|gb|EHT72122.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG290]
gi|377756976|gb|EHT80873.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|377759736|gb|EHT83617.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377768331|gb|EHT92116.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|383364257|gb|EID41571.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus IS-M]
gi|387721295|gb|EIK09169.1| hypothetical protein MQE_01977 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387721347|gb|EIK09217.1| hypothetical protein MQC_01899 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387722777|gb|EIK10561.1| hypothetical protein MQA_01542 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387727859|gb|EIK15362.1| hypothetical protein MQG_01941 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387729693|gb|EIK17115.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS5]
gi|387731803|gb|EIK19061.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS6]
gi|387738687|gb|EIK25715.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS8]
gi|387739969|gb|EIK26950.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS9]
gi|387740333|gb|EIK27293.1| hypothetical protein MQM_01128 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387747634|gb|EIK34341.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS10]
gi|387748486|gb|EIK35162.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387749282|gb|EIK35917.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402347096|gb|EJU82161.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus CM05]
gi|443406021|gb|ELS64609.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21236]
gi|445562248|gb|ELY18428.1| MutT domain-containing protein [Staphylococcus aureus KT/Y21]
Length = 131
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|453382954|dbj|GAC82616.1| putative hydrolase [Gordonia paraffinivorans NBRC 108238]
Length = 142
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 66 AVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGE 121
AV V +H +LL+Q RN + +PGG++ PGES ++R++ + L+ + GE
Sbjct: 7 AVGAVITDEHGRILLVQRRNPPAAGKWSIPGGKVEPGESLEAAVEREILEETGLHVEVGE 66
Query: 122 VDWEV 126
+ W V
Sbjct: 67 LLWSV 71
>gi|335029053|ref|ZP_08522565.1| hydrolase, NUDIX family [Streptococcus infantis SK1076]
gi|334269454|gb|EGL87871.1| hydrolase, NUDIX family [Streptococcus infantis SK1076]
Length = 169
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
H ++L+Q N + LPGG + GE+ + LKR+L +L + G
Sbjct: 50 HEKIILVQAPNGAWFLPGGEIEAGENHLEALKRELIEELGFTAEIG 95
>gi|269202086|ref|YP_003281355.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus
ED98]
gi|296276737|ref|ZP_06859244.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus MR1]
gi|262074376|gb|ACY10349.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus
ED98]
Length = 131
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYCFPGGKIEEGESQVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|417936501|ref|ZP_12579812.1| hydrolase, NUDIX family [Streptococcus infantis X]
gi|343400650|gb|EGV13163.1| hydrolase, NUDIX family [Streptococcus infantis X]
Length = 149
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
H ++L+Q N + LPGG + GE+ + LKR+L +L + G
Sbjct: 30 HEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEELGFTAEIG 75
>gi|421277678|ref|ZP_15728495.1| mutT/NUDIX family protein [Streptococcus mitis SPAR10]
gi|395874168|gb|EJG85255.1| mutT/NUDIX family protein [Streptococcus mitis SPAR10]
Length = 149
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
H ++L+Q N + LPGG + GE+ + LKR+L +L + G
Sbjct: 30 HEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEELGFTAEIG 75
>gi|417937928|ref|ZP_12581228.1| hydrolase, NUDIX family [Streptococcus infantis SK970]
gi|343392192|gb|EGV04765.1| hydrolase, NUDIX family [Streptococcus infantis SK970]
Length = 181
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
H ++L+Q N + LPGG + GE+ + LKR+L +L + G
Sbjct: 62 HEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEELGFTAEIG 107
>gi|322388199|ref|ZP_08061803.1| MutT/NUDIX family protein [Streptococcus infantis ATCC 700779]
gi|419842925|ref|ZP_14366255.1| NUDIX domain protein [Streptococcus infantis ATCC 700779]
gi|321140871|gb|EFX36372.1| MutT/NUDIX family protein [Streptococcus infantis ATCC 700779]
gi|385703353|gb|EIG40473.1| NUDIX domain protein [Streptococcus infantis ATCC 700779]
Length = 149
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
H ++L+Q N + LPGG + GE+ + LKR+L +L + G
Sbjct: 30 HEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEELGFTAEIG 75
>gi|416841612|ref|ZP_11904502.1| MutT/nudix family protein [Staphylococcus aureus O11]
gi|323439233|gb|EGA96959.1| MutT/nudix family protein [Staphylococcus aureus O11]
Length = 131
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 78 LLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131
+LL+QVRN + PGG++ GES ++ L R++ +L+L E+++ +G +G
Sbjct: 15 ILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTMDEIEY-IGTIVG 68
>gi|322392262|ref|ZP_08065723.1| MutT/NUDIX family protein [Streptococcus peroris ATCC 700780]
gi|321144797|gb|EFX40197.1| MutT/NUDIX family protein [Streptococcus peroris ATCC 700780]
Length = 149
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 75 HPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGG 120
H ++L+Q N + LPGG + GE+ + LKR+L +L + G
Sbjct: 30 HEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEELGFTAEIG 75
>gi|387601821|ref|YP_005733342.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus
ST398]
gi|404477847|ref|YP_006709277.1| MutT/NUDIX family protein, putative [Staphylococcus aureus
08BA02176]
gi|418311713|ref|ZP_12923235.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21331]
gi|283469759|emb|CAQ48970.1| MutT/nudix family protein [Staphylococcus aureus subsp. aureus
ST398]
gi|365233824|gb|EHM74767.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21331]
gi|404439336|gb|AFR72529.1| MutT/NUDIX family protein, putative [Staphylococcus aureus
08BA02176]
Length = 131
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +++L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEEINLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|350559432|ref|ZP_08928272.1| NUDIX hydrolase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781700|gb|EGZ35983.1| NUDIX hydrolase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 142
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 85 NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGE 121
+++LPGG++ PGES L+R+L +L LN GE
Sbjct: 40 EGLWELPGGKVEPGESLARALQRELAEELGLNAGVGE 76
>gi|257424577|ref|ZP_05601006.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427243|ref|ZP_05603645.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429879|ref|ZP_05606266.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432582|ref|ZP_05608945.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435487|ref|ZP_05611538.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
M876]
gi|282903050|ref|ZP_06310943.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
C160]
gi|282907439|ref|ZP_06315287.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907787|ref|ZP_06315627.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912672|ref|ZP_06320468.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913292|ref|ZP_06321084.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
M899]
gi|282918246|ref|ZP_06325987.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
C427]
gi|282922920|ref|ZP_06330610.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
C101]
gi|283959895|ref|ZP_06377336.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293498339|ref|ZP_06666193.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
58-424]
gi|293509280|ref|ZP_06667997.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
M809]
gi|293550547|ref|ZP_06673219.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
M1015]
gi|257273595|gb|EEV05697.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276874|gb|EEV08325.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257280360|gb|EEV10947.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283461|gb|EEV13593.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257286083|gb|EEV16199.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
M876]
gi|282315141|gb|EFB45527.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
C101]
gi|282317943|gb|EFB48311.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
C427]
gi|282323392|gb|EFB53711.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
M899]
gi|282324368|gb|EFB54684.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328351|gb|EFB58624.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330338|gb|EFB59859.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282597509|gb|EFC02468.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
C160]
gi|283789487|gb|EFC28314.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919594|gb|EFD96670.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291097270|gb|EFE27528.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
58-424]
gi|291467919|gb|EFF10428.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
M809]
Length = 134
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 5 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESPVHALLREVKEELNLTLTMDEI 63
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 64 EY-IGTIVG 71
>gi|317122818|ref|YP_004102821.1| NUDIX hydrolase [Thermaerobacter marianensis DSM 12885]
gi|315592798|gb|ADU52094.1| NUDIX hydrolase [Thermaerobacter marianensis DSM 12885]
Length = 169
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 54 NYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFK-LPGGRLRPGESDIYGLKRKLTRK 112
++D G+R + ++ H+LL Q+ + + LPGGR+ PGE L+R+L +
Sbjct: 3 SFDTDGVRFNLRVAGVI--LAGDHVLLTQIAGADYWFLPGGRVEPGEPTDAALRRELWEE 60
Query: 113 LSLNEDGGEVDWEV 126
L ++ G + W V
Sbjct: 61 LDVHAHVGRLLWVV 74
>gi|418601222|ref|ZP_13164661.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21345]
gi|374399188|gb|EHQ70331.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21345]
Length = 131
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESPVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|297588791|ref|ZP_06947432.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus MN8]
gi|384865942|ref|YP_005746138.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|415685069|ref|ZP_11450060.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|417888592|ref|ZP_12532696.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21195]
gi|418566077|ref|ZP_13130464.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21264]
gi|418596277|ref|ZP_13159843.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21342]
gi|297577302|gb|EFH96015.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus MN8]
gi|312436447|gb|ADQ75518.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193204|gb|EFU23603.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|341854537|gb|EGS95406.1| hydrolase, NUDIX family [Staphylococcus aureus subsp. aureus 21195]
gi|371971517|gb|EHO88915.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21264]
gi|374398337|gb|EHQ69519.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus 21342]
Length = 131
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESPVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
>gi|49482691|ref|YP_039915.1| MutT domain-containing protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295426998|ref|ZP_06819637.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|49240820|emb|CAG39487.1| MutT domain containing protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295129450|gb|EFG59077.1| MutT/NUDIX family protein [Staphylococcus aureus subsp. aureus
EMRSA16]
Length = 134
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 5 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESPVHALLREVKEELNLTLTMDEI 63
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 64 EY-IGTIVG 71
>gi|418581135|ref|ZP_13145220.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|418891030|ref|ZP_13445149.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896846|ref|ZP_13450921.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418899850|ref|ZP_13453910.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|418909697|ref|ZP_13463689.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG149]
gi|418916310|ref|ZP_13470274.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922093|ref|ZP_13476012.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|418981367|ref|ZP_13529083.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|418984962|ref|ZP_13532654.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|377705381|gb|EHT29687.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|377708638|gb|EHT32927.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708689|gb|EHT32977.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|377712930|gb|EHT37146.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|377733104|gb|EHT57150.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|377736366|gb|EHT60388.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|377750951|gb|EHT74886.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG149]
gi|377752539|gb|EHT76462.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|377763068|gb|EHT86929.1| NUDIX domain protein [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 131
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 64 VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEV 122
++ V LVE +LL+QVRN + PGG++ GES ++ L R++ +L+L E+
Sbjct: 2 IKCVCLVE-ETADKILLVQVRNREKYYFPGGKIEEGESPVHALLREVKEELNLTLTMDEI 60
Query: 123 DWEVGECLG 131
++ +G +G
Sbjct: 61 EY-IGTIVG 68
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.142 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,323,415,859
Number of Sequences: 23463169
Number of extensions: 138602513
Number of successful extensions: 238156
Number of sequences better than 100.0: 418
Number of HSP's better than 100.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 237427
Number of HSP's gapped (non-prelim): 437
length of query: 196
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 61
effective length of database: 9,191,667,552
effective search space: 560691720672
effective search space used: 560691720672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)