Query 029260
Match_columns 196
No_of_seqs 161 out of 196
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 16:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029260.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029260hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bho_A Cleavage and polyadenyl 100.0 7.6E-83 2.6E-87 540.4 18.8 186 9-195 6-191 (208)
2 3i7u_A AP4A hydrolase; nudix p 99.4 1E-12 3.5E-17 100.7 8.8 63 60-132 1-64 (134)
3 3eds_A MUTT/nudix family prote 99.3 1.7E-11 5.9E-16 94.5 10.3 107 46-166 5-111 (153)
4 2pbt_A AP4A hydrolase; nudix p 99.2 3E-11 1E-15 89.5 8.9 50 77-133 16-65 (134)
5 1vcd_A NDX1; nudix protein, di 99.2 9.6E-11 3.3E-15 86.1 10.7 64 60-133 1-64 (126)
6 3f6a_A Hydrolase, nudix family 99.2 1.2E-10 4.1E-15 89.8 10.2 62 61-132 5-67 (159)
7 3f13_A Putative nudix hydrolas 99.2 1E-10 3.6E-15 92.7 10.1 61 63-133 17-77 (163)
8 3oga_A Nucleoside triphosphata 99.2 7.7E-11 2.6E-15 91.2 8.3 60 55-116 20-85 (165)
9 2fvv_A Diphosphoinositol polyp 99.2 6.4E-11 2.2E-15 96.5 8.0 73 54-134 33-107 (194)
10 3id9_A MUTT/nudix family prote 99.2 1.5E-10 5.3E-15 90.0 9.7 74 52-136 14-89 (171)
11 3u53_A BIS(5'-nucleosyl)-tetra 99.2 6.5E-11 2.2E-15 91.4 7.2 53 64-116 5-66 (155)
12 1ktg_A Diadenosine tetraphosph 99.1 7.8E-11 2.7E-15 87.9 7.1 56 61-116 3-60 (138)
13 3gwy_A Putative CTP pyrophosph 99.1 1.1E-10 3.9E-15 88.0 8.0 82 63-167 7-95 (140)
14 3gg6_A Nudix motif 18, nucleos 99.1 3.1E-10 1E-14 86.9 10.3 66 59-134 18-87 (156)
15 3son_A Hypothetical nudix hydr 99.1 8.3E-11 2.8E-15 89.4 7.0 58 59-116 1-61 (149)
16 3shd_A Phosphatase NUDJ; nudix 99.1 4.4E-10 1.5E-14 85.5 10.3 102 63-186 6-112 (153)
17 2azw_A MUTT/nudix family prote 99.1 1.2E-10 4.2E-15 87.6 6.9 89 61-166 18-107 (148)
18 1sjy_A MUTT/nudix family prote 99.1 1.1E-09 3.7E-14 83.5 12.2 87 60-167 11-105 (159)
19 3i9x_A MUTT/nudix family prote 99.1 1.2E-10 4.3E-15 92.8 7.0 68 62-136 28-110 (187)
20 2yyh_A MUTT domain, 8-OXO-DGTP 99.1 5.4E-10 1.8E-14 84.0 9.3 67 60-134 8-78 (139)
21 3grn_A MUTT related protein; s 99.1 3.6E-10 1.2E-14 86.5 7.8 53 61-116 8-66 (153)
22 1nqz_A COA pyrophosphatase (MU 99.1 2.1E-10 7.2E-15 91.5 6.4 59 57-116 30-94 (194)
23 3q1p_A Phosphohydrolase (MUTT/ 99.1 7.7E-10 2.6E-14 90.2 9.7 64 62-136 69-133 (205)
24 1k2e_A Nudix homolog; nudix/MU 99.0 3.5E-10 1.2E-14 87.4 7.0 59 63-132 3-62 (156)
25 2fb1_A Conserved hypothetical 99.0 4.4E-10 1.5E-14 93.7 8.1 69 60-135 12-84 (226)
26 2b0v_A Nudix hydrolase; struct 99.0 6.2E-10 2.1E-14 84.3 8.2 51 76-133 19-73 (153)
27 3cng_A Nudix hydrolase; struct 99.0 5.4E-10 1.9E-14 89.5 8.3 60 64-133 42-105 (189)
28 4dyw_A MUTT/nudix family prote 99.0 7.9E-10 2.7E-14 85.6 9.0 63 61-134 29-95 (157)
29 2fkb_A Putative nudix hydrolas 99.0 1.4E-09 4.7E-14 85.3 10.4 57 58-116 33-96 (180)
30 1mut_A MUTT, nucleoside tripho 99.0 1.6E-10 5.3E-15 84.9 4.4 52 62-116 5-61 (129)
31 2w4e_A MUTT/nudix family prote 99.0 2.7E-10 9.2E-15 87.2 5.8 52 62-115 5-61 (145)
32 2pqv_A MUTT/nudix family prote 99.0 7.8E-10 2.7E-14 84.4 8.0 61 60-132 18-78 (154)
33 3gz5_A MUTT/nudix family prote 99.0 6.7E-10 2.3E-14 93.5 8.3 72 61-139 22-99 (240)
34 2rrk_A ORF135, CTP pyrophospho 99.0 1.1E-09 3.8E-14 81.5 8.1 50 77-133 21-75 (140)
35 3ees_A Probable pyrophosphohyd 99.0 1.4E-09 4.9E-14 81.9 8.8 61 62-132 22-87 (153)
36 3h95_A Nucleoside diphosphate- 99.0 7.9E-10 2.7E-14 89.2 7.8 63 61-132 26-91 (199)
37 3q93_A 7,8-dihydro-8-oxoguanin 99.0 7.4E-10 2.5E-14 88.0 7.5 53 61-116 24-80 (176)
38 3o8s_A Nudix hydrolase, ADP-ri 99.0 9.3E-10 3.2E-14 89.8 8.1 64 61-135 70-133 (206)
39 3r03_A Nudix hydrolase; struct 99.0 5.5E-10 1.9E-14 83.8 6.2 51 64-116 10-65 (144)
40 2o1c_A DATP pyrophosphohydrola 99.0 7.4E-10 2.5E-14 83.0 6.7 53 62-116 10-64 (150)
41 2yvp_A NDX2, MUTT/nudix family 99.0 8.3E-10 2.9E-14 87.0 7.1 52 63-116 42-98 (182)
42 3fcm_A Hydrolase, nudix family 99.0 1.3E-09 4.5E-14 87.6 8.3 55 61-116 44-99 (197)
43 3hhj_A Mutator MUTT protein; n 99.0 8.2E-10 2.8E-14 84.9 6.6 41 76-116 41-86 (158)
44 3fk9_A Mutator MUTT protein; s 99.0 1.1E-09 3.7E-14 88.2 7.6 53 60-116 3-56 (188)
45 1f3y_A Diadenosine 5',5'''-P1, 99.0 1E-09 3.4E-14 83.7 6.4 55 59-116 12-68 (165)
46 1vhz_A ADP compounds hydrolase 98.9 3.6E-09 1.2E-13 86.0 10.0 106 61-189 48-160 (198)
47 2fml_A MUTT/nudix family prote 98.9 7.4E-09 2.5E-13 88.6 11.7 56 60-115 38-99 (273)
48 1rya_A GDP-mannose mannosyl hy 98.9 1.5E-09 5.2E-14 82.7 6.5 54 60-116 17-74 (160)
49 2kdv_A RNA pyrophosphohydrolas 98.9 1.8E-09 6.1E-14 84.9 6.8 55 59-116 6-61 (164)
50 1hzt_A Isopentenyl diphosphate 98.9 1.7E-09 5.9E-14 86.1 6.4 58 57-116 27-91 (190)
51 1q27_A Putative nudix hydrolas 98.9 4.2E-09 1.4E-13 81.8 8.1 53 62-116 34-93 (171)
52 3exq_A Nudix family hydrolase; 98.9 3.6E-09 1.2E-13 82.2 7.1 64 62-133 10-77 (161)
53 2b06_A MUTT/nudix family prote 98.9 4.1E-09 1.4E-13 80.3 6.8 64 61-132 8-75 (155)
54 2jvb_A Protein PSU1, mRNA-deca 98.9 2.5E-09 8.7E-14 80.7 5.5 52 64-116 6-58 (146)
55 1mk1_A ADPR pyrophosphatase; n 98.8 5.5E-09 1.9E-13 85.1 7.2 63 62-133 43-111 (207)
56 1x51_A A/G-specific adenine DN 98.8 4.4E-09 1.5E-13 80.7 4.9 55 61-115 19-80 (155)
57 1v8y_A ADP-ribose pyrophosphat 98.8 6.9E-09 2.4E-13 81.1 6.0 80 63-166 35-119 (170)
58 1g0s_A Hypothetical 23.7 kDa p 98.8 3.2E-08 1.1E-12 81.1 10.0 54 62-116 57-120 (209)
59 2a6t_A SPAC19A8.12; alpha/beta 98.8 8.3E-09 2.9E-13 88.7 6.6 57 60-117 99-157 (271)
60 2dsc_A ADP-sugar pyrophosphata 98.7 2.8E-08 9.5E-13 81.2 8.3 54 63-116 63-122 (212)
61 3fjy_A Probable MUTT1 protein; 98.7 3.1E-08 1E-12 87.2 8.2 53 73-132 35-88 (364)
62 2qjo_A Bifunctional NMN adenyl 98.7 2.7E-08 9.1E-13 85.2 7.4 52 61-116 203-258 (341)
63 3o6z_A GDP-mannose pyrophospha 98.7 8.1E-08 2.8E-12 77.3 9.6 53 62-116 45-108 (191)
64 1u20_A U8 snoRNA-binding prote 98.7 4.9E-08 1.7E-12 80.3 8.4 64 53-116 25-97 (212)
65 3e57_A Uncharacterized protein 98.7 9.1E-09 3.1E-13 86.6 4.0 64 60-133 66-144 (211)
66 1vk6_A NADH pyrophosphatase; 1 98.7 2.5E-08 8.5E-13 86.0 6.8 62 63-133 140-204 (269)
67 2qjt_B Nicotinamide-nucleotide 98.7 3.4E-08 1.2E-12 85.2 7.5 41 76-116 219-263 (352)
68 1q33_A Pyrophosphatase, ADP-ri 98.6 7.2E-08 2.5E-12 83.7 7.1 42 75-116 138-180 (292)
69 3fsp_A A/G-specific adenine gl 98.5 4.5E-08 1.5E-12 87.2 4.0 49 76-132 252-305 (369)
70 3kvh_A Protein syndesmos; NUDT 98.5 4.2E-08 1.4E-12 83.1 3.0 113 58-190 18-150 (214)
71 2xsq_A U8 snoRNA-decapping enz 98.5 1.2E-07 4.2E-12 78.9 4.8 96 77-189 66-173 (217)
72 3qsj_A Nudix hydrolase; struct 98.4 1.7E-07 5.8E-12 79.5 4.0 57 60-116 7-90 (232)
73 3q91_A Uridine diphosphate glu 98.3 5.1E-07 1.8E-11 75.4 5.7 32 85-116 94-126 (218)
74 2dho_A Isopentenyl-diphosphate 98.2 5.5E-06 1.9E-10 69.7 9.8 58 57-116 54-127 (235)
75 2pny_A Isopentenyl-diphosphate 98.2 2.9E-06 1E-10 72.0 6.5 59 57-117 65-139 (246)
76 3rh7_A Hypothetical oxidoreduc 97.8 2.6E-05 8.7E-10 69.0 6.1 63 60-137 182-245 (321)
77 3dup_A MUTT/nudix family prote 97.7 5.4E-05 1.9E-09 66.6 7.1 59 58-116 114-180 (300)
78 2qlc_A DNA repair protein RADC 27.8 13 0.00046 28.3 0.2 49 60-128 64-114 (126)
79 4fp5_D LT-IIB, heat-labIle ent 22.6 2.2E+02 0.0077 20.6 6.3 48 50-98 5-57 (98)
80 1qb5_D Protein (heat labIle en 21.6 2.2E+02 0.0077 20.6 5.7 48 50-98 5-57 (99)
81 3fk8_A Disulphide isomerase; A 20.1 61 0.0021 22.6 2.5 27 73-99 90-117 (133)
No 1
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=100.00 E-value=7.6e-83 Score=540.36 Aligned_cols=186 Identities=41% Similarity=0.782 Sum_probs=175.3
Q ss_pred cCcCCCCCCCceEEEeeCCceeeccccCCCCCChhHHHHHHHHHhhhccCCCeeEEEEEEEEecCCCCeEEEEEecCCee
Q 029260 9 VPINGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIF 88 (196)
Q Consensus 9 ~~~~~~~~~~~~~~lYPl~nY~Fg~k~~~~ekd~sv~~rl~rl~~~y~~~GmRrsV~aVilvh~~~~phVLLlq~~~~~~ 88 (196)
..++++++..++|+||||+||+||+||+++|||+++.+||+||+++|++.|||++|+|||+||+|++|||||+|+++++|
T Consensus 6 ~~~~~~~~~~~~~~iYplsnY~f~~k~~~~ekd~s~~~r~~rl~~~y~~~g~R~sV~avil~~~~~~phVLLlq~~~~~f 85 (208)
T 3bho_A 6 IQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFF 85 (208)
T ss_dssp CCCCCCTTTCCEEEECBGGGEEEEEECCCCCSCSSHHHHHHHHHHHHHHHCSEEEEEEEEEEEETTEEEEEEEEEETTEE
T ss_pred ccCCCCccccceEEEecccceeEccCCccccccccHHHHHHHHHHHHHhhCCceEEEEEEEEcCCCCcEEEEEEcCCCcE
Confidence 34567778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeeccCCCcCCCCCCCCCCCCceeeeEEEEEEcCCce
Q 029260 89 KLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQ 168 (196)
Q Consensus 89 ~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwRp~Fet~~yPYlP~Hit~pKE~~klylV~Lpe~~ 168 (196)
+||||++++||++++||+|||.||||+ ++++..+|+||+|||+|||||||++|||||||||||||||+|||+|||||+|
T Consensus 86 ~LPGGkle~gE~~~eaL~REL~EELg~-~~~~~~~~eIge~lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~ 164 (208)
T 3bho_A 86 KLPGGELNPGEDEVEGLKRLMTEILGR-QDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKA 164 (208)
T ss_dssp ECSEEECCTTCCHHHHHHHHHHHHHCC-CC-----CEEEEEEEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSE
T ss_pred ECCCcccCCCCCHHHHHHHHHHHHhCC-CcCCCccEEEhheEEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccc
Confidence 999999999999999999999999998 4566789999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCCeEEecccceeecCcccccc
Q 029260 169 KFFVPKNLKLLAVPLCQIHENHKVQFS 195 (196)
Q Consensus 169 ~f~vPkn~kL~AvPLfelydN~~~y~~ 195 (196)
+|+|||||||+||||||||||+++||.
T Consensus 165 ~f~vPkn~kL~AvPLfely~N~~~yG~ 191 (208)
T 3bho_A 165 LFAVPKNYKLVAAPLFELYDNAPGYGP 191 (208)
T ss_dssp EEEEETTCEEEEEEHHHHTTCHHHHHH
T ss_pred eEecCCCCeEEeecHHhhhcchhhhch
Confidence 999999999999999999999999984
No 2
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.39 E-value=1e-12 Score=100.71 Aligned_cols=63 Identities=19% Similarity=0.357 Sum_probs=51.3
Q ss_pred CeeEEEE-EEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 60 LRTCVEA-VLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 60 mRrsV~a-Vilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
||+-+.| +|+.++ -+|||+|+.+|.|.||||++++||++.+|++||+.||+|+ +.++.++++.
T Consensus 1 M~~~~aag~vv~~~---~~vLL~~r~~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl-------~~~~~~~l~~ 64 (134)
T 3i7u_A 1 MKKEFSAGGVLFKD---GEVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV-------KGEILDYIGE 64 (134)
T ss_dssp CEEEEEEEEEEEET---TEEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEE
T ss_pred CccEEEEEEEEEEC---CEEEEEEeCCCcEECCeeEecCCCCHHHHHHHHHHHhcCc-------eEEEeeeeee
Confidence 5453333 333344 3899999999999999999999999999999999999999 5677777776
No 3
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.29 E-value=1.7e-11 Score=94.45 Aligned_cols=107 Identities=13% Similarity=0.143 Sum_probs=71.5
Q ss_pred HHHHHHHhhhccCCCeeEEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceE
Q 029260 46 NRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWE 125 (196)
Q Consensus 46 ~rl~rl~~~y~~~GmRrsV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~ 125 (196)
+.+..++.........+.+.++++++.. .+|||.|+..+.|.||||++++||+..+|++|||.||+|+ ...
T Consensus 5 ~~~~~~r~~~~~~~~~~~~v~~ii~~~~--~~vLL~~r~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~ 75 (153)
T 3eds_A 5 LYYKKIREQLGHELIFXPSVAAVIKNEQ--GEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGL-------KVQ 75 (153)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEEEBCTT--CCEEEECC---CBBCSEEECCTTSCHHHHHHHHHHHHHCE-------EEE
T ss_pred hHHHHHHHhcCCCcEEeeeEEEEEEcCC--CeEEEEEcCCCcEECCccccCCCCCHHHHHHHHHHHHHCc-------cce
Confidence 3445566666666776666666665433 4799988888899999999999999999999999999999 566
Q ss_pred EeeeeeeeeccCCCcCCCCCCCCCCCCceeeeEEEEEEcCC
Q 029260 126 VGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPV 166 (196)
Q Consensus 126 Vge~lg~WwRp~Fet~~yPYlP~Hit~pKE~~klylV~Lpe 166 (196)
+.+.++.+-.+.+. |..++-........+|++.+..
T Consensus 76 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~f~~~~~~ 111 (153)
T 3eds_A 76 VKKQKGVFGGKEYR-----YTYSNGDEVEYIVVVFECEVTS 111 (153)
T ss_dssp EEEEEEEECSGGGE-----EECTTSCEEEEEEEEEEEEEEE
T ss_pred eeeEEEEeccccee-----eecCCCCeEEEEEEEEEEEecC
Confidence 67777765333221 1112222233456777777654
No 4
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.24 E-value=3e-11 Score=89.48 Aligned_cols=50 Identities=20% Similarity=0.414 Sum_probs=44.5
Q ss_pred eEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 77 hVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
+|||+|+..+.|.||||.+++||+..+|+.||+.||+|+ +....+.++..
T Consensus 16 ~vLl~~r~~~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~~ 65 (134)
T 2pbt_A 16 EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV-------KGEILDYIGEI 65 (134)
T ss_dssp EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEE
T ss_pred EEEEEEeCCCcEECCccccCCCCCHHHHHHHHHHHHHCC-------ccEEeeeeeEE
Confidence 999999988999999999999999999999999999998 45555666653
No 5
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.22 E-value=9.6e-11 Score=86.11 Aligned_cols=64 Identities=23% Similarity=0.183 Sum_probs=52.4
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
|..+|.+|++.+ . .+|||.|+..|.|.||||++++||+..+++.||+.||+|+ ...+.+.++..
T Consensus 1 m~~~~~~vi~~~-~--~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~~ 64 (126)
T 1vcd_A 1 MELGAGGVVFNA-K--REVLLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEETGV-------RAEVLLPLYPT 64 (126)
T ss_dssp CEEEEEEEEECT-T--SCEEEEECTTSCEECCEECCCTTCCHHHHHHHHHHHHHCC-------EEEEEEEEEEE
T ss_pred CeeEEEEEEEcC-C--CEEEEEEECCCCccCCcCcCCCCCCHHHHHHHHHHHhhCc-------EeeeccEEeEE
Confidence 456677666532 2 2899999988999999999999999999999999999999 45666677764
No 6
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.19 E-value=1.2e-10 Score=89.82 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=50.5
Q ss_pred eeEEEEEEEEecCCCCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
|+.++++++.++ .+|||+|+. .|.|.||||++++||+..+|++|||.||+|+ +..+.+.++.
T Consensus 5 ~~~~v~~vi~~~---~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~ 67 (159)
T 3f6a_A 5 RHFTVSVFIVCK---DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGL-------NVTLYNPIDI 67 (159)
T ss_dssp SCEEEEEEEEET---TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCC-------CCEECCCCCH
T ss_pred ceEEEEEEEEEC---CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCC-------Cceecccccc
Confidence 555666666663 399999986 4899999999999999999999999999999 4556666654
No 7
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.18 E-value=1e-10 Score=92.69 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=45.2
Q ss_pred EEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 63 CVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 63 sV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
.+.++++.++. .|||+|+..|.|.||||++++||+..+|++|||.||+|+. ....+.++.+
T Consensus 17 ~~~~~ii~~~~---~vLL~~r~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~-------~~~~~~l~~~ 77 (163)
T 3f13_A 17 RRATAIIEMPD---GVLVTASRGGRYNLPGGKANRGELRSQALIREIREETGLR-------INSMLYLFDH 77 (163)
T ss_dssp EEEEEECEETT---EEEEEECC---BBCSEEECCTTCCHHHHHHHHHHHHHCCC-------CCEEEEEEEE
T ss_pred EEEEEEEEeCC---EEEEEEECCCeEECCceeCCCCCCHHHHHHHHHHHHHCcc-------cceeEEEEEE
Confidence 34444444433 7999999899999999999999999999999999999993 3445556554
No 8
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.17 E-value=7.7e-11 Score=91.24 Aligned_cols=60 Identities=22% Similarity=0.375 Sum_probs=46.6
Q ss_pred hccCCCeeEEEEEEEEecCCCCeEEEEEecC------CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 55 YDAHGLRTCVEAVLLVELFKHPHLLLLQVRN------SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 55 y~~~GmRrsV~aVilvh~~~~phVLLlq~~~------~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+...+|++.+.+++++... .+|||+|+.. |.|.||||.+++||+..+|+.|||.||+|+.
T Consensus 20 ~~~~~~~~~~~~~~ii~~~--~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~ 85 (165)
T 3oga_A 20 FQSNAMRQRTIVCPLIQND--GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQ 85 (165)
T ss_dssp ----CCEEEEEEEEEEEET--TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSS
T ss_pred ccCCCcceEEEEEEEEeCC--CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCC
Confidence 3445776666666555543 4899998862 7899999999999999999999999999993
No 9
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.16 E-value=6.4e-11 Score=96.52 Aligned_cols=73 Identities=18% Similarity=0.372 Sum_probs=59.8
Q ss_pred hhccCCCeeEEEEEEEEecCCCCeEEEEEec--CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeee
Q 029260 54 NYDAHGLRTCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131 (196)
Q Consensus 54 ~y~~~GmRrsV~aVilvh~~~~phVLLlq~~--~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg 131 (196)
.|...+.+..|.+|++.. .+..+|||+|+. .+.|.||||++++||+..+|++|||.||+|+ ...+.++++
T Consensus 33 ~~~~~~~~~~~~~vi~~~-~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl-------~~~~~~~l~ 104 (194)
T 2fvv_A 33 TYDGDGYKKRAACLCFRS-ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV-------KGTLGRLVG 104 (194)
T ss_dssp CBCTTSCEEEEEEEEESS-TTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCE-------EEEEEEEEE
T ss_pred ccccCCccccEEEEEEEE-CCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCC-------ccccceEEE
Confidence 556667788887777632 334689999975 4899999999999999999999999999999 566778888
Q ss_pred eee
Q 029260 132 MWW 134 (196)
Q Consensus 132 ~Ww 134 (196)
.+.
T Consensus 105 ~~~ 107 (194)
T 2fvv_A 105 IFE 107 (194)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 10
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.16 E-value=1.5e-10 Score=90.01 Aligned_cols=74 Identities=26% Similarity=0.407 Sum_probs=53.4
Q ss_pred HhhhccCCCeeEEEEEEEEecCCCCeEEEEEec--CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeee
Q 029260 52 KSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGEC 129 (196)
Q Consensus 52 ~~~y~~~GmRrsV~aVilvh~~~~phVLLlq~~--~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~ 129 (196)
+..+....++..|.+|++ ++ .+|||+|+. .+.|.||||++++||+..+|++|||.||+|+ ...+.+.
T Consensus 14 ~~~~~~~~~~~~v~~ii~-~~---~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~ 82 (171)
T 3id9_A 14 RRLYIENIMQVRVTGILI-ED---EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGL-------EVKIKKL 82 (171)
T ss_dssp --------CEEEEEEEEE-ET---TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEE
T ss_pred hhhccCCceEEEEEEEEE-EC---CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCC-------ccccceE
Confidence 334444445666666554 43 489999986 5899999999999999999999999999999 4567777
Q ss_pred eeeeecc
Q 029260 130 LGMWWKP 136 (196)
Q Consensus 130 lg~WwRp 136 (196)
++.+..+
T Consensus 83 ~~~~~~~ 89 (171)
T 3id9_A 83 LYVCDKP 89 (171)
T ss_dssp EEEEEET
T ss_pred EEEEccc
Confidence 7775443
No 11
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.15 E-value=6.5e-11 Score=91.41 Aligned_cols=53 Identities=21% Similarity=0.364 Sum_probs=45.2
Q ss_pred EEEEEEEe-------cCCCCeEEEEEecC--CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 64 VEAVLLVE-------LFKHPHLLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 64 V~aVilvh-------~~~~phVLLlq~~~--~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.|+|+.. +++...|||+|+.. +.|.||||++++||+..+|+.||+.||+|+.
T Consensus 5 a~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~ 66 (155)
T 3u53_A 5 ACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIE 66 (155)
T ss_dssp EEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCC
T ss_pred EeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCc
Confidence 34666654 46778999999874 6899999999999999999999999999984
No 12
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.14 E-value=7.8e-11 Score=87.86 Aligned_cols=56 Identities=21% Similarity=0.326 Sum_probs=45.3
Q ss_pred eeEEEEEEEEecCCCCeEEEEEecC--CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~~--~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+++|.+|++..+.+..+|||+|+.. +.|.||||++++||+..+|++||+.||+|+.
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 60 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANIT 60 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 3445555554444457899999864 4999999999999999999999999999993
No 13
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.14 E-value=1.1e-10 Score=88.04 Aligned_cols=82 Identities=24% Similarity=0.289 Sum_probs=58.2
Q ss_pred EEEEEEEEecCCCCeEEEEEec-------CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeec
Q 029260 63 CVEAVLLVELFKHPHLLLLQVR-------NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (196)
Q Consensus 63 sV~aVilvh~~~~phVLLlq~~-------~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwR 135 (196)
.++++++.++ .+|||+|+. .|.|.||||++++||+..+|+.||+.||+|+ .....+.++.+-.
T Consensus 7 ~~v~~vi~~~---~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl-------~~~~~~~~~~~~~ 76 (140)
T 3gwy_A 7 EVVAAVIRLG---EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDY-------VIEVGEKLLTVHH 76 (140)
T ss_dssp EEEEEEEEET---TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEEEEC
T ss_pred EEEEEEEEeC---CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCc-------EEEeceEEEEEEE
Confidence 3444444443 489999985 2679999999999999999999999999999 5666677776421
Q ss_pred cCCCcCCCCCCCCCCCCceeeeEEEEEEcCCc
Q 029260 136 PDFETLLFPYFPPNVKRPKECTKLFLVKLPVS 167 (196)
Q Consensus 136 p~Fet~~yPYlP~Hit~pKE~~klylV~Lpe~ 167 (196)
. ++ | -.....+|.+.+...
T Consensus 77 -~-----~~----~---~~~~~~~f~~~~~~~ 95 (140)
T 3gwy_A 77 -T-----YP----D---FEITMHAFLCHPVGQ 95 (140)
T ss_dssp -C-----CS----S---CCEEEEEEEEEECCS
T ss_pred -E-----eC----C---ceEEEEEEEEEecCC
Confidence 1 11 1 234567888877654
No 14
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.14 E-value=3.1e-10 Score=86.90 Aligned_cols=66 Identities=29% Similarity=0.404 Sum_probs=52.5
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEEecC----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeee
Q 029260 59 GLRTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (196)
Q Consensus 59 GmRrsV~aVilvh~~~~phVLLlq~~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~Ww 134 (196)
.+.+.|.++++ +. ..+|||+|+.. +.|.||||++++||+..+|++||+.||+|+ ...+.+.++.+.
T Consensus 18 ~~~~~v~~~i~-~~--~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl-------~~~~~~~~~~~~ 87 (156)
T 3gg6_A 18 NVCYVVLAVFL-SE--QDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGL-------HCEPETLLSVEE 87 (156)
T ss_dssp TCEEEEEEECB-CT--TSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCE-------EEEEEEEEEEEE
T ss_pred ceEEEEEEEEE-eC--CCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCc-------eeEeeeEEEEEc
Confidence 34455555554 32 24899999864 899999999999999999999999999999 567778888764
No 15
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.13 E-value=8.3e-11 Score=89.45 Aligned_cols=58 Identities=17% Similarity=0.230 Sum_probs=45.0
Q ss_pred CCeeE--EEEEEEEecCCCCeEEEEEecC-CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 59 GLRTC--VEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 59 GmRrs--V~aVilvh~~~~phVLLlq~~~-~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
||++. |.+|++....+..+|||+|+.. |.|.||||++++||+..+|++||+.||+|+.
T Consensus 1 gm~~~~~v~vvi~~~~~~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~ 61 (149)
T 3son_A 1 GMRQPFQVLVIPFIKTEANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLD 61 (149)
T ss_dssp ---CCCEEEEEEEEECSSSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCC
T ss_pred CCCCceEEEEEEEEecCCCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCC
Confidence 56444 4444444445566899999874 8999999999999999999999999999994
No 16
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.11 E-value=4.4e-10 Score=85.52 Aligned_cols=102 Identities=15% Similarity=0.116 Sum_probs=63.5
Q ss_pred EEEEEEEEecCCCCeEEEEEec---CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeeccCCC
Q 029260 63 CVEAVLLVELFKHPHLLLLQVR---NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139 (196)
Q Consensus 63 sV~aVilvh~~~~phVLLlq~~---~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwRp~Fe 139 (196)
.++++++.++ .+|||+|+. .+.|.||||++++||+..+|++||+.||+|+. ..+.+.++..-.
T Consensus 6 ~~v~~ii~~~---~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~-------~~~~~~~~~~~~---- 71 (153)
T 3shd_A 6 VTVACVVHAE---GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGIS-------AQPQHFIRMHQW---- 71 (153)
T ss_dssp EEEEEEEEET---TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCC-------CCCCEEEEEEEE----
T ss_pred eEEEEEEEeC---CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcc-------cccCcEEEEEEE----
Confidence 3334444443 389999973 46899999999999999999999999999993 333455554310
Q ss_pred cCCCCCCCCCCCCceeeeEEEEEEcCCceEEeeC--CCCeEEeccccee
Q 029260 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP--KNLKLLAVPLCQI 186 (196)
Q Consensus 140 t~~yPYlP~Hit~pKE~~klylV~Lpe~~~f~vP--kn~kL~AvPLfel 186 (196)
.+| ..-..+..+|.+.+......... ....+.-+|+=||
T Consensus 72 --~~~------~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 72 --IAP------DKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp --CCT------TSCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred --ecC------CCceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh
Confidence 111 11233456788777665322221 2233445555555
No 17
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.11 E-value=1.2e-10 Score=87.56 Aligned_cols=89 Identities=17% Similarity=0.256 Sum_probs=62.7
Q ss_pred eeEEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeeccCCCc
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwRp~Fet 140 (196)
|.+|.+||+.+ +..+|||.|+.+|.|.||||.+++||+..+++.||+.||+|+ ...+.+.++.+- .
T Consensus 18 ~~~~~~vi~~~--~~~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~~-----~ 83 (148)
T 2azw_A 18 RYAAYIIVSKP--ENNTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGI-------SVEIGCYLGEAD-----E 83 (148)
T ss_dssp CCEEEEECEEG--GGTEEEEEECTTSCEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEE-----E
T ss_pred eeEEEEEEECC--CCCeEEEEEcCCCCEeCCCcccCCCCCHHHHHHHHHHHHhCC-------eeEeeeEEEEEE-----E
Confidence 45555555432 235899999988999999999999999999999999999999 556666676531 0
Q ss_pred CCCCCCCCCC-CCceeeeEEEEEEcCC
Q 029260 141 LLFPYFPPNV-KRPKECTKLFLVKLPV 166 (196)
Q Consensus 141 ~~yPYlP~Hi-t~pKE~~klylV~Lpe 166 (196)
+.| ++|. +.-.+...+|.++...
T Consensus 84 ~~~---~~~~~~~~~~~~~~~~~~~~~ 107 (148)
T 2azw_A 84 YFY---SNHRQTAYYNPGYFYVANTWR 107 (148)
T ss_dssp EEE---ETTTTEEEEEEEEEEEEEEEE
T ss_pred EEc---CCCCCcceEEEEEEEEEEcCc
Confidence 111 1222 2345567788877643
No 18
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.11 E-value=1.1e-09 Score=83.46 Aligned_cols=87 Identities=18% Similarity=0.288 Sum_probs=61.3
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecC--------CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeee
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRN--------SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~--------~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg 131 (196)
+.+.+.++++++.. .+|||.|+.. +.|.||||++++||+..+++.||+.||+|+ .....+.++
T Consensus 11 ~~~~~~~~vi~~~~--~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~l~ 81 (159)
T 1sjy_A 11 VELRAAGVVLLNER--GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGL-------RVRPVKFLG 81 (159)
T ss_dssp CCEEEEEEEEBCTT--CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSC-------CEEEEEEEE
T ss_pred eEEEeEEEEEEeCC--CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCc-------cceeeEEEE
Confidence 33444445554432 4799998863 799999999999999999999999999999 455666777
Q ss_pred eeeccCCCcCCCCCCCCCCCCceeeeEEEEEEcCCc
Q 029260 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVS 167 (196)
Q Consensus 132 ~WwRp~Fet~~yPYlP~Hit~pKE~~klylV~Lpe~ 167 (196)
.+... | + |- -.....+|.+.++..
T Consensus 82 ~~~~~-~--------~-~~--~~~~~~~f~~~~~~~ 105 (159)
T 1sjy_A 82 AYLGR-F--------P-DG--VLILRHVWLAEPEPG 105 (159)
T ss_dssp EEEEE-C--------T-TS--CEEEEEEEEEEECSS
T ss_pred EEecc-c--------C-CC--ceEEEEEEEEEccCC
Confidence 65432 1 1 11 345667888777544
No 19
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.10 E-value=1.2e-10 Score=92.76 Aligned_cols=68 Identities=24% Similarity=0.256 Sum_probs=53.9
Q ss_pred eEEEEEEEEecCC----CCeEEEEEe-----------cCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEE
Q 029260 62 TCVEAVLLVELFK----HPHLLLLQV-----------RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEV 126 (196)
Q Consensus 62 rsV~aVilvh~~~----~phVLLlq~-----------~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~V 126 (196)
.+|.+|++....+ ..+|||+|+ ..+.|.||||.+++||+..+|++||+.||+|+. ..+
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~-------~~~ 100 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLT-------DIP 100 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCC-------SCC
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCC-------Ccc
Confidence 6777777765544 568999999 248999999999999999999999999999993 344
Q ss_pred eeeeeeeecc
Q 029260 127 GECLGMWWKP 136 (196)
Q Consensus 127 ge~lg~WwRp 136 (196)
.+.++.+..+
T Consensus 101 ~~~l~~~~~~ 110 (187)
T 3i9x_A 101 LIPFGVFDKP 110 (187)
T ss_dssp CEEEEEECCT
T ss_pred eEEEEEEcCC
Confidence 5667765433
No 20
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.08 E-value=5.4e-10 Score=83.97 Aligned_cols=67 Identities=15% Similarity=0.233 Sum_probs=50.8
Q ss_pred CeeEEEEEEEEecCCCCe--EEEEEecC--CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeee
Q 029260 60 LRTCVEAVLLVELFKHPH--LLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (196)
Q Consensus 60 mRrsV~aVilvh~~~~ph--VLLlq~~~--~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~Ww 134 (196)
.+.+|.+||+..+.+ .+ |||+|+.. +.|.||||++++||+..+|++||+.||+|+ ...+.+.++.+-
T Consensus 8 p~~~v~~vi~~~~~~-~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~~ 78 (139)
T 2yyh_A 8 PLLATDVIIRLWDGE-NFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGL-------EVRLHKLMGVYS 78 (139)
T ss_dssp CEEEEEEEEEEEETT-EEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCC-------CCEEEEEEEEEC
T ss_pred CeEEEEEEEEEEcCC-CcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCC-------CcccceEEEEEC
Confidence 355666666542222 24 99999863 459999999999999999999999999999 456667777653
No 21
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.06 E-value=3.6e-10 Score=86.47 Aligned_cols=53 Identities=26% Similarity=0.425 Sum_probs=42.6
Q ss_pred eeEEEEEEEEecCCCCeEEEEEecC------CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVRN------SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~~------~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.+|.+|| .+. ..+|||+|+.. |.|.||||++++||+..+|+.||+.||+|+.
T Consensus 8 ~~~v~~vi-~~~--~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~ 66 (153)
T 3grn_A 8 IISVYALI-RNE--KGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGIT 66 (153)
T ss_dssp EEEEEEEE-ECT--TCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred EEEEEEEE-EcC--CCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcE
Confidence 34444444 332 24899999863 7999999999999999999999999999993
No 22
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.05 E-value=2.1e-10 Score=91.55 Aligned_cols=59 Identities=24% Similarity=0.335 Sum_probs=48.8
Q ss_pred cCCCeeEEEEEEEEecCCCCeEEEEEec------CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 57 AHGLRTCVEAVLLVELFKHPHLLLLQVR------NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 57 ~~GmRrsV~aVilvh~~~~phVLLlq~~------~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.+.|+++.+|++ ...+.++|||+|+. .|.|.||||++++||+..+|++||+.||+|+.
T Consensus 30 ~~~~~~~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~ 94 (194)
T 1nqz_A 30 LPHYRRAAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALD 94 (194)
T ss_dssp ---CEEEEEEEEE-ESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred CCCCceEEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCC
Confidence 3467777777777 56666799999985 38999999999999999999999999999994
No 23
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.05 E-value=7.7e-10 Score=90.20 Aligned_cols=64 Identities=17% Similarity=0.265 Sum_probs=50.8
Q ss_pred eEEEEEEEEecCCCCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeecc
Q 029260 62 TCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKP 136 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwRp 136 (196)
.+|.||++ ++ .+|||+|+. .|.|.||||++++||+..+|++||+.||+|+ +..+.+.++.+...
T Consensus 69 ~~v~~vv~-~~---~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~v~~~~~l~~~~~~ 133 (205)
T 3q1p_A 69 VDIRAVVF-QN---EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGY-------EVDHFKLLAIFDKE 133 (205)
T ss_dssp EEEEEEEE-ET---TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEEHH
T ss_pred ceEEEEEE-EC---CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCC-------ccccceEEEEEecc
Confidence 34444444 43 399999986 6899999999999999999999999999999 56777888876543
No 24
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.04 E-value=3.5e-10 Score=87.38 Aligned_cols=59 Identities=22% Similarity=0.304 Sum_probs=46.9
Q ss_pred EEEEEEEEecCCCCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 63 CVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 63 sV~aVilvh~~~~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
+|.|||+ ++ .+|||+|+. .|.|.||||++++||+..+|+.||+.||+|+ +..+...++.
T Consensus 3 ~~~~vi~-~~---~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~ 62 (156)
T 1k2e_A 3 VTSGVLV-EN---GKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGI-------VVEPIGFTYG 62 (156)
T ss_dssp EEEEECE-ET---TEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEECCCCCC
T ss_pred EEEEEEE-EC---CEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCC-------cceeccceee
Confidence 4455444 42 489999986 4899999999999999999999999999998 4555555543
No 25
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.04 E-value=4.4e-10 Score=93.68 Aligned_cols=69 Identities=22% Similarity=0.141 Sum_probs=55.8
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecC----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeec
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwR 135 (196)
.+.+|.+||+.-+.+..+|||+|+.. |.|.||||.+++||+..+|++|||.||+|+. ....+.++.+..
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~-------~~~~~~l~~~~~ 84 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLE-------NVYMEQVGAFGA 84 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCC-------SCEEEEEEEECC
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCC-------CCceEEEEEeCC
Confidence 36777888876555667999999874 7899999999999999999999999999993 334566776543
No 26
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.04 E-value=6.2e-10 Score=84.32 Aligned_cols=51 Identities=24% Similarity=0.349 Sum_probs=44.2
Q ss_pred CeEEEEEecC----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 76 PHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 76 phVLLlq~~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
.+|||+|+.. +.|.||||++++||+..+|++||+.||+|+ ...+.+.++.+
T Consensus 19 ~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~ 73 (153)
T 2b0v_A 19 DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGH-------SFLPEVLTGIY 73 (153)
T ss_dssp TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSE-------EEEEEEEEEEE
T ss_pred CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCc-------EeccceEEEEE
Confidence 3899998863 379999999999999999999999999999 56667777765
No 27
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.04 E-value=5.4e-10 Score=89.53 Aligned_cols=60 Identities=17% Similarity=0.238 Sum_probs=47.6
Q ss_pred EEEEEEEecCCCCeEEEEEec----CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 64 VEAVLLVELFKHPHLLLLQVR----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 64 V~aVilvh~~~~phVLLlq~~----~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
++++++.++ -+|||+|+. .+.|.||||++++||+..++++|||.||+|+ ...+...++.+
T Consensus 42 ~v~~ii~~~---~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~ 105 (189)
T 3cng_A 42 IVGCIPEWE---NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANA-------RVEIRELYAVY 105 (189)
T ss_dssp EEEEEEEET---TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEEE
T ss_pred EEEEEEEeC---CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCC-------ccccceeEEEE
Confidence 344444443 389999986 5799999999999999999999999999999 45556666654
No 28
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.04 E-value=7.9e-10 Score=85.61 Aligned_cols=63 Identities=21% Similarity=0.256 Sum_probs=48.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEEec----CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeee
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVR----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~----~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~Ww 134 (196)
|.+|. +++.++ .+|||+|+. .+.|.||||.+++||+..+|++|||.||+|+ ...+.+.++.+.
T Consensus 29 ~~~v~-~vi~~~---~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~~ 95 (157)
T 4dyw_A 29 RVGCG-AAIVRD---GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGI-------ALERATLLCVVD 95 (157)
T ss_dssp EEEEE-EEEEET---TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSC-------EEESCEEEEEEE
T ss_pred eeEEE-EEEEEC---CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCc-------ccccCcEEEEEE
Confidence 44444 444443 489999986 4899999999999999999999999999999 445556666643
No 29
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.04 E-value=1.4e-09 Score=85.25 Aligned_cols=57 Identities=14% Similarity=0.277 Sum_probs=46.6
Q ss_pred CCCeeEEEEEEEEecCCCCeEEEEEec------CCeeec-CCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 58 HGLRTCVEAVLLVELFKHPHLLLLQVR------NSIFKL-PGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 58 ~GmRrsV~aVilvh~~~~phVLLlq~~------~~~~~L-PGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
.++++.+.+|++.+..+ +|||.++. .|.|.| |||++++||+..+|++||+.||+|+.
T Consensus 33 ~~~~~~~~~v~i~~~~~--~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~ 96 (180)
T 2fkb_A 33 QCLRHRATYIVVHDGMG--KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIA 96 (180)
T ss_dssp HTCCEEEEEEEEECSSS--CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCB
T ss_pred cCceeeEEEEEEECCCC--EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 46666677777765443 68888775 257999 99999999999999999999999994
No 30
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.03 E-value=1.6e-10 Score=84.88 Aligned_cols=52 Identities=13% Similarity=0.342 Sum_probs=42.3
Q ss_pred eEEEEEEEEecCCCCeEEEEEecC-----CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 62 TCVEAVLLVELFKHPHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~~~-----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.+.++++ +.. .+|||.|+.. |.|.||||++++||+..+++.||+.||+|+.
T Consensus 5 ~~~~~ii~-~~~--~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~ 61 (129)
T 1mut_A 5 QIAVGIIR-NEN--NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGIT 61 (129)
T ss_dssp ECCCEECE-ETT--TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCS
T ss_pred EEEEEEEE-ecC--CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCc
Confidence 34445554 332 4899999863 8999999999999999999999999999993
No 31
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.03 E-value=2.7e-10 Score=87.18 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=41.5
Q ss_pred eEEEEEEEEecCCCCeEEEEEe-cC----CeeecCCcccCCCCChHHHHHHHHHHHhCC
Q 029260 62 TCVEAVLLVELFKHPHLLLLQV-RN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~-~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~ 115 (196)
..+++|++++..+ +|||++. +. +.|.||||++++||+..+|++|||.||+|+
T Consensus 5 ~~~v~vi~~~~~~--~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl 61 (145)
T 2w4e_A 5 PRAVFILPVTAQG--EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGG 61 (145)
T ss_dssp CEEEEEEEEETTS--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CCEEEEEEEcCCC--EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCC
Confidence 4456666665543 6877754 32 389999999999999999999999999998
No 32
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.02 E-value=7.8e-10 Score=84.44 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=49.3
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
++.+|.+||+ ++ .+|||.|+ .+.|.||||++++||+..+|++||+.||+|+ ...+.+.++.
T Consensus 18 ~~~~~~~ii~-~~---~~vLl~~r-~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl-------~~~~~~~~~~ 78 (154)
T 2pqv_A 18 FGVRATALIV-QN---HKLLVTKD-KGKYYTIGGAIQVNESTEDAVVREVKEELGV-------KAQAGQLAFV 78 (154)
T ss_dssp EEEEEEECCE-ET---TEEEEEEE-TTEEECEEEECBTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEE
T ss_pred EeEEEEEEEE-EC---CEEEEEec-CCeEECcccCcCCCCCHHHHHHHHHHHHhCC-------eeeeceEEEE
Confidence 4566666665 33 48999998 8899999999999999999999999999999 4455555554
No 33
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.02 E-value=6.7e-10 Score=93.47 Aligned_cols=72 Identities=28% Similarity=0.221 Sum_probs=58.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEEecC----CeeecCCcccCC--CCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeee
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRP--GESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~~----~~~~LPGGrl~~--gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~Ww 134 (196)
..+|.+||+.-..+..+|||+|+.. |.|.||||.+++ ||+..+|++|||.||+|+. ....+.+++|.
T Consensus 22 ~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~-------~~~~~~l~~~~ 94 (240)
T 3gz5_A 22 LLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVV-------PPYIEQLCTVG 94 (240)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSC-------CSEEEEEEEEE
T ss_pred ccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCC-------CCceeeEEEeC
Confidence 5678888876556678999999874 889999999999 9999999999999999993 34566777776
Q ss_pred ccCCC
Q 029260 135 KPDFE 139 (196)
Q Consensus 135 Rp~Fe 139 (196)
.+..+
T Consensus 95 ~~~r~ 99 (240)
T 3gz5_A 95 NNSRD 99 (240)
T ss_dssp ESSSS
T ss_pred CCccC
Confidence 65543
No 34
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.00 E-value=1.1e-09 Score=81.52 Aligned_cols=50 Identities=30% Similarity=0.547 Sum_probs=42.4
Q ss_pred eEEEEEecC-----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 77 HLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 77 hVLLlq~~~-----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
+|||.|+.. |.|.||||.+++||+..+++.||+.||+|+ ...+.+.++..
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~~ 75 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGI-------EATVGEYVASH 75 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCE-------EEECCEEEEEE
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCC-------eeecccEEEEE
Confidence 899999853 899999999999999999999999999998 34445566653
No 35
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.00 E-value=1.4e-09 Score=81.86 Aligned_cols=61 Identities=30% Similarity=0.382 Sum_probs=47.6
Q ss_pred eEEEEEEEEecCCCCeEEEEEecC-----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 62 TCVEAVLLVELFKHPHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~~~-----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
..|.++++.++ .+|||.|+.. |.|.||||.+++||+..+|+.||+.||+|+ .....+.++.
T Consensus 22 ~~~~~~i~~~~---~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~ 87 (153)
T 3ees_A 22 IPVVAGFLRKD---GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGI-------EAEVGELKLA 87 (153)
T ss_dssp EEEEEEEEEET---TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSC-------EEECCCEEEE
T ss_pred EEEEEEEEEEC---CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCC-------ccccCceEEE
Confidence 34555555443 4899999864 799999999999999999999999999998 3444445554
No 36
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.00 E-value=7.9e-10 Score=89.23 Aligned_cols=63 Identities=22% Similarity=0.307 Sum_probs=49.6
Q ss_pred eeEEEEEEEEecCCCCeEEEEEecC---CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVRN---SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~~---~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
+.+|.++++. +. ..+|||+|+.. +.|.||||++++||+..+|++||+.||+|+ +..+.+.++.
T Consensus 26 ~v~v~~~v~~-~~-~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl-------~~~~~~l~~~ 91 (199)
T 3h95_A 26 QVGVAGAVFD-ES-TRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGI-------KSEFRSVLSI 91 (199)
T ss_dssp CCEEEEEEEE-TT-TTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEE
T ss_pred cceEEEEEEe-CC-CCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCC-------ccccceEEEE
Confidence 4455555553 22 34999999875 899999999999999999999999999999 4556666664
No 37
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.00 E-value=7.4e-10 Score=87.98 Aligned_cols=53 Identities=23% Similarity=0.312 Sum_probs=42.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEEec----CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVR----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~----~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
++.+.++++.++ .+|||+|+. .|.|.||||++++||+..+|++||+.||+|+.
T Consensus 24 ~~~~~~~vi~~~---~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~ 80 (176)
T 3q93_A 24 SRLYTLVLVLQP---QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 80 (176)
T ss_dssp EEEEEEEEEECS---SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCE
T ss_pred CcEEEEEEEEeC---CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCc
Confidence 444444444333 389999875 37999999999999999999999999999993
No 38
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=98.99 E-value=9.3e-10 Score=89.76 Aligned_cols=64 Identities=20% Similarity=0.323 Sum_probs=53.0
Q ss_pred eeEEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeec
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwR 135 (196)
+.+|.+||+ ++ .+|||+|+..+.|.||||++++||+..+|+.||+.||+|+ +....+.++.+..
T Consensus 70 ~~~v~~vv~-~~---~~vLLvrr~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~l~~~~~ 133 (206)
T 3o8s_A 70 KLDTRAAIF-QE---DKILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGL-------DVEAQRVVAILDK 133 (206)
T ss_dssp EEEEEEEEE-ET---TEEEEEECTTSCEECSEEECCTTSCHHHHHHHHHHHHHCE-------EEEEEEEEEEEEH
T ss_pred CccEEEEEE-EC---CEEEEEEecCCeEECCeeccCCCCCHHHHHHHHHHHHHCC-------cceeeeEEEEEec
Confidence 445555554 43 4999999988999999999999999999999999999999 5677778887653
No 39
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=98.99 E-value=5.5e-10 Score=83.77 Aligned_cols=51 Identities=33% Similarity=0.582 Sum_probs=41.5
Q ss_pred EEEEEEEecCCCCeEEEEEecC-----CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 64 VEAVLLVELFKHPHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 64 V~aVilvh~~~~phVLLlq~~~-----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.++++++.. .+|||.|+.. |.|.||||++++||+..+|+.||+.||+|+.
T Consensus 10 ~~~~vi~~~~--~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~ 65 (144)
T 3r03_A 10 VTAAALIDPD--GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVD 65 (144)
T ss_dssp EEEEEEBCTT--SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCB
T ss_pred EEEEEEEcCC--CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCce
Confidence 3344444333 4799999863 7899999999999999999999999999984
No 40
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=98.99 E-value=7.4e-10 Score=82.98 Aligned_cols=53 Identities=17% Similarity=0.346 Sum_probs=42.8
Q ss_pred eEEEEEEEEecCCCCeEEEEEec--CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 62 TCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~~--~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
.+|.++++ +. +..+|||+|+. .|.|.||||++++||+..+|++||+.||+|+.
T Consensus 10 ~~v~~~i~-~~-~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 64 (150)
T 2o1c_A 10 VSILVVIY-AQ-DTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTID 64 (150)
T ss_dssp EEEEEEEE-ET-TTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred eEEEEEEE-eC-CCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCC
Confidence 34544444 32 22489999986 48999999999999999999999999999983
No 41
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=98.98 E-value=8.3e-10 Score=87.04 Aligned_cols=52 Identities=21% Similarity=0.330 Sum_probs=42.0
Q ss_pred EEEEEEEEecCCCCeEEEEEec-----CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 63 CVEAVLLVELFKHPHLLLLQVR-----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 63 sV~aVilvh~~~~phVLLlq~~-----~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
.+++|++++.. .+|||+|+. .+.|.||||.+++||+..+|++||+.||+|+.
T Consensus 42 ~~v~v~i~~~~--~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~ 98 (182)
T 2yvp_A 42 AASFVLPVTER--GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAE 98 (182)
T ss_dssp EEEEEEEBCTT--SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEE
T ss_pred CEEEEEEEcCC--CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCC
Confidence 34445554433 379999875 36899999999999999999999999999983
No 42
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=98.98 E-value=1.3e-09 Score=87.61 Aligned_cols=55 Identities=9% Similarity=0.199 Sum_probs=45.0
Q ss_pred eeEEEEEEEEecCCCCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
++.+.++++++. +..+|||+|+. .|.|.||||++++||+..+|++||+.||+|+.
T Consensus 44 ~h~~~~~vv~~~-~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 44 AHLTSSAFAVNK-ERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVK 99 (197)
T ss_dssp EEEEEEEEEECT-TSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCS
T ss_pred ccEEEEEEEEEC-CCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 444555555543 33599999886 58999999999999999999999999999994
No 43
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=98.97 E-value=8.2e-10 Score=84.86 Aligned_cols=41 Identities=29% Similarity=0.583 Sum_probs=37.7
Q ss_pred CeEEEEEecC-----CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 76 PHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 76 phVLLlq~~~-----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
.+|||.|+.. |.|.||||++++||+..+|+.||+.||+|+.
T Consensus 41 ~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 86 (158)
T 3hhj_A 41 NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVH 86 (158)
T ss_dssp SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCB
T ss_pred CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcE
Confidence 4799999873 6999999999999999999999999999984
No 44
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=98.97 E-value=1.1e-09 Score=88.21 Aligned_cols=53 Identities=26% Similarity=0.478 Sum_probs=43.5
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
|.+.|.+|| .++ .+|||+|+. .|.|.||||++++||+..+|++|||.||+|+.
T Consensus 3 ~~~v~~~vi-~~~---~~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~ 56 (188)
T 3fk9_A 3 LQRVTNCIV-VDH---DQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGIT 56 (188)
T ss_dssp CCEEEEEEE-EET---TEEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCE
T ss_pred ceEEEEEEE-EEC---CEEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCC
Confidence 445444444 443 389999985 58999999999999999999999999999983
No 45
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=98.95 E-value=1e-09 Score=83.70 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=45.4
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEEecC--CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 59 GLRTCVEAVLLVELFKHPHLLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 59 GmRrsV~aVilvh~~~~phVLLlq~~~--~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
..|.+|.++++ +.. -+|||+|+.. +.|.||||++++||+..+|++||+.||+|+.
T Consensus 12 ~~~~~v~~~i~-~~~--~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 68 (165)
T 1f3y_A 12 GYRRNVGICLM-NND--KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVT 68 (165)
T ss_dssp SCCCEEEEEEE-CTT--SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred ceeeeEEEEEE-CCC--CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCC
Confidence 34667666655 333 4899999864 8999999999999999999999999999993
No 46
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=98.95 E-value=3.6e-09 Score=86.04 Aligned_cols=106 Identities=15% Similarity=0.139 Sum_probs=68.6
Q ss_pred eeEEEEEEEEecCCCCeEEEEEec-C----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeec
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVR-N----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~-~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwR 135 (196)
+..+++|+++++. +|||+++. . +.|.||||++++||+..+|++|||.||+|+ .....+.++.++.
T Consensus 48 ~~~av~vl~~~~~---~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl-------~~~~~~~l~~~~~ 117 (198)
T 1vhz_A 48 NREAVMIVPIVDD---HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF-------GANDLTFLKKLSM 117 (198)
T ss_dssp CCCEEEEEEEETT---EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEEC
T ss_pred CCCEEEEEEEECC---EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCC-------CcCceEEEEEEeC
Confidence 4456666666544 99999763 2 479999999999999999999999999998 4455567777652
Q ss_pred cCCCcCCCCCCCCCCCCceeeeEEEEEEcCCceEEee--CCCCeEEecccceeecC
Q 029260 136 PDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFV--PKNLKLLAVPLCQIHEN 189 (196)
Q Consensus 136 p~Fet~~yPYlP~Hit~pKE~~klylV~Lpe~~~f~v--Pkn~kL~AvPLfelydN 189 (196)
. |.+ ..+...+|++.......... .....+.-+|+=|+.+-
T Consensus 118 ~----------~~~---~~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 160 (198)
T 1vhz_A 118 A----------PSY---FSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDL 160 (198)
T ss_dssp C----------TTT---CCCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGG
T ss_pred C----------CCc---cCcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHH
Confidence 1 111 23456777776432211111 12234566676666543
No 47
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=98.93 E-value=7.4e-09 Score=88.63 Aligned_cols=56 Identities=25% Similarity=0.321 Sum_probs=48.5
Q ss_pred CeeEEEEEEEEecCC--CCeEEEEEecC----CeeecCCcccCCCCChHHHHHHHHHHHhCC
Q 029260 60 LRTCVEAVLLVELFK--HPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (196)
Q Consensus 60 mRrsV~aVilvh~~~--~phVLLlq~~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~ 115 (196)
...+|.+||+....+ ..+|||+++.+ |.|.||||.+++||+..+|+.|||.||+|+
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl 99 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGV 99 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCC
Confidence 356788888775544 67999999874 789999999999999999999999999997
No 48
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=98.93 E-value=1.5e-09 Score=82.69 Aligned_cols=54 Identities=20% Similarity=0.290 Sum_probs=44.5
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecC----CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
.+.+|.+|++ +. ..+|||.|+.. +.|.||||++++||+..+|++||+.||+|+.
T Consensus 17 ~~~~v~~vi~-~~--~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~ 74 (160)
T 1rya_A 17 PLVSLDFIVE-NS--RGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLR 74 (160)
T ss_dssp CEEEEEEEEE-CT--TSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSC
T ss_pred cEEEEEEEEE-cC--CCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 4556666655 32 34899999864 7999999999999999999999999999994
No 49
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=98.92 E-value=1.8e-09 Score=84.86 Aligned_cols=55 Identities=24% Similarity=0.394 Sum_probs=44.5
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 59 GLRTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 59 GmRrsV~aVilvh~~~~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
..|.+|.+|++ +.. -+|||+|+. .+.|.||||.+++||+..+++.|||.||+|+.
T Consensus 6 ~~~~~v~~~i~-~~~--~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~ 61 (164)
T 2kdv_A 6 GYRPNVGIVIC-NRQ--GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLS 61 (164)
T ss_dssp SEEEEEEEEEE-CTT--SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEEEEE-ccC--CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCC
Confidence 44565555554 332 389998886 48999999999999999999999999999993
No 50
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=98.90 E-value=1.7e-09 Score=86.11 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=45.3
Q ss_pred cCCCeeEEEEEEEEecCCCCeEEEEEec------CCeeec-CCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 57 AHGLRTCVEAVLLVELFKHPHLLLLQVR------NSIFKL-PGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 57 ~~GmRrsV~aVilvh~~~~phVLLlq~~------~~~~~L-PGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
..|+++.++++++++.. .+|||.|+. .|.|.| |||.+++||+..+|++||+.||+|+.
T Consensus 27 ~~~~~~~~v~~~i~~~~--g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~ 91 (190)
T 1hzt_A 27 ADTRLHLAFSSWLFNAK--GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVE 91 (190)
T ss_dssp ----CEECEEEEEECTT--CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCC
T ss_pred cCCceEEEEEEEEEcCC--CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCC
Confidence 55776666666666544 379998885 389999 99999999999999999999999984
No 51
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=98.90 E-value=4.2e-09 Score=81.85 Aligned_cols=53 Identities=17% Similarity=0.247 Sum_probs=42.4
Q ss_pred eEEEEEEEEecCCCCeEEEEEec------CCeee-cCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 62 TCVEAVLLVELFKHPHLLLLQVR------NSIFK-LPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~~------~~~~~-LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.+.+++++...+ +|||.|+. .|.|. ||||++++||+..+|++|||.||+|+.
T Consensus 34 ~~~v~v~i~~~~~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~ 93 (171)
T 1q27_A 34 VRVVNAFLRNSQG--QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVE 93 (171)
T ss_dssp CEEEEEEEEETTT--EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCT
T ss_pred ceEEEEEEECCCC--eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCc
Confidence 3344555544433 89998874 37898 999999999999999999999999994
No 52
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=98.88 E-value=3.6e-09 Score=82.19 Aligned_cols=64 Identities=19% Similarity=0.227 Sum_probs=47.2
Q ss_pred eEEEEEEEEecCCCCeEEEEEecC----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 62 TCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
+.+.++++.+ .+..+|||+|+.. |.|.||||++++||+..+|+.|||.||+|+. ....+.++.+
T Consensus 10 ~~~v~~vi~~-~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~-------~~~~~~~~~~ 77 (161)
T 3exq_A 10 ELVTMVMVTD-PETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLR-------LSGVTFCGTC 77 (161)
T ss_dssp EEEEEEEEBC-TTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCE-------ESCCEEEEEE
T ss_pred eEEEEEEEEe-CCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcE-------ecCCcEEEEE
Confidence 4444444433 3335899999875 4567999999999999999999999999993 3344556554
No 53
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=98.86 E-value=4.1e-09 Score=80.26 Aligned_cols=64 Identities=14% Similarity=0.199 Sum_probs=42.6
Q ss_pred eeEEEEEEEEecC-CCCeEEEEEecCC---eeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 61 RTCVEAVLLVELF-KHPHLLLLQVRNS---IFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 61 RrsV~aVilvh~~-~~phVLLlq~~~~---~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
+.+|.+|+ .++. +...|||.++..+ .|.||||++++||+..+|++||+.||+|+ ...+.+.++.
T Consensus 8 ~~~~~~ii-~~~~~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~ 75 (155)
T 2b06_A 8 ILTNICLI-EDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGL-------TIQNPQLVGI 75 (155)
T ss_dssp EEEEEEEE-EETTTTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSE-------EEESCEEEEE
T ss_pred EEEEEEEE-EECCCCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCc-------cccCCcEEEE
Confidence 33444444 3432 2334777777542 27999999999999999999999999998 3444455554
No 54
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=98.86 E-value=2.5e-09 Score=80.69 Aligned_cols=52 Identities=19% Similarity=0.391 Sum_probs=43.0
Q ss_pred EEEEEEEecCCCCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 64 VEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 64 V~aVilvh~~~~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.+++++++ +..+|||+|+. .|.|.||||.+++||+..+|+.||+.||+|+.
T Consensus 6 ~~~~~i~~~-~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~ 58 (146)
T 2jvb_A 6 VRGAAIFNE-NLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFD 58 (146)
T ss_dssp CEEEEEBCT-TSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCC
T ss_pred EEEEEEEeC-CCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCC
Confidence 445555443 23589999986 58999999999999999999999999999985
No 55
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=98.84 E-value=5.5e-09 Score=85.08 Aligned_cols=63 Identities=17% Similarity=0.236 Sum_probs=48.7
Q ss_pred eEEEEEEEEecCCCCeEEEEEec-----CCeeecCCcccC-CCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 62 TCVEAVLLVELFKHPHLLLLQVR-----NSIFKLPGGRLR-PGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~~-----~~~~~LPGGrl~-~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
..+++|++++. ..+|||+|+. .+.|.||||.++ +||+..+|++|||.||+|+ .....+.++.+
T Consensus 43 ~~av~v~i~~~--~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl-------~~~~~~~l~~~ 111 (207)
T 1mk1_A 43 FGAVAIVAMDD--NGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGL-------QASTWQVLVDL 111 (207)
T ss_dssp CCEEEEEECCT--TSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCE-------EEEEEEEEEEE
T ss_pred CCEEEEEEEcC--CCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCC-------cccccEEEEEE
Confidence 34555665543 3489998864 368999999999 9999999999999999998 44555667655
No 56
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=98.79 E-value=4.4e-09 Score=80.68 Aligned_cols=55 Identities=24% Similarity=0.269 Sum_probs=43.5
Q ss_pred eeEEEEEEEEecCCCCeEEEEEecC-----CeeecCCcccCCCCChH-HHHHHHHHHHhC-C
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVRN-----SIFKLPGGRLRPGESDI-YGLKRKLTRKLS-L 115 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~~-----~~~~LPGGrl~~gE~~~-e~LkReL~EeLg-~ 115 (196)
|..+++||+.+....-+|||.|+.. |.|.||||++++||+.. +++.|||.||+| +
T Consensus 19 ~~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l 80 (155)
T 1x51_A 19 ESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPL 80 (155)
T ss_dssp EEEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCc
Confidence 5566666654321134899999863 78999999999999996 999999999999 6
No 57
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=98.79 E-value=6.9e-09 Score=81.07 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=56.2
Q ss_pred EEEEEEEEecCCCCeEEEEEec-----CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeeccC
Q 029260 63 CVEAVLLVELFKHPHLLLLQVR-----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPD 137 (196)
Q Consensus 63 sV~aVilvh~~~~phVLLlq~~-----~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwRp~ 137 (196)
.+++|++++ . .+|||+++. .+.|.||||.+++||+..+|+.||+.||+|+ . ...+.++.++..
T Consensus 35 ~~v~vii~~-~--~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~-------~~~~~l~~~~~~- 102 (170)
T 1v8y_A 35 PAVAVIALR-E--GRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-S-------GDLTYLFSYFVS- 102 (170)
T ss_dssp CEEEEEEEE-T--TEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-E-------EEEEEEEEEESC-
T ss_pred CeEEEEEEE-C--CEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-C-------cCceeeEEEecC-
Confidence 356666666 2 389998863 3689999999999999999999999999997 2 234456665321
Q ss_pred CCcCCCCCCCCCCCCceeeeEEEEEEcCC
Q 029260 138 FETLLFPYFPPNVKRPKECTKLFLVKLPV 166 (196)
Q Consensus 138 Fet~~yPYlP~Hit~pKE~~klylV~Lpe 166 (196)
|. ...+...+|.+....
T Consensus 103 ---------~~---~~~~~~~~f~~~~~~ 119 (170)
T 1v8y_A 103 ---------PG---FTDEKTHVFLAENLK 119 (170)
T ss_dssp ---------TT---TBCCEEEEEEEEEEE
T ss_pred ---------CC---ccccEEEEEEEEecc
Confidence 11 123456777777543
No 58
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=98.78 E-value=3.2e-08 Score=81.08 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=42.2
Q ss_pred eEEEEEEEEecCCCCeEEEEEe-c---------CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 62 TCVEAVLLVELFKHPHLLLLQV-R---------NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~-~---------~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
..+++|++++.. ..+|||++. + .+.|.||||++++||++.+|++|||.||+|+.
T Consensus 57 ~~av~vl~~~~~-~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~ 120 (209)
T 1g0s_A 57 GHAAVLLPFDPV-RDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI 120 (209)
T ss_dssp CCEEEEEEEETT-TTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred CCEEEEEEEECC-CCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcc
Confidence 345666666522 248988754 2 25699999999999999999999999999994
No 59
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=98.77 E-value=8.3e-09 Score=88.69 Aligned_cols=57 Identities=18% Similarity=0.315 Sum_probs=46.8
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEec--CCeeecCCcccCCCCChHHHHHHHHHHHhCCCC
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNE 117 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~--~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~ 117 (196)
.+..|+|+++++. ...+|||+|+. .+.|.||||++++||+..+|++||+.||+|+..
T Consensus 99 ~~v~~v~avv~~~-~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~ 157 (271)
T 2a6t_A 99 TRIPVRGAIMLDM-SMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDC 157 (271)
T ss_dssp CCCCEEEEEEBCS-SSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCeEEEEEEEC-CCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCc
Confidence 3456667776653 23499999985 489999999999999999999999999999953
No 60
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=98.74 E-value=2.8e-08 Score=81.17 Aligned_cols=54 Identities=17% Similarity=0.282 Sum_probs=41.7
Q ss_pred EEEEEEEEecC-CCCeEEEEEe-c----CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 63 CVEAVLLVELF-KHPHLLLLQV-R----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 63 sV~aVilvh~~-~~phVLLlq~-~----~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+|..+.++.+. +..+|||++. + .+.|.||||.+++||+..+|++|||.||+|+.
T Consensus 63 av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~ 122 (212)
T 2dsc_A 63 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 122 (212)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred EEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCC
Confidence 44444444433 2568988864 2 25899999999999999999999999999993
No 61
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.71 E-value=3.1e-08 Score=87.19 Aligned_cols=53 Identities=13% Similarity=0.217 Sum_probs=46.8
Q ss_pred CCCCeEEEEEecC-CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 73 FKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 73 ~~~phVLLlq~~~-~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
.+..+|||+|+.. +.|.||||++++||+..+|++||+.||+|+ +..+.++++.
T Consensus 35 ~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl-------~~~~~~~l~~ 88 (364)
T 3fjy_A 35 LDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGS-------PVKLGPYLCE 88 (364)
T ss_dssp HTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSC-------CEEEEEEEEE
T ss_pred CCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCC-------eeeeccccce
Confidence 4467999999874 899999999999999999999999999999 5677777775
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.70 E-value=2.7e-08 Score=85.22 Aligned_cols=52 Identities=25% Similarity=0.487 Sum_probs=43.1
Q ss_pred eeEEEEEEEEecCCCCeEEEEEec----CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 61 RTCVEAVLLVELFKHPHLLLLQVR----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 61 RrsV~aVilvh~~~~phVLLlq~~----~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
+.+|.+|++ ++ .+|||+|+. .|.|.||||.+++||+..+|++||+.||+|+.
T Consensus 203 ~~~v~~vi~-~~---~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~ 258 (341)
T 2qjo_A 203 FITTDAVVV-QA---GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLK 258 (341)
T ss_dssp EEEEEEEEE-ET---TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCS
T ss_pred ceEEEEEEE-eC---CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCc
Confidence 345555554 33 489999986 47899999999999999999999999999993
No 63
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=98.69 E-value=8.1e-08 Score=77.34 Aligned_cols=53 Identities=9% Similarity=0.163 Sum_probs=40.6
Q ss_pred eEEEEEEEEecCCCCeEEEEEe-----------cCCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 62 TCVEAVLLVELFKHPHLLLLQV-----------RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 62 rsV~aVilvh~~~~phVLLlq~-----------~~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
..+++|++++.. ..+|||++. ..+.|.||||+++ ||+..+|++|||.||+|+.
T Consensus 45 ~~av~v~~~~~~-~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~ 108 (191)
T 3o6z_A 45 GNGATILLYNTK-KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYE 108 (191)
T ss_dssp CCEEEEEEEETT-TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CC
T ss_pred CCEEEEEEEECC-CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCc
Confidence 344555555532 348888865 3468999999999 9999999999999999994
No 64
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=98.69 E-value=4.9e-08 Score=80.26 Aligned_cols=64 Identities=23% Similarity=0.303 Sum_probs=49.6
Q ss_pred hhhccCCCeeEEEEEEEEec--------CCCCeEEEEEecCCeeecCCcccCCCC-ChHHHHHHHHHHHhCCC
Q 029260 53 SNYDAHGLRTCVEAVLLVEL--------FKHPHLLLLQVRNSIFKLPGGRLRPGE-SDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 53 ~~y~~~GmRrsV~aVilvh~--------~~~phVLLlq~~~~~~~LPGGrl~~gE-~~~e~LkReL~EeLg~~ 116 (196)
+.....+.++++.+++.... ....+|||.|+..|.|.||||++++|| +..+|++|||.||+|+.
T Consensus 25 ~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~ 97 (212)
T 1u20_A 25 ESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPA 97 (212)
T ss_dssp HHHSCSSCEEEEEEEEEEECCCEETTTEECCEEEEEEEETTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGG
T ss_pred HHhhcCCCcccceEEEeCCCceEEEEEEecCCEEEEEEeCCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCC
Confidence 33343456777777665421 123478888887899999999999999 99999999999999984
No 65
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.68 E-value=9.1e-09 Score=86.62 Aligned_cols=64 Identities=20% Similarity=0.472 Sum_probs=49.4
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecC--------Ceeec-CCcccCCCCC--h----HHHHHHHHHHHhCCCCCCCccce
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRN--------SIFKL-PGGRLRPGES--D----IYGLKRKLTRKLSLNEDGGEVDW 124 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~--------~~~~L-PGGrl~~gE~--~----~e~LkReL~EeLg~~~~~~~~~w 124 (196)
.+..|.+++|.++ -.|||+||.. +.|.+ |||++++||+ + ++|++|||.||+|+ +.
T Consensus 66 ~~q~i~~~II~~~---grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl-------~v 135 (211)
T 3e57_A 66 TKQVIPYVVIMDG---DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDV-------SL 135 (211)
T ss_dssp EEEEEEEEEEEET---TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEE-------EE
T ss_pred ccceEEEEEEEEC---CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCC-------ee
Confidence 3566666666554 3899999953 47888 9999999999 6 99999999999999 57
Q ss_pred EEeeeeeee
Q 029260 125 EVGECLGMW 133 (196)
Q Consensus 125 ~Vge~lg~W 133 (196)
+...++|..
T Consensus 136 ~~~~~ig~~ 144 (211)
T 3e57_A 136 RELEFLGLI 144 (211)
T ss_dssp EEEEEEEEE
T ss_pred eccEEEEEE
Confidence 778888874
No 66
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=98.68 E-value=2.5e-08 Score=86.05 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=48.5
Q ss_pred EEEEEEEEecCCCCeEEEEEec---CCeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeeee
Q 029260 63 CVEAVLLVELFKHPHLLLLQVR---NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (196)
Q Consensus 63 sV~aVilvh~~~~phVLLlq~~---~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~W 133 (196)
.+.+++++.+. .+|||.|+. .|.|.||||.+++||+.++|+.||+.||+|+ .....++++..
T Consensus 140 ~~~viv~v~~~--~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl-------~v~~~~~~~~~ 204 (269)
T 1vk6_A 140 APCIIVAIRRD--DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGI-------KVKNLRYVTSQ 204 (269)
T ss_dssp EEEEEEEEEET--TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCC-------EEEEEEEEEEE
T ss_pred CcEEEEEEEeC--CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCc-------eeeeEEEEEEE
Confidence 34444444433 489999986 3899999999999999999999999999999 45556666653
No 67
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.68 E-value=3.4e-08 Score=85.24 Aligned_cols=41 Identities=29% Similarity=0.528 Sum_probs=37.9
Q ss_pred CeEEEEEecC----CeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 76 PHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 76 phVLLlq~~~----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
.+|||+|+.. |.|.||||++++||+.++|++||+.||+|+.
T Consensus 219 ~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~ 263 (352)
T 2qjt_B 219 DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNIN 263 (352)
T ss_dssp TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCS
T ss_pred CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCC
Confidence 4899999863 7999999999999999999999999999993
No 68
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.59 E-value=7.2e-08 Score=83.66 Aligned_cols=42 Identities=21% Similarity=0.366 Sum_probs=38.4
Q ss_pred CCeEEEEEec-CCeeecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 75 HPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 75 ~phVLLlq~~-~~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
..+|||+|+. .|.|.||||.+++||+..+|++|||.||+|+.
T Consensus 138 ~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~ 180 (292)
T 1q33_A 138 ILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNS 180 (292)
T ss_dssp CEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCG
T ss_pred ceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCc
Confidence 3579999986 58999999999999999999999999999983
No 69
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.52 E-value=4.5e-08 Score=87.16 Aligned_cols=49 Identities=12% Similarity=0.192 Sum_probs=41.7
Q ss_pred CeEEEEEecC-----CeeecCCcccCCCCChHHHHHHHHHHHhCCCCCCCccceEEeeeeee
Q 029260 76 PHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (196)
Q Consensus 76 phVLLlq~~~-----~~~~LPGGrl~~gE~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~ 132 (196)
-+|||.|+.+ |.|.||||++++| ++.+++.||+.||+|+ +..+.+.++.
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl-------~v~~~~~l~~ 305 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGL-------QVELTEPIVS 305 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSC-------CEEECCCCCE
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCC-------ceeeeccccc
Confidence 4899999873 7899999999999 9999999999999998 4555555554
No 70
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.50 E-value=4.2e-08 Score=83.13 Aligned_cols=113 Identities=24% Similarity=0.266 Sum_probs=74.2
Q ss_pred CCCeeEEEEEEEEecCC-------CCeEEEEEec-CCeeecCCcccCCCC-ChHHHHHHHHHHHhCCCCCCCccceEEee
Q 029260 58 HGLRTCVEAVLLVELFK-------HPHLLLLQVR-NSIFKLPGGRLRPGE-SDIYGLKRKLTRKLSLNEDGGEVDWEVGE 128 (196)
Q Consensus 58 ~GmRrsV~aVilvh~~~-------~phVLLlq~~-~~~~~LPGGrl~~gE-~~~e~LkReL~EeLg~~~~~~~~~w~Vge 128 (196)
.|-|+++.+.+-+.+.+ .-+.+|+|.+ +|.|.||||++++|| +.++||.|||.||+|+. ..+..+
T Consensus 18 ~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~------~V~~~~ 91 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCL------RLTEAD 91 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---------CCCGGG
T ss_pred cCccEeeEEEEEcCCccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCe------eeeeee
Confidence 46799999998876432 1355777776 699999999999999 99999999999999962 122233
Q ss_pred eeeeeeccCCCcCCCCCCCCCCCCceeeeEEEEEEcCCceEEeeC------C-----CCeEEecccceeecCc
Q 029260 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP------K-----NLKLLAVPLCQIHENH 190 (196)
Q Consensus 129 ~lg~WwRp~Fet~~yPYlP~Hit~pKE~~klylV~Lpe~~~f~vP------k-----n~kL~AvPLfelydN~ 190 (196)
++..- . .-|| .++ +-..|.+++.+.....+- + ++=++-|||+.+-|..
T Consensus 92 y~~s~----~--~~yp---~~V-----~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D~~ 150 (214)
T 3kvh_A 92 YLSSH----L--TEGP---HRV-----VAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDRV 150 (214)
T ss_dssp EEEEE----E--C-------CE-----EEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTTSS
T ss_pred eEEEE----e--ccCC---CEE-----EEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEeccCC
Confidence 33221 1 1233 244 346888888765533221 2 3458899999998764
No 71
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.46 E-value=1.2e-07 Score=78.94 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=61.7
Q ss_pred eEEEEEecCCeeecCCcccCCCC-ChHHHHHHHHHHHhCCCCCCCccceEEeeeeeeeeccCCCcCCCCCCCCCCCCcee
Q 029260 77 HLLLLQVRNSIFKLPGGRLRPGE-SDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKE 155 (196)
Q Consensus 77 hVLLlq~~~~~~~LPGGrl~~gE-~~~e~LkReL~EeLg~~~~~~~~~w~Vge~lg~WwRp~Fet~~yPYlP~Hit~pKE 155 (196)
.+||+++..+.|.||||++++|| +..+|++|||.||+|+.... ..+. .+..+... |. ..+.+
T Consensus 66 ~~ll~~r~~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~--~~l~---~l~~~~~~-------~~-----~~~~~ 128 (217)
T 2xsq_A 66 AILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAA--FRVE---RTDYRSSH-------VG-----SGPRV 128 (217)
T ss_dssp EEEEEEETTSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGG--CCCC---GGGEEEEE-------EC-----SSSSE
T ss_pred cEEEEEccCCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCcc--ceeE---EEEEEeec-------CC-----CCCeE
Confidence 56777777899999999999999 99999999999999984210 0111 11111110 00 11355
Q ss_pred eeEEEEEEcCCceEEe--------e---CCCCeEEecccceeecC
Q 029260 156 CTKLFLVKLPVSQKFF--------V---PKNLKLLAVPLCQIHEN 189 (196)
Q Consensus 156 ~~klylV~Lpe~~~f~--------v---Pkn~kL~AvPLfelydN 189 (196)
+.-+|...++...... . +.-+.+..|||=+|.|.
T Consensus 129 ~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~ 173 (217)
T 2xsq_A 129 VAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDG 173 (217)
T ss_dssp EEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhhhc
Confidence 6777888886543210 0 12267778999988754
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.39 E-value=1.7e-07 Score=79.49 Aligned_cols=57 Identities=14% Similarity=0.314 Sum_probs=46.8
Q ss_pred CeeEEEEEEEEecCCC-CeEEEEEecC------CeeecCCcccCCCCCh--------------------HHHHHHHHHHH
Q 029260 60 LRTCVEAVLLVELFKH-PHLLLLQVRN------SIFKLPGGRLRPGESD--------------------IYGLKRKLTRK 112 (196)
Q Consensus 60 mRrsV~aVilvh~~~~-phVLLlq~~~------~~~~LPGGrl~~gE~~--------------------~e~LkReL~Ee 112 (196)
.|.++..|++.+..+. ++|||+||.. |.|.||||++++||++ .+|..||+.||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 4677766666554333 8999999973 6899999999999986 89999999999
Q ss_pred hCCC
Q 029260 113 LSLN 116 (196)
Q Consensus 113 Lg~~ 116 (196)
+|+.
T Consensus 87 ~Gl~ 90 (232)
T 3qsj_A 87 IGWL 90 (232)
T ss_dssp HSCC
T ss_pred hCce
Confidence 9984
No 73
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.33 E-value=5.1e-07 Score=75.42 Aligned_cols=32 Identities=13% Similarity=-0.024 Sum_probs=29.9
Q ss_pred CCeeecCCcccCC-CCChHHHHHHHHHHHhCCC
Q 029260 85 NSIFKLPGGRLRP-GESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 85 ~~~~~LPGGrl~~-gE~~~e~LkReL~EeLg~~ 116 (196)
.+.|.||||.+++ ||++.+|++|||.||+|+.
T Consensus 94 ~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~ 126 (218)
T 3q91_A 94 GVTVELCAGLVDQPGLSLEEVACKEAWEECGYH 126 (218)
T ss_dssp CEEEECEEEECCSSSCCHHHHHHHHHHHHHCBC
T ss_pred CeEEECCcceeCCCCCCHHHHHHHHHHHHhCCc
Confidence 3589999999999 9999999999999999994
No 74
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.23 E-value=5.5e-06 Score=69.71 Aligned_cols=58 Identities=21% Similarity=0.218 Sum_probs=46.7
Q ss_pred cCCCeeEEEEEEEEecCCCCeEEEEEecC------CeeecC-CcccCCC------CCh---HHHHHHHHHHHhCCC
Q 029260 57 AHGLRTCVEAVLLVELFKHPHLLLLQVRN------SIFKLP-GGRLRPG------ESD---IYGLKRKLTRKLSLN 116 (196)
Q Consensus 57 ~~GmRrsV~aVilvh~~~~phVLLlq~~~------~~~~LP-GGrl~~g------E~~---~e~LkReL~EeLg~~ 116 (196)
+.|+.+.+.+|+++...+ .|||.||.. |.|.+| ||.+++| |++ .+|++|||.||+|+.
T Consensus 54 ~~g~~h~av~v~v~~~~g--~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~ 127 (235)
T 2dho_A 54 EKGLLHRAFSVFLFNTEN--KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIP 127 (235)
T ss_dssp TTTCCEEEEEEEEECTTC--CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCC
T ss_pred CCCceEEEEEEEEEcCCC--EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCC
Confidence 458877777777775443 788877752 689999 5999999 775 899999999999994
No 75
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.15 E-value=2.9e-06 Score=72.00 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=47.3
Q ss_pred cCCCeeEEEEEEEEecCCCCeEEEEEecC------CeeecCC-cccCCC------CCh---HHHHHHHHHHHhCCCC
Q 029260 57 AHGLRTCVEAVLLVELFKHPHLLLLQVRN------SIFKLPG-GRLRPG------ESD---IYGLKRKLTRKLSLNE 117 (196)
Q Consensus 57 ~~GmRrsV~aVilvh~~~~phVLLlq~~~------~~~~LPG-Grl~~g------E~~---~e~LkReL~EeLg~~~ 117 (196)
+.|+.+.+.+|++.+..+ .|||.||.. |.|.+|+ |.+++| |+. .+|++|||.||+|+..
T Consensus 65 ~~g~~h~av~v~v~~~~g--~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~ 139 (246)
T 2pny_A 65 EKGLLHRAFSVVLFNTKN--RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPG 139 (246)
T ss_dssp TTTCCEEEEEEEEECTTC--CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCT
T ss_pred CCCcEEEEEEEEEEeCCC--EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCc
Confidence 458877777877765443 788877752 6899995 999999 887 8999999999999953
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=97.80 E-value=2.6e-05 Score=69.03 Aligned_cols=63 Identities=13% Similarity=0.093 Sum_probs=47.7
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHHHHHHHHHh-CCCCCCCccceEEeeeeeeeeccC
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL-SLNEDGGEVDWEVGECLGMWWKPD 137 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~LkReL~EeL-g~~~~~~~~~w~Vge~lg~WwRp~ 137 (196)
.+. ++++|+.++. +|||. ..+| |.||||.+ ||++.++..||..||. |. +.+++..++.|=.+.
T Consensus 182 p~~-~vgaii~~~g---~vLL~-~~~G-W~LPG~~~--~~~~~~~a~RE~~EEttGl-------~v~~~~L~~v~~~~~ 245 (321)
T 3rh7_A 182 GEI-RLGAVLEQQG---AVFLA-GNET-LSLPNCTV--EGGDPARTLAAYLEQLTGL-------NVTIGFLYSVYEDKS 245 (321)
T ss_dssp SCE-EEEEEEESSS---CEEEB-CSSE-EBCCEEEE--SSSCHHHHHHHHHHHHHSS-------CEEEEEEEEEEECTT
T ss_pred Ccc-eEEEEEEECC---EEEEe-eCCC-ccCCcccC--CCChhHHHHHHHHHHhcCC-------EEeeceEEEEEEcCC
Confidence 444 5577766553 78888 5578 99999866 4555569999999998 99 799999999875443
No 77
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=97.73 E-value=5.4e-05 Score=66.58 Aligned_cols=59 Identities=17% Similarity=0.069 Sum_probs=45.8
Q ss_pred CCCe-eEEEEEEEEecCCCCeEEEEEecC------Cee-ecCCcccCCCCChHHHHHHHHHHHhCCC
Q 029260 58 HGLR-TCVEAVLLVELFKHPHLLLLQVRN------SIF-KLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (196)
Q Consensus 58 ~GmR-rsV~aVilvh~~~~phVLLlq~~~------~~~-~LPGGrl~~gE~~~e~LkReL~EeLg~~ 116 (196)
.|++ ++|...+++.+.+..++|+-||.. |.| .++||.+++||+..+|+.||+.||+|+.
T Consensus 114 ~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~ 180 (300)
T 3dup_A 114 FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLP 180 (300)
T ss_dssp GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCC
T ss_pred cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 4664 444555555444455888888763 788 6999999999999999999999999995
No 78
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=27.83 E-value=13 Score=28.25 Aligned_cols=49 Identities=22% Similarity=0.306 Sum_probs=31.6
Q ss_pred CeeEEEEEEEEecCCCCeEEEEEecCCeeecCCcccCCCCChHHHH--HHHHHHHhCCCCCCCccceEEee
Q 029260 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGL--KRKLTRKLSLNEDGGEVDWEVGE 128 (196)
Q Consensus 60 mRrsV~aVilvh~~~~phVLLlq~~~~~~~LPGGrl~~gE~~~e~L--kReL~EeLg~~~~~~~~~w~Vge 128 (196)
++..+.+||++|.| |+|-.+|.+.+++-- .++..+-+|+ .+-+.+.||+
T Consensus 64 l~~~A~~vIl~HNH-----------------PSG~~~PS~~D~~~T~~l~~a~~ll~I---~llDHiIig~ 114 (126)
T 2qlc_A 64 IRESAHSIILVHNH-----------------PSGDVQPSNADKQVTSILKKAGDLLQI---ELLDHVIVGN 114 (126)
T ss_dssp HHTTCSEEEEEEEC-----------------SSSCCSCCHHHHHHHHHHHHHHHHHTC---EEEEEEEECS
T ss_pred HHcCCcEEEEEecC-----------------CCCCCCCCHHHHHHHHHHHHHHHHCCC---eEeeeEEEeC
Confidence 45567899999987 889999988776633 2233445555 1223455553
No 79
>4fp5_D LT-IIB, heat-labIle enterotoxin IIB, B chain; B pentamer LT-IIB S74A mutant; 1.40A {Escherichia coli} PDB: 1qb5_D 1qcb_D 1tii_D 4fnf_D 4fo2_D
Probab=22.60 E-value=2.2e+02 Score=20.59 Aligned_cols=48 Identities=15% Similarity=0.233 Sum_probs=32.0
Q ss_pred HHHhhhccCCCeeEEEEEEEEe-----cCCCCeEEEEEecCCeeecCCcccCCC
Q 029260 50 RMKSNYDAHGLRTCVEAVLLVE-----LFKHPHLLLLQVRNSIFKLPGGRLRPG 98 (196)
Q Consensus 50 rl~~~y~~~GmRrsV~aVilvh-----~~~~phVLLlq~~~~~~~LPGGrl~~g 98 (196)
.+++.+++. .--.|+||-|.. ..+.-.+-++....|.|.+||||=-|.
T Consensus 5 ~f~~~cn~t-ta~~v~gv~l~kyi~din~nt~g~yvvs~tggvw~i~~~~dypd 57 (98)
T 4fp5_D 5 FFKDNCNRT-TASLVEGVELTKYISDINNNTDGMYVVSSTGGVWRISRAKDYPD 57 (98)
T ss_dssp HHHHHHHTS-SSEEEEEEEEEEEEEECSTTTCEEEEEETTCCEEEECCCSSTTH
T ss_pred HHHhhhccc-HHHHHhhhhhhhhhhhccCCCccEEEEecCCcEEEecCCCCCCh
Confidence 355666643 234567776542 345567777777789999999986664
No 80
>1qb5_D Protein (heat labIle enterotoxin type IIB B- pentamer); 1.90A {Escherichia coli} SCOP: b.40.2.1 PDB: 1qcb_D 1tii_D
Probab=21.59 E-value=2.2e+02 Score=20.62 Aligned_cols=48 Identities=15% Similarity=0.233 Sum_probs=31.4
Q ss_pred HHHhhhccCCCeeEEEEEEEEe-----cCCCCeEEEEEecCCeeecCCcccCCC
Q 029260 50 RMKSNYDAHGLRTCVEAVLLVE-----LFKHPHLLLLQVRNSIFKLPGGRLRPG 98 (196)
Q Consensus 50 rl~~~y~~~GmRrsV~aVilvh-----~~~~phVLLlq~~~~~~~LPGGrl~~g 98 (196)
.+++.+++. .--.|+||-|.. ..+.-.+-++....|.|.+||||=-|.
T Consensus 5 ~f~~~cn~t-ta~~v~gv~l~kyi~din~nt~g~yvvs~tggvw~i~~~~dypd 57 (99)
T 1qb5_D 5 FFKDNCNRT-TASLVEGVELTKYISDINNNTDGMYVVSSTGGVWRISRAKDYPD 57 (99)
T ss_dssp HHHHHHHTS-SSEEEEEECEEEEEEECSTTTCEEEEEETTSCEEEECCCSSTTH
T ss_pred HHHhhhccc-HHHHHhhhhhhhhhhhccCCCccEEEEecCCcEEEecCCCCCCh
Confidence 345666643 234566665541 345567777777789999999986664
No 81
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=20.14 E-value=61 Score=22.55 Aligned_cols=27 Identities=15% Similarity=0.251 Sum_probs=19.5
Q ss_pred CCCCeEEEE-EecCCeeecCCcccCCCC
Q 029260 73 FKHPHLLLL-QVRNSIFKLPGGRLRPGE 99 (196)
Q Consensus 73 ~~~phVLLl-q~~~~~~~LPGGrl~~gE 99 (196)
.+.|.++++ +.+.-.+...||++..+.
T Consensus 90 ~~~Pt~~~~d~~G~~~~~~~g~~~~~~~ 117 (133)
T 3fk8_A 90 DGIPAVVVVNSDGKVRYTTKGGELANAR 117 (133)
T ss_dssp GCSSEEEEECTTSCEEEECCSCTTTTGG
T ss_pred CccceEEEECCCCCEEEEecCCcccccc
Confidence 567898888 555556788888887543
Done!